View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11750_low_8 (Length: 568)

Name: NF11750_low_8
Description: NF11750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11750_low_8
NF11750_low_8
[»] chr4 (40 HSPs)
chr4 (18-527)||(27581260-27581769)
chr4 (523-568)||(54189537-54189582)
chr4 (528-568)||(38055154-38055194)
chr4 (526-568)||(14987787-14987829)
chr4 (526-568)||(44785073-44785115)
chr4 (526-568)||(45424690-45424732)
chr4 (527-568)||(2481564-2481605)
chr4 (527-568)||(50055257-50055298)
chr4 (528-568)||(6688777-6688817)
chr4 (528-568)||(19913786-19913826)
chr4 (528-568)||(23776615-23776655)
chr4 (526-568)||(8932334-8932376)
chr4 (526-568)||(20877042-20877084)
chr4 (526-568)||(23265913-23265955)
chr4 (534-568)||(28360433-28360467)
chr4 (530-568)||(54412627-54412665)
chr4 (527-565)||(55344984-55345022)
chr4 (527-568)||(15669179-15669220)
chr4 (527-568)||(28032868-28032909)
chr4 (527-568)||(37464717-37464758)
chr4 (532-568)||(16700782-16700818)
chr4 (532-568)||(19165128-19165164)
chr4 (527-563)||(53717625-53717661)
chr4 (530-568)||(1756920-1756958)
chr4 (527-565)||(15241187-15241225)
chr4 (526-568)||(30423720-30423762)
chr4 (530-568)||(44375844-44375882)
chr4 (527-565)||(48909842-48909880)
chr4 (526-568)||(50353796-50353838)
chr4 (531-568)||(1617084-1617121)
chr4 (527-564)||(6611520-6611557)
chr4 (527-560)||(27536264-27536297)
chr4 (535-568)||(27583788-27583821)
chr4 (531-568)||(35490929-35490966)
chr4 (527-560)||(50053439-50053472)
chr4 (526-559)||(53353050-53353083)
chr4 (532-568)||(30171581-30171617)
chr4 (540-568)||(38071476-38071504)
chr4 (529-565)||(40428879-40428915)
chr4 (532-568)||(53875658-53875694)
[»] chr8 (21 HSPs)
chr8 (527-568)||(24113334-24113375)
chr8 (526-568)||(6144441-6144483)
chr8 (526-568)||(18594534-18594576)
chr8 (527-565)||(33287196-33287234)
chr8 (527-568)||(39206584-39206625)
chr8 (527-568)||(39218775-39218816)
chr8 (528-568)||(29938060-29938100)
chr8 (528-568)||(35118199-35118239)
chr8 (529-568)||(34842533-34842572)
chr8 (526-565)||(40118023-40118062)
chr8 (526-568)||(26783901-26783943)
chr8 (527-568)||(10836923-10836964)
chr8 (531-568)||(13110406-13110443)
chr8 (527-568)||(22260798-22260839)
chr8 (528-568)||(14422702-14422742)
chr8 (533-568)||(2042692-2042727)
chr8 (528-563)||(5320563-5320598)
chr8 (531-568)||(8021721-8021758)
chr8 (532-564)||(144397-144429)
chr8 (525-565)||(36491153-36491193)
chr8 (533-565)||(42571598-42571630)
[»] chr1 (28 HSPs)
chr1 (527-568)||(29288145-29288186)
chr1 (528-568)||(970694-970734)
chr1 (527-566)||(25897370-25897409)
chr1 (526-568)||(20089466-20089508)
chr1 (527-568)||(1168499-1168540)
chr1 (527-568)||(26580438-26580479)
chr1 (527-568)||(39260514-39260555)
chr1 (527-568)||(52753315-52753356)
chr1 (528-568)||(42370963-42371003)
chr1 (528-568)||(52696788-52696828)
chr1 (530-568)||(5215384-5215422)
chr1 (526-568)||(16052091-16052133)
chr1 (530-568)||(26663257-26663295)
chr1 (526-564)||(32671574-32671612)
chr1 (526-564)||(46409430-46409468)
chr1 (527-568)||(1170612-1170653)
chr1 (527-568)||(1940915-1940956)
chr1 (531-568)||(8079877-8079914)
chr1 (528-568)||(12682817-12682857)
chr1 (528-568)||(51359384-51359424)
chr1 (534-568)||(29078519-29078553)
chr1 (526-568)||(43905649-43905691)
chr1 (527-565)||(52086263-52086301)
chr1 (527-560)||(33510480-33510513)
chr1 (527-564)||(41928667-41928704)
chr1 (526-562)||(5675100-5675136)
chr1 (532-564)||(8120870-8120902)
chr1 (528-560)||(40092488-40092520)
[»] chr7 (29 HSPs)
chr7 (525-568)||(30181182-30181225)
chr7 (526-568)||(4347269-4347311)
chr7 (526-568)||(15655908-15655950)
chr7 (526-568)||(37704976-37705018)
chr7 (526-568)||(42204150-42204192)
chr7 (526-568)||(43068131-43068173)
chr7 (527-568)||(33846682-33846723)
chr7 (528-568)||(33359248-33359288)
chr7 (533-568)||(1803029-1803064)
chr7 (529-568)||(20346487-20346526)
chr7 (526-568)||(3511319-3511361)
chr7 (526-568)||(6394747-6394789)
chr7 (523-565)||(12101339-12101381)
chr7 (526-568)||(42965154-42965196)
chr7 (527-568)||(32041539-32041580)
chr7 (530-563)||(46134467-46134500)
chr7 (532-568)||(4477479-4477515)
chr7 (531-563)||(9452591-9452623)
chr7 (528-568)||(22649852-22649892)
chr7 (532-568)||(42673467-42673503)
chr7 (528-563)||(30075391-30075426)
chr7 (526-568)||(5280856-5280898)
chr7 (530-568)||(7164184-7164222)
chr7 (526-560)||(16894663-16894697)
chr7 (526-568)||(36890988-36891029)
chr7 (526-568)||(43405016-43405058)
chr7 (535-568)||(43156718-43156751)
chr7 (531-560)||(48865641-48865670)
chr7 (533-565)||(38866547-38866579)
[»] chr6 (19 HSPs)
chr6 (526-568)||(3347691-3347733)
chr6 (527-568)||(52834-52875)
chr6 (527-568)||(2837543-2837584)
chr6 (527-568)||(6086767-6086808)
chr6 (527-568)||(16307176-16307217)
chr6 (526-561)||(18613535-18613570)
chr6 (527-568)||(11167238-11167279)
chr6 (531-568)||(17261241-17261278)
chr6 (531-564)||(28199681-28199714)
chr6 (532-565)||(34887463-34887496)
chr6 (528-568)||(20726790-20726830)
chr6 (528-568)||(26947044-26947084)
chr6 (528-568)||(30691850-30691890)
chr6 (530-565)||(3955937-3955972)
chr6 (525-568)||(33463697-33463740)
chr6 (527-565)||(21893453-21893491)
chr6 (527-568)||(35198282-35198323)
chr6 (528-568)||(9459562-9459602)
chr6 (528-568)||(26704507-26704547)
[»] chr5 (20 HSPs)
chr5 (526-568)||(9008225-9008267)
chr5 (526-568)||(35782812-35782854)
chr5 (527-568)||(27679337-27679378)
chr5 (526-565)||(33491367-33491406)
chr5 (526-568)||(16069351-16069393)
chr5 (526-568)||(19358524-19358566)
chr5 (526-568)||(24105839-24105881)
chr5 (526-568)||(27420856-27420898)
chr5 (526-564)||(31883142-31883180)
chr5 (527-568)||(1579035-1579076)
chr5 (527-568)||(1605739-1605780)
chr5 (527-568)||(8374506-8374547)
chr5 (526-565)||(4120935-4120974)
chr5 (528-562)||(5202972-5203006)
chr5 (526-564)||(20992318-20992356)
chr5 (535-568)||(1165769-1165802)
chr5 (527-564)||(33991139-33991176)
chr5 (526-562)||(20992459-20992495)
chr5 (528-560)||(26603108-26603140)
chr5 (536-568)||(33284743-33284775)
[»] chr3 (30 HSPs)
chr3 (526-568)||(15520296-15520338)
chr3 (526-568)||(42308059-42308101)
chr3 (527-568)||(22175144-22175185)
chr3 (528-565)||(25494442-25494479)
chr3 (527-568)||(37698297-37698338)
chr3 (527-568)||(50528922-50528963)
chr3 (527-568)||(53028218-53028259)
chr3 (527-568)||(54534480-54534521)
chr3 (528-568)||(25999382-25999422)
chr3 (529-568)||(20699144-20699183)
chr3 (526-565)||(24366084-24366123)
chr3 (526-568)||(12117812-12117854)
chr3 (527-565)||(15520629-15520667)
chr3 (526-568)||(20842502-20842544)
chr3 (534-568)||(21581042-21581076)
chr3 (529-563)||(35643212-35643246)
chr3 (526-568)||(49128041-49128083)
chr3 (527-564)||(38933939-38933976)
chr3 (527-563)||(29445481-29445517)
chr3 (526-568)||(8042599-8042641)
chr3 (526-564)||(32244112-32244150)
chr3 (526-564)||(32359251-32359289)
chr3 (530-568)||(38856089-38856127)
chr3 (531-561)||(40240485-40240515)
chr3 (538-568)||(42105125-42105155)
chr3 (527-565)||(54870331-54870369)
chr3 (528-565)||(2895179-2895216)
chr3 (527-560)||(24835861-24835894)
chr3 (528-565)||(26122808-26122845)
chr3 (527-568)||(35226440-35226481)
[»] chr2 (15 HSPs)
chr2 (526-568)||(19901305-19901347)
chr2 (531-568)||(28330005-28330042)
chr2 (530-568)||(30420335-30420373)
chr2 (526-568)||(33906215-33906257)
chr2 (527-568)||(4232310-4232351)
chr2 (527-568)||(6174996-6175037)
chr2 (528-568)||(3873412-3873452)
chr2 (528-568)||(31517383-31517423)
chr2 (526-568)||(1108275-1108316)
chr2 (526-564)||(26323358-26323396)
chr2 (527-560)||(18807060-18807093)
chr2 (527-564)||(39635448-39635485)
chr2 (532-568)||(1483070-1483106)
chr2 (531-563)||(4016039-4016071)
chr2 (527-563)||(42937715-42937751)
[»] scaffold0012 (1 HSPs)
scaffold0012 (527-568)||(36701-36742)
[»] scaffold0172 (1 HSPs)
scaffold0172 (526-565)||(10233-10272)
[»] scaffold0038 (1 HSPs)
scaffold0038 (531-564)||(179-212)
[»] scaffold0167 (1 HSPs)
scaffold0167 (528-568)||(23119-23159)
[»] scaffold0018 (1 HSPs)
scaffold0018 (531-564)||(145417-145450)


Alignment Details
Target: chr4 (Bit Score: 473; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 18 - 527
Target Start/End: Complemental strand, 27581769 - 27581260
Alignment:
Q  18 acatttacattatttgcatgatatgccgcaaaaagtgtattattttaccttttcccatgctgcttctcttcgtttacgaatgaccatgagaagagaagga 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27581769 acatttacattatttgcatgatctgccgcaaaaagtgtattattttaccttttcccatgctgcttctcttcgtttacgaatgacaatgagaagagaagga 27581670  T
Q  118 atgctatgaataaaataacatttggagtattagtttcattcatctaaaagcaattaaatagtaattcaccttaaaagnnnnnnnttaatgacaaaaatca 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  27581669 atgctatgaataaaataacatttggagtattagtttcattcatctaaaagcaattaaatagtaattcaccttaaaagaaaaaaattaatgacaaaaatca 27581570  T
Q  218 accattgaaacgataattactcacttcaaaagagtgagatatacacgatcttatttttctcacatatcatatacatcaaatacaaattagtgtggtatat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27581569 accattgaaacgataattactcacttcaaaagagtgagatatacacgatcttatttttctcacatatcatatacatcaaatacaaattagtgtggtatat 27581470  T
Q  318 atatacttatgagacattgaaacgagaagtaagagtaacaaaatagtcaatggaacatggaataacaatatttcccattgggtgttcaaaaccaaactct 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27581469 atatacttatgagacattgaaacgagaagtaagagtaacaaaatagtcaatggaacatggaataacaatatttcccattggatgttcaaaaccaaactct 27581370  T
Q  418 tcctcagcacaacacaacaaggcctgaaacataggttgcttcaagtacgatattgggaccacaaaccgcctcatatattcatcatctttatcatccacgt 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27581369 tcctcagcacaacacaacaaggcctgaaacataggttgcttcaagtacgatattgggaccacaaaccgcctcatatattcatcatccttatcatccacgt 27581270  T
Q  518 acaccacaaa 527  Q
    ||||||||||    
T  27581269 acaccacaaa 27581260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 523 - 568
Target Start/End: Original strand, 54189537 - 54189582
Alignment:
Q  523 acaaaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  54189537 acaaaggccccgtttggattggcttattttgagcttatgtgggctt 54189582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 38055154 - 38055194
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38055154 ggccccgtttggattgacttattttgagcttatgtgggctt 38055194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 14987787 - 14987829
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  14987787 aaggccccgtttggattggcttattttgagcttatgtgggctt 14987829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 44785115 - 44785073
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  44785115 aaggccccgtttggattggcttattttgagcttatgtgggctt 44785073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 45424732 - 45424690
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  45424732 aaggccccgtttggattgacttattttgagcttatgttggctt 45424690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 2481605 - 2481564
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  2481605 aggccccgtttggattggcttattttgagcttatgtgggctt 2481564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 50055298 - 50055257
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  50055298 aggccccgtttggattggcttattttgagcttatgtgggctt 50055257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 6688817 - 6688777
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  6688817 ggccccgtttggattgacttattttgagtttatgtgggctt 6688777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 19913826 - 19913786
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  19913826 ggccccgtttggattggcttattttgagcttatgtgggctt 19913786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 23776655 - 23776615
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23776655 ggccccgtttggattggcttattttgagcttatgtgggctt 23776615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 8932376 - 8932334
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  8932376 aaggccccgtttggattggcttattttgagcttatgcgggctt 8932334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 20877042 - 20877084
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  20877042 aaggtcccgtttggattggcttattttgagcttatgtgggctt 20877084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 23265955 - 23265913
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  23265955 aaggtcccgtttggattggcttattttgagcttatgtgggctt 23265913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 534 - 568
Target Start/End: Original strand, 28360433 - 28360467
Alignment:
Q  534 gtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||    
T  28360433 gtttggattgacttattttgagcttatgtgggctt 28360467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 54412627 - 54412665
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  54412627 ccccgtttggattggcttattttgagcttatgtgggctt 54412665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 55345022 - 55344984
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  55345022 aggccccgtttgaattgacttattttgagcttatgtggg 55344984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 15669179 - 15669220
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  15669179 aggccccgtttggattggcttattttgagcttatgtgagctt 15669220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 28032909 - 28032868
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  28032909 aggccctgtttagattgacttattttgagcttatgtgggctt 28032868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 37464717 - 37464758
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  37464717 aggccccgtttgaattggcttattttgagcttatgtgggctt 37464758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Original strand, 16700782 - 16700818
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16700782 ccgtttggattggcttattttgagcttatgtgggctt 16700818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Complemental strand, 19165164 - 19165128
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| ||||||||||||||||||||||||    
T  19165164 ccgtttggattggcttattttgagcttatgtgggctt 19165128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 563
Target Start/End: Complemental strand, 53717661 - 53717625
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtg 563  Q
    ||||||||||||||||| |||||||||||||||||||    
T  53717661 aggccccgtttggattggcttattttgagcttatgtg 53717625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Complemental strand, 1756958 - 1756920
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  1756958 ccccgtttggattggcttattttgagcttatatgggctt 1756920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 15241225 - 15241187
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  15241225 aggcctcgtttggattggcttattttgagcttatgtggg 15241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 30423762 - 30423720
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||    
T  30423762 aaggtcccgtttggattggcttattttgagtttatgtgggctt 30423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 44375844 - 44375882
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  44375844 ccccgtttggattggcttattttaagcttatgtgggctt 44375882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 48909842 - 48909880
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  48909842 aggccctgtttggattggcttattttgagcttatgtggg 48909880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 50353796 - 50353838
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| |||||||||||||| |||| ||||    
T  50353796 aaggccccgtttggattggcttattttgagcttctgtgagctt 50353838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 1617084 - 1617121
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  1617084 cccgtttggattggcttattttgagcttatgtgagctt 1617121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 564
Target Start/End: Complemental strand, 6611557 - 6611520
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgg 564  Q
    |||||||||||||||||  |||||||||||||||||||    
T  6611557 aggccccgtttggattggtttattttgagcttatgtgg 6611520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Complemental strand, 27536297 - 27536264
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttat 560  Q
    ||||||||||||||||| ||||||||||||||||    
T  27536297 aggccccgtttggattggcttattttgagcttat 27536264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 27583821 - 27583788
Alignment:
Q  535 tttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||| |||||    
T  27583821 tttggattgacttattttgagcttatgtaggctt 27583788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 35490966 - 35490929
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  35490966 cccgtttggattggcttattttgagcttatatgggctt 35490929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Original strand, 50053439 - 50053472
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttat 560  Q
    ||||||||||||||||| ||||||||||||||||    
T  50053439 aggccccgtttggattggcttattttgagcttat 50053472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 559
Target Start/End: Original strand, 53353050 - 53353083
Alignment:
Q  526 aaggccccgtttggattgacttattttgagctta 559  Q
    |||||||||||||||||| |||||||||||||||    
T  53353050 aaggccccgtttggattggcttattttgagctta 53353083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 568
Target Start/End: Original strand, 30171581 - 30171617
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  30171581 ccgtttggattggcttattttgagcttatgtgagctt 30171617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 540 - 568
Target Start/End: Complemental strand, 38071504 - 38071476
Alignment:
Q  540 attgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||    
T  38071504 attgacttattttgagcttatgtgggctt 38071476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 529 - 565
Target Start/End: Complemental strand, 40428915 - 40428879
Alignment:
Q  529 gccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||| |||| |||||||||||||||||||||    
T  40428915 gccccgtttgaattggcttattttgagcttatgtggg 40428879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 568
Target Start/End: Original strand, 53875658 - 53875694
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| |||||||| |||||||||||||||    
T  53875658 ccgtttggattggcttattttaagcttatgtgggctt 53875694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 24113375 - 24113334
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24113375 aggccccgtttggattgacttattttgagcttatgtgggctt 24113334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 6144483 - 6144441
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  6144483 aaggccccgtttggattgacttattttgagcttatatgggctt 6144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 18594534 - 18594576
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  18594534 aaggccccgtttggattggcttattttgagcttatgtgggctt 18594576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 33287234 - 33287196
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33287234 aggccccgtttggattgacttattttgagcttatgtggg 33287196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 39206584 - 39206625
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  39206584 aggccccgtttggattggcttattttgagcttatgtgggctt 39206625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 39218775 - 39218816
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  39218775 aggccccgtttggattggcttattttgagcttatgtgggctt 39218816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 29938060 - 29938100
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29938060 ggccccgtttggattggcttattttgagcttatgtgggctt 29938100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 35118239 - 35118199
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  35118239 ggccccgtttggattggcttattttgagcttatgtgggctt 35118199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 529 - 568
Target Start/End: Complemental strand, 34842572 - 34842533
Alignment:
Q  529 gccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  34842572 gccccgtttggattggcttattttgagcttatgtgggctt 34842533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 526 - 565
Target Start/End: Complemental strand, 40118062 - 40118023
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  40118062 aaggccccgtttggattggcttattttgagcttatgtggg 40118023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 26783943 - 26783901
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  26783943 aaggcctcgtttggattggcttattttgagcttatgtgggctt 26783901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 10836964 - 10836923
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  10836964 aggcctcgtttggattggcttattttgagcttatgtgggctt 10836923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 13110406 - 13110443
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13110406 cccgtttggattggcttattttgagcttatgtgggctt 13110443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 22260839 - 22260798
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  22260839 aggccccgtttggattggcttattttgagcttatgtgagctt 22260798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 14422702 - 14422742
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  14422702 ggccccgtttggattggtttattttgagcttatgtgggctt 14422742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 533 - 568
Target Start/End: Complemental strand, 2042727 - 2042692
Alignment:
Q  533 cgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||| ||||||||||||||||||||||||    
T  2042727 cgtttggattggcttattttgagcttatgtgggctt 2042692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 563
Target Start/End: Original strand, 5320563 - 5320598
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtg 563  Q
    |||||||||||||||| |||||||||||||||||||    
T  5320563 ggccccgtttggattggcttattttgagcttatgtg 5320598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 8021721 - 8021758
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  8021721 cccgtttggattggcttattttgagcttatatgggctt 8021758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 564
Target Start/End: Original strand, 144397 - 144429
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||||||||||| |||||||    
T  144397 ccgtttggattgacttattttgagcatatgtgg 144429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 565
Target Start/End: Original strand, 36491153 - 36491193
Alignment:
Q  525 aaaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||| ||||||||| |||||||| ||||||||||||    
T  36491153 aaaggccccatttggattggcttattttaagcttatgtggg 36491193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 565
Target Start/End: Original strand, 42571598 - 42571630
Alignment:
Q  533 cgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||| |||||||||||||||||||||    
T  42571598 cgtttggattggcttattttgagcttatgtggg 42571630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 29288145 - 29288186
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29288145 aggccccgtttggattgacttattttgagcttatgtgggctt 29288186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 970734 - 970694
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  970734 ggccccgtttggattgacttattttgagcttatgtgggctt 970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 566
Target Start/End: Original strand, 25897370 - 25897409
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggc 566  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25897370 aggccccgtttggattgacttattttgagcttatgtgggc 25897409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 20089466 - 20089508
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  20089466 aaggccccgtttggattggcttattttgagcttatgtgggctt 20089508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 1168499 - 1168540
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1168499 aggccccgtttggattggcttattttgagcttatgtgggctt 1168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 26580479 - 26580438
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  26580479 aggccccgtttggattggcttattttgagcttatgtgggctt 26580438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 39260555 - 39260514
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  39260555 aggccccgtttggattggcttattttgagcttatgtgggctt 39260514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 52753356 - 52753315
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  52753356 aggccccgtttggattggcttattttgagcttatgtgggctt 52753315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 42371003 - 42370963
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  42371003 ggccccgtttggattgacttattttgagcttatgtgagctt 42370963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 52696788 - 52696828
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  52696788 ggccccgtttggattggcttattttgagcttatgtgggctt 52696828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 5215384 - 5215422
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  5215384 ccccgtttggattggcttattttgagcttatgtgggctt 5215422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 16052091 - 16052133
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  16052091 aaggccccgtttggattggcttattttgagtttatgtgggctt 16052133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 26663257 - 26663295
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  26663257 ccccgtttggattggcttattttgagcttatgtgggctt 26663295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 32671574 - 32671612
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32671574 aaggccccgtttggattggcttattttgagcttatgtgg 32671612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 46409430 - 46409468
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  46409430 aaggctccgtttggattgacttattttgagcttatgtgg 46409468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 1170653 - 1170612
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  1170653 aggccccgtttggattggcttattttgagcttttgtgggctt 1170612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 1940956 - 1940915
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  1940956 aggccccgtttggattggcttattttgagcttatatgggctt 1940915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 8079914 - 8079877
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8079914 cccgtttggattggcttattttgagcttatgtgggctt 8079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 12682817 - 12682857
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  12682817 ggccctgtttggattgacttattttgagtttatgtgggctt 12682857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 51359424 - 51359384
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  51359424 ggccccgtttggattggcttattttgagcttatgcgggctt 51359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 534 - 568
Target Start/End: Original strand, 29078519 - 29078553
Alignment:
Q  534 gtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||| ||||||||||||||||||||||||    
T  29078519 gtttggattggcttattttgagcttatgtgggctt 29078553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 43905649 - 43905691
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||| |||||||||||| |||||||||||||||| |||||||    
T  43905649 aaggctccgtttggattggcttattttgagcttatttgggctt 43905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 52086263 - 52086301
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  52086263 aggccctgtttggattgacttattttaagcttatgtggg 52086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Original strand, 33510480 - 33510513
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttat 560  Q
    ||||||||||||||||| ||||||||||||||||    
T  33510480 aggccccgtttggattggcttattttgagcttat 33510513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 564
Target Start/End: Complemental strand, 41928704 - 41928667
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  41928704 aggccccgtttggattggcttattttgaacttatgtgg 41928667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 562
Target Start/End: Original strand, 5675100 - 5675136
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgt 562  Q
    |||||||||||||||||| |||||||| |||||||||    
T  5675100 aaggccccgtttggattggcttattttaagcttatgt 5675136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 564
Target Start/End: Original strand, 8120870 - 8120902
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgg 564  Q
    |||||||||||| ||||||||||||||||||||    
T  8120870 ccgtttggattggcttattttgagcttatgtgg 8120902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 560
Target Start/End: Original strand, 40092488 - 40092520
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttat 560  Q
    ||||| |||||||||||||||||||||||||||    
T  40092488 ggccctgtttggattgacttattttgagcttat 40092520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 525 - 568
Target Start/End: Complemental strand, 30181225 - 30181182
Alignment:
Q  525 aaaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  30181225 aaaggccccgtttggattggcttattttgagcttatgtgggctt 30181182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 4347269 - 4347311
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  4347269 aaggccccgtttggattgacttattttaagcttatgtgggctt 4347311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 15655908 - 15655950
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  15655908 aaggccccgtttggattggcttattttgagcttatgtgggctt 15655950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 37704976 - 37705018
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  37704976 aaggccccgtttgggttgacttattttgagcttatgtgggctt 37705018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 42204150 - 42204192
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  42204150 aaggccccgtttggattggcttattttgagcttatgtgggctt 42204192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 43068173 - 43068131
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  43068173 aaggccccgtttggattgacttattttgagcttatatgggctt 43068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 33846723 - 33846682
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  33846723 aggccccgtttggattggcttattttgagcttatgtgggctt 33846682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 33359288 - 33359248
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  33359288 ggccccgtttggattggcttattttgagcttatgtgggctt 33359248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 533 - 568
Target Start/End: Original strand, 1803029 - 1803064
Alignment:
Q  533 cgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||||    
T  1803029 cgtttggattgacttattttgagcttatgtgggctt 1803064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 529 - 568
Target Start/End: Original strand, 20346487 - 20346526
Alignment:
Q  529 gccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  20346487 gccccgtttggattggcttattttgagcttatgtgggctt 20346526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 3511319 - 3511361
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  3511319 aaggtcccgtttggattgtcttattttgagcttatgtgggctt 3511361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 6394747 - 6394789
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  6394747 aaggccccgtttagattggcttattttgagcttatgtgggctt 6394789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 565
Target Start/End: Complemental strand, 12101381 - 12101339
Alignment:
Q  523 acaaaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  12101381 acaaaggccccatttggattggcttattttgagcttatgtggg 12101339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 42965196 - 42965154
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  42965196 aaggccccttttggattggcttattttgagcttatgtgggctt 42965154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 32041539 - 32041580
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  32041539 aggccccgtttggattggcttattttgtgcttatgtgggctt 32041580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 530 - 563
Target Start/End: Complemental strand, 46134500 - 46134467
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtg 563  Q
    ||||||||||||||||||||||||||||||||||    
T  46134500 ccccgtttggattgacttattttgagcttatgtg 46134467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Complemental strand, 4477515 - 4477479
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| ||||||||||||||||||||||||    
T  4477515 ccgtttggattggcttattttgagcttatgtgggctt 4477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 531 - 563
Target Start/End: Original strand, 9452591 - 9452623
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtg 563  Q
    |||||||||||||||||||||||||||||||||    
T  9452591 cccgtttggattgacttattttgagcttatgtg 9452623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 22649892 - 22649852
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  22649892 ggccccgtttgaattggcttattttgagcttatgtgggctt 22649852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 532 - 568
Target Start/End: Original strand, 42673467 - 42673503
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||| ||||||||||||||||    
T  42673467 ccgtttggattgacttatttggagcttatgtgggctt 42673503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 563
Target Start/End: Complemental strand, 30075426 - 30075391
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtg 563  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30075426 ggccccgtttggattgacttattttaagcttatgtg 30075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 5280856 - 5280898
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  5280856 aaggtcccgtttggattggcttattttgagcttatgtgagctt 5280898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 7164184 - 7164222
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  7164184 ccccgtttggattggcttattttgagcttatatgggctt 7164222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 560
Target Start/End: Complemental strand, 16894697 - 16894663
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttat 560  Q
    |||||||||||||||||| ||||||||||||||||    
T  16894697 aaggccccgtttggattggcttattttgagcttat 16894663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 36891029 - 36890988
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  36891029 aaggccccgtttggattgactta-tttgagcttatgtaggctt 36890988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 43405016 - 43405058
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| ||||||||||||| ||||||||| |||||    
T  43405016 aaggccccgtttgaattgacttattttaagcttatgttggctt 43405058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Original strand, 43156718 - 43156751
Alignment:
Q  535 tttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||| ||||||||||||||||||||||||    
T  43156718 tttggattggcttattttgagcttatgtgggctt 43156751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 560
Target Start/End: Original strand, 48865641 - 48865670
Alignment:
Q  531 cccgtttggattgacttattttgagcttat 560  Q
    ||||||||||||||||||||||||||||||    
T  48865641 cccgtttggattgacttattttgagcttat 48865670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 565
Target Start/End: Original strand, 38866547 - 38866579
Alignment:
Q  533 cgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||| |||||||||||||||||||||||    
T  38866547 cgtttggatcgacttattttgagcttatgtggg 38866579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 3347733 - 3347691
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  3347733 aaggccccgtttggattggcttattttgagcttatgtgggctt 3347691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 52834 - 52875
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  52834 aggccccgtttggattggcttattttgagcttatgtgggctt 52875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 2837543 - 2837584
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  2837543 aggccccgtttggattggcttattttgagcttatgtgggctt 2837584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 6086808 - 6086767
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  6086808 aggccccgtttggattggcttattttgagcttatgtgggctt 6086767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 16307217 - 16307176
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  16307217 aggccccgtttggattgacttattttgagcttatgttggctt 16307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 526 - 561
Target Start/End: Original strand, 18613535 - 18613570
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatg 561  Q
    ||||||||||||||||||||||||||||||||||||    
T  18613535 aaggccccgtttggattgacttattttgagcttatg 18613570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 11167238 - 11167279
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  11167238 aggccccgtttggattggcttattttgagcttatgtgtgctt 11167279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 17261278 - 17261241
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  17261278 cccgtttggattggcttattttgagcttatgtgggctt 17261241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 564
Target Start/End: Complemental strand, 28199714 - 28199681
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||||||||||||||||||||    
T  28199714 cccgtttggattgacttattttgagcttatgtgg 28199681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 532 - 565
Target Start/End: Complemental strand, 34887496 - 34887463
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  34887496 ccgtttggattgacttattttgagcttatgtggg 34887463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 20726790 - 20726830
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  20726790 ggccccgtttggattggcttattttgagcttatatgggctt 20726830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 26947084 - 26947044
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  26947084 ggccccgtttggattggcttattttgagcttatatgggctt 26947044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 30691850 - 30691890
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  30691850 ggcctcgtttggattggcttattttgagcttatgtgggctt 30691890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 565
Target Start/End: Complemental strand, 3955972 - 3955937
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||||||| |||||||||||||||||||||    
T  3955972 ccccgtttggattggcttattttgagcttatgtggg 3955937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 568
Target Start/End: Original strand, 33463697 - 33463740
Alignment:
Q  525 aaaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  33463697 aaaggtcccgtttggattggcttattttgagcttatgtgagctt 33463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 21893453 - 21893491
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  21893453 aggccccgtttggatcgatttattttgagcttatgtggg 21893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 35198282 - 35198323
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||| |||| |||||||||| |||||||||||||    
T  35198282 aggccccgtttgaattggcttattttgaacttatgtgggctt 35198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 9459562 - 9459602
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||| ||||||| ||||    
T  9459562 ggccccgtttggattggcttattttgagtttatgtgagctt 9459602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 26704547 - 26704507
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||  |||||||||||||| ||||||||    
T  26704547 ggccccgtttggattggtttattttgagcttacgtgggctt 26704507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 9008267 - 9008225
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  9008267 aaggccccgtttggattggcttattttgagcttatgtgggctt 9008225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 35782854 - 35782812
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  35782854 aaggccccgtttggattgccttattttgagcttatgtgggctt 35782812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 27679378 - 27679337
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  27679378 aggccccgtttggattggcttattttgagcttatgtgggctt 27679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 526 - 565
Target Start/End: Complemental strand, 33491406 - 33491367
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  33491406 aaggccccgtttggattggcttattttgagcttatgtggg 33491367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 16069351 - 16069393
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  16069351 aaggtcccgtttggattgacttattttgagcttatgtaggctt 16069393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 19358524 - 19358566
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  19358524 aaggccccgtttggattgccttattttgagcttatgtgagctt 19358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 24105881 - 24105839
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  24105881 aaggctccgtttggattggcttattttgagcttatgtgggctt 24105839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 27420856 - 27420898
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  27420856 aaggccccgtttggattggcttattttgagcttatatgggctt 27420898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 31883142 - 31883180
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  31883142 aaggctccgtttggattgacttattttgagcttatgtgg 31883180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 1579035 - 1579076
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  1579035 aggccccgtttggattggcttattttgagcttatatgggctt 1579076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 1605780 - 1605739
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  1605780 aggccccgtttggattggcttattttgagcttatatgggctt 1605739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 8374547 - 8374506
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  8374547 aggccccgtttggattgccttattttaagcttatgtgggctt 8374506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 4120935 - 4120974
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  4120935 aaggccccgtttggaatggcttattttgagcttatgtggg 4120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 528 - 562
Target Start/End: Original strand, 5202972 - 5203006
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgt 562  Q
    |||||||||||||||||||||||||||| ||||||    
T  5202972 ggccccgtttggattgacttattttgagtttatgt 5203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 20992356 - 20992318
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  20992356 aaggccccgtttgaattggcttattttgagcttatgtgg 20992318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 535 - 568
Target Start/End: Complemental strand, 1165802 - 1165769
Alignment:
Q  535 tttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||| ||||    
T  1165802 tttggattgacttattttgagcttatgtgagctt 1165769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 564
Target Start/End: Original strand, 33991139 - 33991176
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgg 564  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  33991139 aggccccgtttgaattgacttattttgagtttatgtgg 33991176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 562
Target Start/End: Complemental strand, 20992495 - 20992459
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgt 562  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  20992495 aaggccctgtttggattggcttattttgagcttatgt 20992459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 560
Target Start/End: Complemental strand, 26603140 - 26603108
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttat 560  Q
    |||||||||||||||| ||||||||||||||||    
T  26603140 ggccccgtttggattggcttattttgagcttat 26603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 536 - 568
Target Start/End: Complemental strand, 33284775 - 33284743
Alignment:
Q  536 ttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||| |||||||    
T  33284775 ttggattgacttattttgagcttatatgggctt 33284743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 15520338 - 15520296
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  15520338 aaggccccgtttggattggcttattttgagcttatgtgggctt 15520296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 42308101 - 42308059
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  42308101 aaggccccgtttggattggcttattttgagcttatgtgggctt 42308059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 22175185 - 22175144
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  22175185 aggccccgtttggattggcttattttgagcttatgtgggctt 22175144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 528 - 565
Target Start/End: Complemental strand, 25494479 - 25494442
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25494479 ggccccgtttggattgacttattttgagcttatgtggg 25494442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 37698338 - 37698297
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  37698338 aggccccgtttggattggcttattttgagcttatgtgggctt 37698297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 50528922 - 50528963
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  50528922 aggccccgtttggattggcttattttgagcttatgtgggctt 50528963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 53028218 - 53028259
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  53028218 aggccctgtttggattgacttattttgagcttatgtgggctt 53028259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 54534521 - 54534480
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  54534521 aggccccgtttggattggcttattttgagcttatgtgggctt 54534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 568
Target Start/End: Original strand, 25999382 - 25999422
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  25999382 ggccccgtttggattggcttattttgagcttatgtgggctt 25999422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 529 - 568
Target Start/End: Original strand, 20699144 - 20699183
Alignment:
Q  529 gccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  20699144 gccccgtttggattggcttattttgagcttatgtgggctt 20699183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 24366084 - 24366123
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  24366084 aaggccccttttggattgacttattttgagcttatgtggg 24366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 12117854 - 12117812
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  12117854 aaggccccgtttgaattggcttattttgagcttatgtgggctt 12117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 15520629 - 15520667
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  15520629 aggccccgtttggattggcttattttgagcttatgtggg 15520667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 20842544 - 20842502
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  20842544 aaggccccgtttggattggcttattttgagcttatgtgagctt 20842502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 534 - 568
Target Start/End: Original strand, 21581042 - 21581076
Alignment:
Q  534 gtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||||||    
T  21581042 gtttggattgacttattttgagcttatgtgggctt 21581076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 563
Target Start/End: Original strand, 35643212 - 35643246
Alignment:
Q  529 gccccgtttggattgacttattttgagcttatgtg 563  Q
    |||||||||||||||||||||||||||||||||||    
T  35643212 gccccgtttggattgacttattttgagcttatgtg 35643246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 49128041 - 49128083
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  49128041 aaggccccgtttggattgacttattttaaacttatgtgggctt 49128083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 564
Target Start/End: Original strand, 38933939 - 38933976
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  38933939 aggccccgtttggattggcttattttgagcttatgtgg 38933976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 527 - 563
Target Start/End: Original strand, 29445481 - 29445517
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtg 563  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29445481 aggccccgtttggattggcttattttgagcttatgtg 29445517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 8042599 - 8042641
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| | ||||||||||||||||||| ||||    
T  8042599 aaggccccgtttggatgggcttattttgagcttatgtgagctt 8042641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 32244112 - 32244150
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  32244112 aaggtcccgtttggattggcttattttgagcttatgtgg 32244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Original strand, 32359251 - 32359289
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  32359251 aaggtcccgtttggattggcttattttgagcttatgtgg 32359289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 38856089 - 38856127
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  38856089 ccccgtttggattggcttattttgagcttatatgggctt 38856127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 531 - 561
Target Start/End: Original strand, 40240485 - 40240515
Alignment:
Q  531 cccgtttggattgacttattttgagcttatg 561  Q
    |||||||||||||||||||||||||||||||    
T  40240485 cccgtttggattgacttattttgagcttatg 40240515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 538 - 568
Target Start/End: Complemental strand, 42105155 - 42105125
Alignment:
Q  538 ggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||||||||||||||||    
T  42105155 ggattgacttattttgagcttatgtgggctt 42105125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 54870369 - 54870331
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  54870369 aggccccgtttggattggcttattttgagtttatgtggg 54870331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 565
Target Start/End: Original strand, 2895179 - 2895216
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtggg 565  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  2895179 ggccccatttgaattgacttattttgagcttatgtggg 2895216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Complemental strand, 24835894 - 24835861
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttat 560  Q
    |||||||||||||||||| |||||||||||||||    
T  24835894 aggccccgtttggattgatttattttgagcttat 24835861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 565
Target Start/End: Original strand, 26122808 - 26122845
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  26122808 ggcccagtttggattggcttattttgagcttatgtggg 26122845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 35226440 - 35226481
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||| |||||||||| | ||||||||||||||||||||||    
T  35226440 aggccctgtttggattggcctattttgagcttatgtgggctt 35226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 19901347 - 19901305
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  19901347 aaggccccgtttggattggcttattttgagcttatgtgggctt 19901305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 531 - 568
Target Start/End: Complemental strand, 28330042 - 28330005
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28330042 cccgtttggattgacttattttgagcttatgtgggctt 28330005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 568
Target Start/End: Complemental strand, 30420373 - 30420335
Alignment:
Q  530 ccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  30420373 ccccgtttggattggcttattttgagcttatgtgggctt 30420335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 568
Target Start/End: Complemental strand, 33906257 - 33906215
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  33906257 aaggccctgtttggattgacttattttgaacttatgtgggctt 33906215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 4232351 - 4232310
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  4232351 aggccccgtttggattggcttattttgtgcttatgtgggctt 4232310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 527 - 568
Target Start/End: Complemental strand, 6175037 - 6174996
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  6175037 aggccccgtttggattggcttattttgagcttatgtgagctt 6174996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 3873452 - 3873412
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  3873452 ggcctcgtttggattggcttattttgagcttatgtgggctt 3873412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 31517423 - 31517383
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  31517423 ggccccgtttggattggcttattttgagcttatttgggctt 31517383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 568
Target Start/End: Original strand, 1108275 - 1108316
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  1108275 aaggccccgtttggatgg-cttattttgagcttatgtgggctt 1108316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 564
Target Start/End: Complemental strand, 26323396 - 26323358
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  26323396 aaggccccgtttggattggtttattttgagcttatgtgg 26323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 560
Target Start/End: Complemental strand, 18807093 - 18807060
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttat 560  Q
    ||||||||||||||||| ||||||||||||||||    
T  18807093 aggccccgtttggattggcttattttgagcttat 18807060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 564
Target Start/End: Original strand, 39635448 - 39635485
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  39635448 aggccccgtttggattagcttattttgagcttatgtgg 39635485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 532 - 568
Target Start/End: Complemental strand, 1483106 - 1483070
Alignment:
Q  532 ccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  1483106 ccgttttgattggcttattttgagcttatgtgggctt 1483070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 531 - 563
Target Start/End: Original strand, 4016039 - 4016071
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtg 563  Q
    ||||||||||||| |||||||||||||||||||    
T  4016039 cccgtttggattggcttattttgagcttatgtg 4016071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 527 - 563
Target Start/End: Original strand, 42937715 - 42937751
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtg 563  Q
    |||| |||||||||||| |||||||||||||||||||    
T  42937715 aggctccgtttggattggcttattttgagcttatgtg 42937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 527 - 568
Target Start/End: Original strand, 36701 - 36742
Alignment:
Q  527 aggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  36701 aggccccgtttggattggcttattttgagcttatgtgggctt 36742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 526 - 565
Target Start/End: Original strand, 10233 - 10272
Alignment:
Q  526 aaggccccgtttggattgacttattttgagcttatgtggg 565  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  10233 aaggccccgtttggattgacttattttgagcttatatggg 10272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 531 - 564
Target Start/End: Complemental strand, 212 - 179
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||||||||||||||||||||    
T  212 cccgtttggattgacttattttgagcttatgtgg 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 568
Target Start/End: Complemental strand, 23159 - 23119
Alignment:
Q  528 ggccccgtttggattgacttattttgagcttatgtgggctt 568  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  23159 ggccccgtttggattggcttattttgagcttatatgggctt 23119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 564
Target Start/End: Complemental strand, 145450 - 145417
Alignment:
Q  531 cccgtttggattgacttattttgagcttatgtgg 564  Q
    ||||||||||||||||||||||||| ||||||||    
T  145450 cccgtttggattgacttattttgagtttatgtgg 145417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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