View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11751_high_11 (Length: 412)
Name: NF11751_high_11
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11751_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 27326879 - 27327232
Alignment:
| Q |
19 |
catagttcaatccttgttattattaactaactctctcttgttctaacaaattaaccactaatggtttgatttatgattaattactgaagctaatcaatca |
118 |
Q |
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| T |
27326879 |
catagttcaatccttgttattattaactaactctctcttgttctaacaaattaaccactaatggtttgttttatgattaattactgaagctaatcaatca |
27326978 |
T |
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| Q |
119 |
tggtgtgtcggagacgctgagggatgaggttttaagaacaagccaatgctttttcgatctgccaagtgaagnnnnnnnggagtacataagtgaaaagcta |
218 |
Q |
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| T |
27326979 |
tggggtatctgagacgctgagggatgaggttttaagaacaagccaatgctttttcgatctgccaagtgaagaaaaaaaggagtacataagtgaaaagcta |
27327078 |
T |
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| Q |
219 |
tttgatccaattagatgtggtacaagctttaatttgaaggtagacaaaaccctctattggagagattatctcaaatgttatgttcatcctcaatttgatg |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27327079 |
tttgatccaattagatgtggtacaagctttaatttgaaggtagacaaaaccctctattggagagattatctcaaatgttatgttcatcctcaatttgatg |
27327178 |
T |
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| Q |
319 |
ctccttccaagccccctgggtttaggtatatcattcttcttgcacttttattac |
372 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27327179 |
ctccttccaagccccctgggtttaggtatatcattcttcttgcacttttattac |
27327232 |
T |
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