View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11751_high_17 (Length: 311)
Name: NF11751_high_17
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11751_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 8761594 - 8761816
Alignment:
| Q |
17 |
ctcataaattaagaggactataaacgaataatattcgtatgcagcatgctgatggtggcaagagtcaggctgtaagtcgcaggccaattttcgtggaaaa |
116 |
Q |
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| T |
8761594 |
ctcataaattaagaggactataaacgaataatattcgtatgcagcatgctgatggtggcaagagtcaggctgtaagtcgcaggccaattttcgtggaaaa |
8761693 |
T |
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| Q |
117 |
attataaataaaaaattctttggctgcacctatgactagaataattaacaaaatattgacaattaaatatgtttatttgtaaaaataaaatcccaagcta |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8761694 |
attataaataaaaaattctttggctgcacctatgactagaataattagcaaaatattgacaattaaatatgtttatttgtaaaaataaaatcccaagcta |
8761793 |
T |
|
| Q |
217 |
gaaactagctaggactaatttca |
239 |
Q |
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||||||||||||||||||||||| |
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| T |
8761794 |
gaaactagctaggactaatttca |
8761816 |
T |
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