View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11751_low_1 (Length: 936)

Name: NF11751_low_1
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11751_low_1
NF11751_low_1
[»] chr5 (75 HSPs)
chr5 (192-920)||(14288100-14288831)
chr5 (1-162)||(24758982-24759138)
chr5 (1-163)||(4374769-4374929)
chr5 (1-163)||(26379214-26379374)
chr5 (1-163)||(24027775-24027932)
chr5 (1-195)||(3297708-3297897)
chr5 (1-163)||(2475189-2475346)
chr5 (1-163)||(16050689-16050846)
chr5 (1-163)||(31884580-31884737)
chr5 (1-163)||(31939749-31939907)
chr5 (9-161)||(25821231-25821377)
chr5 (1-161)||(27176393-27176548)
chr5 (1-160)||(42110688-42110843)
chr5 (1-161)||(42322876-42323031)
chr5 (1-163)||(665476-665634)
chr5 (1-163)||(5589382-5589539)
chr5 (401-618)||(14281149-14281366)
chr5 (1-73)||(6928360-6928432)
chr5 (1-162)||(2530085-2530242)
chr5 (1-163)||(29383642-29383799)
chr5 (1-162)||(32261632-32261787)
chr5 (5-163)||(43396524-43396680)
chr5 (13-189)||(15976494-15976666)
chr5 (1-163)||(10042792-10042954)
chr5 (1-162)||(28746235-28746390)
chr5 (1-163)||(29874584-29874740)
chr5 (1-73)||(40308340-40308412)
chr5 (1-162)||(3246829-3246985)
chr5 (1-163)||(36088578-36088736)
chr5 (11-160)||(36083804-36083948)
chr5 (1-163)||(8314829-8314987)
chr5 (1-73)||(789026-789098)
chr5 (1-163)||(19361650-19361805)
chr5 (1-73)||(39803853-39803925)
chr5 (5-162)||(42111726-42111877)
chr5 (1-160)||(7536645-7536800)
chr5 (1-66)||(40506809-40506874)
chr5 (1-163)||(789977-790133)
chr5 (1-73)||(19270905-19270977)
chr5 (1-161)||(42416800-42416955)
chr5 (3-71)||(28990940-28991009)
chr5 (1-73)||(37147067-37147139)
chr5 (117-163)||(14205524-14205570)
chr5 (1-161)||(30503448-30503604)
chr5 (1-161)||(30543791-30543947)
chr5 (2-73)||(1060706-1060776)
chr5 (6-73)||(14720185-14720252)
chr5 (117-163)||(30503673-30503719)
chr5 (117-163)||(30544016-30544062)
chr5 (1-67)||(31958390-31958455)
chr5 (18-71)||(15875753-15875806)
chr5 (1-73)||(29382576-29382649)
chr5 (1-163)||(39782959-39783116)
chr5 (18-73)||(2001506-2001561)
chr5 (3-73)||(3213231-3213300)
chr5 (11-73)||(16166292-16166354)
chr5 (117-162)||(16488044-16488089)
chr5 (117-162)||(31958299-31958344)
chr5 (12-73)||(35380505-35380566)
chr5 (117-161)||(788943-788987)
chr5 (1-73)||(18041185-18041256)
chr5 (18-73)||(36515058-36515113)
chr5 (1-44)||(37461872-37461914)
chr5 (119-162)||(40506719-40506762)
chr5 (117-163)||(3213148-3213194)
chr5 (11-73)||(43354523-43354584)
chr5 (117-154)||(15875673-15875710)
chr5 (126-163)||(28887299-28887336)
chr5 (126-163)||(36514975-36515012)
chr5 (21-73)||(14205433-14205485)
chr5 (6-61)||(28869358-28869413)
chr5 (3-44)||(28887186-28887228)
chr5 (126-163)||(14720303-14720340)
chr5 (32-73)||(30503759-30503800)
chr5 (32-73)||(30544102-30544143)
[»] scaffold0481 (2 HSPs)
scaffold0481 (1-163)||(7450-7610)
scaffold0481 (1-160)||(4431-4584)
[»] chr6 (39 HSPs)
chr6 (1-189)||(18593499-18593682)
chr6 (1-163)||(3850227-3850384)
chr6 (3-163)||(559731-559886)
chr6 (1-163)||(20791548-20791705)
chr6 (1-163)||(32244379-32244535)
chr6 (1-191)||(7541107-7541291)
chr6 (1-162)||(28472223-28472380)
chr6 (1-160)||(33945738-33945895)
chr6 (1-163)||(34247671-34247827)
chr6 (1-162)||(6018490-6018646)
chr6 (6-73)||(24046560-24046627)
chr6 (1-163)||(17505488-17505645)
chr6 (1-68)||(6833553-6833620)
chr6 (1-162)||(29859411-29859569)
chr6 (1-73)||(5414562-5414634)
chr6 (1-73)||(34207003-34207075)
chr6 (1-68)||(10945711-10945778)
chr6 (17-163)||(19988908-19989048)
chr6 (1-73)||(24162794-24162866)
chr6 (1-73)||(29043209-29043281)
chr6 (1-73)||(173062-173134)
chr6 (1-73)||(3053915-3053986)
chr6 (6-73)||(8866970-8867037)
chr6 (1-72)||(18314008-18314078)
chr6 (117-163)||(34206927-34206973)
chr6 (117-161)||(10943067-10943111)
chr6 (117-163)||(172967-173013)
chr6 (117-163)||(24046478-24046524)
chr6 (1-44)||(247420-247462)
chr6 (1-44)||(12582487-12582529)
chr6 (117-156)||(29043319-29043358)
chr6 (11-73)||(28231075-28231136)
chr6 (2-44)||(29976317-29976359)
chr6 (117-163)||(29977738-29977784)
chr6 (117-158)||(5414482-5414523)
chr6 (117-161)||(10945820-10945864)
chr6 (126-160)||(24162914-24162948)
chr6 (1-54)||(33976004-33976056)
chr6 (126-163)||(33976119-33976156)
[»] chr8 (76 HSPs)
chr8 (1-163)||(17313456-17313613)
chr8 (1-163)||(17045924-17046082)
chr8 (3-163)||(16239083-16239238)
chr8 (1-163)||(27467713-27467872)
chr8 (1-163)||(34805790-34805949)
chr8 (1-163)||(7219380-7219537)
chr8 (1-163)||(14718868-14719025)
chr8 (1-163)||(39685424-39685581)
chr8 (1-163)||(41360991-41361148)
chr8 (1-163)||(16845029-16845186)
chr8 (1-163)||(43817879-43818036)
chr8 (2-163)||(44602854-44603009)
chr8 (1-163)||(38139313-38139471)
chr8 (1-163)||(169620-169777)
chr8 (1-163)||(44908497-44908649)
chr8 (3-163)||(11924771-11924926)
chr8 (1-160)||(6816033-6816189)
chr8 (1-160)||(26518714-26518867)
chr8 (1-73)||(36059276-36059348)
chr8 (1-73)||(36216576-36216648)
chr8 (1-163)||(37034826-37034984)
chr8 (5-163)||(39485942-39486096)
chr8 (16-195)||(39997991-39998166)
chr8 (1-163)||(38137634-38137791)
chr8 (1-73)||(2184410-2184482)
chr8 (5-163)||(39525458-39525610)
chr8 (1-158)||(45138971-45139122)
chr8 (1-73)||(1877578-1877650)
chr8 (1-73)||(2190647-2190719)
chr8 (1-163)||(11579194-11579350)
chr8 (14-163)||(41526324-41526467)
chr8 (1-73)||(38909288-38909360)
chr8 (1-73)||(42844281-42844352)
chr8 (11-161)||(12261387-12261532)
chr8 (1-65)||(34997532-34997596)
chr8 (18-73)||(27914929-27914984)
chr8 (18-73)||(27961348-27961403)
chr8 (117-163)||(42844411-42844457)
chr8 (1-71)||(1922390-1922457)
chr8 (2-73)||(15310398-15310470)
chr8 (2-73)||(15490767-15490839)
chr8 (1-163)||(44655068-44655224)
chr8 (18-73)||(27748853-27748908)
chr8 (18-73)||(27877985-27878040)
chr8 (18-73)||(28018166-28018221)
chr8 (117-163)||(14449524-14449570)
chr8 (117-163)||(24511638-24511684)
chr8 (3-73)||(39201524-39201593)
chr8 (11-73)||(42984002-42984064)
chr8 (117-161)||(39140716-39140760)
chr8 (117-161)||(42984098-42984142)
chr8 (13-60)||(9275854-9275901)
chr8 (1-44)||(20665621-20665663)
chr8 (117-156)||(33848630-33848669)
chr8 (22-73)||(41904778-41904829)
chr8 (22-73)||(45296785-45296836)
chr8 (117-163)||(40048591-40048637)
chr8 (117-162)||(35916481-35916526)
chr8 (118-163)||(36059192-36059237)
chr8 (118-163)||(36216492-36216537)
chr8 (1-41)||(1921795-1921835)
chr8 (117-157)||(2184329-2184369)
chr8 (123-163)||(2190558-2190598)
chr8 (17-73)||(14449611-14449667)
chr8 (117-160)||(22947644-22947687)
chr8 (1-44)||(30550984-30551026)
chr8 (11-42)||(33848722-33848753)
chr8 (117-160)||(35004369-35004412)
chr8 (1-44)||(44215733-44215775)
chr8 (118-156)||(1877502-1877540)
chr8 (6-64)||(34325869-34325927)
chr8 (19-73)||(39140798-39140852)
chr8 (11-68)||(40048681-40048739)
chr8 (117-163)||(45296702-45296748)
chr8 (118-163)||(29868604-29868649)
chr8 (18-63)||(41903138-41903183)
[»] chr4 (80 HSPs)
chr4 (1-163)||(7400123-7400281)
chr4 (1-163)||(13890909-13891068)
chr4 (1-163)||(53274629-53274787)
chr4 (1-163)||(55208400-55208560)
chr4 (1-163)||(7365797-7365954)
chr4 (1-163)||(26111379-26111539)
chr4 (1-163)||(1166640-1166796)
chr4 (1-163)||(1169122-1169278)
chr4 (1-163)||(11200834-11200992)
chr4 (1-163)||(17624661-17624821)
chr4 (1-163)||(27288389-27288546)
chr4 (1-163)||(55991820-55991979)
chr4 (1-191)||(28116721-28116915)
chr4 (1-163)||(32206509-32206668)
chr4 (1-163)||(40950946-40951103)
chr4 (1-163)||(8847939-8848097)
chr4 (1-160)||(34264550-34264704)
chr4 (1-163)||(55188171-55188328)
chr4 (1-73)||(6940178-6940250)
chr4 (1-73)||(10137883-10137955)
chr4 (1-160)||(11966923-11967076)
chr4 (1-163)||(17976448-17976604)
chr4 (1-163)||(36189974-36190131)
chr4 (4-161)||(23628839-23628990)
chr4 (1-73)||(26097651-26097723)
chr4 (1-162)||(24303720-24303875)
chr4 (1-73)||(11180909-11180981)
chr4 (1-162)||(37873560-37873718)
chr4 (1-163)||(39651736-39651889)
chr4 (1-73)||(41144305-41144377)
chr4 (1-73)||(43117519-43117591)
chr4 (1-163)||(46045716-46045867)
chr4 (1-162)||(28361410-28361565)
chr4 (11-163)||(32139419-32139573)
chr4 (1-73)||(18138336-18138408)
chr4 (1-73)||(20681196-20681268)
chr4 (1-73)||(22556965-22557037)
chr4 (1-73)||(29099625-29099697)
chr4 (1-73)||(32200716-32200788)
chr4 (1-73)||(40665522-40665593)
chr4 (1-73)||(40849729-40849801)
chr4 (1-73)||(49125546-49125618)
chr4 (1-163)||(346520-346679)
chr4 (1-163)||(8151203-8151359)
chr4 (1-68)||(8654320-8654386)
chr4 (118-163)||(45019181-45019226)
chr4 (15-68)||(51153499-51153552)
chr4 (719-775)||(30206534-30206590)
chr4 (86-163)||(34663936-34664012)
chr4 (117-163)||(32200633-32200679)
chr4 (117-163)||(52620733-52620779)
chr4 (1-42)||(34663871-34663912)
chr4 (1-42)||(45472468-45472509)
chr4 (1-66)||(51187618-51187683)
chr4 (1-73)||(24631102-24631173)
chr4 (13-73)||(25881932-25881992)
chr4 (5-73)||(30071346-30071414)
chr4 (118-162)||(34664934-34664978)
chr4 (118-161)||(18138452-18138495)
chr4 (118-161)||(49125663-49125706)
chr4 (118-163)||(10581901-10581946)
chr4 (1-42)||(52620639-52620680)
chr4 (21-73)||(40952041-40952093)
chr4 (1-44)||(10262027-10262069)
chr4 (1-44)||(21562386-21562428)
chr4 (1-44)||(24080098-24080140)
chr4 (1-44)||(43329907-43329949)
chr4 (118-163)||(20681304-20681348)
chr4 (12-73)||(29346227-29346287)
chr4 (12-73)||(35831991-35832051)
chr4 (118-163)||(44856696-44856741)
chr4 (1-73)||(9097470-9097541)
chr4 (1-44)||(26926968-26927010)
chr4 (117-156)||(43117629-43117668)
chr4 (1-44)||(51449973-51450015)
chr4 (118-163)||(8654230-8654276)
chr4 (117-163)||(9097387-9097433)
chr4 (117-163)||(24631018-24631064)
chr4 (117-163)||(41106052-41106098)
chr4 (18-59)||(41105971-41106012)
[»] chr2 (45 HSPs)
chr2 (1-163)||(7274673-7274831)
chr2 (1-191)||(970956-971142)
chr2 (1-163)||(8878122-8878280)
chr2 (1-163)||(36085861-36086019)
chr2 (1-160)||(4631211-4631369)
chr2 (1-158)||(24926005-24926157)
chr2 (1-163)||(1835688-1835844)
chr2 (1-163)||(31972285-31972442)
chr2 (1-163)||(5166269-5166427)
chr2 (1-163)||(8683662-8683819)
chr2 (1-163)||(3243209-3243367)
chr2 (1-163)||(3324178-3324336)
chr2 (1-163)||(18166749-18166905)
chr2 (1-163)||(3079720-3079876)
chr2 (1-73)||(7233026-7233098)
chr2 (1-163)||(34912654-34912810)
chr2 (1-163)||(668206-668366)
chr2 (1-163)||(17032728-17032885)
chr2 (1-163)||(40202218-40202374)
chr2 (27-163)||(20313162-20313294)
chr2 (1-158)||(36078481-36078628)
chr2 (1-163)||(10120612-10120770)
chr2 (1-73)||(38879139-38879211)
chr2 (1-161)||(9799239-9799397)
chr2 (1-160)||(1117981-1118136)
chr2 (1-163)||(35423789-35423939)
chr2 (1-163)||(41452818-41452974)
chr2 (1-73)||(45474725-45474797)
chr2 (117-163)||(17051064-17051110)
chr2 (11-68)||(38709708-38709765)
chr2 (30-158)||(38959564-38959687)
chr2 (1-73)||(2180021-2180093)
chr2 (1-44)||(3708454-3708496)
chr2 (1-44)||(11868920-11868962)
chr2 (1-44)||(17051167-17051210)
chr2 (1-44)||(35360313-35360355)
chr2 (8-65)||(37522706-37522763)
chr2 (1-73)||(35287306-35287377)
chr2 (22-73)||(1692624-1692675)
chr2 (117-160)||(35287226-35287269)
chr2 (117-163)||(2180132-2180178)
chr2 (117-163)||(13549490-13549536)
chr2 (125-163)||(32292307-32292345)
chr2 (117-159)||(38879249-38879291)
chr2 (117-151)||(45474836-45474870)
[»] chr3 (80 HSPs)
chr3 (1-163)||(54510302-54510459)
chr3 (1-163)||(54741806-54741966)
chr3 (1-163)||(29500335-29500493)
chr3 (1-163)||(30268998-30269156)
chr3 (1-163)||(45599181-45599339)
chr3 (1-163)||(53022669-53022826)
chr3 (1-163)||(22346994-22347152)
chr3 (1-163)||(4018919-4019077)
chr3 (1-163)||(7040884-7041041)
chr3 (1-163)||(36592131-36592288)
chr3 (1-163)||(14587301-14587459)
chr3 (1-163)||(48545112-48545270)
chr3 (1-163)||(52461030-52461188)
chr3 (1-163)||(39721262-39721418)
chr3 (1-163)||(7265058-7265215)
chr3 (1-163)||(50739157-50739313)
chr3 (1-163)||(50773542-50773698)
chr3 (1-163)||(52674786-52674942)
chr3 (1-163)||(33932402-33932558)
chr3 (1-161)||(2909435-2909592)
chr3 (1-163)||(26881624-26881780)
chr3 (1-160)||(29450662-29450817)
chr3 (1-163)||(19536710-19536866)
chr3 (1-163)||(48961122-48961276)
chr3 (1-73)||(20849404-20849476)
chr3 (1-73)||(46090118-46090190)
chr3 (1-73)||(13450275-13450347)
chr3 (2-163)||(15496385-15496541)
chr3 (1-163)||(36987654-36987810)
chr3 (1-163)||(37013093-37013249)
chr3 (1-163)||(42187665-42187821)
chr3 (1-73)||(43316516-43316588)
chr3 (1-163)||(46757562-46757720)
chr3 (1-161)||(47719487-47719641)
chr3 (1-73)||(12101464-12101536)
chr3 (1-73)||(35690212-35690284)
chr3 (1-163)||(38361753-38361910)
chr3 (1-163)||(41990680-41990836)
chr3 (1-73)||(46850711-46850783)
chr3 (1-68)||(44762728-44762795)
chr3 (3-158)||(37413574-37413724)
chr3 (1-73)||(54113415-54113487)
chr3 (1-162)||(54203667-54203818)
chr3 (1-73)||(13337102-13337173)
chr3 (1-73)||(50933207-50933279)
chr3 (117-163)||(875880-875926)
chr3 (13-163)||(33899842-33899986)
chr3 (117-163)||(12101377-12101423)
chr3 (1-67)||(12996818-12996883)
chr3 (118-163)||(35529773-35529818)
chr3 (8-52)||(875840-875884)
chr3 (17-73)||(10617639-10617695)
chr3 (1-73)||(20996334-20996406)
chr3 (1-73)||(35906684-35906756)
chr3 (1-73)||(54835729-54835801)
chr3 (22-73)||(8238921-8238972)
chr3 (11-73)||(46088720-46088782)
chr3 (1-63)||(54195692-54195754)
chr3 (117-161)||(46850630-46850674)
chr3 (117-160)||(13450390-13450432)
chr3 (1-44)||(44075414-44075456)
chr3 (117-189)||(54113531-54113603)
chr3 (117-163)||(34433455-34433501)
chr3 (121-163)||(35690122-35690164)
chr3 (117-163)||(44541231-44541277)
chr3 (117-158)||(46090037-46090078)
chr3 (117-162)||(54795955-54796000)
chr3 (119-151)||(10617736-10617768)
chr3 (1-37)||(34433767-34433803)
chr3 (22-73)||(22762296-22762347)
chr3 (127-162)||(50933332-50933367)
chr3 (22-73)||(54796037-54796088)
chr3 (1-39)||(916278-916315)
chr3 (117-163)||(32754259-32754305)
chr3 (18-72)||(44541140-44541194)
chr3 (126-189)||(46088609-46088672)
chr3 (117-163)||(52464882-52464928)
chr3 (725-774)||(19996068-19996117)
chr3 (126-163)||(20849317-20849354)
chr3 (127-160)||(47670453-47670486)
[»] scaffold0197 (1 HSPs)
scaffold0197 (1-163)||(25710-25869)
[»] chr7 (67 HSPs)
chr7 (1-163)||(12907912-12908069)
chr7 (1-162)||(32960712-32960868)
chr7 (1-156)||(27031149-27031301)
chr7 (1-163)||(29448631-29448789)
chr7 (1-163)||(38045658-38045815)
chr7 (1-163)||(40239811-40239969)
chr7 (1-192)||(40789180-40789366)
chr7 (1-161)||(18956216-18956370)
chr7 (1-163)||(10999113-10999271)
chr7 (1-163)||(37669184-37669341)
chr7 (1-163)||(43156193-43156349)
chr7 (1-189)||(17278155-17278340)
chr7 (1-163)||(41426964-41427120)
chr7 (1-160)||(23639333-23639487)
chr7 (1-163)||(1448101-1448258)
chr7 (1-162)||(4407957-4408107)
chr7 (1-163)||(41343235-41343392)
chr7 (1-68)||(45620650-45620717)
chr7 (1-163)||(4399981-4400137)
chr7 (1-163)||(4406541-4406699)
chr7 (1-73)||(20482280-20482352)
chr7 (1-62)||(4615393-4615454)
chr7 (1-73)||(44651882-44651954)
chr7 (1-73)||(47840731-47840803)
chr7 (17-163)||(40035944-40036083)
chr7 (1-73)||(6607097-6607169)
chr7 (1-73)||(36769226-36769298)
chr7 (1-161)||(4404295-4404447)
chr7 (1-158)||(4492356-4492506)
chr7 (1-161)||(5483406-5483562)
chr7 (2-73)||(21134356-21134427)
chr7 (1-73)||(5526108-5526177)
chr7 (117-163)||(16933401-16933447)
chr7 (117-163)||(16938784-16938830)
chr7 (4-73)||(3840021-3840090)
chr7 (86-160)||(20135005-20135077)
chr7 (1-50)||(20135099-20135148)
chr7 (1-42)||(43111035-43111076)
chr7 (86-163)||(43111100-43111175)
chr7 (117-163)||(36765688-36765734)
chr7 (117-163)||(44651793-44651839)
chr7 (117-161)||(23154745-23154789)
chr7 (1-44)||(19036360-19036402)
chr7 (1-44)||(20718234-20718276)
chr7 (1-44)||(29488481-29488523)
chr7 (1-44)||(33232655-33232697)
chr7 (1-44)||(34284797-34284839)
chr7 (22-73)||(42915378-42915429)
chr7 (19-73)||(23154654-23154707)
chr7 (118-160)||(37143542-37143584)
chr7 (117-163)||(38049152-38049198)
chr7 (11-73)||(38049237-38049299)
chr7 (117-163)||(42828799-42828845)
chr7 (118-163)||(4616173-4616218)
chr7 (127-160)||(5526226-5526259)
chr7 (1-42)||(16933500-16933541)
chr7 (1-42)||(16938883-16938924)
chr7 (12-73)||(17816601-17816661)
chr7 (12-73)||(19050340-19050400)
chr7 (124-161)||(36769344-36769381)
chr7 (126-158)||(3840137-3840169)
chr7 (17-73)||(36765592-36765648)
chr7 (126-157)||(20482404-20482435)
chr7 (1-44)||(20762915-20762957)
chr7 (117-163)||(15641229-15641275)
chr7 (117-163)||(47171750-47171796)
chr7 (726-775)||(40332296-40332345)
[»] chr1 (68 HSPs)
chr1 (1-163)||(7833548-7833705)
chr1 (1-163)||(17585518-17585675)
chr1 (1-163)||(41901614-41901772)
chr1 (1-162)||(38802308-38802464)
chr1 (1-163)||(43120693-43120851)
chr1 (1-163)||(9574864-9575021)
chr1 (1-163)||(25659724-25659882)
chr1 (1-163)||(33373735-33373892)
chr1 (1-163)||(33895131-33895289)
chr1 (1-163)||(39326959-39327115)
chr1 (1-192)||(46587978-46588163)
chr1 (1-160)||(11754146-11754300)
chr1 (1-163)||(3265119-3265276)
chr1 (1-163)||(11583159-11583314)
chr1 (1-163)||(33642613-33642770)
chr1 (1-163)||(40432113-40432275)
chr1 (1-160)||(45104183-45104337)
chr1 (1-163)||(14487239-14487396)
chr1 (1-163)||(47037045-47037203)
chr1 (1-163)||(17249038-17249195)
chr1 (1-163)||(33894008-33894159)
chr1 (1-162)||(36165435-36165593)
chr1 (1-163)||(33831845-33831997)
chr1 (1-163)||(33818010-33818166)
chr1 (1-163)||(33877478-33877634)
chr1 (1-158)||(43123042-43123193)
chr1 (1-160)||(43119032-43119186)
chr1 (1-73)||(24473551-24473623)
chr1 (1-73)||(46040486-46040558)
chr1 (14-161)||(16097358-16097502)
chr1 (30-160)||(31215782-31215907)
chr1 (30-160)||(31221537-31221662)
chr1 (1-68)||(36952718-36952785)
chr1 (1-73)||(18091277-18091348)
chr1 (1-163)||(31638331-31638487)
chr1 (1-73)||(39879140-39879212)
chr1 (15-161)||(17366271-17366411)
chr1 (1-73)||(1322525-1322597)
chr1 (1-65)||(34652277-34652341)
chr1 (1-68)||(34078285-34078352)
chr1 (8-163)||(23730210-23730359)
chr1 (6-73)||(11606467-11606534)
chr1 (15-163)||(39729120-39729262)
chr1 (117-160)||(33933029-33933072)
chr1 (118-161)||(36952630-36952673)
chr1 (1-73)||(7308331-7308404)
chr1 (117-161)||(44819821-44819865)
chr1 (117-161)||(45589729-45589773)
chr1 (22-73)||(28568754-28568805)
chr1 (118-161)||(34652388-34652431)
chr1 (1-64)||(43124356-43124419)
chr1 (117-160)||(46040405-46040448)
chr1 (117-163)||(16033008-16033054)
chr1 (117-163)||(39879056-39879102)
chr1 (22-71)||(17670009-17670058)
chr1 (117-158)||(40648494-40648535)
chr1 (13-73)||(44065442-44065502)
chr1 (11-71)||(49223163-49223222)
chr1 (117-163)||(49571314-49571357)
chr1 (117-160)||(12247685-12247728)
chr1 (22-73)||(23910914-23910965)
chr1 (17-68)||(33932934-33932985)
chr1 (124-163)||(34078401-34078440)
chr1 (117-163)||(28568671-28568717)
chr1 (117-163)||(36680039-36680085)
chr1 (117-151)||(43808845-43808879)
chr1 (126-163)||(17670106-17670143)
chr1 (117-162)||(18091391-18091436)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-162)||(1476-1632)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-163)||(7204-7364)
[»] scaffold0024 (3 HSPs)
scaffold0024 (1-163)||(90374-90533)
scaffold0024 (118-163)||(110442-110487)
scaffold0024 (1-68)||(110532-110599)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-163)||(15174-15333)
[»] scaffold0244 (2 HSPs)
scaffold0244 (1-73)||(7574-7646)
scaffold0244 (126-160)||(7493-7527)
[»] scaffold0768 (1 HSPs)
scaffold0768 (1-68)||(6308-6375)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-162)||(132659-132817)
[»] scaffold0003 (2 HSPs)
scaffold0003 (18-73)||(229101-229156)
scaffold0003 (117-163)||(229195-229241)
[»] scaffold1793 (1 HSPs)
scaffold1793 (117-163)||(182-228)
[»] scaffold0318 (2 HSPs)
scaffold0318 (18-73)||(1072-1127)
scaffold0318 (126-199)||(1174-1247)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-68)||(138034-138101)
scaffold0027 (117-163)||(137944-137990)
[»] scaffold1822 (1 HSPs)
scaffold1822 (117-163)||(356-402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (13-73)||(5732-5793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-73)||(31572-31633)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-73)||(156569-156640)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-163)||(99491-99537)


Alignment Details
Target: chr5 (Bit Score: 625; Significance: 0; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 625; E-Value: 0
Query Start/End: Original strand, 192 - 920
Target Start/End: Original strand, 14288100 - 14288831
Alignment:
Q  192 atatgtttgataattcaaaaatgttgatttaatacattgtttttaataatttggcaactgaaattaatcaaatgtgaaccaatctagagtgaaatagt-- 289  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  |      
T  14288100 atatgtttgataattcaaacatgttgatttaatacattgtttttaataatttggcaactgaagttaatcaaatgtgaaccaatccagagtaaaatgtttt 14288199  T
Q  290 atatcagaatttgaaaaatctaccaccc--acacccacccactcagctaaacagacagcatagcatacagtgagtgcaggatgcgtagctccgactccga 387  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  14288200 atatcagaatttgaaaaatctaccacccccacacccactcactcagctaaacaaacagcatagcatacagtgagtacaggatgcgtagctccgactccga 14288299  T
Q  388 caccgacctcgggtggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagccgctcttccgctttctcgcc 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14288300 caccgacctcgggtggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagtcgctcttccgctttctcgcc 14288399  T
Q  488 aactacattgcaactaaaaccacttccctctctcaagtcgagatagctcgcctctccacctccgagataactcgcctcatctctaacctctccgaaaccg 587  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14288400 aactacattgcaactaaaaccacttccctctctcaagtcgagatagctcgcctctctacctccgagataactcgcctcatctctaacctctccgaaaccg 14288499  T
Q  588 atatcaaccgcctcttcaatgccggcatttctgaatttgtcgacggtatcttcgaaccatttcttcctttcttcaaaatgtttttcgccgg-tagctatc 686  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||     
T  14288500 atatcaaccgcctcttcaatgccggcatttctgaatttgtcgacggtatcttcgaaccatttcttcctttcttcaaaatgtttttcgccggatatatatt 14288599  T
Q  687 tctttcttcatccattttacttgcaaatatatatattccttttttcagattcatcgaataattcatgtatctcgtttataatatagaccggatacaccag 786  Q
     |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14288600 cctttcttcatccattttacttgcaa--atatatattccttttttcagattcatcgaataattcatgtatctcgtttataatatagaccggatacaccag 14288697  T
Q  787 aggatgttattactcatctctttctttttccaggttgctttggcctcatactcttaaagaacgccatcctaatttaccaggtattagggtggaacaattt 886  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14288698 aggatgttattgctcatctctttctttttccaggttgctttggcctcatactcttaaagaacgccatcctaatttaccaggtattagcgtggaacaattt 14288797  T
Q  887 tccttttaattcaattcctttgtctctcataact 920  Q
    ||||||||||||||||||||||||||||||||||    
T  14288798 tccttttaattcaattcctttgtctctcataact 14288831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24758982 - 24759138
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  24758982 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 24759078  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  24759079 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 24759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4374929 - 4374769
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||            |||||||||||||||    
T  4374929 aaaaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaaaaataaagaaaccaaaca 4374830  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4374829 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4374769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26379214 - 26379374
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  26379214 aaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaacttaaaaaaaaaaataaagaaaccaaaca 26379313  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||| |||||||||||||||||||||||||||||||||| |||||||    
T  26379314 gctttagcc--tttttcttagagagctttattttaactttgttttaaagtagcttgtagaccg 26379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24027932 - 24027775
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||            |||||||||||||||    
T  24027932 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagagct---aaaaaaaaataaagaaaccaaaca 24027836  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  24027835 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 24027775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 3297897 - 3297708
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |            |||||||||||||||    
T  3297897 aaaaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaatt---acaaaaaaataaagaaaccaaaca 3297801  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatat 195  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||| ||||    
T  3297800 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacctacatat 3297708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2475346 - 2475189
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||| |    
T  2475346 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaata 2475250  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  2475249 gctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagtttttagaccg 2475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16050846 - 16050689
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  16050846 aaaaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 16050750  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16050749 gctttagcc--tttttcttaaagaactttattttaactttgttttaaaatagcttttagaccg 16050689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31884737 - 31884580
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  31884737 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 31884641  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  31884640 gctttagcc--tttttcttatagagttttattttaactttattttaaagtagcttttagaccg 31884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31939907 - 31939749
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||            |||||||||||||||    
T  31939907 aaaaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 31939810  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31939809 actttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 31939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 25821231 - 25821377
Alignment:
Q  9 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||| |||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttagc 25821326  T
Q  109 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |       |||||||||||||||||||||||||||||||||||||||||||||    
T  25821327 c--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 25821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 27176548 - 27176393
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            |||||||||||||||    
T  27176548 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 27176452  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||||       |||||||||||||||||||||||||||||||| || |||||||||    
T  27176451 gctttagcc--tttttcttaaagagctttattttaactttgttttaaaataccttttagac 27176393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42110688 - 42110843
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  42110688 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 42110785  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||||       |||||||| ||||||||||||||| |||||||||||||||||||    
T  42110786 gctttagcc--tttttcttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42322876 - 42323031
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  42322876 aaaaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact---aaaaacaaataaagaaaccaaaca 42322972  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
     ||||||||       || ||||||||||||||||||||||||||||||||||||||||||    
T  42322973 actttagcc--tttttctcaaagagctttattttaactttgttttaaagtagcttttagac 42323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 665634 - 665476
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  665634 aaaaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 665537  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||| |       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  665536 actttagtc--tttttcttaaagagctttattttaaatttgttttaaagtagcttttagaccg 665476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5589539 - 5589382
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  5589539 aaaaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 5589442  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5589441 gctttagcc--tttttcttaaagagcttta-tttaactttgttttaaagtagcttttagaccg 5589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 401 - 618
Target Start/End: Original strand, 14281149 - 14281366
Alignment:
Q  401 tggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagccgctcttccgctttctcgccaactacattgcaa 500  Q
    ||||||||| |  |||||||||||||||||||||||| | || ||||| ||||| | ||| |||| || |||| ||| || ||||||||||||||||| |    
T  14281149 tggcccggcatcgaactctcccgccctctcaccgactatctctccgaccccgacaaaataactcacccactctaccgtttcctcgccaactacattgcta 14281248  T
Q  501 ctaaaaccacttccctctctcaagtcgagatagctcgcctctccacctccgagataactcgcctcatctctaacctctccgaaaccgatatcaaccgcct 600  Q
    | |||||| |||||||| |  |||||||||||||||||||| ||||| ||||||||| |  |||||||||| | ||| | ||| | || ||||||||| |    
T  14281249 caaaaacctcttccctcaccgaagtcgagatagctcgcctcaccaccgccgagataaataacctcatctctcaactccctgaacctgagatcaaccgcat 14281348  T
Q  601 cttcaatgccggcatttc 618  Q
    | |||| |||||| ||||    
T  14281349 cctcaacgccggcgtttc 14281366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6928432 - 6928360
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6928432 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2530085 - 2530242
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  2530085 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--gaaaaaaaaataaagaaaccaaaca 2530182  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
      |||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  2530183 attttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagacc 2530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29383799 - 29383642
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| || ||||            |||||||||||||||    
T  29383799 aaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact---aaaaaaaaataaagaaaccaaaca 29383703  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29383702 actttagcc--tttttcttaaagacctttattttaactttgttttaaagtagcttttagaccg 29383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32261787 - 32261632
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  32261787 aaaaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 32261691  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
      |||||||       || |||||||||||||||||||||||||||||||||||||||||||    
T  32261690 -atttagcc--tttttctgaaagagctttattttaactttgttttaaagtagcttttagacc 32261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 43396524 - 43396680
Alignment:
Q  5 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||             ||| ||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaactaaagaaaaaaaaaaaaaaaaccaaacagctt 43396623  T
Q  105 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  43396624 tagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 43396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 15976494 - 15976666
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnn 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||            ||||||||||||||||||||||||       
T  15976494 attcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact--aaaaaaaaaataaagaaaccaaacagctttagccttt 15976591  T
Q  113 nnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 189  Q
         |||||||||||||||||||||||||||||||||  |||||||||||       ||||| |||||||||||||    
T  15976592 ttt--ttaaagagctttattttaactttgttttaaagtgacttttagaccgaaaaaaagtctggtcaaacggtacct 15976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10042792 - 10042954
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac--tnnnnnnnnnnnntaaagaaaccaaa 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| | |||               |||||||||||||    
T  10042792 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaacaaaaataaaataaaataaagaaaccaaa 10042891  T
Q  99 cagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  10042892 cagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 10042954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28746390 - 28746235
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||| ||||||    
T  28746390 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaatcaaaca 28746295  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    | ||||  |       ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28746294 gtttta--cctttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 28746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29874740 - 29874584
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||            |||||||||||||||    
T  29874740 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact----aaaaaaaataaagaaaccaaaca 29874645  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  29874644 gctttagc--ttttttcttaaagaactttatttttactttgttttaaagtagcttttagaccg 29874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40308340 - 40308412
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  40308340 aaaaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3246829 - 3246985
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            |||||||||||||||    
T  3246829 aaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 3246925  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||| |        ||||||||| ||||||||||||||||||||||||||||||||||||    
T  3246926 gctttaac--tttttccttaaagagttttattttaactttgttttaaagtagcttttagacc 3246985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 36088578 - 36088736
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||| || |            ||||||||||||||     
T  36088578 aaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaaat---aaaaaaaaataaagaaaccaaacg 36088674  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||    
T  36088675 actttagcc-ttctttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 36088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 36083804 - 36083948
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccn 110  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            ||||||||||||||||||||||||     
T  36083804 aaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---aaaaaaatataaagaaaccaaacagctttagcc- 36083899  T
Q  111 nnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
          ||||||| |||||||||||||||| ||||||||||| |||||||    
T  36083900 -attttcttaaagggctttattttaactttattttaaagtagtttttaga 36083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8314829 - 8314987
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||| ||||            |||| ||||||||||    
T  8314829 aaaaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact--aaaaaaaaattaaaaaaaccaaaca 8314926  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8314927 actttag--ttttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 8314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 789098 - 789026
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  789098 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19361650 - 19361805
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  19361650 aaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 19361745  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19361746 gctttagc--tttttccttaaagagctttattttaaccttgttttaaagtag-ttttagaccg 19361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39803925 - 39803853
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  39803925 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 42111877 - 42111726
Alignment:
Q  5 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||            |||||||| ||||||| ||    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact----aaaaaaaataaagaaatcaaacagttt 42111782  T
Q  105 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    || |        |||||||| |||||||||||||||||||||||||||||||||||||    
T  42111781 taac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagacc 42111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 7536645 - 7536800
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7536645 aaaaaaaaaaaaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 7536742  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
     |||||||        |||||||| |||||||||||||||||||||||||||||||||||    
T  7536743 actttagc--tttttccttaaagaactttattttaactttgttttaaagtagcttttaga 7536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40506874 - 40506809
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  40506874 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactt 40506809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 790133 - 789977
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            ||||||||||||| |    
T  790133 aaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaata 790038  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||| |        ||||||||||||||||||||||||||||||||||| |||||||||||    
T  790037 gttttaac--ttttttcttaaagagctttattttaactttgttttaaagtaccttttagaccg 789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19270905 - 19270977
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||| ||||||||||    
T  19270905 aaaaaataataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 42416800 - 42416955
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| ||              |||||||||||||||    
T  42416800 aaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa---taaaaaaaaaataaagaaaccaaaca 42416896  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
     ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||    
T  42416897 actttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagac 42416955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 28991009 - 28990940
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaa 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||    
T  28991009 aaaataataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagctttaaaa 28990940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37147067 - 37147139
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  37147067 aaaaaaaaaaaaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 14205524 - 14205570
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14205524 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 14205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30503604 - 30503448
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            |||||||||||||||    
T  30503604 aaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaactaaaaaaaaat--taaagaaaccaaaca 30503507  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
     ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30503506 actttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30503448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30543947 - 30543791
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            |||||||||||||||    
T  30543947 aaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaactaaaaaaaaat--taaagaaaccaaaca 30543850  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
     ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30543849 actttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30543791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 1060706 - 1060776
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||| |||||||    
T  1060706 aaaaataataaattcaaagttt-gtacaatattttgtcaaacaatttttaacttaaaaataactctaaaact 1060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 14720185 - 14720252
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| || || ||||||| ||||||||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 30503719 - 30503673
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30503719 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30503673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 30544062 - 30544016
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30544062 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31958455 - 31958390
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 67  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  31958455 aaaaagtaataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 15875806 - 15875753
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 71  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataactttaaaa 15875753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29382649 - 29382576
Alignment:
Q  1 aaaaaataataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| |||  |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29382649 aaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 39782959 - 39783116
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaagaaaccaaac 99  Q
    ||||| |||||| || |||||| | ||||||||||||||||||| ||||||||| |||||||||||| ||||||            ||||||||||||||    
T  39782959 aaaaagtaataagtttaaagttgt-tacaatattttgccaaacaacttttaactgaaaaataactttcaaaactaaaaaataa---taaagaaaccaaac 39783054  T
Q  100 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |        |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39783055 agctttaac--ttattccttaaagaactttattttaactttgttttaaagtagcttttaaaccg 39783116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 3213300 - 3213231
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||| ||||||||||||| |||||| | |||||||  |||||| ||||||||||    
T  3213300 aaaataataaattcaaagttt-gtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| |||||||| |||| ||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 16488089 - 16488044
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  16488089 cttaaagaactttattttaactttattttaaagtagcttttagacc 16488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 31958344 - 31958299
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  31958344 cttaaagagttttattttaactttgttttaaagtagtttttagacc 31958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  12 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||| |||||||| |||||||||||||||| ||||||||| |||| |||||||| ||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 788987 - 788943
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  788987 cttaaagagctttattttaagtttgttttaaagtaacttttagac 788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18041256 - 18041185
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| |||| |||||| |||||||||| ||||| | ||||||| ||||||| ||||||||||    
T  18041256 aaaaaataataaatttaaag-tttgtaaaatattttgcgaaacaacatttaacttaaaaatagctttaaaact 18041185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 36515113 - 36515058
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  36515113 aagttttgtacattattttgccaaacaacttttaactttaaaataattttaaaact 36515058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37461872 - 37461914
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  37461872 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 37461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 40506762 - 40506719
Alignment:
Q  119 taaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  40506762 taaagagttttattttaactttgttttaaaatagcttttagacc 40506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 3213194 - 3213148
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  3213194 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 3213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 43354523 - 43354584
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  43354523 aaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 43354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 15875710 - 15875673
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagct 154  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15875710 cttaaagacctttattttaactttgttttaaagtagct 15875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 28887299 - 28887336
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28887299 ctttattttaactttgttttaaagtaacttttagaccg 28887336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 36515012 - 36514975
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36515012 ctttattttaactttgttttaaaggagcttttagaccg 36514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  21 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||| ||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 28869358 - 28869413
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaat 61  Q
    |||| ||||| ||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  28869358 ataacaaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 28887186 - 28887228
Alignment:
Q  3 aaaataataaa-ttcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  28887186 aaaataataaaatttaaagttttgtacaatattttgccaaaca 28887228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 14720303 - 14720340
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||| ||||||||||||||||||||||| ||||||||||    
T  14720303 cttaattttaactttgttttaaagtagtttttagaccg 14720340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  32 attttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  32 attttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 93; Significance: 9e-45; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7450 - 7610
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  7450 aaaaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataataaagaaaccaaaca 7549  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7550 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4584 - 4431
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  4584 aaaaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 4489  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  4488 gctttagc--atttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 9e-45; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 18593682 - 18593499
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  18593682 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 18593586  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 189  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  18593585 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 18593499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3850227 - 3850384
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  3850227 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 3850323  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3850324 gctttagcc--tttttcttaaagagctttattttaactttgtttgaaagtagcttttacaccg 3850384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 559731 - 559886
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||| |    
T  559731 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccaaacaac 559827  T
Q  103 tttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  559828 tttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20791548 - 20791705
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  20791548 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 20791644  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    || ||| ||       |||||||||||||||||||||||||||||||||||  ||||||||||    
T  20791645 gccttaacc--tttttcttaaagagctttattttaactttgttttaaagtattttttagaccg 20791705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32244379 - 32244535
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||            |||||||||||||||    
T  32244379 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact----aaaaaaaataaagaaaccaaaca 32244474  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32244475 gttttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 7541107 - 7541291
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7541107 aaaaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaa----taaagaaaccaaaca 7541202  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaa 191  Q
    ||||||||        |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  7541203 gctttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacctaa 7541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28472223 - 28472380
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  28472223 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaataaataaagaaaccaaaca 28472320  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
     ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  28472321 actttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 28472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33945895 - 33945738
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||              |||||||| |||||    
T  33945895 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaaccaaaaaaaaaaaaaaaagaaacaaaaca 33945796  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||| |       |||||| |||||||||||||||||||||||||||| ||||||||    
T  33945795 gctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtatcttttaga 33945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34247827 - 34247671
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  34247827 aaaaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 34247732  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  34247731 gctttaac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagaccg 34247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6018646 - 6018490
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| | ||            |||||||||||||||    
T  6018646 aaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagatct---aaaaaaaaataaagaaaccaaaca 6018550  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||| |        ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6018549 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 6018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 24046627 - 24046560
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24046627 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17505488 - 17505645
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||| ||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  17505488 aaaaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaactaaaaataaa---taaagaaaccaaaca 17505584  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  17505585 gctttaa--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17505645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6833553 - 6833620
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6833553 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29859411 - 29859569
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||  ||| ||||            |||||||||||||||    
T  29859411 aaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact-aaaaaaataaataaagaaaccaaaca 29859509  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
     ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  29859510 actttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 29859569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5414634 - 5414562
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  5414634 aaaaattaataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34207075 - 34207003
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  34207075 aaaaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10945711 - 10945778
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  10945711 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataacttta 10945778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 19988908 - 19989048
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 116  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||            |||||||||||||||||||||  |           
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact----ataaaaaataaagaaaccaaacagcttta--catttttt 19989001  T
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||    
T  19989002 ctaaaagagctttattttaactttgttttaaagtagattttagaccg 19989048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24162794 - 24162866
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||| ||||    
T  24162794 aaaaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29043209 - 29043281
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29043209 aaaaaaaaaaaaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 173134 - 173062
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||||| |||| ||||    
T  173134 aaaaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3053986 - 3053915
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  3053986 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 8866970 - 8867037
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18314008 - 18314078
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 72  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| | ||||| | |||||||||||||||||    
T  18314008 aaaaaataataaattcaaagttt-gtacaatattttgccacacaacatttaaattaaaaataactttaaaac 18314078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 34206973 - 34206927
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  34206973 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 34206927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 10943111 - 10943067
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  10943111 cttaaagagctttattttaactttgttttaaagtagattttagac 10943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 173013 - 172967
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  173013 cttaaagagttttattttaactttgttttaaagtagtttttagaccg 172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 24046524 - 24046478
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  24046524 cttaaatagttttattttaactttgttttaaagtagcttttagaccg 24046478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 247420 - 247462
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  247420 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12582529 - 12582487
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12582529 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 12582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 29043319 - 29043358
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttt 156  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29043319 cttaaagagctctattttaactttgttttaaagtagcttt 29043358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 28231136 - 28231075
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  28231136 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 29976317 - 29976359
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  29976317 aaaaataataaatttaaagttttgtacaatatttttccaaaca 29976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 29977738 - 29977784
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  29977738 cttaaagagctttatttaaactttgttttaaaatagtttttagaccg 29977784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 5414523 - 5414482
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  5414523 cttaaagagttttattttaactttgttttaaaatagctttta 5414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 10945820 - 10945864
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  10945820 cttaaagaactttattttaactttgttttaaagtaaattttagac 10945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 24162914 - 24162948
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||||||||||||||||||| |||||||    
T  24162914 ctttattttaactttgttttaaagtagtttttaga 24162948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33976004 - 33976056
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaact 54  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| | |||||||    
T  33976004 aaaaaataataaattcaaag-tttgtataatattttgtcaaacaacatttaact 33976056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 33976119 - 33976156
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  33976119 ctttattttaactttgttttgaagtaacttttagaccg 33976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 3e-44; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17313613 - 17313456
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  17313613 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 17313517  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17313516 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17313456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17046082 - 17045924
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  17046082 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 17045985  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17045984 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17045924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 16239238 - 16239083
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||||    
T  16239238 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccaaacagc 16239142  T
Q  103 tttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  16239141 tttaacc--tttatcttaaagagctttattttaactttgttttaaagtagcttttagaccg 16239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 27467713 - 27467872
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  27467713 aaaaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 27467811  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27467812 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34805790 - 34805949
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||||||||||||    
T  34805790 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaagaaaccaaaca 34805888  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  34805889 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 34805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7219380 - 7219537
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||||||||||||    
T  7219380 aaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 7219476  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7219477 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 14718868 - 14719025
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||| |    
T  14718868 aaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaata 14718964  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14718965 gctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 14719025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 39685424 - 39685581
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  39685424 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 39685520  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |       |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  39685521 gctttagtc--tttttcttaaagagctttattttaactttattttaaaatagcttttagaccg 39685581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41360991 - 41361148
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||            |||||||||||||||    
T  41360991 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagtact---aaaaaaaaataaagaaaccaaaca 41361087  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41361088 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41361148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16845029 - 16845186
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||            |||||||| ||||||    
T  16845029 aaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact---aaaaaaaaataaagaaatcaaaca 16845125  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16845126 gctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 16845186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43818036 - 43817879
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  43818036 aaaaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccaaaca 43817940  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||| || ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43817939 gctataacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 44603009 - 44602854
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacag 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||     
T  44603009 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaacaa 44602913  T
Q  102 ctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||       | |||||||||||||||||||||||||||||| ||| ||||||||||    
T  44602912 ctttagcc---ttttcgtaaagagctttattttaactttgttttaaaatagtttttagaccg 44602854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38139313 - 38139471
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  38139313 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaataaaataaagaaaccaaaca 38139410  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  38139411 acttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 38139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 169777 - 169620
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||            |||||||||||||||    
T  169777 aaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact----aaaagaaataaagaaaccaaaca 169682  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||        ||||||  ||||||||||||||| ||||||||||||||||||||||    
T  169681 gctttagccttttttt-ttaaaggactttattttaactttattttaaagtagcttttagaccg 169620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44908497 - 44908649
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||||||||         
T  44908497 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaacc----- 44908588  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  44908589 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 44908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 11924771 - 11924926
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagc 102  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            |||| ||||||||||||    
T  11924771 aaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---gaaaaaaaataaaaaaaccaaacagc 11924867  T
Q  103 tttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||        ||||||| | |||||||||||||||||||||||||||||||||||||    
T  11924868 tttagc--ttttttcttaaagggttttattttaactttgttttaaagtagcttttagaccg 11924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6816033 - 6816189
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            |||||||| ||||||    
T  6816033 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaagaaatcaaaca 6816131  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||| |        |||||| ||||||||||||||||||||||||||||||||||||    
T  6816132 gctttagtctttttt--ttaaagggctttattttaactttgttttaaagtagcttttaga 6816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 26518867 - 26518714
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            |||||| ||||||||    
T  26518867 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact---aaaaaaaaataaagacaccaaaca 26518772  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
     ||||||||       ||||||||||||||| |||||||| |||||||||||||||||||    
T  26518771 actttagcc--tttttcttaaagagctttatcttaactttattttaaagtagcttttaga 26518714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36059348 - 36059276
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  36059348 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36216648 - 36216576
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  36216648 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37034826 - 37034984
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            ||||||||||||| |    
T  37034826 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaattaaaa--taaagaaaccaaata 37034923  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||||        ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  37034924 actttagc--tttttccttaaagagctatattttaactttgttttaaagtaaattttagaccg 37034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 39486096 - 39485942
Alignment:
Q  5 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 104  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||            |||||||| ||||||||||    
T  39486096 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact--aaaaaaaaaataaagaaaacaaacagctt 39485999  T
Q  105 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    || |        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39485998 taac--tttttccttaaagagctttattttaactttgttttaaagtagcctttagaccg 39485942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 39997991 - 39998166
Alignment:
Q  16 caaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnn 115  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||          
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaacagctttagcc--tttt 39998086  T
Q  116 ncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatat 195  Q
     |||| |||||||||||||||||||||||||||||| |||||||||||       |||||  ||||||||||||||||||    
T  39998087 tcttatagagctttattttaactttgttttaaagtatcttttagaccgaaaaaaagtctggccaaacggtacctaaatat 39998166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38137791 - 38137634
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  38137791 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaatt---aaaaataaataaagaaaccaaaca 38137695  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||  |       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  38137694 acttta--cctttttccttaaagagttttattttaactttgttttaaagtagcttttagaccg 38137634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2184482 - 2184410
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  2184482 aaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 39525458 - 39525610
Alignment:
Q  5 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 104  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||||||||||| |||    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactt 39525553  T
Q  105 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    || |        |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39525554 taac--ttttttcttatagagctttattttaactttgttttaaagtagcttttagaccg 39525610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 45139122 - 45138971
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || ||| ||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||            |||||||||||||||    
T  45139122 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaaca 45139027  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  45139026 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1877650 - 1877578
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||| ||||    
T  1877650 aaaaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2190719 - 2190647
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||    
T  2190719 aaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11579194 - 11579350
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  11579194 aaaaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 11579289  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |         ||||| || |||||||||||||||||||||||||||||||||||||    
T  11579290 gctttaac--tttttctttaaaaaggtttattttaactttgttttaaagtagcttttagaccg 11579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 41526324 - 41526467
Alignment:
Q  14 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnn 113  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            ||||||||||||||| ||||||          
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttag--tttt 41526417  T
Q  114 nnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41526418 tttcttaaagagctttattttaactttgttttaaagtagcttctagaccg 41526467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38909288 - 38909360
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || ||||||||| ||||||||||||| ||||    
T  38909288 aaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42844281 - 42844352
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42844281 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 12261532 - 12261387
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagcc 109  Q
    ||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||            ||||||||||||||||||||| |     
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaacagctttaac- 12261438  T
Q  110 nnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
           |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  12261437 -tttttccttaaagaactttattttaactttattttaaagtagtttttagac 12261387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34997532 - 34997596
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 65  Q
    ||||||||||||||||  | |||||||||||||||||||||||| ||||||||| ||||||||||    
T  34997532 aaaaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataact 34997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 42844411 - 42844457
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 42844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1922390 - 1922457
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 71  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||| | ||||||| ||||||||    
T  1922390 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaatttaaaaatagctttaaaa 1922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 15310398 - 15310470
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 73  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15310398 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 15490767 - 15490839
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 73  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15490767 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44655068 - 44655224
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||| |||||||||||||||| || ||||||||||||| ||||| ||| ||||||||  ||| | ||            |||||||| ||||||    
T  44655068 aaaaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataaagttagagct----aaaaaaaataaagaaatcaaaca 44655163  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44655164 gctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 44655224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27748853 - 27748908
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  27748853 aagttttgcataatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 14449570 - 14449524
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttagaccg 14449524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 24511638 - 24511684
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  24511638 cttaaagatctttattttaactttgttttaaagtagcttttaaaccg 24511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 39201524 - 39201593
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||  |||||||||    
T  39201524 aaaataataaattcaaa-ttttgtacaatattttgccaaacaacatttaactttaaaatagttttaaaact 39201593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 39140760 - 39140716
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  39140760 cttaaagaactttattttaactttgttttaaagtaacttttagac 39140716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 42984098 - 42984142
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  42984098 cttaaagagctttatttcaactttgttttaaagtagtttttagac 42984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 60  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20665663 - 20665621
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20665663 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 20665621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 33848669 - 33848630
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttt 156  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  33848669 cttaaggagctttattttaactttgttttaaagtagcttt 33848630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 41904778 - 41904829
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  41904778 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 45296836 - 45296785
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  45296836 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 40048637 - 40048591
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  40048637 cttaaagaactttattttaactttattttaaaatagcttttagaccg 40048591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 35916526 - 35916481
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||    
T  35916526 cttaaagagctttattttaactttgttttaaagcagttttcagacc 35916481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 36059237 - 36059192
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||    
T  36059237 ttaaagaactttatttgaactttgttttaaagtagcttttataccg 36059192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 36216537 - 36216492
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  36216537 ttaaagaactttattttaatttttttttaaagtagcttttagaccg 36216492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1921795 - 1921835
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaa 41  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  1921795 aaaaaataataaattcaaagttgtgtataatattttgccaa 1921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 2184369 - 2184329
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagctttt 157  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  2184369 cttaatgagctttattttaactttattttaaagtagctttt 2184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 2190598 - 2190558
Alignment:
Q  123 gagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  2190598 gagctttattttaactttattttaaagtagcttttggaccg 2190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||| ||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 22947687 - 22947644
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  22947687 cttaaaggcctttattttaactttgttttaaagtaacttttaga 22947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30551026 - 30550984
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  30551026 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 30550984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 42
Target Start/End: Complemental strand, 33848753 - 33848722
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaa 42  Q
    ||||||||||||||||||||||||||||||||    
T  33848753 aaattcaaagttttgtacaatattttgccaaa 33848722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 35004369 - 35004412
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttaga 35004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44215775 - 44215733
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  44215775 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 44215733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 1877540 - 1877502
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttt 156  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1877540 ttaaagagctttattttatctttattttaaagtagcttt 1877502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 34325869 - 34325927
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 64  Q
    |||||||||| ||| |||| |||||||||||| |||||| ||||||||| || ||||||    
T  34325869 ataataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataac 34325927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39140852 - 39140798
Alignment:
Q  19 agttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||| ||||| ||||||||| |||| ||  |||||||||    
T  39140852 agttttgtacaatattttgctaaacaacttttaacttaaaattagttttaaaact 39140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 40048739 - 40048681
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaa-cagcttttaactcaaaaataacttta 68  Q
    ||||||||||||||| |||||||| ||| ||| || ||||||||| |||||||||||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataacttta 40048681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 45296748 - 45296702
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  45296748 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 45296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 29868604 - 29868649
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| | |||||||||||||| ||||||||||||| ||||||||    
T  29868604 ttaaagggttttattttaactttattttaaagtagctattagaccg 29868649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 41903183 - 41903138
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataa 63  Q
    ||||||| |||||||||||||||||||  |||||||| ||||||||    
T  41903183 aagttttatacaatattttgccaaacaaattttaacttaaaaataa 41903138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 3e-44; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7400281 - 7400123
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  7400281 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 7400184  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7400183 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13891068 - 13890909
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  13891068 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 13890970  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  13890969 gctttaacc--ttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 13890909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53274629 - 53274787
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  53274629 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 53274726  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53274727 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 55208560 - 55208400
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||            |||||||||||||||    
T  55208560 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaactaaaaaaaaaaaataaagaaaccaaaca 55208461  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  55208460 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 55208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7365797 - 7365954
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7365797 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 7365893  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7365894 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7365954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26111379 - 26111539
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  26111379 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 26111477  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  26111478 gctttagcc-ttttatcttaaagaactttattttaactttgttttaaagtagcttttagaccg 26111539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1166640 - 1166796
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  1166640 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 1166735  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1166736 gttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1169122 - 1169278
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  1169122 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 1169217  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1169218 gttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1169278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11200834 - 11200992
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  11200834 aaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 11200931  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  11200932 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 11200992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17624661 - 17624821
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  17624661 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 17624759  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17624760 gctttagcc-ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 17624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27288546 - 27288389
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||| ||||    
T  27288546 aaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccgaaca 27288450  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27288449 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 55991820 - 55991979
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||            |||||||||||||||    
T  55991820 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaagaaaccaaaca 55991918  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  55991919 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 55991979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 28116915 - 28116721
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact------nnnnnnnnnnnntaaagaaac 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||||||||    
T  28116915 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaaaaaataaagaaac 28116816  T
Q  95 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaa 191  Q
    |||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  28116815 caaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgtaaaaaagtctgatcaaacggtacctaa 28116721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32206668 - 32206509
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||| |||||     
T  32206668 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaataaataaagaaatcaaacg 32206570  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32206569 gctttaacc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 40950946 - 40951103
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||| ||||||    
T  40950946 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---ataaaaaaataaagaaatcaaaca 40951042  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40951043 gctttaacc--tttttcttaaagagttttattttaactttattttaaagtagcttttagaccg 40951103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8847939 - 8848097
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  8847939 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 8848036  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8848037 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttgtagaccg 8848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 34264704 - 34264550
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||||||||||||    
T  34264704 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccaaaca 34264608  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||| ||       ||||||||| |||||||||||||||| |||||||||||||||||    
T  34264607 gctttaacc--tttttcttaaagagttttattttaactttgtattaaagtagcttttaga 34264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 55188171 - 55188328
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  55188171 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 55188267  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||||||       |||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  55188268 gttttagcc--tttttcttaaagagctttattttaactttattttaaaataatttttagaccg 55188328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6940250 - 6940178
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6940250 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10137955 - 10137883
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10137955 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11967076 - 11966923
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||||||||||||    
T  11967076 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact----aaaaaaaataaagaaaccaaaca 11966981  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    | |||| ||       ||||||||| ||||||||||||||||||||||||| ||||||||    
T  11966980 gttttaacc--tttttcttaaagagttttattttaactttgttttaaagtaacttttaga 11966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17976448 - 17976604
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||||||||||||    
T  17976448 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaagaaaccaaaca 17976543  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17976544 gttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 17976604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36190131 - 36189974
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||            |||||||||||||||    
T  36190131 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 36190035  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||  |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  36190034 gatttgac--atttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 36189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 23628839 - 23628990
Alignment:
Q  4 aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagct 103  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||| |    
T  23628839 aaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaacagtt 23628934  T
Q  104 ttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||          |||||||| ||||||||||||||||||||||||||||||||||||    
T  23628935 tta--agtttttccttaaagaactttattttaactttgttttaaagtagcttttagac 23628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26097723 - 26097651
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  26097723 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 24303875 - 24303720
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||            ||||||||||||| |    
T  24303875 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaata 24303780  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||        ||||||  |||||||||||||||| |||||||||||||||||||||    
T  24303779 gctttagc--tttttccttaaatggctttattttaactttattttaaagtagcttttagacc 24303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11180909 - 11180981
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  11180909 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 37873718 - 37873560
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||||||||||||    
T  37873718 aaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 37873621  T
Q  101 gctttagccnnnnnnncttaaagagcttta-ttttaactttgttttaaagtagcttttagacc 162  Q
    | ||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  37873620 gttttagc--tttttccttaaagagctttatttttaactttgttttaaagtagcttttagacc 37873560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 39651736 - 39651889
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||            |||||||||||||||    
T  39651736 aaaaaaaaaaaaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataactttaactct-------aaaaataaagaaaccaaaca 39651828  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39651829 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 41144377 - 41144305
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  41144377 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43117519 - 43117591
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  43117519 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46045867 - 46045716
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  46045867 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 46045771  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||  |        |||||| ||||||||||||||||||||||||||||||||||||||||    
T  46045770 actttttc--------cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 46045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28361565 - 28361410
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || ||| |||||||||||||||||||||||||||||| ||||||||| |||||||| || | ||||            |||||||||||||||    
T  28361565 aaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattcataactaaaaaaaa----taaagaaaccaaaca 28361470  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||        || |||||||||||||||||||||||||||||||||||||||||||    
T  28361469 gctttagc--tttttcctgaaagagctttattttaactttgttttaaagtagcttttagacc 28361410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 32139419 - 32139573
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact--nnnnnnnnnnnntaaagaaaccaaacagctttagc 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||              | |||||||||||||||||||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaactaaaactaaaaaaaatgaagaaaccaaacagctttagc 32139518  T
Q  109 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
            | |||| | ||||||||||||||||||||||||||||||||||||||    
T  32139519 ttttttttcctaaaaaactttattttaactttgttttaaagtagcttttagaccg 32139573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18138336 - 18138408
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  18138336 aaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20681196 - 20681268
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20681196 aaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22556965 - 22557037
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  22556965 aaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29099697 - 29099625
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29099697 aaaaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32200788 - 32200716
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  32200788 aaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40665522 - 40665593
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  40665522 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40849729 - 40849801
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||||    
T  40849729 aaaaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49125546 - 49125618
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  49125546 aaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 346679 - 346520
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||| ||||||||| | ||||||||| || |||||||||| ||||            |||||||||||||||    
T  346679 aaaaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact-aaaaaaaataataaagaaaccaaaca 346581  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||          |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  346580 gcttta--attttttccttaaagagctttatttttactttgttttaaagtagcttttaaaccg 346520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8151203 - 8151359
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||| ||||            |||||||||||||||    
T  8151203 aaaaaaaaaaaaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaactaaaaaaaaa---taaagaaaccaaaca 8151298  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8151299 actttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8151359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8654386 - 8654320
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  8654386 aaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataacttta 8654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 45019226 - 45019181
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 45019181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 51153499 - 51153552
Alignment:
Q  15 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 51153552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 30206590 - 30206534
Alignment:
Q  719 atattccttttttcagattcatcgaataattcatgtatctcgtttataatatagacc 775  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  30206590 atattccttttttcagattcattgaataattgatgtatctggtttataatatagacc 30206534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 34663936 - 34664012
Alignment:
Q  86 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34663936 taaagaaaccaaacaactttagcctttttt-cttaaagagctttattttaactttattttaaagtagcttttagaccg 34664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 32200679 - 32200633
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32200679 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 32200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 52620733 - 52620779
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  52620733 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 52620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34663871 - 34663912
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34663871 aaaaaataataaattcaaagttttgtacaatattttgccaaa 34663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45472509 - 45472468
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45472509 aaaaaataataaattcaaagttttgtacaatattttgccaaa 45472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51187618 - 51187683
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 66  Q
    |||||||| |||||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  51187618 aaaaaatattaaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataactt 51187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24631173 - 24631102
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||||||  |||||||||    
T  24631173 aaaaaataataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaatagttttaaaact 24631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 25881932 - 25881992
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataaatgtaaaact 25881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 30071346 - 30071414
Alignment:
Q  5 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||| ||||    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 34664934 - 34664978
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34664934 ttaaagaactttattttaactttgttttaaagtagcttttagacc 34664978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 18138452 - 18138495
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttagac 18138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 49125663 - 49125706
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttagac 49125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 10581946 - 10581901
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10581946 ttaaagagctttattttaattttgttttaaagtagtttttagaccg 10581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52620639 - 52620680
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  52620639 aaaaaataataaattcagagttttgtacaatattttgccaaa 52620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  21 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10262069 - 10262027
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10262069 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 10262027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21562386 - 21562428
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  21562386 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 21562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24080140 - 24080098
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24080140 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 24080098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43329907 - 43329949
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43329907 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 43329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 20681304 - 20681348
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  20681304 ttaaagagctttattt-aactttattttaaagtagcttttagaccg 20681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 29346287 - 29346227
Alignment:
Q  12 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  29346287 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 29346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 35832051 - 35831991
Alignment:
Q  12 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  35832051 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 35831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 44856696 - 44856741
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  44856696 ttaaagggctttattttaactttgttttaaaggagcttttaaaccg 44856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9097541 - 9097470
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||||||| ||| ||||||    
T  9097541 aaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagcttgaaaact 9097470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26927010 - 26926968
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26927010 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 26926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 43117629 - 43117668
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttt 156  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  43117629 cttaaaaagctttattttaactttgtttttaagtagcttt 43117668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51449973 - 51450015
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  51449973 aaaaaataataaatttaaagttt-gtacaatattttgccaaaca 51450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 8654276 - 8654230
Alignment:
Q  118 ttaaagagctttattttaactttgtttt-aaagtagcttttagaccg 163  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  8654276 ttaaagggctttattttaactttgttttaaaagtaacttttagaccg 8654230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 9097433 - 9097387
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  9097433 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 9097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 24631064 - 24631018
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| | |||||||||||||||| || ||||||||||||||||||    
T  24631064 cttaaaaacctttattttaactttgattcaaagtagcttttagaccg 24631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 41106052 - 41106098
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||||||    
T  41106052 cttaaagggctttattttatctttgttttaaaggagtttttagaccg 41106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 41105971 - 41106012
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaa 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  41105971 aagttttatacaatattttgccaaacaacttttaacttaaaa 41106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 3e-44; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7274673 - 7274831
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  7274673 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 7274770  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7274771 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 970956 - 971142
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  970956 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 971053  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaa 191  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  971054 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacctaa 971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8878122 - 8878280
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  8878122 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 8878219  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8878220 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8878280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36086019 - 36085861
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  36086019 aaaaagtaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaataaataaagaaaccaaaca 36085922  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36085921 gctttagcc--tttttcttaaagatctttattttaactttgttttaaagtagcttttagaccg 36085861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 4631211 - 4631369
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact-nnnnnnnnnnnntaaagaaaccaaac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             ||||||||||||||    
T  4631211 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaataaaataaagaaaccaaac 4631310  T
Q  100 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  4631311 agctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4631369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24926157 - 24926005
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  24926157 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 24926061  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    |||||||||       |||||||||||||||||||||||||||| |||||||||||||    
T  24926060 gctttagcc--tttttcttaaagagctttattttaactttgtttaaaagtagctttta 24926005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1835688 - 1835844
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||| ||||||||||    
T  1835688 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaa----aaaaaaaccaaaca 1835783  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  1835784 actttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1835844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31972285 - 31972442
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  31972285 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 31972381  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||||||||||||||||||||||||||||||||||||| ||||    
T  31972382 gctttaac--atttttcttaaagagctttattttaactttgttttaaagtagcttttaaaccg 31972442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5166269 - 5166427
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  5166269 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 5166366  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||  ||       ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5166367 gcttttacc--tttttcttaaagagctttattttaactttgttttaaagtagctttttgaccg 5166427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8683662 - 8683819
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||            ||||||||||||| |    
T  8683662 aaaaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaata 8683758  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8683759 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3243367 - 3243209
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  3243367 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 3243270  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  3243269 gcttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3324336 - 3324178
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  3324336 aaaaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 3324239  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  3324238 gctttaacctttttt--ttaaagagctttattttaactttgttttaaagtagcttttagaccg 3324178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18166905 - 18166749
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||| |||||    
T  18166905 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaacgaaaca 18166810  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||        ||||||| |||||||||||||||||||||||||| |||||||||||    
T  18166809 gctttagcctttttt--ttaaagaactttattttaactttgttttaaagtaacttttagaccg 18166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3079720 - 3079876
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||||||||||||    
T  3079720 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaagaaaccaaaca 3079815  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  3079816 gttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7233026 - 7233098
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7233026 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34912654 - 34912810
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  34912654 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 34912749  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  34912750 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 34912810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 668366 - 668206
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||||||||||||    
T  668366 aaaaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaactaaaaaaaaaaaataaagaaaccaaaca 668267  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||||        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  668266 actttagc--ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17032885 - 17032728
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||            |||||||||||||||    
T  17032885 aaaaaaaaaaaaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact---aaaaaaaattaaagaaaccaaaca 17032789  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17032788 actttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 40202218 - 40202374
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  40202218 aaaaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 40202313  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  40202314 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 40202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 20313294 - 20313162
Alignment:
Q  27 acaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagc 126  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       ||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa--taaagaaaccaaacagctttagccttttt--cttaaagagc 20313199  T
Q  127 tttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20313198 tttattttaactttgttttaaagtaacttttagaccg 20313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 36078628 - 36078481
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||             ||||||| ||||||    
T  36078628 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaactaaaaaa-------aaagaaatcaaaca 36078536  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  36078535 gctttagc---ttttttttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10120612 - 10120770
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  10120612 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact--aaaaaattaataaagaaaccaaaca 10120709  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||          ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10120710 gcttta--attttttccttaaagagttttattttaattttgttttaaagtagcttttagaccg 10120770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38879139 - 38879211
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  38879139 aaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9799397 - 9799239
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||| |||||||||| |            |||||||||||||||    
T  9799397 aaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaactttaaaattaaaaacaaaaaataaagaaaccaaaca 9799298  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    | |||| |        || |||||||||||||||| |||||||||||||||||||||||||    
T  9799297 gttttaac--ttctttctcaaagagctttattttatctttgttttaaagtagcttttagac 9799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 1117981 - 1118136
Alignment:
Q  1 aaaaaataataaattcaaagttt--tgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaa 98  Q
    ||||||||||||||||||||||   |||||||||||||| |||||| ||||||||| ||||||||||||| ||||            ||||||||| |||    
T  1117981 aaaaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaactaaa 1118076  T
Q  99 cagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||    
T  1118077 cagctttagc--tttttccttaaagagttttattttaactttgttttaaagtagcttttaga 1118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35423789 - 35423939
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| | ||||            |||||||||||||||    
T  35423789 aaaaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact----aaaataaataaagaaaccaaaca 35423884  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||  |         ||||||||||||||||||||||||||||||||||||||||||||||    
T  35423885 actttttc--------tttaaagagctttattttaactttgttttaaagtagcttttagaccg 35423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41452818 - 41452974
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41452818 aaaaaaaaaaaaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41452913  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41452914 actttaac--tttttccttaaagagttttattttaactttgttttaaagtagctttaagaccg 41452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45474725 - 45474797
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  45474725 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 17051110 - 17051064
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17051110 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 17051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 38959687 - 38959564
Alignment:
Q  30 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 129  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||            ||||||||||||||| ||||||||       |||||||||||||    
T  38959687 atattttgtcaaacagcttttaactcaaaaataattttagaactaaaaaaaaa---taaagaaaccaaacaactttagccttttt--cttaaagagcttt 38959593  T
Q  130 attttaactttgttttaaagtagctttta 158  Q
    |||||||||||||||||||||||||||||    
T  38959592 attttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2180021 - 2180093
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||| ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  2180021 aaaaaaaaaaaaaatcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3708454 - 3708496
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  3708454 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 3708496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11868962 - 11868920
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  11868962 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 11868920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17051210 - 17051167
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  17051210 aaaaaataataaattctatgttttgtacaatattttgccaaaca 17051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35360355 - 35360313
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  35360355 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 35360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  8 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 65  Q
    |||||| ||||| |||||||||| |||||||||||||  |||||||| ||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35287377 - 35287306
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||||||||||||| |||||||||||| ||||||| | ||||||| |||| || ||||||||||    
T  35287377 aaaaaaaaaaaaattcaaagttt-gtacaatatttttccaaacaacatttaacttaaaagtagctttaaaact 35287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 1692675 - 1692624
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  1692675 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 1692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 35287269 - 35287226
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  35287269 cttaaaggcctttattttaactttgttttaaagtaacttttaga 35287226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 2180132 - 2180178
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  2180132 cttaaagagctttattttaaatttattttatagtagtttttagaccg 2180178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 13549536 - 13549490
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  13549536 cttaaagagttttattttaactttgttttaaaataatttttagaccg 13549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 32292307 - 32292345
Alignment:
Q  125 gctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  32292307 gctttattttaactttgttttaaagtaactttaagaccg 32292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 38879249 - 38879291
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttag 159  Q
    ||| |||| ||||||||||||||| ||||||||||||||||||    
T  38879249 ctttaagaactttattttaactttattttaaagtagcttttag 38879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 45474836 - 45474870
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagta 151  Q
    |||||||||||||||||||||||| ||||||||||    
T  45474836 cttaaagagctttattttaactttattttaaagta 45474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 2e-42; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 54510459 - 54510302
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||||||||||||    
T  54510459 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa---aaagaaaccaaaca 54510363  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54510362 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 54741806 - 54741966
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  54741806 aaaaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaataaagaaaccaaaca 54741905  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54741906 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 29500335 - 29500493
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  29500335 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 29500432  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  29500433 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 29500493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30269156 - 30268998
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  30269156 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 30269059  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269058 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 45599339 - 45599181
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  45599339 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 45599242  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  45599241 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 45599181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53022669 - 53022826
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  53022669 aaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 53022765  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53022766 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53022826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22347152 - 22346994
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaata-ttttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaac 99  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||            ||||||||||||||    
T  22347152 aaaaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaac 22347056  T
Q  100 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  22347055 agctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 22346994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4018919 - 4019077
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||| ||||||    
T  4018919 aaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaatcaaaca 4019016  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4019017 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4019077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7040884 - 7041041
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7040884 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 7040980  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7040981 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36592288 - 36592131
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||            |||||||||||||||    
T  36592288 aaaaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 36592192  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  36592191 gctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 36592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14587459 - 14587301
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||||| |||| |    
T  14587459 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaatcaaata 14587362  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  14587361 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 14587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48545112 - 48545270
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  48545112 aaaaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 48545209  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48545210 gctttaacc--tttttcttaaagagctttattttaattttgttttaaagtagcttttagaccg 48545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52461030 - 52461188
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||| ||||||    
T  52461030 aaaaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaatcaaaca 52461127  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | ||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  52461128 gttttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 39721262 - 39721418
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  39721262 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 39721357  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||         |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39721358 gctttag--ttttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7265058 - 7265215
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||            |||||||||||||||    
T  7265058 aaaaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 7265154  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  7265155 actttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7265215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 50739157 - 50739313
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50739157 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50739252  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50739253 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50739313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 50773698 - 50773542
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50773698 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50773603  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50773602 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50773542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52674786 - 52674942
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||            |||||||||||||||    
T  52674786 aaaaaataataaattcaaagttttgtacaatattttgccaaacag-ttttaactcaaaaataactttagtact---acaaaaaaataaagaaaccaaaca 52674881  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  52674882 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33932558 - 33932402
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  33932558 aaaaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 33932463  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |       |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  33932462 gctttagtc--tttttcttaaagagctttattttaactttgttttagagtagtttttagaccg 33932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2909435 - 2909592
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |            |||||||||||||||    
T  2909435 aaaaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaatt--aaaaaacaaataaagaaaccaaaca 2909532  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| ||       ||| |||||||||||||||||||||||||||||||||||||||||    
T  2909533 gctttaacc-tttttccttgaagagctttattttaactttgttttaaagtagcttttagac 2909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26881624 - 26881780
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||            |||| ||||||||||    
T  26881624 aaaaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact----aaaaaaaataaataaaccaaaca 26881719  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  26881720 actttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 26881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29450662 - 29450817
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |            |||||||||||||||    
T  29450662 aaaaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaatt--aaaaaaaaaataaagaaaccaaaca 29450759  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||| ||       |||||||| |||||||||||||||||||||||||||||||||||    
T  29450760 gctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19536710 - 19536866
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||            |||||||| ||||||    
T  19536710 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact----aaaaaaaataaagaaatcaaaca 19536805  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19536806 gctttagcc--tttttcttaaagaactttattttaactttgttttaaattagcttttagaccg 19536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 48961122 - 48961276
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||              |||||||| ||||||    
T  48961122 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa------aaaaataataaagaaatcaaaca 48961215  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  48961216 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 48961276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20849476 - 20849404
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  20849476 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46090190 - 46090118
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46090190 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13450275 - 13450347
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  13450275 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 15496541 - 15496385
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacag 101  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||| || || ||||||||||||| ||||            ||||||||||||||||    
T  15496541 aaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacag 15496445  T
Q  102 ctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  15496444 ctttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 15496385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36987810 - 36987654
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  36987810 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 36987715  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36987714 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 36987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37013249 - 37013093
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  37013249 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 37013154  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37013153 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37013093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42187821 - 42187665
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  42187821 aaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataaagaaaccaaaca 42187726  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||        |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  42187725 gctttagcctttttt--ttaaagggctttatttaaactttgttttaaagtagcttttaaaccg 42187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43316588 - 43316516
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  43316588 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 46757562 - 46757720
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||            |||| |||| |||||    
T  46757562 aaaaaataataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact-gaaaaaaaaaataaaaaaactaaaca 46757659  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |       |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  46757660 gctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtagcttttaaaccg 46757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 47719487 - 47719641
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| || |            |||||||| |||| |    
T  47719487 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaatcaaata 47719582  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| |        |||||||||||||||||||||||||||||||||||||||||||||    
T  47719583 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagac 47719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12101536 - 12101464
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  12101536 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35690284 - 35690212
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  35690284 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38361753 - 38361910
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  38361753 aaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaactaaaaaaaa----taaagaaaccaaaca 38361848  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       || ||  |  |||||||||||||||||||||||||||||||||||||    
T  38361849 gcttta-cctttttccctaaagaaattttattttaactttgttttaaagtagcttttagaccg 38361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41990836 - 41990680
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41990836 aaaaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41990741  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  41990740 actttaac--ttttttcttatagaactttattttaactttgttttaaagtagcttttagaccg 41990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46850783 - 46850711
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  46850783 aaaaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44762795 - 44762728
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44762795 aaaatataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 44762728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 37413574 - 37413724
Alignment:
Q  3 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            || ||||||||||||||    
T  37413574 aaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact---aaaagaaaatatagaaaccaaacagc 37413670  T
Q  103 tttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||||        |||||||  |||||||||||||||||||||||||||||||||    
T  37413671 tttagc--ttttttcttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54113415 - 54113487
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  54113415 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 54203818 - 54203667
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||||||||| |    
T  54203818 aaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaaa 54203721  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    | |||  |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  54203720 gttttttc--------cttaaagagctttattttaactttgttttaaagtagcttttagacc 54203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13337102 - 13337173
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||||    
T  13337102 aaaaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50933207 - 50933279
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||| |||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  50933207 aaaaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 875880 - 875926
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  875880 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 33899842 - 33899986
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnn 112  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||| ||||||        
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataaagaaaccaaacagttttagc--tt 33899935  T
Q  113 nnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
        |||||| | |||||||||||||||||||||||||| |||||||||||    
T  33899936 ttttcttaaaaaactttattttaactttgttttaaagtaacttttagaccg 33899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 12101423 - 12101377
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12101423 cttaaagggctttattttaactttgttttaaagtagcttttagaccg 12101377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12996883 - 12996818
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 67  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||    
T  12996883 aaaaagtaataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 35529818 - 35529773
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  35529818 ttaaagggctttattttaactttgttttaaagtagcttttagaccg 35529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 875840 - 875884
Alignment:
Q  8 aataaattcaaagttttgtacaatattttgccaaacagcttttaa 52  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  875840 aataaattcaaagttttgtacaatattttgccaaacagctcttaa 875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 10617639 - 10617695
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaatagttttaaaact 10617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20996406 - 20996334
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||||||||| ||||||||||||||||| |||||| ||||||| | ||||||||||||| ||||    
T  20996406 aaaaaaaaaaaaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35906756 - 35906684
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||| |||||||||||||||||||||||||| ||| || ||||||| | |||||||| |||| ||||    
T  35906756 aaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54835729 - 54835801
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||| ||||| |||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  54835729 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataggtttaaaact 54835801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 8238921 - 8238972
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  8238921 tttgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||||||| ||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 54195754 - 54195692
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 63  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |  |||||||| ||||||||    
T  54195754 aaaaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataa 54195692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 46850674 - 46850630
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||    
T  46850674 cttaaagacctttattttaactttgttttaaaatagcttttagac 46850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 13450390 - 13450432
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  13450390 cttaaagagcttt-ttttaactttgttttaaagtagcttttaga 13450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44075456 - 44075414
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  44075456 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 44075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 54113531 - 54113603
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 189  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||       ||||| |||||||||||||    
T  54113531 cttaaaggactttattttaactttgttttaaagtagtttttagaccgaaaaaaagtctggtcaaacggtacct 54113603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 34433501 - 34433455
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||    
T  34433501 cttaaaggactttatttaaactttgttttaaagtagcttttagaccg 34433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 35690164 - 35690122
Alignment:
Q  121 aagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagaccg 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 44541231 - 44541277
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||    
T  44541231 cttaaagaactttattttaactttgttttaaaagagcttttagaccg 44541277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 46090078 - 46090037
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  46090078 cttaaagcgctttgttttaactttgttttaaagtagctttta 46090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 54796000 - 54795955
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||    
T  54796000 cttaaagacctttattttaactttgttttgaagtaacttttagacc 54795955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 10617736 - 10617768
Alignment:
Q  119 taaagagctttattttaactttgttttaaagta 151  Q
    |||||||||||||||||||||||||||||||||    
T  10617736 taaagagctttattttaactttgttttaaagta 10617768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34433803 - 34433767
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttg 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34433803 aaaaaataataaattaaaagttttgtacaatattttg 34433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 22762347 - 22762296
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  22762347 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 22762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 50933332 - 50933367
Alignment:
Q  127 tttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||||||||||||||| |||||||||||||||    
T  50933332 tttattttaactttgttttagagtagcttttagacc 50933367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 54796088 - 54796037
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | |||| || ||||||| ||||||||||    
T  54796088 tttgtacaatattttgccaaacaacatttaccttaaaaatatctttaaaact 54796037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 916278 - 916315
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgcc 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  916278 aaaaaataataaattcaaag-tttgtacaatattttgcc 916315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 32754259 - 32754305
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  32754259 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 32754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 44541140 - 44541194
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 72  Q
    |||||||| |||||||||||||||||| |||| |||   ||||||||||||||||    
T  44541140 aagttttggacaatattttgccaaacaactttcaacctcaaaataactttaaaac 44541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 46088672 - 46088609
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 189  Q
    ||||||||||||||| ||||||||||||||||| ||||       ||||| |||||||||||||    
T  46088672 ctttattttaactttattttaaagtagcttttacaccgaaaataagtctggtcaaacggtacct 46088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 52464928 - 52464882
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  52464928 cttaaaggtctttattttaactttgttttcaagtaacttttagaccg 52464882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 774
Target Start/End: Original strand, 19996068 - 19996117
Alignment:
Q  725 cttttttcagattcatcgaataattcatgtatctcgtttataatatagac 774  Q
    ||||||| |||||||| |||||||| |||||||| | |||||||||||||    
T  19996068 ctttttttagattcattgaataattgatgtatctagattataatatagac 19996117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 20849354 - 20849317
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  20849354 ctttattttaacttttttttaaagtaacttttagaccg 20849317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 47670486 - 47670453
Alignment:
Q  127 tttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||||||||||||||||| |||||||||||    
T  47670486 tttattttaactttgttttaaaatagcttttaga 47670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25710 - 25869
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  25710 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 25808  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  25809 gctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 25869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 8e-42; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 12907912 - 12908069
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  12907912 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 12908008  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  12908009 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 12908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32960868 - 32960712
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  32960868 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 32960772  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32960771 gctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagacc 32960712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 27031301 - 27031149
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  27031301 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 27031203  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttt 156  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  27031202 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29448789 - 29448631
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  29448789 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 29448692  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29448691 gctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 29448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38045658 - 38045815
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  38045658 aaaaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 38045754  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38045755 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 38045815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40239969 - 40239811
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  40239969 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--acaaaaaaaataaagaaaccaaaca 40239872  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    | |||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40239871 gttttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 40789180 - 40789366
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  40789180 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact---aaaaaaaaataaagaaaccaaaca 40789276  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaa 192  Q
    |||||| ||       |||||||| ||||||||||||||||||||||||| ||||||||||||       ||||| ||||||||||||||||    
T  40789277 gctttaacc--tttttcttaaagaactttattttaactttgttttaaagttgcttttagaccgaaaaaaagtctggtcaaacggtacctaaa 40789366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18956370 - 18956216
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  18956370 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 18956275  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||| |       |||||||||||||||||||||||||||||||||||||||||||||    
T  18956274 gctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 18956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10999113 - 10999271
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||||||||||||    
T  10999113 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaata--aaagaaaccaaaca 10999210  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10999211 gctttggcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 10999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37669341 - 37669184
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |            |||||| ||||||||    
T  37669341 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaatt---aaaaaaaaataaagataccaaaca 37669245  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37669244 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37669184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43156193 - 43156349
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  43156193 aaaaaataataa-ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 43156288  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43156289 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43156349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 17278155 - 17278340
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||| ||| ||||||    
T  17278155 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaa-aaaaaaatcaaaca 17278253  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 189  Q
    ||||| |||       ||||||||||||||||| |||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  17278254 gctttggcc--tttttcttaaagagctttatttcaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 17278340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41426964 - 41427120
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  41426964 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaagaaaccaaaca 41427060  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| |        ||||||||  |||||||||||||||||||||||||||||||||||||    
T  41427061 gctttaac--ttttttcttaaaga-atttattttaactttgttttaaagtagcttttagaccg 41427120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 23639487 - 23639333
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             ||||||||||||||    
T  23639487 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaaaa---aaagaaaccaaaca 23639391  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
     ||||||||       |||||||| ||||||||||||||||||||||||||||| |||||    
T  23639390 actttagcc--tttttcttaaagaactttattttaactttgttttaaagtagctcttaga 23639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1448101 - 1448258
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||            |||||||||||||||    
T  1448101 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact---aaaaaaaaataaagaaaccaaaca 1448197  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||| |||||       || |||||| |||||||||||||||||||||| ||||||||| ||||    
T  1448198 gctctagcc--tttttctgaaagagatttattttaactttgttttaaaatagcttttaaaccg 1448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 4408107 - 4407957
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||             ||| ||||||||||    
T  4408107 aaaagataataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactttaaaactaaaaa--------aaataaaccaaaca 4408017  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  4408016 gctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 4407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41343392 - 41343235
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||            ||||||||| |||||    
T  41343392 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact---aaaacaaaataaagaaacaaaaca 41343296  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41343295 actttagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 41343235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45620650 - 45620717
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45620650 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataacttta 45620717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4400137 - 4399981
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  4400137 aaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----gaaaaaaataaagaaaccaaaca 4400042  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4400041 actttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 4399981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 4406699 - 4406541
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||  ||||            |||||||| ||||||    
T  4406699 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact--aaaaaaaaaataaagaaaacaaaca 4406602  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  4406601 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 4406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20482280 - 20482352
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||    
T  20482280 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4615393 - 4615454
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 62  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4615393 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44651954 - 44651882
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||    
T  44651954 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47840731 - 47840803
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  47840731 aaaaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 40036083 - 40035944
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 116  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||            |||||||| ||||||||||||  |           
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact-----ataaaaataaagaaatcaaacagcttta--cctttttt 40035991  T
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40035990 cttaaagagttttattttaactttattttaaagtagcttttagaccg 40035944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6607097 - 6607169
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| |||| ||||    
T  6607097 aaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36769226 - 36769298
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||||| ||||    
T  36769226 aaaaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4404295 - 4404447
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||  | |||| ||||            |||||||||||||||    
T  4404295 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa--attttagaactaaaaaaaa----taaagaaaccaaaca 4404388  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| |        |||||| | ||||||||||||||||||||||||||||||||||||    
T  4404389 gctttaac--tttttccttaaataactttattttaactttgttttaaagtagcttttagac 4404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4492506 - 4492356
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||| ||| ||||            ||||||| |||||||    
T  4492506 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact----aaaaaaaataaagaatccaaaca 4492412  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  4492411 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5483406 - 5483562
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||             |||||||||||||||    
T  5483406 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac--aaaaaaaaatataaagaaaccaaaca 5483503  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| |        ||| ||||| |||||||||||||||||||||||||||||||||||    
T  5483504 gctttaac--tttttcctttaagagttttattttaactttgttttaaagtagcttttagac 5483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21134427 - 21134356
Alignment:
Q  2 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| || ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  21134427 aaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5526108 - 5526177
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||| ||||    
T  5526108 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 16933447 - 16933401
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16933447 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16933401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 16938830 - 16938784
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16938830 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 3840021 - 3840090
Alignment:
Q  4 aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| || ||||||||||||||||||||||||| |||||| ||||||||| ||||||| || |||||||    
T  3840021 aaatattagattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaatagctgtaaaact 3840090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 20135077 - 20135005
Alignment:
Q  86 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||    
T  20135077 taaagaaaccaaacagctttagc--ttttttcttaaagggctttattttaactttgttttaaagtagcttttaga 20135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20135148 - 20135099
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagctttt 50  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  20135148 aaaaaatattaaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43111035 - 43111076
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43111035 aaaaaataataaattcaaagttttgtacaatattttgccaaa 43111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 43111100 - 43111175
Alignment:
Q  86 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||| |||||||||||||||||||       |||||||||||||||||||| |||||||| |||||||||||||||||    
T  43111100 taaaaaaaccaaacagctttagccttttt--cttaaagagctttattttaattttgttttgaagtagcttttagaccg 43111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 36765688 - 36765734
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36765688 cttaaagaactttattttaactttgttttaaaatagcttttagaccg 36765734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 44651839 - 44651793
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  44651839 cttaaagggctttattttaactttgttttaaagtaacttttagaccg 44651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 23154745 - 23154789
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  23154745 cttaaataactttattttaactttgttttaaagtagcttttagac 23154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19036402 - 19036360
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19036402 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 19036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20718234 - 20718276
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20718234 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 20718276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29488481 - 29488523
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  29488481 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 29488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33232697 - 33232655
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33232697 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 33232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34284839 - 34284797
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34284839 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 34284797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 42915378 - 42915429
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  42915378 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23154654 - 23154707
Alignment:
Q  19 agttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||| ||||    
T  23154654 agttttgtacaatattttgccaaacaacttttaact-taaaataactttagaact 23154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 37143542 - 37143584
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  37143542 ttaaagagttttattttaactttattttaaagtagcttttaga 37143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 38049198 - 38049152
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  38049198 cttaaagagctttattttaactttgttttaaattaggttttataccg 38049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 38049299 - 38049237
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||| |||||| ||||||||||||| ||||||| ||||||| | |||||||| |||||||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 42828845 - 42828799
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  42828845 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 42828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 4616173 - 4616218
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  4616173 ttaaagagctttattttaattttgttttaaagtattttttagaccg 4616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 5526226 - 5526259
Alignment:
Q  127 tttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||||||||||||||||||||||||||    
T  5526226 tttattttaactttgttttaaagtagcttttaga 5526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16933541 - 16933500
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  16933541 aaaaaataataaattcaatgttttgtacaatattttgtcaaa 16933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16938924 - 16938883
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaa 42  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  16938924 aaaaaataataaattcaatgttttgtacaatattttgtcaaa 16938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 17816601 - 17816661
Alignment:
Q  12 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  17816601 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 17816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19050400 - 19050340
Alignment:
Q  12 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  19050400 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 19050340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 36769344 - 36769381
Alignment:
Q  124 agctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36769344 agctttattttaactttgttttaaaatagcttttagac 36769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 3840137 - 3840169
Alignment:
Q  126 ctttattttaactttgttttaaagtagctttta 158  Q
    |||||||||||||||||||||||||||||||||    
T  3840137 ctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||  ||||||| |||||| ||||||||| ||||||||||||| ||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 157
Target Start/End: Original strand, 20482404 - 20482435
Alignment:
Q  126 ctttattttaactttgttttaaagtagctttt 157  Q
    ||||||||||||||||||||||||||||||||    
T  20482404 ctttattttaactttgttttaaagtagctttt 20482435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20762915 - 20762957
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 44  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  20762915 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 20762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 15641229 - 15641275
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  15641229 cttaaagaactttattgtaactttgtattaaaatagcttttagaccg 15641275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 47171750 - 47171796
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  47171750 cttaaaggtctttattttaactttgttttgaagtaacttttagaccg 47171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 40332296 - 40332345
Alignment:
Q  726 ttttttcagattcatcgaataattcatgtatctcgtttataatatagacc 775  Q
    |||||||| |||||| ||||||||||||||| |  |||||||||||||||    
T  40332296 ttttttcaaattcattgaataattcatgtatatgatttataatatagacc 40332345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 8e-42; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 7833548 - 7833705
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||            |||||||||||||||    
T  7833548 aaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 7833644  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7833645 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7833705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17585518 - 17585675
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  17585518 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 17585614  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17585615 gctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 17585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41901772 - 41901614
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  41901772 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 41901675  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41901674 gctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41901614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38802308 - 38802464
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  38802308 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 38802404  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  38802405 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 38802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43120851 - 43120693
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||             |||||||||||||||    
T  43120851 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac--aaaaaaaaaaataaagaaaccaaaca 43120754  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43120753 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9574864 - 9575021
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  9574864 aaaaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 9574960  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  9574961 actttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 9575021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25659882 - 25659724
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||| ||||||||||    
T  25659882 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaataaaataaataaaccaaaca 25659785  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  25659784 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 25659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33373892 - 33373735
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  33373892 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 33373796  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33373795 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 33373735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33895289 - 33895131
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  33895289 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 33895192  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33895191 gctttaatc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39327115 - 39326959
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  39327115 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 39327020  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  39327019 actttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 39326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 46588163 - 46587978
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  46588163 aaaaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 46588068  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaa 192  Q
    |||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||       ||||| ||||||||||||||||    
T  46588067 gctttagcc--tttttcttaaagagctttattttaactttgttttagagtagcttttagaccgaaaaaaagtctggtcaaacggtacctaaa 46587978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11754300 - 11754146
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||| |||||||||    
T  11754300 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagtaaccaaaca 11754204  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  11754203 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 11754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 3265119 - 3265276
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  3265119 aaaaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 3265215  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  3265216 gctttagcc--tttttcttaaagaactttattttaactttgttttagagtagcttttagaccg 3265276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11583159 - 11583314
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  11583159 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 11583254  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||| |||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11583255 gctttggcc--tttttcttaaagagctttattttaa-tttgttttaaagtagcttttagaccg 11583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33642613 - 33642770
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||| ||||||||||    
T  33642613 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa-aaaccaaaca 33642709  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33642710 gctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40432275 - 40432113
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta--aaactnnnnnnnnnnnntaaagaaaccaaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |            |||||||||||||    
T  40432275 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttattagaattaaaaaaaaaaataaagaaaccaaa 40432176  T
Q  99 cagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40432175 cagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45104183 - 45104337
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  45104183 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 45104279  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
     ||||| ||       |||||||||||||||||||||||||||| |||||||||||||||    
T  45104280 actttaacc--tttttcttaaagagctttattttaactttgtttaaaagtagcttttaga 45104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14487396 - 14487239
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||            |||| ||||||||||    
T  14487396 aaaaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaaaaaaccaaaca 14487300  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14487299 gctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttaaaccg 14487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 47037203 - 47037045
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||| ||||||    
T  47037203 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaatcaaaca 47037105  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||| ||       |||||| ||||||||||||||||||||||||||||||||||||||||    
T  47037104 gctttaacc--tttttcttaaa-agctttattttaactttgttttaaagtagcttttagaccg 47037045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17249038 - 17249195
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            |||||||||||||||    
T  17249038 aaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---gaaaaaaaataaagaaaccaaaca 17249134  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17249135 gctttagcc--tttttcttaaagggctttattttaactttgttttaaagtagcttttacaccg 17249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33894159 - 33894008
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  33894159 aaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaattaaagaaaccaaaca 33894062  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33894061 gcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33894008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36165593 - 36165435
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            |||||||||||||||    
T  36165593 aaaaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaagaaaccaaaca 36165495  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
     ||||||||       |||||| ||||||||||||||||| ||||||| |||||||||||||    
T  36165494 actttagcc--tttttcttaaaaagctttattttaactttattttaaaatagcttttagacc 36165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33831997 - 33831845
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||||||||||||    
T  33831997 aaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaatta-aaagaaaccaaaca 33831899  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33831898 gcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33831845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33818166 - 33818010
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||| ||| ||||||    
T  33818166 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaaaaaatcaaaca 33818071  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33818070 actttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33818010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33877634 - 33877478
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||| ||| ||||||    
T  33877634 aaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaaaaaatcaaaca 33877539  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
     |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33877538 actttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 43123042 - 43123193
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43123042 aaaaaataa-aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 43123136  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||| |||        |||||| ||||||||||||||||||||||||||||||||||    
T  43123137 gcttttgccttttttt-ttaaagggctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43119186 - 43119032
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43119186 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaattaaagaaaccaaaca 43119090  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    | |||| |        ||||||||| |||||||||| |||||||||||||||||||||||    
T  43119089 gttttaac--ttttttcttaaagagttttattttaattttgttttaaagtagcttttaga 43119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24473623 - 24473551
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  24473623 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46040558 - 46040486
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46040558 aaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 16097358 - 16097502
Alignment:
Q  14 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnn 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            ||||||||||||||||||| ||||        
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact-aaaaaaaaaaataaagaaaccaaacagcttcagcc--tt 16097454  T
Q  114 nnncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
       |||||||  ||||||||||||||||||||||||||||||||||||    
T  16097455 tatcttaaaggactttattttaactttgttttaaagtagcttttagac 16097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 31215907 - 31215782
Alignment:
Q  30 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 129  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31215813  T
Q  130 attttaactttgttttaaagtagcttttaga 160  Q
    |||||||||||||||||||||||||||||||    
T  31215812 attttaactttgttttaaagtagcttttaga 31215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 30 - 160
Target Start/End: Complemental strand, 31221662 - 31221537
Alignment:
Q  30 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 129  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31221568  T
Q  130 attttaactttgttttaaagtagcttttaga 160  Q
    |||||||||||||||||||||||||||||||    
T  31221567 attttaactttgttttaaagtagcttttaga 31221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36952785 - 36952718
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  36952785 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattta 36952718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18091277 - 18091348
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  18091277 aaaaaataataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31638487 - 31638331
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||  ||| | ||            |||||||||||||||    
T  31638487 aaaaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataaagttagagct----aaaaaaaataaagaaaccaaaca 31638392  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31638391 gctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 31638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39879212 - 39879140
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  39879212 aaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 17366411 - 17366271
Alignment:
Q  15 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 114  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| || |            ||||||||||||||| |||||  |         
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacaacttta--cttttt 17366318  T
Q  115 nncttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
      |||||||||||||||||||||||||||||||||||||||||||||    
T  17366317 tccttaaagagctttattttaactttgttttaaagtagcttttagac 17366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1322597 - 1322525
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||    
T  1322597 aaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34652277 - 34652341
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 65  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  34652277 aaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34078285 - 34078352
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  34078285 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataacttta 34078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 23730359 - 23730210
Alignment:
Q  8 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaagaaaccaaacagcttta 106  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||||            ||||||||||||||| |||||    
T  23730359 aataatttcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttcaaaact---aaaaaacaataaagaaaccaaacaacttta 23730264  T
Q  107 gccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||        ||||||||||||||||||||||||| |||||||||||||||||||||    
T  23730263 gc--ttattccttaaagagctttattttaactttg-tttaaagtagcttttagaccg 23730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 11606534 - 11606467
Alignment:
Q  6 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| | | ||||| ||||||||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 39729262 - 39729120
Alignment:
Q  15 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 114  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| || |            ||||||||||||||||||||| |          
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacagctttaactttttc 39729167  T
Q  115 nncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
       ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39729166 t--ttaaagagctttattttaattttgttttaaagtagcttttagaccg 39729120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 33933029 - 33933072
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 36952673 - 36952630
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  36952673 ttaaagaactttattttaactttgttttaaagtagcttttagac 36952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7308404 - 7308331
Alignment:
Q  1 aaaaaataataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || |||||||||  |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  7308404 aaaaaaaaaaaaattcaaaaattttgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 44819865 - 44819821
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  44819865 cttaaatacctttattttaactttgttttaaagtagcttttagac 44819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 45589729 - 45589773
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  45589729 cttaaagggctttattttaactttgttttaaagtaacttttagac 45589773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 28568805 - 28568754
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  28568805 tttgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 34652388 - 34652431
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagac 161  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  34652388 ttaaagaactttattttaactttgttttaaagtagtttttagac 34652431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43124356 - 43124419
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 64  Q
    ||||||||| ||||||||| |||| || ||||||||||||||||  |||||||| |||||||||    
T  43124356 aaaaaataaaaaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataac 43124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 46040448 - 46040405
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  46040448 cttaaagggctttattttaactttgttttaaaatagcttttaga 46040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 16033054 - 16033008
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  16033054 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 16033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 39879102 - 39879056
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||    
T  39879102 cttaaagagttttattttaactttgttttaaagtaatttttagaccg 39879056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 17670009 - 17670058
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 71  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||    
T  17670009 tttgtacaatattttgccaaacaacatttaacttaaaagtaactttaaaa 17670058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 40648535 - 40648494
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagctttta 158  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  40648535 cttaaagagctttatttgaactttgttttaaaggagctttta 40648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 44065502 - 44065442
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||| | || |||||||    
T  44065502 attcaaagctttgtacaatattgtgccaaacaacttttaacttaaaaaaagctgtaaaact 44065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 49223163 - 49223222
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 71  Q
    ||||||||||||| ||||||||||||| |||||| | ||||||| ||||||| ||||||||    
T  49223163 aaattcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaaatagctttaaaa 49223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 49571314 - 49571357
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  49571314 cttaaagagctttattttaact---ttttaaagtagcttttagaccg 49571357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 12247728 - 12247685
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttaga 160  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  12247728 cttaaaggcctttattttaactttgttttaaagtaacttttaga 12247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 23910965 - 23910914
Alignment:
Q  22 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  23910965 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 23910914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 33932934 - 33932985
Alignment:
Q  17 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||  ||||||||||||||| ||||||| | |||||||||||||    
T  33932934 aaagttttgtatgatattttgccaaacaacttttaatttaaaaataacttta 33932985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 34078401 - 34078440
Alignment:
Q  124 agctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  34078401 agctttattttaacttcattttaaagtagcttttagaccg 34078440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 28568717 - 28568671
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  28568717 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 28568671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 36680039 - 36680085
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  36680039 cttaaagacctttattttaactttgttttgaattaacttttagaccg 36680085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 43808845 - 43808879
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagta 151  Q
    ||||||||| |||||||||||||||||||||||||    
T  43808845 cttaaagagttttattttaactttgttttaaagta 43808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 17670106 - 17670143
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17670106 ctttattttaactttgttttgaagtaacttttagaccg 17670143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 18091391 - 18091436
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||  |||||||||||||||||||| || |||||||||||||    
T  18091391 cttaaaggcctttattttaactttgttttgaactagcttttagacc 18091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1476 - 1632
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  1476 aaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 1572  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  1573 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7364 - 7204
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||             ||| ||||||||||    
T  7364 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaactaaaaaaaaaaaaaaaaaaaaccaaaca 7265  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7264 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 70; Significance: 5e-31; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 90533 - 90374
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |            |||||||||||||||    
T  90533 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa-ttaaaaaaataaataaagaaaccaaaca 90435  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||        ||||||   |||||||||||||||||||||||||||||||||||||    
T  90434 gctttagcctttttt--ttaaaggattttattttaactttgttttaaagtagcttttagaccg 90374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 110487 - 110442
Alignment:
Q  118 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  110487 ttaaagaactttattttaactttgttttaaagtagcttttaaaccg 110442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 110599 - 110532
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||| || ||| |||||||||  ||||||||||||| ||||| ||||||||| |||||||||||||    
T  110599 aaaaaaaaaaaaaatcaaagtttcttacaatattttgctaaacaacttttaacttaaaaataacttta 110532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15333 - 15174
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  15333 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 15237  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||           ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15236 gctttaattttttttttttaaaaagctttattttaactttgttttaaagtagcttttagaccg 15174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7646 - 7574
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  7646 aaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 7527 - 7493
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttaga 160  Q
    ||||||||||||||||||||||| |||||||||||    
T  7527 ctttattttaactttgttttaaaatagcttttaga 7493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6375 - 6308
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6375 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 132659 - 132817
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 100  Q
    |||| |||||||||| |||||||  ||||||||||||||||||| ||||||| | ||||||||||||| ||||             ||| ||||||||||    
T  132659 aaaagataataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaactaaaaaaaaataaaaaataaaccaaaca 132757  T
Q  101 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 162  Q
    ||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  132758 gctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 132817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 229195 - 229241
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  229195 cttaaaggactttattttaactttgttttaaaggagcttttagaccg 229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 228 - 182
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  228 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 1072 - 1127
Alignment:
Q  18 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  1072 aagttttgaaaaatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 1174 - 1247
Alignment:
Q  126 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatatgttt 199  Q
    |||||||||||||||||||||||  |||||||||||||       ||||| |||||||||||||||||| ||||    
T  1174 ctttattttaactttgttttaaaagagcttttagaccgtaaaaaagtctggtcaaacggtacctaaataagttt 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 138101 - 138034
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 68  Q
    |||||| || ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  138101 aaaaaaaaaaaaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataacttta 138034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 137990 - 137944
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  137990 cttaaagagctttattttaactttgttttaaagtaatttttagaccg 137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1822 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 356 - 402
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  356 cttaaagagttttattttaactttgttttaaagtaacttttagaccg 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  13 attcaaagttttgtacaatattttgccaaacagcttttaactcaa-aaataactttaaaact 73  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| || ||||||||||||||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 31633 - 31572
Alignment:
Q  11 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  31633 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 156640 - 156569
Alignment:
Q  1 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 73  Q
    |||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||| ||| ||||||||||    
T  156640 aaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaacatatctttaaaact 156569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 99491 - 99537
Alignment:
Q  117 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 163  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  99491 cttaaagacctttattttaactttgttttgaaataacttttagaccg 99537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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