View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11751_low_26 (Length: 259)
Name: NF11751_low_26
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11751_low_26 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 40531136 - 40531382
Alignment:
| Q |
14 |
tattccacaaaacatttttacaccttttaactttgttttttgtaggtctaagttagcaaacctctgcatatattatatattcaacaacgtatgaaataca |
113 |
Q |
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| T |
40531136 |
tattccacaaaactttttaacaccttttaactttgttttttactggtgtaagttagcaaatctctatatatattatatattcaacaacttatgaaataca |
40531235 |
T |
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| Q |
114 |
gtcaatttcattgtgttcgaatcagagagaaagaagaaatatcaaattaaaaactatataagatatgctcgaaattatacgtctgatatcaagtacctat |
213 |
Q |
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| T |
40531236 |
gtcaatttcattgtgttcgaatcagagagaaagaacaaatatcaaattaaaaactatataaaatatgctcgaaattatacgtctgatatcaagttcctat |
40531335 |
T |
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| Q |
214 |
ataaaattgcatc-tgttcttgcaacggatcaatcagcatatccact |
259 |
Q |
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| T |
40531336 |
ataaaattgcatcatgttcttgcaacggatcaaacagcaaatccact |
40531382 |
T |
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