View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11751_low_7 (Length: 550)

Name: NF11751_low_7
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11751_low_7
NF11751_low_7
[»] chr2 (17 HSPs)
chr2 (143-519)||(18908505-18908881)
chr2 (152-528)||(18913262-18913638)
chr2 (143-519)||(18920467-18920837)
chr2 (449-519)||(25377072-25377142)
chr2 (449-519)||(14514898-14514968)
chr2 (429-510)||(22051731-22051812)
chr2 (449-525)||(554468-554544)
chr2 (55-143)||(18912334-18912422)
chr2 (13-48)||(18908311-18908346)
chr2 (470-517)||(20712556-20712603)
chr2 (31-123)||(18919673-18919764)
chr2 (463-518)||(20975557-20975612)
chr2 (447-517)||(20980604-20980674)
chr2 (465-518)||(10205462-10205515)
chr2 (177-217)||(20712293-20712333)
chr2 (441-517)||(20967700-20967776)
chr2 (177-217)||(21021047-21021087)
[»] chr7 (65 HSPs)
chr7 (155-519)||(19779600-19779961)
chr7 (144-519)||(19357908-19358280)
chr7 (141-519)||(19887408-19887783)
chr7 (330-517)||(19722018-19722211)
chr7 (429-519)||(19351051-19351141)
chr7 (437-518)||(19344565-19344646)
chr7 (436-516)||(660836-660916)
chr7 (155-217)||(19350810-19350872)
chr7 (436-517)||(29454092-29454173)
chr7 (443-519)||(22028626-22028702)
chr7 (436-518)||(14076677-14076759)
chr7 (436-518)||(14386705-14386787)
chr7 (449-518)||(22063641-22063710)
chr7 (169-218)||(22524932-22524981)
chr7 (35-146)||(14739006-14739117)
chr7 (449-511)||(19604465-19604527)
chr7 (170-220)||(21218467-21218517)
chr7 (436-517)||(12819905-12819986)
chr7 (449-518)||(22100492-22100561)
chr7 (436-517)||(36263053-36263134)
chr7 (436-500)||(6864796-6864860)
chr7 (426-518)||(22080867-22080959)
chr7 (437-517)||(29921983-29922063)
chr7 (437-517)||(36260253-36260333)
chr7 (463-514)||(16839397-16839448)
chr7 (463-514)||(16846480-16846531)
chr7 (436-518)||(19325974-19326056)
chr7 (14-99)||(19781208-19781296)
chr7 (436-518)||(20058046-20058128)
chr7 (463-517)||(26256775-26256829)
chr7 (429-511)||(29874517-29874599)
chr7 (460-517)||(20414882-20414939)
chr7 (454-519)||(22021390-22021455)
chr7 (449-518)||(22070110-22070179)
chr7 (436-517)||(29430990-29431071)
chr7 (436-517)||(29859454-29859535)
chr7 (440-517)||(29899374-29899451)
chr7 (176-228)||(19645454-19645506)
chr7 (436-488)||(24002228-24002280)
chr7 (470-517)||(9807824-9807871)
chr7 (438-517)||(35205915-35205994)
chr7 (449-511)||(18514789-18514851)
chr7 (449-519)||(18952907-18952977)
chr7 (449-519)||(18982954-18983024)
chr7 (449-519)||(18997600-18997670)
chr7 (330-396)||(19350976-19351042)
chr7 (451-509)||(19597659-19597717)
chr7 (451-517)||(21218712-21218778)
chr7 (465-515)||(24031257-24031307)
chr7 (436-525)||(15571884-15571973)
chr7 (465-518)||(20338923-20338976)
chr7 (443-508)||(22039955-22040020)
chr7 (177-218)||(22534885-22534926)
chr7 (436-485)||(24010415-24010464)
chr7 (463-516)||(26217968-26218021)
chr7 (260-297)||(29453958-29453995)
chr7 (436-493)||(36255390-36255447)
chr7 (174-218)||(7310970-7311014)
chr7 (163-215)||(15571632-15571684)
chr7 (449-517)||(19637219-19637287)
chr7 (463-519)||(22037084-22037140)
chr7 (465-517)||(29106814-29106866)
chr7 (437-517)||(29445646-29445726)
chr7 (429-517)||(29867236-29867324)
chr7 (260-292)||(29895645-29895677)
[»] scaffold0464 (1 HSPs)
scaffold0464 (141-525)||(8053-8434)
[»] chr3 (6 HSPs)
chr3 (329-525)||(12734672-12734868)
chr3 (155-519)||(32578573-32578937)
chr3 (141-218)||(12734505-12734582)
chr3 (449-525)||(25901281-25901357)
chr3 (449-525)||(25915299-25915375)
chr3 (436-511)||(3625740-3625815)
[»] chr6 (15 HSPs)
chr6 (451-519)||(14749395-14749463)
chr6 (141-299)||(14749585-14749746)
chr6 (449-519)||(6921352-6921422)
chr6 (436-517)||(20770650-20770731)
chr6 (453-517)||(24950150-24950214)
chr6 (449-519)||(6935220-6935290)
chr6 (446-519)||(6954518-6954591)
chr6 (466-515)||(33576172-33576221)
chr6 (155-215)||(6921076-6921136)
chr6 (436-500)||(17369681-17369745)
chr6 (449-500)||(6947882-6947933)
chr6 (447-518)||(24254426-24254497)
chr6 (174-215)||(6942712-6942753)
chr6 (466-515)||(5979029-5979078)
chr6 (155-215)||(6934959-6935019)
[»] chr4 (18 HSPs)
chr4 (438-518)||(53774839-53774919)
chr4 (436-518)||(11970971-11971053)
chr4 (436-517)||(3565744-3565825)
chr4 (437-518)||(35767017-35767098)
chr4 (436-518)||(53790552-53790634)
chr4 (436-517)||(3557726-3557807)
chr4 (429-518)||(11981665-11981754)
chr4 (439-500)||(6113096-6113157)
chr4 (436-517)||(19361442-19361523)
chr4 (155-218)||(53775098-53775161)
chr4 (172-218)||(2911332-2911378)
chr4 (436-494)||(19359160-19359218)
chr4 (436-493)||(3560947-3561004)
chr4 (269-298)||(3565936-3565965)
chr4 (449-518)||(8443456-8443525)
chr4 (463-519)||(837774-837830)
chr4 (463-511)||(1686301-1686349)
chr4 (449-525)||(10553548-10553624)
[»] chr5 (11 HSPs)
chr5 (439-518)||(29597544-29597623)
chr5 (439-518)||(29647675-29647754)
chr5 (35-123)||(17587094-17587182)
chr5 (454-519)||(28763912-28763977)
chr5 (439-518)||(29642358-29642437)
chr5 (466-515)||(23086784-23086833)
chr5 (449-517)||(24330901-24330969)
chr5 (436-511)||(18964819-18964894)
chr5 (451-517)||(42298111-42298177)
chr5 (172-218)||(42298374-42298420)
chr5 (170-223)||(24330613-24330666)
[»] scaffold0867 (1 HSPs)
scaffold0867 (449-518)||(4671-4740)
[»] chr1 (7 HSPs)
chr1 (436-517)||(39379050-39379131)
chr1 (449-517)||(21855385-21855453)
chr1 (449-514)||(4014967-4015032)
chr1 (449-518)||(50645487-50645556)
chr1 (449-517)||(4570927-4570995)
chr1 (170-223)||(21855097-21855150)
chr1 (32-68)||(31442231-31442267)
[»] scaffold0128 (2 HSPs)
scaffold0128 (169-220)||(25879-25930)
scaffold0128 (172-218)||(4400-4446)
[»] scaffold0097 (2 HSPs)
scaffold0097 (470-517)||(16395-16442)
scaffold0097 (177-217)||(16132-16172)
[»] chr8 (3 HSPs)
chr8 (177-218)||(27618724-27618765)
chr8 (436-518)||(27618490-27618572)
chr8 (463-515)||(29390288-29390340)
[»] scaffold0064 (1 HSPs)
scaffold0064 (451-516)||(24206-24271)
[»] scaffold0649 (1 HSPs)
scaffold0649 (441-517)||(5438-5514)


Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-178; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 143 - 519
Target Start/End: Original strand, 18908505 - 18908881
Alignment:
Q  143 aaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttc 242  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18908505 aaaatcaattagaacaattaaatcatcgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttg 18908604  T
Q  243 tttgctagttgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttgcc 342  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  18908605 tttgctagttgcaatttgttcaactttattatctctccaattataaagaattgcatgtcggcggtgatagccatgaatgaggcctcgttgattgcttgcc 18908704  T
Q  343 attaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatgaagat 442  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |  ||||||||| | |||||||||||||| ||||||||||||||    
T  18908705 attaccagtgtgttgctactctcagaaacacataatggtaacaagaacaattgagcataatatgcaaggctatcaccaatgccataatcaatatgaagat 18908804  T
Q  443 tttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18908805 tttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 152 - 528
Target Start/End: Original strand, 18913262 - 18913638
Alignment:
Q  152 tagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttctttgctagt 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||  |||| |  ||| ||||    
T  18913262 tagaacaattaaatcattgaagagaaacttactttcaagaggttgataccaagctttcaacataattcttggtatgaaaccacaatatgttattgttagt 18913361  T
Q  252 tgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttgccattaccagt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  18913362 tgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtgatagccatgaatgaggcctcgttgattgcttgccattaccagt 18913461  T
Q  352 gtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatgaagattttgaaaac 451  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| |  ||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  18913462 gtgttgctactctcagaaacacataatggtaacaagaacaattgagcataatatgcaaggctatcaccaatgccataatcaatatgaagattttgaaaac 18913561  T
Q  452 taattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattcccctg 528  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18913562 taattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggttcccctg 18913638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 143 - 519
Target Start/End: Original strand, 18920467 - 18920837
Alignment:
Q  143 aaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttc 242  Q
    ||||| |||||||| || |||||||||||||| |||||||| |       | ||||| |||||||||||||||||  || |||| ||||||   |||||     
T  18920467 aaaattaattagaataactaaatcattgaagataaacttacat-------ggtgaaatcaagctttcaacataattctttgtatgaaaccacattatttg 18920559  T
Q  243 tttgctagttgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttgcc 342  Q
     |||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18920560 attgtaagttgcaatttgctcaactttattttctctccaattatagagaattgcatgttggcggttatagccatgaatgaggcctcgttgattgcttgcc 18920659  T
Q  343 attaccagtgtgttgctac-tctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatgaaga 441  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||||||||||| |  ||||||||| | ||||| |||||||| |||||||||||||    
T  18920660 attatcagtgtgttgctacgtctcagaaacacataatggtaacaagaacaattgagcataatatgcaaggctatcactaatgccataatcaatatgaaga 18920759  T
Q  442 ttttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18920760 ttttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18920837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 25377142 - 25377072
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| |  |||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  25377142 aactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaatgg 25377072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 519
Target Start/End: Complemental strand, 14514968 - 14514898
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||   ||| ||||||||||||| ||||    
T  14514968 aactaattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaagatgg 14514898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 510
Target Start/End: Original strand, 22051731 - 22051812
Alignment:
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatata 510  Q
    |||||| |||||||| ||| ||||||||||||  |||||||||||| | |||||||||||| ||| || |||| ||||||||    
T  22051731 atcaatttgaagattctgataactaattttgaaaaattgagtccaatattcttgaactccacatttcaacatcctccatata 22051812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 525
Target Start/End: Complemental strand, 554544 - 554468
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||||||| || ||||||||||||||||||| ||||||| |||| ||||| | |||||||| || |||| |||||    
T  554544 aactaattttaagtaattgagtccaagactctttaactccatattctatcatttgccatataataagatgggttccc 554468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 18912334 - 18912422
Alignment:
Q  55 ttcctttgtgaaaagagtaatagagaaattagcttcaaccttgatgaatataagccagtaccacaagtggcacgacgattatgatatta 143  Q
    |||||| ||||||| | |||||||||||||||||||||||| ||||  || |||||| | ||||| ||| ||| ||| |||||||||||    
T  18912334 ttccttcgtgaaaataataatagagaaattagcttcaacctcgatgcctaaaagccaatgccacaggtgacaccacggttatgatatta 18912422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 18908311 - 18908346
Alignment:
Q  13 cacagataaaatcaatagataattctcaaaagtgca 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  18908311 cacagataaaatcaatagataattctcaaaagtgca 18908346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 20712556 - 20712603
Alignment:
Q  470 tccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  20712556 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 20712603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 18919673 - 18919764
Alignment:
Q  31 ataattctcaaaagtgcagctacattcctttgtgaaaagagtaatagagaaattagcttcaaccttgatgaatataagccagtaccacaagtg 123  Q
    |||||| ||||||||||||  |  ||||||||| | || | |||||||||| |||||||||||||||| |  || ||||||||||||||||||    
T  18919673 ataattgtcaaaagtgcagtcatgttcctttgtaagaaaa-taatagagaagttagcttcaaccttgacgcctaaaagccagtaccacaagtg 18919764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 518
Target Start/End: Complemental strand, 20975612 - 20975557
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||| ||||||| |||| ||||||||||||| |||| | |||||||||||||||    
T  20975612 aattgaatccaagaatcttcaactccaaattccctcatttgccatataacaaaatg 20975557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 20980674 - 20980604
Alignment:
Q  447 aaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||| ||| ||| ||||| | |||||||||||||| ||||| ||||||  |||| ||||||||||||||||    
T  20980674 aaaattaaatttaaggaacttagtccaagactcttcaactctaaattctgtcattttccatataacaaaat 20980604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 518
Target Start/End: Original strand, 10205462 - 10205515
Alignment:
Q  465 ttgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||||||||| ||| ||| | ||  ||||||||||||||||||||||    
T  10205462 ttgagtccaagactcttcaacaccatactcagtcatcttccatataacaaaatg 10205515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 20712293 - 20712333
Alignment:
Q  177 aacttactttcaagaggttgaaaccaagctttcaacataat 217  Q
    ||||||||||||| | ||||||||||||||||| |||||||    
T  20712293 aacttactttcaacaagttgaaaccaagctttcgacataat 20712333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 20967776 - 20967700
Alignment:
Q  441 attttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||| | |||| ||||||||| | |||||||||||||| | ||| ||||| | |||| | ||||||||||||||    
T  20967776 attttgacagctaaatttgaggaacttagtccaagactcttcagctctaaatttcgtcatttgccatataacaaaat 20967700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 21021047 - 21021087
Alignment:
Q  177 aacttactttcaagaggttgaaaccaagctttcaacataat 217  Q
    ||||||||||||| | ||||||||||| |||||||||||||    
T  21021047 aacttactttcaacaagttgaaaccaaactttcaacataat 21021087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 155 - 519
Target Start/End: Complemental strand, 19779961 - 19779600
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttctttgcta---gt 251  Q
    |||| ||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||||| ||||||  ||||||| |||  |   |     
T  19779961 aacagttaaatcattgaagagaaacttactctcaaaaggttgaaactaagctttcaacataatccttggtatgaaaccacaatatttcattgtcaacaga 19779862  T
Q  252 tgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttgccattaccagt 351  Q
    || ||||||||| ||  | ||||||||||||||||||||||||||||| | |   ||||| ||||    | |||||  |||||||||||||||||  |||    
T  19779861 tgtaatttgctctaccgttttatctctccaattatagagaattgcatggttg---tcataaccatc---gtggccttcttgattgcttgccattataagt 19779768  T
Q  352 gtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatgaagattttgaaaac 451  Q
    ||||||  |||||||||||  ||||||||  ||||  ||||||||||||||||  | ||  |||||| |||||||| |||||| ||||| |  |||||||    
T  19779767 gtgttgtcactctcagaaaggtacaatggatacaaatacaattgagaaccataatccagtgaatcactaatgccataatcaatttgaaggtcctgaaaac 19779668  T
Q  452 taattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||||||  ||||| ||||||||||    
T  19779667 taattttgaggaattgagtccaagagtcttgaactccgtactccatcatcaaccataaaacaaaatgg 19779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 144 - 519
Target Start/End: Complemental strand, 19358280 - 19357908
Alignment:
Q  144 aaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttct 243  Q
    |||| |||| ||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||  ||||||      
T  19358280 aaataaatttgaacaattaaatcatagaagagaaacttactttcaagaggatgaaactaagctttcaacataatctttggtataaaaccaccatatttta 19358181  T
Q  244 ttgct---agttgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttg 340  Q
    ||| |   || || | | ||||  ||| | ||||||||||||||||||||||||||||||||   |||| |  ||||      ||||  ||| |||| ||    
T  19358180 ttgttgacagatgtagtatgctttactcttttatctctccaattatagagaattgcatgttgttcgtcaaaatcata------gccttcttgcttgcatg 19358087  T
Q  341 ccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatgaag 440  Q
    |||||| |||||||| | |||||||||||||| |||||||||| | ||||| |||     || ||     |||||||| | |||||| |||||| |||||    
T  19358086 ccattatcagtgtgtcgttactctcagaaacacacaatggtaataggaacatttgctcctcaaatctctcccaatcactactgccataatcaatttgaag 19357987  T
Q  441 attttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19357986 atcctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccataaaacgaaatgg 19357908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 141 - 519
Target Start/End: Original strand, 19887408 - 19887783
Alignment:
Q  141 ttaaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatt 240  Q
    ||||||| ||||  |||||||||||||||||| | ||||||||| |||| || ||||||| ||||||||||||||||| ||||||| ||||||  |||||    
T  19887408 ttaaaattaattcaaacaattaaatcattgaatagaaacttactctcaaaagattgaaactaagctttcaacataatccttggtatgaaaccacaatatt 19887507  T
Q  241 tctttgcta---gttgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgc 337  Q
    || |||  |   | || ||||||||| ||  | ||||||||||| ||||||| ||||||||| | |   ||||| ||||    |  |||| |||||||||    
T  19887508 tcattgtcaacagatgtaatttgctctaccgttttatctctccagttatagataattgcatggttg---tcataaccatc---gtagccttgttgattgc 19887601  T
Q  338 ttgccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatg 437  Q
    |||||||||  |||||||||  |||||||||||  || |||||  ||||  ||||||||||||||||  | ||  |||||| |||||||| |||||| ||    
T  19887602 ttgccattataagtgtgttgtcactctcagaaaggtaaaatggatacaaatacaattgagaaccatagtccagtgaatcactaatgccataatcaatttg 19887701  T
Q  438 aagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||| |  |||||||||||||||||||||||||||||||| |||||||||||  | |||||||||  ||||| ||||||||||    
T  19887702 aaggtcctgaaaactaattttgaggaattgagtccaagagtcttgaactccgtactccatcatcaaccataaaacaaaatgg 19887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 330 - 517
Target Start/End: Complemental strand, 19722211 - 19722018
Alignment:
Q  330 ttgattgcttgccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatga 429  Q
    |||||||||||||||||  ||||| || |||||||| |||||  ||||||| |||| ||||||||||||| ||||||  ||   ||||| ||||| || |    
T  19722211 ttgattgcttgccattattagtgtattcctactctcggaaacgcacaatgggaacaggaacaattgagaatcatatggtagaagatcactaatgcgataa 19722112  T
Q  430 t------caatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |      |||| | | |||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19722111 taatcatcaatttcatgattctaaaaactgattttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccataaaacaaaat 19722018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 429 - 519
Target Start/End: Original strand, 19351051 - 19351141
Alignment:
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||| |||||||  ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||| ||||||||||    
T  19351051 atcaatgtgaagatcctgaaaactaattttgaggaatggagtccaagactcctcaactccaaattccatcatctgccataaaacaaaatgg 19351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 19344565 - 19344646
Alignment:
Q  437 gaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||| |||||||||||||| || |||||||||||||| | || |||||||||||||||||||| |||||||||||||||    
T  19344565 gaagattctgaaaactaattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatataacaaaatg 19344646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 516
Target Start/End: Original strand, 660836 - 660916
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaa 516  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||    
T  660836 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 660916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 19350810 - 19350872
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataat 217  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19350810 aacaattaaatcattaaagagaaacttactttcaagaggttgaaactaagctttcaacataat 19350872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 29454092 - 29454173
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||| |||| |||||||||| | ||||||||||||||| |||| ||||||||||| |||||||  ||||||||||||||    
T  29454092 tgaagatcttgataactaattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatataacaaaat 29454173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 22028702 - 22028626
Alignment:
Q  443 tttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||||||||| || || ||||||||||||||||||| ||||||| | ||| |||| ||||||||||||||||||    
T  22028702 tttgaaaactaatcttaagtaattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatgg 22028626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 518
Target Start/End: Complemental strand, 14076759 - 14076677
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||| ||| |||||||||| || |||||||||||||| |||| ||||||||||||| |||| | ||||||||| |||||    
T  14076759 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 518
Target Start/End: Complemental strand, 14386787 - 14386705
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||| ||| |||||||||| || |||||||||||||| |||| ||||||||||||| |||| | ||||||||| |||||    
T  14386787 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14386705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 22063710 - 22063641
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||||  || ||||||||||||||||||| |||||||||| |||| | |||||||||||||||    
T  22063710 aactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaatg 22063641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 22524932 - 22524981
Alignment:
Q  169 tgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  22524932 tgaagaagaacttactttcaagaagttgaaaccaagctttcaacataatc 22524981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 14739117 - 14739006
Alignment:
Q  35 ttctcaaaagtgcagctacattcctttgtgaaaagagtaatagagaaattagcttcaaccttgatgaatataagccagtaccacaagtggcacgacgatt 134  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| |||||||||||| || ||| |||  || |||| ||||||| ||||| ||| |   ||    
T  14739117 ttctcaaaagtgcagcaacattcttttttgaaaagaataataaagaaattagcttgaaactttatgcctaaaagctagtaccataagtgacacaattgtt 14739018  T
Q  135 atgatattaaaa 146  Q
    ||||||||||||    
T  14739017 atgatattaaaa 14739006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 19604465 - 19604527
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    |||||||||| |||||||||||||| || |||| ||||||||||||| |||||| ||||||||    
T  19604465 aactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataa 19604527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 21218467 - 21218517
Alignment:
Q  170 gaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcat 220  Q
    |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  21218467 gaagaagaacttactttcaagaagttgaaaccaagctttcgacataatcat 21218517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 12819905 - 12819986
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||| ||| |||| ||||| |||||||||||||| || | || ||||||||||||| |||||| ||||| ||||||||    
T  12819905 tgaagattctgacaactgattttaaggaattgagtccaggattgttcaactccaaattccgtcatctgccatacaacaaaat 12819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 22100561 - 22100492
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||||  || |||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  22100561 aactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatg 22100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 36263134 - 36263053
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||| | | |||| ||| | || ||||||||||||||||| ||||||||||||   ||||||||||||||||||||    
T  36263134 tgaagattttcatagctaactttaatgagttgagtccaagactcttcaactccaaattcttccatcttccatataacaaaat 36263053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 500
Target Start/End: Original strand, 6864796 - 6864860
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcat 500  Q
    |||||||| ||| ||||| |||| ||||| |||||||||||||||| ||||||||||||| ||||    
T  6864796 tgaagattatgataactagttttaaggaactgagtccaagactcttcaactccaaattccttcat 6864860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 518
Target Start/End: Complemental strand, 22080959 - 22080867
Alignment:
Q  426 atgatcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||| || || ||||| ||| ||||||||||||  ||  ||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  22080959 atgatctatttggagattctgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatg 22080867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 517
Target Start/End: Original strand, 29921983 - 29922063
Alignment:
Q  437 gaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||||||| |||||||| | |||||||||| |||||| |||| | | ||||||| | |||||| ||||||||||||||    
T  29921983 gaagattttgataactaattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatataacaaaat 29922063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 517
Target Start/End: Complemental strand, 36260333 - 36260253
Alignment:
Q  437 gaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||||||| | |||||||| |  | |||| |||||||||||| ||||||||||||   ||||||||||||||||||||    
T  36260333 gaagattttgatagctaattttaataagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaat 36260253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 16839397 - 16839448
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaa 514  Q
    ||||||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  16839397 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaa 16839448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 16846480 - 16846531
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaa 514  Q
    ||||||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  16846480 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaa 16846531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 518
Target Start/End: Original strand, 19325974 - 19326056
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||| ||| |||||||| ||||||| ||||||||||||||| | ||  ||||||||||||  ||| | |||||||||||||||    
T  19325974 tgaacattctgaaaactgattttgatgaattgagtccaagattgttctactccaaattccgacatatgccatataacaaaatg 19326056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 19781296 - 19781208
Alignment:
Q  14 acagataaaatcaatagataattctcaaaagtgcagctacattcctttgtg---aaaagagtaatagagaaattagcttcaaccttgat 99  Q
    ||||| ||||| |||| |||||||||||||||| ||| |||||||||| ||   |||| | ||||| ||||||||||||||||| ||||    
T  19781296 acagaaaaaatgaatatataattctcaaaagtgaagccacattcctttctgaaaaaaataataataaagaaattagcttcaaccgtgat 19781208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 518
Target Start/End: Original strand, 20058046 - 20058128
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||| | |||||||||| || ||||||  ||||||||||| |||||  ||||||  ||| |||||||||||||||||    
T  20058046 tgaagattttcataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaatg 20058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 26256829 - 26256775
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||||||||||||||||||||||| | ||| |||||| ||||| ||||||||    
T  26256829 aattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaat 26256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 511
Target Start/End: Complemental strand, 29874599 - 29874517
Alignment:
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    |||||| |||||||||||| |||||||||| || ||| |||||||||| |||| ||| ||||||| | |||| | ||||||||    
T  29874599 atcaatttgaagattttgataactaattttaagtaatggagtccaagaatcttcaaccccaaatttcttcatttgccatataa 29874517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 20414939 - 20414882
Alignment:
Q  460 aggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||||||||||||  | | ||||||||| ||||||||||||||||| |||||    
T  20414939 aggaattgagtccaagacttgtcatctccaaatttcatcatcttccatataataaaat 20414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 22021455 - 22021390
Alignment:
Q  454 attttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||| || |||||||||||||| |||| ||||||| | |||||||||| ||||||||| ||||||    
T  22021455 attttaagtaattgagtccaagattcttcaactccataatccatcatctgccatataaccaaatgg 22021390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 22070179 - 22070110
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||||  ||  ||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  22070179 aactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatg 22070110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 29430990 - 29431071
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||  ||| |||||||||| |||||||| |||||||| |||| | | ||||||| |||||||  ||||||||||||||    
T  29430990 tgaagatcctgataactaattttaaggaattgggtccaagaatctttagccccaaatttcatcatccgccatataacaaaat 29431071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 29859535 - 29859454
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||| ||| |||||||||| || ||| | |||||||| |||| ||||||||||| | |||||| ||||||||| ||||    
T  29859535 tgaagattgtgataactaattttaagaaatggggtccaagaatcttcaactccaaatttcttcatctcccatataacgaaat 29859454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 440 - 517
Target Start/End: Complemental strand, 29899451 - 29899374
Alignment:
Q  440 gattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||  |||||||||| |  ||||||||||| ||||||| ||| ||||||| | |||||| ||||||||||||||    
T  29899451 gattttggcaactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaaat 29899374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 19645454 - 19645506
Alignment:
Q  176 aaacttactttcaagaggttgaaaccaagctttcaacataatcattggtatta 228  Q
    |||||||||||||| | ||||||||||| |||||||||||||| |||| ||||    
T  19645454 aaacttactttcaacaagttgaaaccaaactttcaacataatccttggaatta 19645506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 24002280 - 24002228
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactcc 488  Q
    |||||||| ||| ||||||| || || ||||||||||||||||||||||||||    
T  24002280 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaactcc 24002228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 517
Target Start/End: Complemental strand, 9807871 - 9807824
Alignment:
Q  470 tccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||    
T  9807871 tccaagactcttcaactccaaattccttcatctgccatataacgaaat 9807824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 517
Target Start/End: Original strand, 35205915 - 35205994
Alignment:
Q  438 aagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||| ||| | |||| ||| |||||||||||||||||||  | |  |||||||||  |||||||||||||||||||||    
T  35205915 aagattgtgatagctaaatttaaggaattgagtccaagacttgtcatttccaaattctgtcatcttccatataacaaaat 35205994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 18514789 - 18514851
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||   ||| ||||||||||    
T  18514789 aactaattttaaggaattgagtccaagagttttcaactccaaattcgtccattttccatataa 18514851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 18952907 - 18952977
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||| |||||||| ||||  | ||||||||||||| |||||| |||||| | |||||||    
T  18952907 aactaattttaaggaactgagtccatgacttgtcaactccaaattccttcatctgccatatgataaaatgg 18952977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 18982954 - 18983024
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||| |||||||| ||||  | ||||||||||||| |||||| |||||| | |||||||    
T  18982954 aactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatgg 18983024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 18997600 - 18997670
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||| |||||||| ||||  | ||||||||||||| |||||| |||||| | |||||||    
T  18997600 aactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatgg 18997670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 19350976 - 19351042
Alignment:
Q  330 ttgattgcttgccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattga 396  Q
    |||||||||| ||||||  | ||||| |||| ||| ||||||| |||||||||||| ||||||||||    
T  19350976 ttgattgcttaccattataattgtgtcgctaatcttagaaacacacaatggtaacacgaacaattga 19351042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 509
Target Start/End: Original strand, 19597659 - 19597717
Alignment:
Q  451 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatat 509  Q
    ||||||||||| || |||||||| ||||||| |||| |||||||| |||||| ||||||    
T  19597659 ctaattttgagaaactgagtccatgactcttcaacttcaaattccttcatctgccatat 19597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 21218712 - 21218778
Alignment:
Q  451 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||| |||||||||||||||||||||||  | | ||||||||||| |||| | ||||||||| ||||    
T  21218712 ctaaatttgaggaattgagtccaagacttatcatctccaaattccgtcatttgccatataaccaaat 21218778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 24031307 - 24031257
Alignment:
Q  465 ttgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 515  Q
    ||||||||||||||||||||||||||| ||  |||| |||||||| |||||    
T  24031307 ttgagtccaagactcttgaactccaaactcattcattttccatatgacaaa 24031257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 525
Target Start/End: Original strand, 15571884 - 15571973
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||||||  | ||||||||||  ||||||||  ||||||||||| ||||||||| ||| |||| | ||| || ||||||||| |||||    
T  15571884 tgaagatttgaataactaattttatggaattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttccc 15571973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 518
Target Start/End: Complemental strand, 20338976 - 20338923
Alignment:
Q  465 ttgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||||| |||| |||||| |||||| |||| |||||||| ||||||||    
T  20338976 ttgagtccaagaatcttcaactcctaattccttcattttccatattacaaaatg 20338923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 22040020 - 22039955
Alignment:
Q  443 tttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccata 508  Q
    |||||||| |||| || || ||||||||||||||||||| ||||||| | ||  ||||||||||||    
T  22040020 tttgaaaattaatcttaagtaattgagtccaagactcttcaactccataatctgtcatcttccata 22039955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 22534926 - 22534885
Alignment:
Q  177 aacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    ||||||||||||||| | ||||||||||||||| ||||||||    
T  22534926 aacttactttcaagaaggtgaaaccaagctttcgacataatc 22534885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 24010464 - 24010415
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaac 485  Q
    |||||||| ||| ||||||| || || |||||||||||||||||||||||    
T  24010464 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaac 24010415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 26218021 - 26217968
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaa 516  Q
    ||||||| ||||||||||||||||||| | ||| |||||| ||||| |||||||    
T  26218021 aattgagaccaagactcttgaactccatactccttcatctgccataaaacaaaa 26217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 29453958 - 29453995
Alignment:
Q  260 gctcaactttattatctctccaattatagagaattgca 297  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  29453958 gctctactttattatctctccagttatagagaattgca 29453995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 493
Target Start/End: Complemental strand, 36255447 - 36255390
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaatt 493  Q
    |||||||||||| | |||| ||| | || ||||||||||||||||| |||||||||||    
T  36255447 tgaagattttgatagctaactttaatgagttgagtccaagactcttcaactccaaatt 36255390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 7310970 - 7311014
Alignment:
Q  174 aaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    |||||||||||||||| ||||||||||||  ||||| ||||||||    
T  7310970 aaaaacttactttcaataggttgaaaccagactttcgacataatc 7311014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 15571632 - 15571684
Alignment:
Q  163 aatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacata 215  Q
    |||||| ||| ||||||||||||||| || || || |||||||||||||||||    
T  15571632 aatcatcgaacaaaaacttactttcaggaagtcgataccaagctttcaacata 15571684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 19637219 - 19637287
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||| ||||   || |||| ||||||||||||||||||||| |||| | |||||||| |||||    
T  19637219 aactaattttaaggagccgaatccacgactcttgaactccaaattccttcatttgccatataataaaat 19637287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 22037140 - 22037084
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||||||| || | | ||||| | |||||||||||||||||||| ||||||    
T  22037140 aattgagtccaagaatcatcatctccataatccatcatcttccatataaccaaatgg 22037084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 29106866 - 29106814
Alignment:
Q  465 ttgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||||||||||||| ||| ||||||| | |||||| ||||| ||||||||    
T  29106866 ttgagtccaagactcttcaaccccaaatttcttcatctgccatacaacaaaat 29106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 517
Target Start/End: Original strand, 29445646 - 29445726
Alignment:
Q  437 gaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||| | | | ||||| || |||||||||||||| |||| ||| || |||||| |||||| |||||||| |||||    
T  29445646 gaagattttgtagattgatttttagaaattgagtccaagagtcttcaacccctaattccttcatctgccatataagaaaat 29445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 517
Target Start/End: Complemental strand, 29867324 - 29867236
Alignment:
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||| |||||||| ||  |||||||| | ||||||||||||||||| |||| ||| || |||| | |||| | |||||||| |||||    
T  29867324 atcaatttgaagattatggtaactaattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatataataaaat 29867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 29895677 - 29895645
Alignment:
Q  260 gctcaactttattatctctccaattatagagaa 292  Q
    |||| ||||||||||||||||||||||||||||    
T  29895677 gctctactttattatctctccaattatagagaa 29895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 141 - 525
Target Start/End: Complemental strand, 8434 - 8053
Alignment:
Q  141 ttaaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatt 240  Q
    ||||||| ||||||||| ||||||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||||||  |||| | ||||||   ||||    
T  8434 ttaaaattaattagaactattaaattattaaagagaaacttactttcaagaggttgaaactaagctttcaaaataatccctggtttgaaaccacattatt 8335  T
Q  241 tctttgcta---gttgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgc 337  Q
     | |||  |   | |  ||||||||||||  | ||||||||||||||||||| |||||||||       ||||  |||||      |||| |||||||||    
T  8334 acattgtcaagagatttaatttgctcaacccttttatctctccaattatagataattgcatggcttttatcatcaccata------gccttgttgattgc 8241  T
Q  338 ttgccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatgatcaatatg 437  Q
    |||||||||  |||||||||  ||||||||| |  ||||| || |||||||||||||||||||||||  | ||  |||||| |||||||| |||||| ||    
T  8240 ttgccattataagtgtgttgtcactctcagagaggtacaacggaaacaagaacaattgagaaccatactctagtgaatcactaatgccataatcaatttg 8141  T
Q  438 aagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||  ||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||| |||||| |||||||||| |||||    
T  8140 aagatcctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccatcatcatccataaaacaaaatgggttccc 8053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 5e-45; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 329 - 525
Target Start/End: Original strand, 12734672 - 12734868
Alignment:
Q  329 gttgattgcttgccattaccagtgtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccatatgcaagccaatcaccaatgccatg 428  Q
    ||||||||||||||||||  |||||||||  |||||||||||  ||||| || |||||||||||||||||||||||| | ||  ||||||  |||||||     
T  12734672 gttgattgcttgccattataagtgtgttgtcactctcagaaaggtacaacggaaacaagaacaattgagaaccatattccagtaaatcactgatgccata 12734771  T
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||| |||||||  ||||||||||||||||| |||||| ||||||| ||||||||||| ||||||| |||| |||||| |||||||||| |||||    
T  12734772 atcaatttgaagatcctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccaacatcatccataaaacaaaatgggttccc 12734868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 155 - 519
Target Start/End: Original strand, 32578573 - 32578937
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatttctttgcta---gt 251  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||  ||||||||||||||| | ||||||| ||||||  ||||||| | |  |   |     
T  32578573 aacaattaaatcattgaagagaaacttactctcaaaaggttgaaaataagctttcaacataagccttggtatgaaaccacaatatttcatcgtcaacaga 32578672  T
Q  252 tgcaatttgctcaactttattatctctccaattatagagaattgcatgttggcggtcatagccataaatgaggcctcgttgattgcttgccattaccagt 351  Q
    || ||||||||||||  | |||| |||||||| ||||||||||||||| | |   | |  | ||||      |||| ||||||||||||||||||  |||    
T  32578673 tgtaatttgctcaacccttttatttctccaatcatagagaattgcatggttgtcatgaccgtcata------gccttgttgattgcttgccattataagt 32578766  T
Q  352 gtgttgctactctcagaaacatacaatggtaacaagaacaattgagaaccat---atgcaagccaatcaccaatgccatgatcaatatgaagattttgaa 448  Q
    |||  |  |||||| ||||  ||||||||  |||||||||||||||||||||   || | ||  |||||| |||||||| |||||| ||||| |  ||||    
T  32578767 gtgccgtcactctcggaaaggtacaatggatacaagaacaattgagaaccatcatattccagtgaatcactaatgccataatcaatttgaaggtcctgaa 32578866  T
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||| ||||||||||||||||||||||| ||||||||  | ||||||||| |||||| ||||||||||    
T  32578867 aactaatcttgaggaattgagtccaagactcgtgaactccgtactccatcatcatccataaaacaaaatgg 32578937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 12734505 - 12734582
Alignment:
Q  141 ttaaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  12734505 ttaaaattaattagaactattaaatcattgaagagaaacttactttcaagaggttgaaactaagctttcaaaataatc 12734582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 525
Target Start/End: Original strand, 25901281 - 25901357
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| |||||||||||||||||| |||||    
T  25901281 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttccc 25901357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 525
Target Start/End: Original strand, 25915299 - 25915375
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| |||||||||||||||||| |||||    
T  25915299 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttccc 25915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 511
Target Start/End: Complemental strand, 3625815 - 3625740
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    |||||||||||| |||||||||| || ||||||||||||||||||| ||| ||||||| | |||| | ||||||||    
T  3625815 tgaagattttgataactaattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatataa 3625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 6e-26; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 14749463 - 14749395
Alignment:
Q  451 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  14749463 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcctccataaaacaaaatgg 14749395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 14749746 - 14749585
Alignment:
Q  141 ttaaaatcaattagaacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattggtattaaaccatgatatt 240  Q
    ||||||| ||||  || ||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||| |||| ||||||| ||||||  |||||    
T  14749746 ttaaaattaattcaaaaaattaaatcattgaagagaaacttactttcaagagcttgaaattaagctttcaacaaaatccttggtataaaaccacaatatt 14749647  T
Q  241 tctttg---ctagttgcaatttgctcaactttattatctctccaattatagagaattgcatg 299  Q
    || |||   | || || |||||| |||||  | |||||| |||||||||||| |||||||||    
T  14749646 tcattgtcaccagatgtaatttgttcaacccttttatctatccaattatagataattgcatg 14749585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 6921352 - 6921422
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||| |||| | ||| ||||||||||||    
T  6921352 aactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatgg 6921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 20770731 - 20770650
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||| ||| |||||||||| ||||||||| |||| ||||||| || |||||||||| |||| | ||||||||||||||    
T  20770731 tgaagattatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaat 20770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 517
Target Start/End: Original strand, 24950150 - 24950214
Alignment:
Q  453 aattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||| ||||||||| |||||||||| | ||||||||| | |||||||||||||||||||||||    
T  24950150 aattttaaggaattgactccaagactcctcaactccaaacttcatcatcttccatataacaaaat 24950214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 519
Target Start/End: Original strand, 6935220 - 6935290
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||| |||| | ||| |||||| |||||    
T  6935220 aactaattttaaggaatttagtccaagattcttgaactccaaattccttcatttgccaaataacataatgg 6935290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 519
Target Start/End: Original strand, 6954518 - 6954591
Alignment:
Q  446 gaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    ||||||||||||| |  |||||||||||||| |||| ||||||||||||| |||| | ||| ||||||||||||    
T  6954518 gaaaactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatgg 6954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 33576221 - 33576172
Alignment:
Q  466 tgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 515  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  33576221 tgagtccaagactcttgaactccaaactccttcatcatccatataacaaa 33576172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 6921076 - 6921136
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacata 215  Q
    ||||| |||||||| ||| |||||||||||||||||| || || |||||||||||||||||    
T  6921076 aacaagtaaatcatcgaacaaaaacttactttcaagaagtcgataccaagctttcaacata 6921136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 17369745 - 17369681
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcat 500  Q
    |||||||| ||| |||||||||| || |||||||||||||| |||| ||||||||||||| ||||    
T  17369745 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcat 17369681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 6947882 - 6947933
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcat 500  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||| ||||    
T  6947882 aactaattttaaggaattgagtccaagattcttcaactccaaattccttcat 6947933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 518
Target Start/End: Original strand, 24254426 - 24254497
Alignment:
Q  447 aaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||| ||||||| ||||||||||||||| | ||  ||||||||||||  ||||| |||||||||||||||    
T  24254426 aaaactgattttgatgaattgagtccaagattgttcgactccaaattccgacatctgccatataacaaaatg 24254497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 6942712 - 6942753
Alignment:
Q  174 aaaaacttactttcaagaggttgaaaccaagctttcaacata 215  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  6942712 aaaaacttactttcaagaagttgataccaagctttcaacata 6942753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 5979078 - 5979029
Alignment:
Q  466 tgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 515  Q
    ||||||||||||||||| |||||||| ||| |||||  ||||||||||||    
T  5979078 tgagtccaagactcttggactccaaactccttcatcagccatataacaaa 5979029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 6934959 - 6935019
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacata 215  Q
    ||||| |||||||||||||| ||| |||| ||||||| || || ||||| |||||||||||    
T  6934959 aacaagtaaatcattgaagagaaaattaccttcaagaagtcgataccaaactttcaacata 6935019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 438 - 518
Target Start/End: Complemental strand, 53774919 - 53774839
Alignment:
Q  438 aagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||| ||| |||||||||| |||||||||||||||||||||| ||||||||||||| |||| | |||||||||||||||    
T  53774919 aagattctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatg 53774839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 518
Target Start/End: Original strand, 11970971 - 11971053
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||| ||| |||||||| | || |||||||||||||||||||  |||||||||||| |||| | |||||||||||||||    
T  11970971 tgaagattatgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaatg 11971053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 3565825 - 3565744
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| ||||||||| |||||| |||||||| |||||    
T  3565825 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 3565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 35767098 - 35767017
Alignment:
Q  437 gaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||| |  ||||||| |||| |||| |||||||||||| ||||||||||||   |||||||||||||||||||||    
T  35767098 gaagattttgatagttaattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatg 35767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 436 - 518
Target Start/End: Complemental strand, 53790634 - 53790552
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||| |||||||||||||| || |||||||||||||| | || || ||||||||   ||||||||||||||| ||||||    
T  53790634 tgaagattctgaaaactaattttaagaaattgagtccaagattgttcaaatccaaattttgtcatcttccatataataaaatg 53790552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 3557807 - 3557726
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| ||||||||| |||| | |||||||| |||||    
T  3557807 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatatgccatataataaaat 3557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 518
Target Start/End: Original strand, 11981665 - 11981754
Alignment:
Q  429 atcaatatgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||| ||||||||  || |||||||||| || ||| ||||||| |||||||  |||||||||||| |||| | |||||||||||||||    
T  11981665 atcaatttgaagattaagataactaattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatataacaaaatg 11981754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 439 - 500
Target Start/End: Complemental strand, 6113157 - 6113096
Alignment:
Q  439 agattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcat 500  Q
    |||| |||| ||||||||   ||||| |||||||||||||||| ||||||||||||||||||    
T  6113157 agatgttgataactaattcgaaggaactgagtccaagactctttaactccaaattccatcat 6113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 19361523 - 19361442
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||||| | |||||||| | || |||||||||| |||||| |||| ||||||    ||||||||||||||||||||    
T  19361523 tgaagattttgatacctaattttaatgagttgagtccaaaactcttcaacttcaaattattccatcttccatataacaaaat 19361442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 53775161 - 53775098
Alignment:
Q  155 aacaattaaatcattgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    ||||| |||||| | |||||  ||||||||||||| | ||||| ||||||||||||||||||||    
T  53775161 aacaagtaaatcttggaagaggaacttactttcaacacgttgataccaagctttcaacataatc 53775098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 2911378 - 2911332
Alignment:
Q  172 agaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    |||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  2911378 agaagaacttactttcaagaagttgataccaagctttctacataatc 2911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 19359218 - 19359160
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattc 494  Q
    |||||||||||| | |||||||| |  | ||||||||||||||||| ||||||||||||    
T  19359218 tgaagattttgatacctaattttaataagttgagtccaagactcttcaactccaaattc 19359160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 493
Target Start/End: Original strand, 3560947 - 3561004
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaatt 493  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| |||||||    
T  3560947 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaatt 3561004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 298
Target Start/End: Complemental strand, 3565965 - 3565936
Alignment:
Q  269 tattatctctccaattatagagaattgcat 298  Q
    ||||||||||||||||||||||||||||||    
T  3565965 tattatctctccaattatagagaattgcat 3565936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 518
Target Start/End: Original strand, 8443456 - 8443525
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||| |  |||||| |||||||||| ||||||||||| ||| |||||| ||| |||||| ||||    
T  8443456 aactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatg 8443525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 837830 - 837774
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||| |||||||||||||||| ||||| | | |||| | ||||||||||||||||    
T  837830 aattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatgg 837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 511
Target Start/End: Original strand, 1686301 - 1686349
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    ||||||||||||||||| | ||| ||||||||| |||||| ||||||||    
T  1686301 aattgagtccaagactcgtcaacgccaaattccttcatctgccatataa 1686349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 525
Target Start/End: Original strand, 10553548 - 10553624
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatggattccc 525  Q
    ||||||| || || || ||| |||||||||||||||||||||| ||  |||| ||||||| ||||| |||| |||||    
T  10553548 aactaatgttaagcaactgaatccaagactcttgaactccaaaatctgtcattttccataaaacaagatggcttccc 10553624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 439 - 518
Target Start/End: Original strand, 29597544 - 29597623
Alignment:
Q  439 agattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||||||||||||| ||||||||||||||||| | || |||||||||||| ||||| | |||||||||||||||    
T  29597544 agattttgaaaactaattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatataacaaaatg 29597623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 439 - 518
Target Start/End: Complemental strand, 29647754 - 29647675
Alignment:
Q  439 agattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||||||||||||| ||||||||||||||||| | || || ||||||||| ||||| | |||||||||||||||    
T  29647754 agattttgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacaaaatg 29647675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 17587094 - 17587182
Alignment:
Q  35 ttctcaaaagtgcagctacattcctttgtgaaaagagtaatagagaaattagcttcaaccttgatgaatataagccagtaccacaagtg 123  Q
    |||||||||||||||| |||||| ||| |||||||||||||| |||||||||||| || |||||||  || |||| ||||||| |||||    
T  17587094 ttctcaaaagtgcagcaacattcttttttgaaaagagtaataaagaaattagcttgaaacttgatgcctaaaagctagtaccataagtg 17587182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 454 - 519
Target Start/End: Original strand, 28763912 - 28763977
Alignment:
Q  454 attttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 519  Q
    |||||||||||| || ||||||||| || ||||||||||| | |||||||||||||||||||||||    
T  28763912 attttgaggaatcgactccaagacttttcaactccaaattgcgtcatcttccatataacaaaatgg 28763977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 518
Target Start/End: Complemental strand, 29642437 - 29642358
Alignment:
Q  439 agattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||| |||||||||||||| ||||||||||||||||| | || || ||||||||| ||||| | ||||||||| |||||    
T  29642437 agattctgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacgaaatg 29642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 23086833 - 23086784
Alignment:
Q  466 tgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 515  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  23086833 tgagtccaagactcttgaactccaaactccttcatctgccatataacaaa 23086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 24330901 - 24330969
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||| ||| |||| |||||||||||| |||| ||| ||||||||| |||||| ||||||||||||||    
T  24330901 aactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 24330969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 511
Target Start/End: Original strand, 18964819 - 18964894
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataa 511  Q
    |||||||| ||| ||| |||||| || |||||||||||||| |||| ||||||||||||| |||| | ||||||||    
T  18964819 tgaagattctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 18964894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 517
Target Start/End: Complemental strand, 42298177 - 42298111
Alignment:
Q  451 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||| |||| |||||||||||||||| | || | |||||||||| ||||||||||||||||| ||||    
T  42298177 ctaactttgtggaattgagtccaagaattttcatctccaaattctatcatcttccatataactaaat 42298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 42298420 - 42298374
Alignment:
Q  172 agaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  42298420 agaagaacttactttcaagaagttgaaaccaagctttcgacataatc 42298374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 24330613 - 24330666
Alignment:
Q  170 gaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattgg 223  Q
    ||||| |||||||||||||| |  ||| ||| ||||||||||||||||||||||    
T  24330613 gaagagaaacttactttcaaaaacttggaactaagctttcaacataatcattgg 24330666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 518
Target Start/End: Original strand, 4671 - 4740
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    ||||||||||||  || |||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  4671 aactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatg 4740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 517
Target Start/End: Original strand, 39379050 - 39379131
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||  ||| |||| ||||| || ||||||||||||||||||| ||| ||||||||| |||||| |||||||| |||||    
T  39379050 tgaagatcatgataactgattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 39379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 21855385 - 21855453
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||| ||| |||| |||||||||||| |||| ||| ||||||||| |||||| ||||||||||||||    
T  21855385 aactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 21855453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 4014967 - 4015032
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaa 514  Q
    |||||| ||| ||||||||||||||||| |||| ||| ||||||| | |||||| |||||||||||    
T  4014967 aactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataacaa 4015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 518
Target Start/End: Original strand, 50645487 - 50645556
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||||| |  |||||| |||||||||||||||||||||| ||| |||| | ||| |||||||||||    
T  50645487 aactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaatg 50645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 517
Target Start/End: Complemental strand, 4570995 - 4570927
Alignment:
Q  449 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||| || |||||||||||||| |||| ||| ||||||| | |||| | ||||||||||||||    
T  4570995 aactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaat 4570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 21855097 - 21855150
Alignment:
Q  170 gaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcattgg 223  Q
    ||||| |||||||||||||| |  ||| ||| ||||||||||||||||||||||    
T  21855097 gaagagaaacttactttcaaaaacttggaactaagctttcaacataatcattgg 21855150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 31442231 - 31442267
Alignment:
Q  32 taattctcaaaagtgcagctacattcctttgtgaaaa 68  Q
    ||||||||||||||||||||| || ||||||||||||    
T  31442231 taattctcaaaagtgcagctatatccctttgtgaaaa 31442267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 25930 - 25879
Alignment:
Q  169 tgaagaaaaacttactttcaagaggttgaaaccaagctttcaacataatcat 220  Q
    ||||||||||||||||||||| || || ||||||||||||| ||||||||||    
T  25930 tgaagaaaaacttactttcaacagattaaaaccaagctttcgacataatcat 25879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 4446 - 4400
Alignment:
Q  172 agaaaaacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  4446 agaagaacttactttcaagaagttgaaaccaagctttcgacataatc 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 517
Target Start/End: Original strand, 16395 - 16442
Alignment:
Q  470 tccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  16395 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 16442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 16132 - 16172
Alignment:
Q  177 aacttactttcaagaggttgaaaccaagctttcaacataat 217  Q
    ||||||||||||| | ||||||||||||||||| |||||||    
T  16132 aacttactttcaacaagttgaaaccaagctttcgacataat 16172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000008; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 27618765 - 27618724
Alignment:
Q  177 aacttactttcaagaggttgaaaccaagctttcaacataatc 218  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  27618765 aacttactttcaagaaattgaaaccaagctttcaacataatc 27618724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 518
Target Start/End: Complemental strand, 27618572 - 27618490
Alignment:
Q  436 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 518  Q
    |||||||| ||| |||||| ||| || || |||||||||||||||| |||||| | |||   ||| |||||||||||||||||    
T  27618572 tgaagattctgataactaactttaagcaactgagtccaagactcttcaactccgagttcttccattttccatataacaaaatg 27618490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 29390340 - 29390288
Alignment:
Q  463 aattgagtccaagactcttgaactccaaattccatcatcttccatataacaaa 515  Q
    |||| ||| ||||| |||| ||||||||||||| |||||| ||||||||||||    
T  29390340 aatttagttcaagattcttcaactccaaattccctcatctgccatataacaaa 29390288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 516
Target Start/End: Complemental strand, 24271 - 24206
Alignment:
Q  451 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaa 516  Q
    |||| ||| ||||||||||| ||||||| || | ||||| ||||  ||||||||||||||||||||    
T  24271 ctaaatttaaggaattgagttcaagacttttcatctccatattctgtcatcttccatataacaaaa 24206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 5514 - 5438
Alignment:
Q  441 attttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaat 517  Q
    ||||||| |||||| ||| |||||   |||||||||||||| ||||| |||||   |||||| ||||||||||||||    
T  5514 attttgataactaaatttaaggaacatagtccaagactcttcaactctaaattttttcatctgccatataacaaaat 5438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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