View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11751_low_9 (Length: 521)

Name: NF11751_low_9
Description: NF11751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11751_low_9
NF11751_low_9
[»] chr5 (34 HSPs)
chr5 (219-507)||(20695093-20695381)
chr5 (218-451)||(20083959-20084192)
chr5 (207-450)||(7742306-7742548)
chr5 (259-451)||(19763310-19763502)
chr5 (208-459)||(16622050-16622300)
chr5 (342-451)||(17028852-17028961)
chr5 (207-451)||(24131080-24131325)
chr5 (204-451)||(18281630-18281878)
chr5 (207-451)||(18178591-18178834)
chr5 (207-403)||(31340818-31341012)
chr5 (261-451)||(25594073-25594262)
chr5 (337-443)||(12265031-12265137)
chr5 (327-451)||(18451652-18451776)
chr5 (201-305)||(23157350-23157454)
chr5 (337-451)||(24268673-24268785)
chr5 (337-451)||(24345303-24345415)
chr5 (322-451)||(17381423-17381552)
chr5 (287-451)||(30791145-30791307)
chr5 (350-432)||(15694640-15694722)
chr5 (259-432)||(22930468-22930642)
chr5 (342-459)||(12339447-12339563)
chr5 (342-459)||(22230331-22230448)
chr5 (287-393)||(26329532-26329635)
chr5 (207-403)||(17694916-17695115)
chr5 (386-451)||(24517754-24517819)
chr5 (354-443)||(31267659-31267748)
chr5 (337-444)||(24842265-24842371)
chr5 (331-442)||(25945813-25945924)
chr5 (352-445)||(11997309-11997403)
chr5 (337-459)||(20715162-20715283)
chr5 (475-507)||(15693261-15693293)
chr5 (343-387)||(30072703-30072747)
chr5 (201-447)||(25368083-25368323)
chr5 (267-304)||(25681109-25681146)
[»] chr4 (42 HSPs)
chr4 (201-451)||(29437867-29438118)
chr4 (201-450)||(19602221-19602471)
chr4 (327-451)||(5676763-5676887)
chr4 (287-459)||(26188284-26188455)
chr4 (237-451)||(4733185-4733399)
chr4 (290-451)||(10576993-10577155)
chr4 (237-446)||(33519513-33519722)
chr4 (342-459)||(9782511-9782627)
chr4 (207-451)||(31859314-31859546)
chr4 (337-447)||(1695327-1695436)
chr4 (237-447)||(22120145-22120355)
chr4 (322-451)||(18444772-18444899)
chr4 (237-382)||(13066212-13066359)
chr4 (345-451)||(7023645-7023752)
chr4 (369-451)||(9288538-9288620)
chr4 (358-420)||(21047790-21047852)
chr4 (353-451)||(39134207-39134305)
chr4 (337-459)||(47024163-47024284)
chr4 (342-459)||(10450892-10451008)
chr4 (343-459)||(27303311-27303425)
chr4 (17-117)||(33519238-33519338)
chr4 (342-460)||(12806368-12806485)
chr4 (337-459)||(15192809-15192929)
chr4 (331-451)||(17332065-17332187)
chr4 (345-459)||(18898579-18898692)
chr4 (287-443)||(17024355-17024507)
chr4 (6-103)||(29437658-29437755)
chr4 (342-449)||(25314665-25314770)
chr4 (344-403)||(17184091-17184150)
chr4 (408-459)||(24041816-24041867)
chr4 (342-449)||(51885213-51885319)
chr4 (219-352)||(26160277-26160410)
chr4 (341-451)||(24576922-24577029)
chr4 (353-459)||(22219294-22219400)
chr4 (264-433)||(32022266-32022436)
chr4 (354-451)||(34667288-34667386)
chr4 (331-451)||(12110748-12110867)
chr4 (350-452)||(10079586-10079689)
chr4 (345-451)||(16441637-16441744)
chr4 (207-346)||(23354039-23354178)
chr4 (363-448)||(20985035-20985120)
chr4 (207-340)||(21077722-21077855)
[»] chr3 (32 HSPs)
chr3 (218-459)||(11475319-11475560)
chr3 (218-443)||(21828626-21828853)
chr3 (201-451)||(26298223-26298473)
chr3 (322-451)||(8401823-8401952)
chr3 (322-451)||(14280708-14280837)
chr3 (228-451)||(26419223-26419446)
chr3 (261-459)||(19218604-19218802)
chr3 (222-432)||(18474669-18474880)
chr3 (228-451)||(19542510-19542734)
chr3 (322-451)||(19263305-19263435)
chr3 (329-448)||(10342330-10342449)
chr3 (354-443)||(28731053-28731142)
chr3 (261-451)||(2729014-2729200)
chr3 (331-451)||(27415694-27415813)
chr3 (259-412)||(19285600-19285746)
chr3 (355-459)||(23907699-23907804)
chr3 (349-446)||(25883651-25883747)
chr3 (324-449)||(21806070-21806195)
chr3 (324-443)||(22488295-22488414)
chr3 (342-451)||(21653960-21654070)
chr3 (331-420)||(18066245-18066334)
chr3 (359-451)||(5632033-5632125)
chr3 (351-415)||(16973214-16973278)
chr3 (295-386)||(28731148-28731238)
chr3 (353-451)||(33578358-33578457)
chr3 (331-423)||(21018176-21018268)
chr3 (390-458)||(26387230-26387298)
chr3 (352-459)||(11521775-11521881)
chr3 (337-393)||(13911874-13911930)
chr3 (331-446)||(33914027-33914140)
chr3 (219-304)||(22489644-22489729)
chr3 (407-451)||(16996477-16996521)
[»] chr7 (48 HSPs)
chr7 (207-452)||(5636657-5636904)
chr7 (266-451)||(5312197-5312383)
chr7 (223-447)||(24596418-24596643)
chr7 (261-432)||(4091925-4092096)
chr7 (207-451)||(22334703-22334948)
chr7 (237-451)||(18466990-18467205)
chr7 (337-459)||(21545268-21545388)
chr7 (345-451)||(3400417-3400523)
chr7 (331-459)||(20446788-20446915)
chr7 (348-459)||(2629937-2630047)
chr7 (353-450)||(9405280-9405376)
chr7 (358-459)||(23072921-23073022)
chr7 (264-451)||(20017492-20017676)
chr7 (343-451)||(23126710-23126817)
chr7 (345-451)||(11467499-11467605)
chr7 (347-432)||(315717-315801)
chr7 (346-459)||(7815898-7816010)
chr7 (322-451)||(9760667-9760796)
chr7 (342-459)||(21472367-21472483)
chr7 (354-459)||(26839613-26839717)
chr7 (345-459)||(7326396-7326510)
chr7 (348-451)||(20040243-20040345)
chr7 (337-439)||(7777524-7777625)
chr7 (365-451)||(30406182-30406268)
chr7 (342-447)||(7493865-7493969)
chr7 (201-305)||(4829273-4829377)
chr7 (237-451)||(9801022-9801237)
chr7 (259-451)||(11082043-11082234)
chr7 (359-457)||(21544305-21544400)
chr7 (348-451)||(20050396-20050498)
chr7 (337-447)||(9071005-9071114)
chr7 (234-410)||(9552623-9552801)
chr7 (359-457)||(21536961-21537059)
chr7 (342-443)||(7151461-7151561)
chr7 (259-377)||(2092863-2092981)
chr7 (342-415)||(18468177-18468250)
chr7 (342-420)||(20470224-20470304)
chr7 (337-459)||(7142631-7142756)
chr7 (364-451)||(10054351-10054439)
chr7 (322-394)||(17880418-17880490)
chr7 (312-459)||(15757981-15758127)
chr7 (337-443)||(19139383-19139490)
chr7 (337-443)||(20738782-20738889)
chr7 (353-451)||(23744526-23744625)
chr7 (263-444)||(12358300-12358480)
chr7 (237-275)||(21472265-21472303)
chr7 (255-305)||(21537111-21537161)
chr7 (411-459)||(39249633-39249681)
[»] chr8 (32 HSPs)
chr8 (196-500)||(11437839-11438143)
chr8 (237-443)||(30850480-30850686)
chr8 (207-447)||(6887627-6887867)
chr8 (209-451)||(12774282-12774525)
chr8 (323-459)||(12957076-12957212)
chr8 (201-451)||(18771377-18771628)
chr8 (218-451)||(28074952-28075187)
chr8 (257-451)||(13583031-13583226)
chr8 (237-507)||(27084933-27085202)
chr8 (196-447)||(30544169-30544424)
chr8 (207-459)||(24120711-24120960)
chr8 (342-448)||(13304986-13305091)
chr8 (337-451)||(23876526-23876637)
chr8 (327-451)||(32239835-32239958)
chr8 (350-459)||(29046716-29046824)
chr8 (322-451)||(24927273-24927403)
chr8 (331-444)||(28259968-28260079)
chr8 (259-451)||(5154278-5154468)
chr8 (342-447)||(28900748-28900851)
chr8 (342-429)||(16051739-16051827)
chr8 (264-451)||(24094667-24094851)
chr8 (264-451)||(15213178-15213358)
chr8 (310-451)||(28290787-28290925)
chr8 (345-447)||(13529539-13529642)
chr8 (345-447)||(13619078-13619181)
chr8 (337-431)||(22892678-22892773)
chr8 (353-459)||(11308243-11308348)
chr8 (391-451)||(14184556-14184616)
chr8 (322-393)||(23893664-23893735)
chr8 (385-441)||(27118190-27118246)
chr8 (474-507)||(29292573-29292606)
chr8 (201-305)||(18786128-18786232)
[»] scaffold0386 (2 HSPs)
scaffold0386 (207-451)||(11179-11423)
scaffold0386 (207-450)||(8150-8393)
[»] chr2 (30 HSPs)
chr2 (207-451)||(21842614-21842858)
chr2 (207-451)||(21844243-21844485)
chr2 (209-445)||(17883988-17884224)
chr2 (218-449)||(18819142-18819371)
chr2 (322-458)||(9504480-9504617)
chr2 (322-458)||(9515846-9515983)
chr2 (250-451)||(14921508-14921707)
chr2 (270-451)||(18235730-18235912)
chr2 (331-447)||(25474580-25474695)
chr2 (201-451)||(24188458-24188704)
chr2 (345-443)||(20518686-20518784)
chr2 (342-447)||(18532962-18533066)
chr2 (238-305)||(27917588-27917655)
chr2 (358-459)||(27917454-27917555)
chr2 (259-451)||(21503997-21504189)
chr2 (364-459)||(35708374-35708468)
chr2 (342-432)||(1733688-1733777)
chr2 (313-451)||(27416680-27416817)
chr2 (347-459)||(21847874-21847986)
chr2 (342-459)||(41256782-41256898)
chr2 (201-451)||(25460371-25460616)
chr2 (376-459)||(23909072-23909154)
chr2 (342-409)||(30999356-30999423)
chr2 (355-449)||(16593198-16593291)
chr2 (207-451)||(24047785-24048034)
chr2 (365-442)||(19592633-19592710)
chr2 (218-382)||(39732120-39732284)
chr2 (352-447)||(19948942-19949031)
chr2 (207-451)||(15453921-15454163)
chr2 (337-382)||(31274415-31274460)
[»] chr1 (32 HSPs)
chr1 (259-451)||(52270639-52270833)
chr1 (220-507)||(21549113-21549398)
chr1 (287-456)||(14744859-14745028)
chr1 (207-451)||(34533082-34533326)
chr1 (261-460)||(11984630-11984828)
chr1 (261-447)||(23223884-23224068)
chr1 (322-451)||(50047654-50047784)
chr1 (322-451)||(11769420-11769549)
chr1 (201-443)||(26853748-26853990)
chr1 (207-415)||(15298326-15298534)
chr1 (352-451)||(19257382-19257481)
chr1 (322-451)||(30675993-30676121)
chr1 (259-451)||(31314049-31314241)
chr1 (219-409)||(25778199-25778390)
chr1 (237-447)||(25665210-25665421)
chr1 (201-431)||(23506221-23506452)
chr1 (356-447)||(18300464-18300556)
chr1 (342-451)||(15416457-15416567)
chr1 (331-451)||(9328573-9328692)
chr1 (218-376)||(25730939-25731098)
chr1 (337-459)||(12810741-12810862)
chr1 (331-447)||(9353536-9353651)
chr1 (337-449)||(26658071-26658181)
chr1 (331-458)||(9252077-9252203)
chr1 (337-459)||(23519148-23519269)
chr1 (376-459)||(23521144-23521226)
chr1 (207-304)||(25126900-25126997)
chr1 (366-459)||(30782294-30782386)
chr1 (364-460)||(34933436-34933537)
chr1 (389-439)||(23421085-23421136)
chr1 (409-459)||(24903217-24903267)
chr1 (207-335)||(27460412-27460540)
[»] scaffold0190 (1 HSPs)
scaffold0190 (219-507)||(11027-11317)
[»] chr6 (32 HSPs)
chr6 (211-447)||(22262835-22263070)
chr6 (261-444)||(26499280-26499463)
chr6 (342-451)||(17859899-17860008)
chr6 (218-457)||(32929882-32930122)
chr6 (237-451)||(13830321-13830539)
chr6 (261-459)||(16528157-16528340)
chr6 (342-458)||(9725597-9725712)
chr6 (207-451)||(9396013-9396264)
chr6 (322-451)||(16174770-16174900)
chr6 (331-447)||(30235794-30235907)
chr6 (342-447)||(30756223-30756332)
chr6 (349-451)||(13723285-13723387)
chr6 (342-440)||(15575532-15575629)
chr6 (342-451)||(19670033-19670141)
chr6 (323-451)||(12971778-12971903)
chr6 (311-456)||(28178544-28178689)
chr6 (342-457)||(15349303-15349415)
chr6 (342-459)||(15376023-15376140)
chr6 (342-452)||(15369299-15369406)
chr6 (349-459)||(15319421-15319531)
chr6 (342-451)||(16439934-16440044)
chr6 (348-459)||(15370060-15370171)
chr6 (347-459)||(15386496-15386608)
chr6 (312-459)||(1558248-1558394)
chr6 (287-459)||(15382216-15382393)
chr6 (207-297)||(17198379-17198469)
chr6 (412-458)||(25939700-25939746)
chr6 (474-507)||(1130292-1130325)
chr6 (346-459)||(15376317-15376430)
chr6 (255-285)||(28178497-28178527)
chr6 (342-375)||(15318654-15318687)
chr6 (401-449)||(21907318-21907366)
[»] scaffold0337 (1 HSPs)
scaffold0337 (218-458)||(3606-3849)
[»] scaffold0065 (1 HSPs)
scaffold0065 (220-458)||(12741-12982)
[»] scaffold0100 (1 HSPs)
scaffold0100 (342-458)||(37572-37688)
[»] scaffold0855 (1 HSPs)
scaffold0855 (345-459)||(2433-2546)
[»] scaffold0847 (1 HSPs)
scaffold0847 (345-459)||(2598-2711)
[»] scaffold0186 (1 HSPs)
scaffold0186 (342-451)||(33163-33272)
[»] scaffold0650 (1 HSPs)
scaffold0650 (287-450)||(5156-5315)
[»] scaffold0362 (1 HSPs)
scaffold0362 (337-447)||(8239-8348)
[»] scaffold0624 (1 HSPs)
scaffold0624 (355-459)||(4614-4717)
[»] scaffold0282 (1 HSPs)
scaffold0282 (337-459)||(22030-22151)
[»] scaffold0103 (1 HSPs)
scaffold0103 (342-460)||(36987-37104)
[»] scaffold0171 (2 HSPs)
scaffold0171 (394-451)||(6787-6844)
scaffold0171 (405-459)||(21972-22026)
[»] scaffold0011 (1 HSPs)
scaffold0011 (322-459)||(227607-227746)
[»] scaffold1668 (1 HSPs)
scaffold1668 (408-460)||(642-694)


Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 219 - 507
Target Start/End: Original strand, 20695093 - 20695381
Alignment:
Q  219 taagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggc 318  Q
    |||||||| ||| | || |||||||||| | |||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20695093 taagtaatgatgtactataaatagagactcttgcaaaccttttcattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggc 20695192  T
Q  319 aatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattaggg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20695193 aatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgctgccatgtgcaactaaaactctttgattaggg 20695292  T
Q  419 ttctacgatgaacctcttcttatttgttggatttcattaattnnnnnnnnnttcggtttatgatctaaagtctgatttaatttgtatat 507  Q
    |||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  20695293 ttctacgatgaaccccttcttatttgttggatttcattaattaaaaaaaaattcggtttatgatctaaagtctgatttaatttgtatat 20695381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 218 - 451
Target Start/End: Original strand, 20083959 - 20084192
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||| | || ||||||| |||| | |||||| |||||||| || |||||||||| |||| || | || |||||||||||  ||||||||||    
T  20083959 ctaagtaatgatgtaatataaatagataccctttcatactcttttattcttttagaaagctagaggtacaaagaaaaggtcaagcatcagaacttcaagg 20084058  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagg 417  Q
     |   |||| ||||| || | || ||||||||||||||||||||| |||| |||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  20084059 aagaagatcctcatcatcctgttgttctctctagggtatgtttttatattattttgtaatgatggttgttaccatgtgcaactaaatctctttgattagg 20084158  T
Q  418 gttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| | |||||||| ||||||||||||||||||    
T  20084159 gttccatgatgaaccccttcttatttgttggatt 20084192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 207 - 450
Target Start/End: Complemental strand, 7742548 - 7742306
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||| ||| |||||||| |||||||||||| |||| ||| ||||| ||||||| |||| |||||||| |||||||||||||| ||||     
T  7742548 tctcttaacccctaagcaatgatgcattataaatagagacccttgcacactcttttaatcattcaaaaagttagtggtacaaggcaagggtcaaacatca 7742449  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     | ||||||| ||  ||||||||||| || |||| || |||| | ||||| |||||||| |||||| |||||||||  |||| ||||||||||||||  |    
T  7742448 aagcttcaagtcagaggatcttcatcatcctcttgttttctcaatggtatatttttctactgttttctaatgatgtccgttgtcatgtgcaactaaactt 7742349  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggat 450  Q
    |||| |||||||||| | |||||||| |||||||||||||||||    
T  7742348 ctttaattagggttccaagatgaacc-cttcttatttgttggat 7742306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 19763502 - 19763310
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||  | ||||||||||  |||||||||||||| |||| ||||||| |||||| ||    
T  19763502 ttttattcattcaaaaagctagtggtacaaggcaagggtcaaacatcaaagcttcaaggcagaggatcttcatcctcctcttgttctctcaagggtaagt 19763403  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||  |||| ||||||||| ||||  ||||| |||||||| |||||| ||||||||||   |||||||  ||||||||||||||||||    
T  19763402 ttttctatatttttataatgatgtttgttaacatgtacaactaaacctctttaattagggttccttgatgaactccttcttatttgttggatt 19763310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 208 - 459
Target Start/End: Complemental strand, 16622300 - 16622050
Alignment:
Q  208 ctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgc 307  Q
    ||||||||||||||||||| || ||||| |||||||||| | |||| |   ||||||| ||||| ||||||||||||  |||||||| |||||||||       
T  16622300 ctcttaaactctaagtaatcatacattataaatagagactcttgcacatacttttatttattcataaagctagtggttcaaggcaagagtcaagcattag 16622201  T
Q  308 aacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactc 407  Q
    |  | |||| |   || ||| ||||||  |||| |||||| |||||||||||||||||||||||||| |||  |||||||| |||||||||||||| |||    
T  16622200 agttccaagactgagggtctccatccttctcttgttctctttagggtatgtttttctattgttttgttatggcgtatgttgtcatgtgcaactaaacctc 16622101  T
Q  408 tttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||| |||||||||| | || ||||| |||||| |||||||||||||||||||    
T  16622100 tttaattagggttcgaagaagaacc-cttcttgtttgttggatttcattaat 16622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 17028852 - 17028961
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  17028852 ttctctttagggtatatttttctattgatttgtaatgatgtatgttaccatgtgcaactaaacctctttgatcagggttctaagatgaacctcttcttat 17028951  T
Q  442 ttgttggatt 451  Q
    ||||||||||    
T  17028952 ttgttggatt 17028961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 451
Target Start/End: Original strand, 24131080 - 24131325
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| ||| ||||| ||| | || |||||||||||| | |||||   |||| ||||| |||||||||||| || | |||||||||||||||||     
T  24131080 tctcttaaaccctatgtaatgatgaactataaatagagacccttacatacacctttaatcatttagaaagctagtgatacatggcaagggtcaagcatca 24131179  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |||||  |||||| |||| ||| |  ||||||| ||||||||||| |||| |||| |||| ||||||||||||||  ||| ||||||| ||||||| ||    
T  24131180 gaacttttaggcaaaggattttcctaatcttcttgttctctctaggatatgcttttatattattttgtaatgatgtcggttaccatgtgaaactaaacct 24131279  T
Q  407 ct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    || |||||| |||||| | |||||||||||| ||||||||||||||    
T  24131280 ctcttgattggggttccaagatgaacctcttattatttgttggatt 24131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 18281878 - 18281630
Alignment:
Q  204 cactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagca 303  Q
    ||||||||||| | ||||||||| ||||| || |||||| ||||| |||| ||| |||| |||||||||||||||||  ||  |||||||  ||||| ||    
T  18281878 cactctcttaacccctaagtaatcatgcaatataaatagtgacccttgcacactcttttcttcattcagaaagctagcagtgcaaggcaaacgtcaaaca 18281779  T
Q  304 tc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaa 402  Q
    || | | |||||||| |  ||| || |||| || |||| ||||||||||||||| |||||||||| || || ||||||||  ||||||||| | ||||||    
T  18281778 tcaggagcttcaaggtagaggacctccatcgtcctcttgttctctctagggtatatttttctatttttatgcaatgatgtcggttgccatgagtaactaa 18281679  T
Q  403 aactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    | |||||||||||| |||| |||| ||||| ||||||||||||||||||    
T  18281678 acctctttgattagcgttccacgacgaaccacttcttatttgttggatt 18281630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 207 - 451
Target Start/End: Original strand, 18178591 - 18178834
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||||| ||  ||||||||||| |||| ||| ||||||||||||| ||||||| ||||| ||||||| |||||| ||||     
T  18178591 tctcttaacccctaagtaatgatgcaatatcaatagagacccttgcacacttttttattcattcaaaaagctaatggtacaaggcaatggtcaaacatca 18178690  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     | ||| ||||    |||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||| ||||  ||||| |||| | ||||||  |    
T  18178691 gagcttaaaggtggaggatcttcatcctcctcttgttctctctagggtat-tttttttattgttttgtaataatgtcagttgcgatgtactactaaactt 18178789  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
     |||||||||| ||| | |||||| |||| |||| |||| |||||    
T  18178790 atttgattaggattccaagatgaaactctgcttacttgtaggatt 18178834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 403
Target Start/End: Complemental strand, 31341012 - 31340818
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    ||||| || |||||||||||  || | || |||||||||||| |||| ||| ||  |||||||| |||||||||   || || ||||||||||| |||||    
T  31341012 tctctaaatctctaagtaatggtgtactataaatagagacccttgcacactcttaaattcattctgaaagctagatatacaaagcaagggtcaaacatcg 31340913  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaa 403  Q
     | ||||||||||  ||||||  ||||||||||| ||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31340912 aagcttcaaggcagaggatctcaatcctcttcttgttctctctta--tatgtttttctattgttttgtaatgatgtatgttgtcatgtgcaactaaa 31340818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 261 - 451
Target Start/End: Complemental strand, 25594262 - 25594073
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttt 360  Q
    ||||||||| | ||||||||||||  ||||||||||| || ||||  | || ||||| |  || ||||||||||| |||| ||||||||| | |||||||    
T  25594262 ttattcatttataaagctagtggttcaaggcaagggttaaacatcagagctccaaggaagagggtcttcatcctcctcttgttctctctaagatatgttt 25594163  T
Q  361 ttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||| ||||||| |||||| ||| | ||||||| |||||||||||||| | || ||||||| |||| |||||| |||||||    
T  25594162 ttctattgttttgttatgatgtttgttgcaatgagtaactaaacctctttgattagggatata-gatgaacttctttttatttattggatt 25594073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 12265137 - 12265031
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||| | ||| |||| ||||||||| |||||||||||||||| || |||||||| |||    
T  12265137 tcttgttctctctagtgtatatttttctattgttttgtaatgatgtgtattgtcatgagcaactaaacctctttgattagggttataagatgaacccctt 12265038  T
Q  437 cttattt 443  Q
    |||||||    
T  12265037 cttattt 12265031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 327 - 451
Target Start/End: Complemental strand, 18451776 - 18451652
Alignment:
Q  327 ttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacga 426  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||  | |||| ||||  |||| ||||||||| |||||| ||||||||  || ||    
T  18451776 ttcatcctcttcttgttctctctaggatatgtttttctattgttttgtttttatgtctgttttcatgagcaactaaacctctttaattagggtgataaga 18451677  T
Q  427 tgaacctcttcttatttgttggatt 451  Q
    ||||||  |||||||||||||||||    
T  18451676 tgaaccctttcttatttgttggatt 18451652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 23157454 - 23157350
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | ||||||||| |||||||| ||| |||||||| |||| |||||||||||||||||||||| | |  ||| ||||||||||||||    
T  23157454 tttcactctcttaacccctaagtaatcatgcattataaaaagagacccttgcacactattttattcattcagaaagttggcagtacaaggcaagggtcaa 23157355  T
Q  301 gcatc 305  Q
    |||||    
T  23157354 gcatc 23157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 24268673 - 24268785
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||| ||| ||||||||| ||| |  ||||||| |||    
T  24268673 tcttgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacctc-ttgattaggattccaaaatgaacc-ctt 24268770  T
Q  437 cttatttgttggatt 451  Q
    |||||||||||||||    
T  24268771 cttatttgttggatt 24268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 24345303 - 24345415
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||| ||| ||||||||| ||| |  ||||||| |||    
T  24345303 tcttgttctctttagggtatgtttttatattgttttgttatgatgtatattgccatgagcaactaaacctc-ttgattaggattccaaaatgaacc-ctt 24345400  T
Q  437 cttatttgttggatt 451  Q
    |||||||||||||||    
T  24345401 cttatttgttggatt 24345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 17381552 - 17381423
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| | || ||||||||||||||||| ||| ||||||||| ||||||||| ||||||||| |||||||||| |||||| |||  | ||     
T  17381552 ggatctccatcctccttttgttctctctagggtatgtatttatattgttttataatgatgtttgttgccatatgcaactaaacctctttaatttagtttt 17381453  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     | |||||| | ||||||||||||||||||    
T  17381452 caagatgaatcccttcttatttgttggatt 17381423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 451
Target Start/End: Original strand, 30791145 - 30791307
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||| |||| |||||||||  | ||| ||||||  ||||||| || ||| |||| |||||||||||| ||| || ||||||| |||||||||  |||||     
T  30791145 aaggaaaggttcaagcatcagagctttaaggcagaggatcttgattctcctcttgttctctctagggcatgcttgtctattgctttgtaatg--gtatgc 30791242  T
Q  387 tgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    || |||||||||||||| ||||||||| ||||||| ||||  |||| |||||||||| |||||||    
T  30791243 tgtcatgtgcaactaaacctctttgatcagggttccacgagaaaccccttcttattttttggatt 30791307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 15694722 - 15694640
Alignment:
Q  350 agggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacc 432  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||| || |||| ||||||||||||||||| || |||||||    
T  15694722 agggtatatttttctattgttttgtaatgatgtcagttgccatgtgaaattaaacctctttgattagggttccacaatgaacc 15694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 432
Target Start/End: Original strand, 22930468 - 22930642
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||||||||| |||| ||   ||| |||||||||||||| |||   | ||| |||| |  |||||| ||||||| | || || |||||||| |||||    
T  22930468 ttttattcattcataaaggtaccagtacaaggcaagggtcaaacataagagctttaaggtagaggatctccatcctccttttgttatctctaggttatgt 22930567  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacc 432  Q
    ||||||||||||||||||||||||||| |  | |||||||| ||| |||| ||||||| ||||| ||||||||||    
T  22930568 ttttctattgttttgtaatgatgtatgctatcgtgtgcaacaaaacctctcttgattaaggttccacgatgaacc 22930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 12339563 - 12339447
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| ||||||| ||| ||||||||| |||||| ||||| | |||||||||| ||||||||  ||||| ||||||||||| |||||||||| ||||||||    
T  12339563 ttctttctagggcatggttttctattattttgttatgatctttgttgccatgagcaactaatcctctt-gattagggttccacgatgaaccccttcttat 12339465  T
Q  442 ttgttggatttcattaat 459  Q
    || ||||| || ||||||    
T  12339464 ttattggaatttattaat 12339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 22230331 - 22230448
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| ||||||||||||||||||| |||||| | ||||||| |||| ||| | ||||||||| || ||| ||||| |||| |||||||||| |||  |||    
T  22230331 ttctatctagggtatgtttttctactgttttcttatgatgtttgtttccacgagcaactaaaccttttttattagagttccacgatgaaccccttgctat 22230430  T
Q  442 ttgttggatttcattaat 459  Q
    |||||||| || ||||||    
T  22230431 ttgttggaatttattaat 22230448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 26329635 - 26329532
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    ||||||||||||||||||   | ||||||||||  |||| ||| ||||  |||| | ||||||||||||||||||||||||||||||| ||||||| |||    
T  26329635 aaggcaagggtcaagcattagagcttcaaggca--ggat-ttcttccttctcttatcctctctagggtatgtttttctattgttttgttatgatgtttgt 26329539  T
Q  387 tgccatg 393  Q
    |||||||    
T  26329538 tgccatg 26329532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 403
Target Start/End: Complemental strand, 17695115 - 17694916
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| ||||||||| ||||| || |||||||||  | ||||  |  ||||||||||||| |||| |||  ||| ||||||||| | ||  |||     
T  17695115 tctcttaaaccctaagtaatgatgcactataaatagagagtcttgcacgcacttttattcattcaaaaagttagatgtacaaggcaaggcttaaatatca 17695016  T
Q  307 caacttcaaggcaatggatct---tcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaa 403  Q
     | |||||||||||  ||| |   || ||||| |||  |||| ||||||||||||| |||||||||||||||||||||| || | |||||||||| ||||    
T  17695015 gagcttcaaggcaaatgatttccctcctcctcctctggttctttctagggtatgttattctattgttttgtaatgatgtgtgcttccatgtgcaattaaa 17694916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 24517754 - 24517819
Alignment:
Q  386 ttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||| |||| |||||| ||||||||| || ||||||||| |||||||||||||||||    
T  24517754 ttgccatgtgcaattaaacctcttttattagggttttaagatgaacctattcttatttgttggatt 24517819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 31267748 - 31267659
Alignment:
Q  354 tatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttattt 443  Q
    |||||||||  ||| |||| |||||||||  ||| ||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||    
T  31267748 tatgttttttgattattttataatgatgtcagttaccatgtgaaactaaacatctttgattagggttccacgatgaaccccttcttattt 31267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 24842265 - 24842371
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||||||  ||||| |||||||||||||||| ||||| ||||||| ||||  ||| ||||  || ||||||||||||| | |||||||| |||    
T  24842265 tcttgttctctctatagtatgcttttctattgttttgttatgatatatgttgtcatgaacaagtaaacatc-ttgattagggttccaagatgaacccctt 24842363  T
Q  437 cttatttg 444  Q
    ||||||||    
T  24842364 cttatttg 24842371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 442
Target Start/End: Original strand, 25945813 - 25945924
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| |||| | || ||||| ||||| |||| ||||||||||||||  |||  ||||| |||||||  || |||||||| ||||||| ||||||    
T  25945813 tcctcctcttgttctatttaaggtatatttttttattattttgtaatgatgtcggttatcatgtacaactaagcctatttgattaaggttctaagatgaa 25945912  T
Q  431 cctcttcttatt 442  Q
    ||||||||||||    
T  25945913 cctcttcttatt 25945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 11997403 - 11997309
Alignment:
Q  352 ggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgt 445  Q
    ||||||||| | ||||||||| |||||||||  ||| ||||||| |||||||  ||| ||||||||||||| ||| ||||||||| |||||||||    
T  11997403 ggtatgtttatatattgttttttaatgatgtcggttaccatgtgtaactaaacgtctcttgattagggttccacgttgaacctctacttatttgt 11997309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 20715162 - 20715283
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||| || | |||||||||||||||||||||  |||||| ||||| | || ||||| ||| ||| ||||||||||||  | |||||||   ||    
T  20715162 tcttgttctctatatgatatgtttttctattgttttgttttgatgtttgttgtcttgagcaaccaaacctc-ttgattagggtttcaagatgaactcttt 20715260  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||||||| | ||||||    
T  20715261 cttatttgttggatattattaat 20715283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 507
Target Start/End: Complemental strand, 15693293 - 15693261
Alignment:
Q  475 tttatgatctaaagtctgatttaatttgtatat 507  Q
    |||||||||||||||||||||||||||||||||    
T  15693293 tttatgatctaaagtctgatttaatttgtatat 15693261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 30072703 - 30072747
Alignment:
Q  343 tctctctagggtatgtttttctattgttttgtaatgatgtatgtt 387  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||    
T  30072703 tctctctagggtatatttttctattgttttgttatgatgtttgtt 30072747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 447
Target Start/End: Original strand, 25368083 - 25368323
Alignment:
Q  201 tttcactctcttaaac-tctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtca 299  Q
    |||||||||||||| | | || ||||| ||||| || |||||||||||  |||| ||||||||||||||| |||||| | | | || ||| |||| ||||    
T  25368083 tttcactctcttaaccctgtacgtaatcatgcactataaatagagaccattgcacactattttattcatttagaaagttggcgttacaagacaagagtca 25368182  T
Q  300 agcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    ||||||  | |||||| | || ||   ||| |||||  |||||  ||||||| |||| ||||||| || |||||  ||||||   ||| ||||| | |||    
T  25368183 agcatcagagcttcaaaggaaggg--tttcttcctc--cttttattctctagagtatctttttcttttcttttgctatgatg---gttaccatgagtaac 25368275  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    |||| ||||  ||||||||||||| | |||||||||  ||||||||||    
T  25368276 taaacctctgagattagggttctaagttgaacctctatttatttgttg 25368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 25681109 - 25681146
Alignment:
Q  267 attcagaaagctagtggtagaaggcaagggtcaagcat 304  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  25681109 attcagaaagctagtggttcaaggcaagggtcaagcat 25681146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 201 - 451
Target Start/End: Original strand, 29437867 - 29438118
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | ||||||||| ||||| || |||||||||| | |||| ||| || |||||||||||||| ||||||||| ||||||||||||||    
T  29437867 tttcactctcttaacccctaagtaatcatgcactataaatagagactcttgcacactcttgtattcattcagaaaactagtggtacaaggcaagggtcaa 29437966  T
Q  301 gcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    ||||    | ||||||||    |||||| |||| |  |||| || ||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  29437967 gcattaagagcttcaaggacgaggatctccatcattctcttgttatctctagggtatgtttttctattgttttgtaatgatgtcggtttccatgagcaac 29438066  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| ||||||||||||||||| || |||||||  |||||||||||||||||    
T  29438067 taaacctctttgattagggttccacaatgaaccctttcttatttgttggatt 29438118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 201 - 450
Target Start/End: Original strand, 19602221 - 19602471
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | | ||||||| |||||||| |||||||||||| || | ||| |||| ||||||||||||||||| |||| |||||||||| |||    
T  19602221 tttcactctcttaaccccgaagtaatcatgcattataaatagagacccttgtacactctttttttcattcagaaagctagcggtacaaggcaagggccaa 19602320  T
Q  301 gcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    ||||| | | ||||||||||  |||| |  ||| || | || || |||| |||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  19602321 gcatcaggagcttcaaggcagaggatttctatcatccttttgttatctcgagggtatgtttttctattgttttgtaatgatgtcggttgccatgagcaac 19602420  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggat 450  Q
    ||||  |||||||||||||||| | |||||||| ||||| |||||||||||    
T  19602421 taaacttctttgattagggttccatgatgaaccccttctcatttgttggat 19602471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 5676763 - 5676887
Alignment:
Q  327 ttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacga 426  Q
    ||||||||| |||| |||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||    
T  5676763 ttcatcctcctcttgttctttctatggtatgtttttctattgttttgtaatgatgtatgttgctatgtgcaactgaacctctttgattagggttctaaga 5676862  T
Q  427 tgaacctcttcttatttgttggatt 451  Q
     ||||||||| |||||| |||||||    
T  5676863 agaacctcttattattttttggatt 5676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 459
Target Start/End: Original strand, 26188284 - 26188455
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||||||| ||||||||||  |  | |||||||  |||||||||||||| |||| |||||| ||||||||||||| |||||||||||| | |||||||||    
T  26188284 aaggcaagagtcaagcatcagagttccaaggcagaggatcttcatcctcctcttgttctctatagggtatgtttt-ctattgttttgttacgatgtatgt 26188382  T
Q  387 tgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    || ||||| |||||||| ||||||||||||||||||| |||||||  |||||||||||||||||  |||||||    
T  26188383 tgtcatgtacaactaaacctctttgattagggttctaagatgaactccttcttatttgttggataccattaat 26188455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 237 - 451
Target Start/End: Original strand, 4733185 - 4733399
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    ||||||| |||| || | ||| ||||||||| ||||||||||| | ||| ||| |||||||||| | |   | ||||||||||   ||||| ||||||||    
T  4733185 aaatagaaacccttggacactgttttattcaatcagaaagctactagtacaagacaagggtcaaacgttagagcttcaaggcagatgatctccatcctct 4733284  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    | || |||| |||| |||||||||||||||||||||||||| |  | |||||||||||||||||||| ||||||||||||||| | ||||||||   |||    
T  4733285 tgttgttctttctaaggtatgtttttctattgttttgtaataagctttgttgccatgtgcaactaaacctctttgattagggtcccacgatgaattactt 4733384  T
Q  437 cttatttgttggatt 451  Q
    |||||||||||||||    
T  4733385 cttatttgttggatt 4733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 290 - 451
Target Start/End: Original strand, 10576993 - 10577155
Alignment:
Q  290 gcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgc 389  Q
    ||||||||||||||||  | ||| |||| |  |||||| | ||||| |||| | ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  10576993 gcaagggtcaagcatcagagcttgaaggaagaggatctccctcctcctcttgtcctctctagggtatgtttttatattgttttgtaatgatgtttgttgc 10577092  T
Q  390 catgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||| |||||||| |||| |||| |||||||| | |||||||||||||||||||||||||||    
T  10577093 catgtccaactaaacctctattgactagggttccatgatgaacctcttcttatttgttggatt 10577155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 446
Target Start/End: Original strand, 33519513 - 33519722
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    ||||| |||||| |||| ||| ||||||||||||||||| ||||  ||| |||||||||||||| ||||  | |||||||||||  ||| |  ||| ||     
T  33519513 aaataaagacccttgcacactcttttattcattcagaaatctagcagtataaggcaagggtcaaacatcagagcttcaaggcaaaagatatctatcatcc 33519612  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    | || |||||||| |||||| |||||||||||| || |||||||||  |||||||| || ||||||| ||||||||||||||||  ||| |||||| |||    
T  33519613 ttttgttctctcttgggtatatttttctattgtcttataatgatgtcggttgccatatgtaactaaacctctttgattagggtttcacgttgaacccctt 33519712  T
Q  437 cttatttgtt 446  Q
    ||||||||||    
T  33519713 cttatttgtt 33519722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 9782627 - 9782511
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||  |||| ||||||||| ||| ||||||||||||| |||||||||| ||||||||    
T  9782627 ttctttctagggtatatttgtctattgttttgttatgatgtatgtttgcatgagcaactaaacctc-ttgattagggttccacgatgaaccccttcttat 9782529  T
Q  442 ttgttggatttcattaat 459  Q
    |||||||| || ||||||    
T  9782528 ttgttggaatttattaat 9782511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 31859546 - 31859314
Alignment:
Q  207 tctcttaaactctaagtaataatgca-ttacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc 305  Q
    |||||||| | ||||||||| ||||| ||| || ||||||||| |||| ||| ||||||||||||||||| ||||  ||| |||||| ||||||| |||     
T  31859546 tctcttaacccctaagtaatgatgcacttataagtagagacccttgcacactcttttattcattcagaaaactagatgtacaaggcaggggtcaaacat- 31859448  T
Q  306 gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaac 405  Q
                ||  |||| ||||||||| |||| |||||   ||||||||| ||||||||||||||||||||| |  |||| |||||||||||||| |    
T  31859447 ------------cagaggattttcatcctcctcttgttctcatcagggtatgtctttctattgttttgtaatgatattggttgtcatgtgcaactaaacc 31859360  T
Q  406 tctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||| ||||| ||||| |||| ||| |||||| |||||||    
T  31859359 tctttgattaaggttccacgataaaccccttattattttttggatt 31859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 447
Target Start/End: Complemental strand, 1695436 - 1695327
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||| ||||||||||||||||||||||||| | ||||| ||||| ||||  |||||||| ||| ||||||||||||| | |||||||| |||    
T  1695436 tcttgttctctcgagggtatgtttttctattgttttgtcacgatgtttgttgtcatgaccaactaaacctc-ttgattagggttccatgatgaacccctt 1695338  T
Q  437 cttatttgttg 447  Q
    |||||||||||    
T  1695337 cttatttgttg 1695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 447
Target Start/End: Original strand, 22120145 - 22120355
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    |||||||||||| |||| ||   |||||||||||||||  ||||  ||| |||||||||||||||||||  | || |||||||   ||||| |||||||     
T  22120145 aaatagagacccttgcacacacatttattcattcagaatactagctgtacaaggcaagggtcaagcatcatagctccaaggcatatgatctacatcctcc 22120244  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    | || || ||  |||||||||||||| |||| ||||| ||||||||  ||| |||||  |||||||  || |||||||||||||  |||||||||  |||    
T  22120245 ttttgttatcgttagggtatgtttttatattattttgcaatgatgtcagtttccatgaacaactaagcctatttgattagggtttcacgatgaacacctt 22120344  T
Q  437 cttatttgttg 447  Q
    |||||||||||    
T  22120345 cttatttgttg 22120355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 18444772 - 18444899
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| |||| |||||  |||||||||||||| | ||||||||||||||||| || ||||||| |||| ||||  ||||||||||||||||    
T  18444772 ggatctccatcctcctcttgttctcattagggtatgtttttatgttgttttgtaatgatgt-tggtgccatgagcaaataaacatctttgattagggttc 18444870  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     |||||||| | |||||||||| |||||||    
T  18444871 cacgatgaaac-cttcttattttttggatt 18444899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 382
Target Start/End: Original strand, 13066212 - 13066359
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc--gcaacttcaaggcaatggatcttcatcct 334  Q
    |||||||||| | ||| ||||||||||||||||||||||| ||| |||| |||||||| |||||  |||  | | ||||||||||  |||||| ||||||    
T  13066212 aaatagagactcttgcgtactattttattcattcagaaagttagcggtataaggcaagagtcaaatatcaaggatcttcaaggcataggatctccatcct 13066311  T
Q  335 cttctttttctctctagggtatgtttttctattgttttgtaatgatgt 382  Q
    | | || |||| ||||||||||||||||||| | ||||||| ||||||    
T  13066312 cgttttgttctttctagggtatgtttttctaatattttgtattgatgt 13066359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 451
Target Start/End: Complemental strand, 7023752 - 7023645
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    ||||||| |||||||||| | |||||||||||||| ||  ||| ||||||||||||||| |||| ||||||| ||||| | ||||||||  |||||||||    
T  7023752 tctctagtgtatgtttttatgttgttttgtaatgacgtcggtttccatgtgcaactaaacctctcttgattatggttccatgatgaacccattcttattt 7023653  T
Q  444 gttggatt 451  Q
    ||||||||    
T  7023652 gttggatt 7023645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 451
Target Start/End: Original strand, 9288538 - 9288620
Alignment:
Q  369 ttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||| ||||  ||| |||||||||| ||||||||||| |||||||| ||||||| ||| ||||||||||||||    
T  9288538 ttttgtaatgatgtttgttcacatatgcaactaaacctctttgattatggttctacaatgaaccccttattatttgttggatt 9288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 420
Target Start/End: Original strand, 21047790 - 21047852
Alignment:
Q  358 tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  21047790 tttttttattgttttgtaatgatgttggttgccatgtgcaactaaacctctttgattagggtt 21047852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 451
Target Start/End: Complemental strand, 39134305 - 39134207
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||||||| ||||||||| || || ||||||||| |||| |||||||||||  |||  ||||||||||  ||||||||||| |||||    
T  39134305 gtatgtttttctattgttttataatgatgtttgatgtcatgtgcaaataaacctctttgattaaagtttcacgatgaaccatttcttatttgtaggatt 39134207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 47024284 - 47024163
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||| ||||| ||||||||||||||||| ||||||| ||||| |||| || || ||| ||| || |||||||||| | |||||| |||||    
T  47024284 tcttgttctctctaaggtatatttttctattgttttgttatgatgtttgttgtcatgagctacgaaacctc-ttaattagggttccaagatgaatctctt 47024186  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||| ||| | ||||||    
T  47024185 cttatttgtttgatattattaat 47024163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 10451008 - 10450892
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||| || |||||||||||| ||||  | ||||| ||||||| ||||  |||||||| ||||| ||||||||||||| |||||||| ||| ||||    
T  10451008 ttctctctaaggcatgtttttctatggtttcattatgatttatgttgtcatgaacaactaaacctctt-gattagggttctatgatgaaccccttattat 10450910  T
Q  442 ttgttggatttcattaat 459  Q
    ||||||||| | ||||||    
T  10450909 ttgttggatattattaat 10450892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 27303311 - 27303425
Alignment:
Q  343 tctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatt 442  Q
    |||||||| ||||||||||||||| ||||| | ||||| |   || ||||| ||||||||| ||| ||||||||||||| |||||||||| |||||||||    
T  27303311 tctctctatggtatgtttttctatagtttttttatgatatcgatttccatgagcaactaaacctc-ttgattagggttccacgatgaacc-cttcttatt 27303408  T
Q  443 tgttggatttcattaat 459  Q
    ||||||| || ||||||    
T  27303409 tgttggaatttattaat 27303425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 33519238 - 33519338
Alignment:
Q  17 tcttagaagacaatataaggtaaagagagttcatttaaattttcaagacatttccagacagaagaacgtttgaaaaatggtcgaaaattacaaaattcgc 116  Q
    |||| |||||||||| ||| | |||| | ||||||| || || |||| |||||||||||||||||||| ||||||||||| |||||||| |||| |||||    
T  33519238 tctttgaagacaatacaagttgaagaaaattcatttcaaattccaaggcatttccagacagaagaacgcttgaaaaatggacgaaaattgcaaatttcgc 33519337  T
Q  117 a 117  Q
    |    
T  33519338 a 33519338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 460
Target Start/End: Complemental strand, 12806485 - 12806368
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| | ||| |||| |||||| |||||  | ||||||||| | || ||||||| |||| |||    
T  12806485 ttctctctaggatatatttttctattgttttgttatgatgtttattgtcatgagcaact-aaacttctggattagggtcccacaatgaaccccttcgtat 12806387  T
Q  442 ttgttggatttcattaatt 460  Q
    ||||||||| | |||||||    
T  12806386 ttgttggatattattaatt 12806368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 15192809 - 15192929
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||| ||||| ||||||||||||||||||| ||||||||||||| || | | ||||||| || |||||||||||||  | | |||||| |||    
T  15192809 tcttgttctctccagggtgtgtttttctattgttttgttatgatgtatgttgtcaagagaaactaaacct-tttgattagggtttcaag-tgaacccctt 15192906  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||| ||| | ||||||    
T  15192907 cttatttgtttgatcttattaat 15192929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 451
Target Start/End: Complemental strand, 17332187 - 17332065
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttct-attgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatg 428  Q
    ||||| |||| |||||||||||| || ||||| | ||||||||||||  ||||  ||| ||||||| ||||||| |||| ||||||||||||| | ||||    
T  17332187 tcctcctcttgttctctctagggaatattttttttattgttttgtaactatgtcagttaccatgtgtaactaaacctctcttgattagggttccatgatg 17332088  T
Q  429 aacctcttcttatttgttggatt 451  Q
    ||||||| ||||||| |||||||    
T  17332087 aacctctacttatttcttggatt 17332065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 18898579 - 18898692
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttg 444  Q
    |||||| | ||||||||||||||||||||| ||||||||||||| |||  ||||||| |  || ||||||| ||||| | |||||||| |||||||||||    
T  18898579 tctctaagttatgtttttctattgttttgttatgatgtatgttgtcataagcaactagacatc-ttgattatggttccaagatgaaccccttcttatttg 18898677  T
Q  445 ttggatttcattaat 459  Q
    || ||| | ||||||    
T  18898678 tttgatattattaat 18898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 443
Target Start/End: Complemental strand, 17024507 - 17024355
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||||||||||||||||||| | || ||||||||  ||| ||| || |  |||| |||||||||||  |||||||||||| | ||| | ||||||| |||    
T  17024507 aaggcaagggtcaagcatcggagctccaaggcaa--gat-ttcttctttctcttgttctctctaggaaatgtttttctatagctttattatgatgtttgt 17024411  T
Q  387 tgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttattt 443  Q
    | ||||| ||||||||| |||||| |||||||||| | ||||||||  |||||||||    
T  17024410 ttccatgagcaactaaacctcttt-attagggttccatgatgaaccctttcttattt 17024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 29437658 - 29437755
Alignment:
Q  6 agttcaatggttcttagaagacaatataaggtaaagagagttcatttaaattttcaagacatttccagacagaagaacgtttgaaaaatggtcgaaaa 103  Q
    |||||||||||||||||||||||||| || || |||| | ||||||| || || |||| |||  | ||||||||||||| ||||||||||||| ||||    
T  29437658 agttcaatggttcttagaagacaatacaaagtgaagaaacttcatttgaagttccaaggcatcgcaagacagaagaacgcttgaaaaatggtcaaaaa 29437755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 342 - 449
Target Start/End: Complemental strand, 25314770 - 25314665
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| |||||||||||||||||||||||||| | ||||||| |||| |||   ||||||||| |||| | |||||||||| |||||||  | ||||| ||    
T  25314770 ttctgtctagggtatgtttttctattgttttcttatgatgtttgttaccacaagcaactaaacctctctaattagggttccacgatga--cccttctaat 25314673  T
Q  442 ttgttgga 449  Q
    ||||||||    
T  25314672 ttgttgga 25314665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 17184150 - 17184091
Alignment:
Q  344 ctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaa 403  Q
    |||||| |||||||||||||||||||||| |||||||||  ||||||||| |||||||||    
T  17184150 ctctctcgggtatgtttttctattgttttctaatgatgttggttgccatgagcaactaaa 17184091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 459
Target Start/End: Complemental strand, 24041867 - 24041816
Alignment:
Q  408 tttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  24041867 tttgattagggttctatgatgaacctctttttatttgttggaattcattaat 24041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 449
Target Start/End: Original strand, 51885213 - 51885319
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||| |||||||||||||||| ||||||| | ||||||   |||| ||||  |||||||| ||| ||||||||| ||| |||||||||| ||||||||    
T  51885213 ttctctgtagggtatgtttttcttttgttttcttatgatgccagttgtcatgaacaactaaacctc-ttgattaggtttccacgatgaaccccttcttat 51885311  T
Q  442 ttgttgga 449  Q
    || |||||    
T  51885312 ttattgga 51885319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 352
Target Start/End: Original strand, 26160277 - 26160410
Alignment:
Q  219 taagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggc 318  Q
    |||||||| ||||  || |||||||||| | |||| ||| |||||||||||||||||||||| |||| ||| ||||| || |||||   | ||||||| |    
T  26160277 taagtaattatgccctataaatagagactcttgcacactcttttattcattcagaaagctagcggtacaagacaaggatctagcataagagcttcaagtc 26160376  T
Q  319 aatggatcttcatcctcttctttttctctctagg 352  Q
    |   ||||| ||||||| |||| |||||||||||    
T  26160377 agatgatctacatcctcctcttgttctctctagg 26160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 451
Target Start/End: Original strand, 24576922 - 24577029
Alignment:
Q  341 tttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttctta 440  Q
    |||||||||||||||||||| |||||| |||||||||||  |  |||| |||| |||| |||| |||||| | |||||||| ||||| ||||    ||||    
T  24576922 tttctctctagggtatgtttctctattattttgtaatgacatcggttgtcatgagcaattaaacctctttaactagggttccacgataaacc---cctta 24577018  T
Q  441 tttgttggatt 451  Q
    |||||||||||    
T  24577019 tttgttggatt 24577029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 22219294 - 22219400
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||| ||| | |  || ||||||||||||  ||| ||||| ||| ||||||||||||| | |||||||| |||||||||||||||||     
T  22219294 gtatgtttttctattgcttttttactatttatgttgccatgaacaaataaaaatctcttgattagggttccaagatgaacc-cttcttatttgttggata 22219392  T
Q  452 tcattaat 459  Q
    | ||||||    
T  22219393 ttattaat 22219400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 433
Target Start/End: Original strand, 32022266 - 32022436
Alignment:
Q  264 ttcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaac-ttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttttt 362  Q
    |||||||||||| ||||   || |||||||||||||| ||||  | | ||||||||| | ||| || |||||| |||| |||||| |||| |||||| ||    
T  32022266 ttcattcagaaaactagcaatacaaggcaagggtcaaacatcaaagccttcaaggcagttgatttt-atcctcatcttgttctctttaggatatgttctt 32022364  T
Q  363 ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacct 433  Q
     | |||||||||||||||||  ||| ||||||| || |||| | || |||||||| |||| |||||||||||    
T  32022365 atgttgttttgtaatgatgtcggttaccatgtgtaattaaaccactcttgattagagttccacgatgaacct 32022436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 451
Target Start/End: Original strand, 34667288 - 34667386
Alignment:
Q  354 tatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||| ||||||||||| |||||  | ||||||| |||| ||||  | | ||||| ||||||| | ||||||||||| |||||||||||||||    
T  34667288 tatgtttttcttttgttttgtaacgatgttggatgccatgagcaaataaacttgtcttgatcagggttccaagatgaacctctccttatttgttggatt 34667386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 451
Target Start/End: Complemental strand, 12110867 - 12110748
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttt-tgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatga 429  Q
    |||||||||| |||||| |||||||| |||||||||| | | ||| ||||||| |||||||| | | ||||||| |||||| || ||||||| | |||||    
T  12110867 tcctcttcttgttctctatagggtat-tttttctattttatgtgttatgatgtttgttgccacgagtaactaaacctcttt-atcagggttccaagatga 12110770  T
Q  430 acctcttcttatttgttggatt 451  Q
    ||| |  |||||||||||||||    
T  12110769 accccaacttatttgttggatt 12110748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 452
Target Start/End: Complemental strand, 10079689 - 10079586
Alignment:
Q  350 agggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttg-attagggttctacgatgaacctcttcttatttgttgg 448  Q
    |||||||| |||| |||||||||||||  ||||  ||| ||||| | ||||||| ||||||  ||||||||||   ||||||||||| |||||| |||||    
T  10079689 agggtatgcttttatattgttttgtaacaatgtcggttaccatgcgtaactaaacctcttttcattagggttcctagatgaacctctacttattggttgg 10079590  T
Q  449 attt 452  Q
    ||||    
T  10079589 attt 10079586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 451
Target Start/End: Complemental strand, 16441744 - 16441637
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    ||||||| |||||||||||| ||  |||||||| |||| | || ||||||| ||||||| |  | ||||||||||||| |||| | ||||||  ||||||    
T  16441744 tctctagagtatgtttttcttttcgtttgtaataatgtctattaccatgtgtaactaaaccaatattgattagggttccacgaaggacctctatttattt 16441645  T
Q  444 gttggatt 451  Q
    ||||||||    
T  16441644 gttggatt 16441637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 346
Target Start/End: Original strand, 23354039 - 23354178
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||| |||| ||||| |||| |  ||| ||| ||||||||||||||||||| |   ||| ||||||| |||||| ||||     
T  23354039 tctcttaacccctaagtaatgatgtattataaataaagactctcgcaaactcttttattcattcagaaagccaacagtacaaggcaaaggtcaaacatca 23354138  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctc 346  Q
     | |||||| |||  |||||| ||||||| |||| |||||    
T  23354139 gagcttcaaagcagaggatctccatcctcatcttgttctc 23354178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 20985120 - 20985035
Alignment:
Q  363 ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgg 448  Q
    |||||||||||||||||||   ||||  ||| | |||| || || |||||||||||||| | |||||| | |||||||||||||||    
T  20985120 ctattgttttgtaatgatgccggttgttatgagtaactgaacctatttgattagggttccatgatgaatcccttcttatttgttgg 20985035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 340
Target Start/End: Original strand, 21077722 - 21077855
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||  | || |||||||||||| ||   ||||| ||||||||||| |||||||| | || |||| ||||||||| ||||     
T  21077722 tctcttaacccctaagtaatgatctactataaatagagacccttgtccactatcttattcattcaaaaagctagcgatacaaggtaagggtcaatcatca 21077821  T
Q  307 caacttcaaggcaatggatcttcatcctcttctt 340  Q
     | ||||||| ||  |||||| ||| ||||||||    
T  21077822 gagcttcaagacataggatctccatgctcttctt 21077855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 218 - 459
Target Start/End: Original strand, 11475319 - 11475560
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||| | || |||||||||| | |||| ||| |||||||||||||||||||||| |||  ||||||||| |||||||||  | ||||||||    
T  11475319 ctaagtaatgatgtaatataaatagagactcttgcacactcttttattcattcagaaagctagcggtgcaaggcaaggatcaagcatcaaagcttcaagg 11475418  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagg 417  Q
     || ||||||| |||||   ||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||| | ||||||    
T  11475419 taaaggatctttatccttaccttgttctctctaaggtatgtttttatattgttttgtaatgatatatgttgccatctgcaactaaacctctctaattagg 11475518  T
Q  418 gttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||| |||||||||| ||| |||||| ||| ||| |||||||    
T  11475519 gttccacgatgaaccccttgttattttttgtattccattaat 11475560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 443
Target Start/End: Complemental strand, 21828853 - 21828626
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||| | || |||||||||||| || | | |  ||||||||||||||||||||| || | || |||||||||||||||   | ||||||||    
T  21828853 ctaagtaatgatgaactataaatagagacccttgtacattcatttattcattcagaaagctagcggcacaatgcaagggtcaagcataagagcttcaagg 21828754  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgttttt--ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgatta 415  Q
    ||| |||||| |||| || |||| |||||||||||| || |||||  ||||||||| ||||||||||  ||||||||||||||||||| ||||||||| |    
T  21828753 caaaggatctccatcttcctcttgttctctctagggaatttttttttctattgtttggtaatgatgtcagttgccatgtgcaactaaacctctttgatca 21828654  T
Q  416 gggttctacgatgaacctcttcttattt 443  Q
     ||||| | |||||||||||||||||||    
T  21828653 aggttccatgatgaacctcttcttattt 21828626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 201 - 451
Target Start/End: Original strand, 26298223 - 26298473
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||| ||||||||| | ||||| ||| |||||||| |||||||||| | |||| ||| ||||||| ||| |||||||||||| || ||| ||||||||||    
T  26298223 tttccctctcttaacccctaaggaatcatgcattataaatagagactcttgcacactcttttattaattgagaaagctagtgctacaagtcaagggtcaa 26298322  T
Q  301 gcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    |||||   | |||||||| |  |||||||||||||| |||| || |||||   ||||||| ||||||||||||||||||||||  |||||||||   |||    
T  26298323 gcatcatgagcttcaaggaagaggatcttcatcctcctcttgttgtctctcaagtatgttattctattgttttgtaatgatgttggttgccatg-ataac 26298421  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
     |||  |||||||||||||||| |||||| ||| |||| |||||||||||||    
T  26298422 aaaatatctttgattagggttccacgatgtaccccttcatatttgttggatt 26298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 8401952 - 8401823
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||||||||||| |||| || |||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||  | ||| ||||||||||    
T  8401952 ggatcttcatcctcctcttgttatctctagggtatgtttttatattgttttgtaataatgtcggttgccatgtgcaactaaactttttttattagggttc 8401853  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     |||||||||| ||||||||||||||||||    
T  8401852 cacgatgaaccccttcttatttgttggatt 8401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 14280837 - 14280708
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||  ||||||||  ||||||||| ||||||||||| |||||    
T  14280837 ggatctacatcctcctcttgttctctctagggtatgtttttctattgctttgtaatggtgtcggttgccataagcaactaaacctctttgattaaggttc 14280738  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     |||||||||| ||||||||||||||||||    
T  14280737 cacgatgaaccccttcttatttgttggatt 14280708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 228 - 451
Target Start/End: Original strand, 26419223 - 26419446
Alignment:
Q  228 atgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatct 327  Q
    ||||| || |||||||||||| |  | |||||| ||||||||||||||| ||| |||| | |  | || ||| |||||  | |||||||| || ||||||    
T  26419223 atgcactataaatagagacccttttacactattatattcattcagaaagatagcggtacatga-atggttcaggcatcagagcttcaaggtaaaggatct 26419321  T
Q  328 tcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttg-attagggttctacga 426  Q
    |||| ||| |||| || ||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||| |||| ||||| ||||    
T  26419322 tcattctcctcttgttttcattagggtatgtttttctattgttttgtaatgatgttggttgccatgtgcaactaaacatctttgtattacggttccacga 26419421  T
Q  427 tgaacctcttcttatttgttggatt 451  Q
    |||||| ||||||||||||||||||    
T  26419422 tgaaccccttcttatttgttggatt 26419446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 261 - 459
Target Start/End: Complemental strand, 19218802 - 19218604
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatg-tt 359  Q
    ||||||||| | |||||||  |||  ||| |||||||||||||||  |  |||||||||  | |||| ||||||| |||| |||||||||| ||||  ||    
T  19218802 ttattcattaataaagctaacggttcaagacaagggtcaagcatcagag-ttcaaggcagagtatctccatcctcctcttgttctctctagagtatcctt 19218704  T
Q  360 tttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||||||||||| |||| |||||||| |||||||||||||| |||||||||||||||||||  ||||| || ||||||||||||||||| |||||||    
T  19218703 tttctattgttttgttatgaagtatgttgtcatgtgcaactaaacctctttgattagggttctaacatgaagcttttcttatttgttggattccattaat 19218604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 222 - 432
Target Start/End: Original strand, 18474669 - 18474880
Alignment:
Q  222 gtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaaggcaa 320  Q
    ||||| || ||||| ||||||||||  ||| | ||| ||| |||||||| ||||||||| |||| ||||||||||||||||||| | |  |||||||||     
T  18474669 gtaatcatccattataaatagagacaaatgaacactctttcattcattctgaaagctagaggtacaaggcaagggtcaagcatcaggagtttcaaggcag 18474768  T
Q  321 tggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
     | |||| ||||||| |||| ||||||| ||||| | ||||||||||| ||||||||||||| ||||   ||| ||||||||| ||||||||||| ||||    
T  18474769 agtatctccatcctcctcttattctctccagggtttatttttctattggtttgtaatgatgtctgtttttatgagcaactaaacctctttgattatggtt 18474868  T
Q  421 ctacgatgaacc 432  Q
    | ||||||||||    
T  18474869 ccacgatgaacc 18474880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 451
Target Start/End: Complemental strand, 19542734 - 19542510
Alignment:
Q  228 atgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttc-aaggcaatggatc 326  Q
    |||||||| |||||||||| |||| | ||| ||| |||||||| ||||||| | |||| ||||||||||||||||||   || ||  ||||||  | |||    
T  19542734 atgcattataaatagagacacatgaacactctttcattcattctgaaagcttgaggtacaaggcaagggtcaagcattataagttttaaggcagagtatc 19542635  T
Q  327 ttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacga 426  Q
    | ||||||| |||| ||||||||||||||| |||||||| |  ||| ||||||||| ||||   |||  |||||||| ||||||||||||||||| ||||    
T  19542634 tccatcctcctcttgttctctctagggtatatttttctactagtttataatgatgtttgtttttatgaacaactaaatctctttgattagggttccacga 19542535  T
Q  427 tgaacctcttcttatttgttggatt 451  Q
    |||||| ||| || |||||||||||    
T  19542534 tgaaccccttattttttgttggatt 19542510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 19263435 - 19263305
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatg-tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    ||||||||| |||| ||||||||||||||| ||||  |||||| |||||| ||| ||||||| | |||  ||||||||||| | ||||||||||||||||    
T  19263435 ggatcttcaccctcctctttttctctctagagtatcctttttccattgttctgttatgatgttttttgtaatgtgcaactacacctctttgattagggtt 19263336  T
Q  421 ctacgatgaacctcttcttatttgttggatt 451  Q
    ||| |||||||||||||||||||||||||||    
T  19263335 ctaagatgaacctcttcttatttgttggatt 19263305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 329 - 448
Target Start/End: Original strand, 10342330 - 10342449
Alignment:
Q  329 catcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatg 428  Q
    ||||||| |||| ||||||||||||||| |||||||||| |||||| ||||||||||||| |||| | ||||| | ||||||| ||||||||||| ||||    
T  10342330 catcctcctcttgttctctctagggtatatttttctattattttgttatgatgtatgttgtcatgagaaactacacctctttggttagggttctaagatg 10342429  T
Q  429 aacctcttcttatttgttgg 448  Q
    |||  |||||||||||||||    
T  10342430 aacaccttcttatttgttgg 10342449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 28731142 - 28731053
Alignment:
Q  354 tatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttattt 443  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||  ||||||||| ||||||||||    
T  28731142 tatgtttttctattgttttgtaatgatgtatgttgtcatgtgtagctaaacctctttgattagggttccgcgatgaaccccttcttattt 28731053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 261 - 451
Target Start/End: Complemental strand, 2729200 - 2729014
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggca-atggatcttcatcctcttctttttctctctagggtatgtt 359  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||  |  |  |||||| |||| ||||||||||| |||| ||||||||| ||||| ||    
T  2729200 ttattcattcagaaagctagaggttcaaggtaagggtcaagcatcagagttcaaaggcagatgg-tcttcatcctcatcttgttctctctatggtatatt 2729102  T
Q  360 tttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||| |||||||| |||    |||||||||||  |||||||| |||||||||||||||| || |||||||  | | ||||||||||||||    
T  2729101 tttctactgttttgttatg----atgttgccatgaacaactaaacctctttgattagggttataagatgaactccattttatttgttggatt 2729014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 331 - 451
Target Start/End: Original strand, 27415694 - 27415813
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| |||||||| |||||| ||||||||||||||||| ||| ||||| |||||||| | ||||||| | ||| ||||| ||||||| ||||||    
T  27415694 tcctcctcttgttctctctggggtatctttttctattgttttgttatggtgtatattgccatgagtaactaaaccgcttcgatta-ggttctaagatgaa 27415792  T
Q  431 cctcttcttatttgttggatt 451  Q
    || ||||||||||||||||||    
T  27415793 ccccttcttatttgttggatt 27415813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 412
Target Start/End: Original strand, 19285600 - 19285746
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||| | ||||||||||  ||||||||||||||  ||| || ||       ||||     
T  19285600 ttttattcattcagaaagctaatggtacaaggcaagggtcaaacatcggagcttcaaggcagaggatcttcatcctccgcttgttttc-------tatgc 19285692  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttga 412  Q
    |||| |||||||||||||||||||  || |||||||||||||| | ||||||||    
T  19285693 ttttatattgttttgtaatgatgtcagtagccatgtgcaactacacctctttga 19285746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 23907804 - 23907699
Alignment:
Q  355 atgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactcttt-gattagggttctacgatgaacctcttcttatttgttggatttc 453  Q
    |||| |||||||||||||||| ||||||   || ||||||| ||||||| |||||| ||||||||||| ||||||||| ||| ||||||||||||||||     
T  23907804 atgtgtttctattgttttgtattgatgtcgattaccatgtgtaactaaacctcttttgattagggttcaacgatgaacttctacttatttgttggattta 23907705  T
Q  454 attaat 459  Q
    ||||||    
T  23907704 attaat 23907699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 446
Target Start/End: Original strand, 25883651 - 25883747
Alignment:
Q  349 tagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgtt 446  Q
    |||||||||||||||||||||||||| |  ||||||||||||||| ||||||||| ||| || |||| | ||| |||||||||||||||| |||||||    
T  25883651 tagggtatgtttttctattgttttgttactatgtatgttgccatgagcaactaaacctc-ttaattatgattccacgatgaacctcttctcatttgtt 25883747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 324 - 449
Target Start/End: Original strand, 21806070 - 21806195
Alignment:
Q  324 atcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttcta 423  Q
    |||||||||||  || | || ||||||  |||||||||||||||||   |||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  21806070 atcttcatccttctcatgttttctctaaagtatgtttttctattgt---gtaatgatgtatgttgtcatgtgcaactaaacctctttggttagggttcta 21806166  T
Q  424 cgatgaacc---tcttcttatttgttgga 449  Q
     ||| ||||    ||||||||||||||||    
T  21806167 agattaacccggccttcttatttgttgga 21806195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 22488414 - 22488295
Alignment:
Q  324 atcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttcta 423  Q
    |||| ||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||  |||  |||| | |||||||  |||| ||||| ||||| |    
T  22488414 atctccatcctcctcttgttctctctaggatatgtttttcaattgttttgtaatgatgtcggttttcatgagaaactaaacttcttcgattatggttcca 22488315  T
Q  424 cgatgaacctcttcttattt 443  Q
    ||||||||  ||||||||||    
T  22488314 cgatgaactccttcttattt 22488295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 21653960 - 21654070
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttctta 440  Q
    |||||||||||| |||||||||| || |||||||||||||| |||  ||||||| ||||||| |||| |||||||||||||||  || |||||||  ||     
T  21653960 ttctctctagggcatgtttttctcttattttgtaatgatgtttgtaaccatgtgtaactaaacctctcttgattagggttctataataaacctctatttt 21654059  T
Q  441 tttgttggatt 451  Q
    |||||||||||    
T  21654060 tttgttggatt 21654070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 420
Target Start/End: Original strand, 18066245 - 18066334
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    ||||| |||| |||||| ||| |||| ||||||||||||||||| |||| |||| ||| |||| ||||||||| ||||||||||||||||    
T  18066245 tcctcctcttgttctctatagagtatctttttctattgttttgttatgacgtatattgtcatgagcaactaaacctctttgattagggtt 18066334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 5632125 - 5632033
Alignment:
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||||||||| |   || ||||| | |||||||  |||||||||||||||| ||||| ||||  |||||||||||||||||    
T  5632125 ttttctattgttttgtaatgatatcgatttccatgagaaactaaacttctttgattagggttccacgataaaccctttcttatttgttggatt 5632033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 16973214 - 16973278
Alignment:
Q  351 gggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgatta 415  Q
    ||||| ||||||||||||||| |||||| |||| |||||||| |||||||||| |||||||||||    
T  16973214 gggtacgtttttctattgtttcgtaatgttgtaggttgccatttgcaactaaacctctttgatta 16973278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 28731238 - 28731148
Alignment:
Q  295 ggtcaagcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||||||||||| || || |||||||| |||||| |||||| ||||| |||||||||   |||||||||||||||||||||||||||||||||    
T  28731238 ggtcaagcatcggaagctgcaaggcaa-ggatctccatccttttcttgttctctctaaa-tatgtttttctattgttttgtaatgatgtatgt 28731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 451
Target Start/End: Original strand, 33578358 - 33578457
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||| ||||||| ||||||||  ||| ||||||| | ||||| |||| ||||||||| ||| ||||||||||||| ||||||  |||||||    
T  33578358 gtatgtttttctactgttttgcaatgatgtcagttaccatgtgtagctaaacctctcttgattaggattccacgatgaacctctacttattcattggatt 33578457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 423
Target Start/End: Original strand, 21018176 - 21018268
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttcta 423  Q
    ||||| |||| |||| ||| || ||||||||||||||||| ||| ||||||| |||| |||||  || ||||| ||||||||||||| |||||    
T  21018176 tcctcctcttgttctgtctgggatatgtttttctattgttatgttatgatgtttgtttccatgaacagctaaacctctttgattaggtttcta 21018268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 458
Target Start/End: Complemental strand, 26387298 - 26387230
Alignment:
Q  390 catgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    |||||| ||||||| || ||| ||||||||||  | |||||||||||||||||||||||||| ||||||    
T  26387298 catgtgaaactaaacctttttcattagggttccgcaatgaacctcttcttatttgttggattccattaa 26387230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 11521775 - 11521881
Alignment:
Q  352 ggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||| ||||||||| | ||||||| |||||||||| ||||||||| ||| |||||||||| || | | |||||    |||||||||||||| |    
T  11521775 ggtatgtttttatattgtttttttatgatgtctgttgccatgagcaactaaacctc-ttgattagggatccatgttgaactcgatcttatttgttggaat 11521873  T
Q  452 tcattaat 459  Q
    | ||||||    
T  11521874 ttattaat 11521881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 13911874 - 13911930
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatg 393  Q
    |||| |||||| ||||||||| |||||||||||||||  |||||||||||| |||||    
T  13911874 tcttgttctctatagggtatggttttctattgttttgatatgatgtatgtttccatg 13911930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 446
Target Start/End: Complemental strand, 33914140 - 33914027
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| |||| | |||||||||||||| || |||||||| |  |||| |||||||| | ||||||||| ||| ||||||||| ||  | ||||||    
T  33914140 tcctcctcttgttctttttagggtatgtttttataatgttttgttacaatgtttgttgccacgagcaactaaacctc-ttgattaggctttcaagatgaa 33914042  T
Q  431 cctcttcttatttgtt 446  Q
    || |||||||||||||    
T  33914041 cc-cttcttatttgtt 33914027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 22489729 - 22489644
Alignment:
Q  219 taagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcat 304  Q
    |||||||| ||||| || |||||||||||  |||| |||||||||||||||   ||| |||| |||| ||| |||| |||||||||    
T  22489729 taagtaatcatgcactataaatagagaccattgcacactattttattcattttaaaatctagcggtacaagacaagagtcaagcat 22489644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 451
Target Start/End: Original strand, 16996477 - 16996521
Alignment:
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||    
T  16996477 ctttgattagggttctaaaatgaacctctatttatttgttggatt 16996521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 207 - 452
Target Start/End: Original strand, 5636657 - 5636904
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||||| || |||||||||||| |||| ||  ||||||||||||||||||||||| ||| ||||||| |||||||||||     
T  5636657 tctcttaatcactaagtaatgatgcactataaatagagacccttgcacacacttttattcattcagaaagctagtagtacaaggcaatggtcaagcatca 5636756  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc-tattgttttgtaatgatgtatgttgccatgtgcaactaaaac 405  Q
     | ||||||||||   ||||| || |||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| || |    
T  5636757 aagcttcaaggcagatgatctccaacctcctcttgttctctctagggtatttttttcttattgttttgtaatgatgtatgttgtcatgtgcaactcaacc 5636856  T
Q  406 tct-ttgattagggttctacgatgaacctcttcttatttgttggattt 452  Q
    ||| || |||||||||  | ||||||||  || |||||||||||||||    
T  5636857 tctctttattagggtttcaggatgaaccctttattatttgttggattt 5636904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 266 - 451
Target Start/End: Complemental strand, 5312383 - 5312197
Alignment:
Q  266 cattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttct 364  Q
    |||| ||||||||||||||| |||||||| ||||| |||  | |  ||||||| |   ||||| ||||||| |||| ||||||||||||||||||||||     
T  5312383 cattgagaaagctagtggtacaaggcaagagtcaaacataaggagtttcaaggtataagatctccatcctcctcttgttctctctagggtatgtttttca 5312284  T
Q  365 attgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||||||  |||| |||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||    
T  5312283 attgttttgtaatgatgtcggttgtcatgtgcaactaaacctctttgattaggattctacgatgaacccattcttatttgttggatt 5312197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 223 - 447
Target Start/End: Complemental strand, 24596643 - 24596418
Alignment:
Q  223 taataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaaggcaat 321  Q
    |||| |||||||| |||||||||||  |||| ||| ||||||||||||||||||||  ||||| ||||||||||||||||||| | | ||||||||||      
T  24596643 taatcatgcattataaatagagaccattgcacactcttttattcattcagaaagctgatggtacaaggcaagggtcaagcatcaggagcttcaaggcaga 24596544  T
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
     |||||  ||| || |||| |||||||||| |||||||||| ||||||||| |||||||||  ||||  ||| ||||| ||| |||||| ||||| ||||    
T  24596543 tgatctctatcatcctcttgttctctctagtgtatgtttttatattgttttataatgatgtcggttgttatgagcaaccaaacctctttaattagagttc 24596444  T
Q  422 tacgatgaacctcttcttatttgttg 447  Q
     ||||||||||  |||||||||||||    
T  24596443 cacgatgaacccattcttatttgttg 24596418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 261 - 432
Target Start/End: Complemental strand, 4092096 - 4091925
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaactt-caaggcaatggatcttcatcctcttctttttctctctagggtatgtt 359  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||  |  || |||||||  |||||| |||| || |||| ||||||||| ||||||||    
T  4092096 ttattcattcagaaagctagcggttgaaggcaagggtcaagcatcagaggttccaaggcagaggatctccatcttcctcttgttctctcta-ggtatgtt 4091998  T
Q  360 tttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacc 432  Q
    ||||||||||||||| || ||||||||||||||  ||||||||| |||||||||||||||||||  |||||||    
T  4091997 tttctattgttttgttataatgtatgttgccattagcaactaaacctctttgattagggttctaacatgaacc 4091925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 22334948 - 22334703
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||||| || ||||| ||| |  || | ||| ||||||| ||||||||||||||||||| |||||||||||||||||||     
T  22334948 tctcttaacccctaagtaatgatgcactataaataaagatcattgaacactcttttattaattcagaaagctagtggtacaaggcaagggtcaagcatca 22334849  T
Q  307 c-aacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc-tattgttttgtaatgatgtatgttgccatgtgcaactaaaa 404  Q
      |||||  |||||  |||||| ||| ||| ||||  ||| |||| | |||||||||| |||| |||||||| ||||||||||| ||||| |||| |||     
T  22334848 agaactttcaggcagaggatctccattctcctcttggtctttctaagatatgtttttcctatt-ttttgtaaagatgtatgttgtcatgtacaacaaaac 22334750  T
Q  405 ctctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  22334749 ctctttgattatggttccacgatgaaccccttcttctttgttggatt 22334703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 237 - 451
Target Start/End: Original strand, 18466990 - 18467205
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    |||||||||||  |||| ||||||||||||||| |||||||||  |||| ||| ||| ||||||| |||  | |||||||| |  |||| | | |||||     
T  18466990 aaatagagacctttgcacactattttattcattgagaaagctaacggtacaagacaaaggtcaagaatcatagcttcaaggtagaggatttccctcctcc 18467089  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctct 435  Q
    ||||  | || || |||||| |||||||||||||||||||||||||||||| ||||| |||| |||| |||| ||||||| ||||| ||||| |||| ||    
T  18467090 tcttgctttcactggggtatatttttctattgttttgtaatgatgtatgttaccatgcgcaattaaacctctcttgattatggttcaacgataaacccct 18467189  T
Q  436 tcttatttgttggatt 451  Q
    ||||||| ||||||||    
T  18467190 tcttattagttggatt 18467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 21545388 - 21545268
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||  ||||  ||||||||| |||| ||||||||||||| ||||| |||||||| |||    
T  21545388 tcttgttctctctagggtatgtttttatattgttttgttatgatgattgtt--catgtgcaagtaaacctctttgattaggcttctaagatgaacccctt 21545291  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||||||||| ||||||    
T  21545290 cttatttgttggatttaattaat 21545268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 345 - 451
Target Start/End: Original strand, 3400417 - 3400523
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttg 444  Q
    |||||||||||||||||| ||||||||||| ||||| | | |||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||||     
T  3400417 tctctagggtatgtttttatattgttttgttatgatttttattgccatgtgcaactaaacctctttgattaaggttctaagatgaaccccttcttatttc 3400516  T
Q  445 ttggatt 451  Q
    |||||||    
T  3400517 ttggatt 3400523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 459
Target Start/End: Original strand, 20446788 - 20446915
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||  ||||||||||||  || ||||     
T  20446788 tcctcttttttttctttccagggtatgtttttctattgttttgttatgatgtatgttgccatgagcaact-aaacttcttgattagggtttcacaatgag 20446886  T
Q  431 cctcttcttatttgttggatttcattaat 459  Q
    || |||||||||||||||| || ||||||    
T  20446887 ccgcttcttatttgttggaatttattaat 20446915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 459
Target Start/End: Complemental strand, 2630047 - 2629937
Alignment:
Q  348 ctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||||| ||||||||| ||| ||||||||||||| | |||||||| ||||||||||||||    
T  2630047 ctagggtatgtttttattttgttttgttatgatgtttgttgccatgagcaactaaacctc-ttgattagggttccatgatgaaccccttcttatttgttg 2629949  T
Q  448 gatttcattaat 459  Q
    || || ||||||    
T  2629948 gaatttattaat 2629937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 450
Target Start/End: Complemental strand, 9405376 - 9405280
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggat 450  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||| ||| || |||||||||| | |||||||| |||||||||||||||||    
T  9405376 gtatgattttctattgttttgttatgatgtatgttgccatgagcaactaaacctc-ttaattagggttccatgatgaaccccttcttatttgttggat 9405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 459
Target Start/End: Original strand, 23072921 - 23073022
Alignment:
Q  358 tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcatta 457  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||| || |||||||||||||||||||  |||||||  ||||||||||||||||| |||||    
T  23072921 tttttctattgttttataatgatgtttgttggcatgtgaaacttaacctctttgattagggttctaaaatgaaccatttcttatttgttggattccatta 23073020  T
Q  458 at 459  Q
    ||    
T  23073021 at 23073022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 20017492 - 20017676
Alignment:
Q  264 ttcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc 363  Q
    |||||||| |||| |||||||  |||||||||||||| |||   |  | |||||||  ||||||||||| || |||| |||||||| || ||||||||||    
T  20017492 ttcattcataaagttagtggttcaaggcaagggtcaaacattaaagttccaaggca--ggatcttcatcttcctcttgttctctcttggctatgtttttc 20017589  T
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||| ||| ||  |||| ||||| ||||||||| ||  ||||||||||||||| ||||||||  |||||||| ||||||||    
T  20017590 tattgttttgttatgttggttgttaccatgagcaactaaacct-attgattagggttctaagatgaaccctttcttattggttggatt 20017676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 451
Target Start/End: Original strand, 23126710 - 23126817
Alignment:
Q  343 tctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatt 442  Q
    |||||||||||| ||||||||||||||||||| ||||||| | |||||||| | ||||||  |||||||||||||| |||| |||||||| |||||||||    
T  23126710 tctctctagggtttgtttttctattgttttgttatgatgtttattgccatgagtaactaagcctctttgattaggg-tctaagatgaaccccttcttatt 23126808  T
Q  443 tgttggatt 451  Q
    | |||||||    
T  23126809 ttttggatt 23126817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 345 - 451
Target Start/End: Complemental strand, 11467605 - 11467499
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    |||||||||||||||||  ||||||||||||||||||||| |||  ||||||||||||| |||| ||||||| ||||| || ||| ||||||||||||||    
T  11467605 tctctagggtatgtttta-tattgttttgtaatgatgtattttgttatgtgcaactaaatctctcttgattaaggttccacaatggacctcttcttattt 11467507  T
Q  444 gttggatt 451  Q
    ||||||||    
T  11467506 gttggatt 11467499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 347 - 432
Target Start/End: Original strand, 315717 - 315801
Alignment:
Q  347 tctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacc 432  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  315717 tctatggtatgtttttctattgctttgttatgatgtatgttgccatgagcaactaaacctc-ttgattagggttccacgatgaacc 315801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 346 - 459
Target Start/End: Original strand, 7815898 - 7816010
Alignment:
Q  346 ctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgt 445  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||| |||||||| |||| | ||| |||| ||||||||||||    
T  7815898 ctctagggtatgtttttctattgttttcttgtgatgtatgttgccatgagcaactaaacctc-ttgattagcgttccaagataaaccccttcttatttgt 7815996  T
Q  446 tggatttcattaat 459  Q
    | || || ||||||    
T  7815997 tcgaatttattaat 7816010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 9760667 - 9760796
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| | || ||||||||| |||||||||||||||| ||||||||||||||  | | ||| | || |||||| |||||||| ||||| |     
T  9760667 ggatctccatcctcctattgttctctctaaggtatgtttttctattattttgtaatgatgtcagattccaggagcgactaaacctctttgagtagggctt 9760766  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     |||||||||| ||||||||||||||||||    
T  9760767 cacgatgaaccccttcttatttgttggatt 9760796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 21472367 - 21472483
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||| |||||||||||||||||||   |||||||||||||||||| ||| ||||| ||| |||| || ||||| |||||||||  ||||||||    
T  21472367 ttctctctaggatatgtttttctattgttttcatatgatgtatgttgccatgagcagctaaacctc-ttgaatatggttccacgatgaacaccttcttat 21472465  T
Q  442 ttgttggatttcattaat 459  Q
    |||||||| || ||||||    
T  21472466 ttgttggaatttattaat 21472483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 26839717 - 26839613
Alignment:
Q  354 tatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttc 453  Q
    ||||||||| ||||||||||| ||||| | |||||||||| ||||||||| ||| ||||||| ||||| | |||||||| |||||||||||||||||||     
T  26839717 tatgtttttatattgttttgttatgatatttgttgccatgagcaactaaacctc-ttgattaaggttccaagatgaaccccttcttatttgttggatttt 26839619  T
Q  454 attaat 459  Q
    ||||||    
T  26839618 attaat 26839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 7326510 - 7326396
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    |||||| |||||||||| || || |||||||||||||| |||||||||||| ||||||| |||| || |||||||||| ||||||||| | | |||||||    
T  7326510 tctctatggtatgtttt-ctcttattttgtaatgatgtttgttgccatgtgtaactaaacctctctttattagggttccacgatgaacatgtacttattt 7326412  T
Q  444 gttggatttcattaat 459  Q
    ||||||||| ||||||    
T  7326411 gttggatttaattaat 7326396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 20040345 - 20040243
Alignment:
Q  348 ctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||||||| | ||||||||| |||||||||||| ||||| |||| |||| ||| ||||||||||||| || ||||||| |||||||||||||     
T  20040345 ctagggtatgtttttattttgttttgttatgatgtatgtttccatgagcaaataaacctc-ttgattagggttcaactatgaaccccttcttatttgtta 20040247  T
Q  448 gatt 451  Q
    ||||    
T  20040246 gatt 20040243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 439
Target Start/End: Complemental strand, 7777625 - 7777524
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||| |||||  |||||||| |||| | |||||||| |||    
T  7777625 tcttgttctctctagggtatgtttttctattgttttattatgatgtttgttgccatgagcaact-aaacttcttgattagagttccaagatgaacccctt 7777527  T
Q  437 ctt 439  Q
    |||    
T  7777526 ctt 7777524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 365 - 451
Target Start/End: Original strand, 30406182 - 30406268
Alignment:
Q  365 attgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||||||  ||||||||  ||||||||| ||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  30406182 attgttttgtaatgatgttggttgccataagcaactaaacctctttgattatggttccacgatgaaccccttctcatttgttggatt 30406268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 7493865 - 7493969
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||  |||||||| ||| |||||||||  |  |||| ||||| ||||||||    
T  7493865 ttctctctagggtatgtttttctattgttattttatgatgtatgttgccatgaccaactaaacctc-ttgattaggaatacacgacgaaccccttcttat 7493963  T
Q  442 ttgttg 447  Q
    ||||||    
T  7493964 ttgttg 7493969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 4829273 - 4829377
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | ||||||| | || || ||  ||||||||| |||||| | ||||||||||||| |||||||||| |||| ||||||||||||||    
T  4829273 tttcactctcttaacccctaagtagtcatccactatgaatagagactcatgcacattattttattcatttagaaagctagcggtacaaggcaagggtcaa 4829372  T
Q  301 gcatc 305  Q
    |||||    
T  4829373 gcatc 4829377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 237 - 451
Target Start/End: Original strand, 9801022 - 9801237
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtag-aaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcatcct 334  Q
    |||||||||||  |||||||  ||| | ||||||| ||| |||| ||| | |||||||||||||||||||   | ||| |||| |  |||||| ||||||    
T  9801022 aaatagagaccgttgcatacactttaactcattcaaaaaactagcggtggcaaggcaagggtcaagcatcaagagctttaaggaagaggatctccatcct 9801121  T
Q  335 cttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctc 434  Q
    | |||| ||||||||||||| |||||||| ||| ||||||||||||||  ||| ||||| || ||| || |||||||| ||| | |  |||||||||| |    
T  9801122 cctcttgttctctctagggtgtgtttttcaattattttgtaatgatgtccgtttccatgagcgacttaacctctttgagtagagcttcacgatgaacccc 9801221  T
Q  435 ttcttatttgttggatt 451  Q
    |||||| ||||||||||    
T  9801222 ttctta-ttgttggatt 9801237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 11082043 - 11082234
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatg 357  Q
    ||||||||||||||||||  ||  ||| |||| |||||||||||||   |  || |||||||  |||||| |||||  ||||| ||||| |||  |||||    
T  11082043 ttttattcattcagaaaggaagcagtacaaggaaagggtcaagcattagaggctgcaaggcaggggatctccatccatttcttgttctccctatagtatg 11082142  T
Q  358 tttt-tctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| ||||||||||| | ||||||| ||||| |||||| | ||||| ||||||||||||||||| ||||||||||    |||||||||||||||    
T  11082143 ttttttctattgttttttcatgatgtgtgttgtcatgtgtagctaaacctctttgattagggttccacgatgaacc---ccttatttgttggatt 11082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 457
Target Start/End: Complemental strand, 21544400 - 21544305
Alignment:
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcatta 457  Q
    |||||||||||||||||||||| || |||   ||| |||||||||  |||||||||||||||| | |||||||| |||||||||||||||||| |||||    
T  21544400 ttttctattgttttgtaatgatataggtt---atgagcaactaaacttctttgattagggttccatgatgaaccccttcttatttgttggattccatta 21544305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 451
Target Start/End: Complemental strand, 20050498 - 20050396
Alignment:
Q  348 ctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||||||| | || | |||| |||||||||||| ||||| |||| |||| ||||| ||||||||||| || ||||||| |||||||||||||     
T  20050498 ctagggtatgtttttattttatgttgttatgatgtatgtttccatgagcaaataaacctctt-gattagggttccactatgaaccccttcttatttgtta 20050400  T
Q  448 gatt 451  Q
    ||||    
T  20050399 gatt 20050396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 447
Target Start/End: Original strand, 9071005 - 9071114
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||  ||||||| | | |||||| |||||  || |||| ||||| | ||||||||||||    
T  9071005 tcttcttctctctaaggtatgtttttctattgttttgttatgattgatgttgctacgagcaact-aaacttatttattatggttccaagatgaacctctt 9071103  T
Q  437 cttatttgttg 447  Q
    ||| |||||||    
T  9071104 cttgtttgttg 9071114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 410
Target Start/End: Original strand, 9552623 - 9552801
Alignment:
Q  234 tacaaatagagacccatgcatactattttattcattcagaaagctagtggtag-aaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcat 331  Q
    ||||||||||||||  |||| ||  ||| | ||||||||||| |||  ||| | |||||||||||||||||||   | |||||||| |  |||||| |||    
T  9552623 tacaaatagagaccgttgcacacactttaactcattcagaaaactaacggtggcaaggcaagggtcaagcatcaagagcttcaaggaagaggatctccat 9552722  T
Q  332 cctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactcttt 410  Q
    | || |||| ||||||||||||||| |||||||||| |||||| |||||||  | | ||||| ||||||||| ||||||    
T  9552723 catcctcttgttctctctagggtatatttttctattattttgtgatgatgtcagcttccatgagcaactaaacctcttt 9552801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 457
Target Start/End: Complemental strand, 21537059 - 21536961
Alignment:
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcatta 457  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||  | |||||||||||||| |  ||||||  ||||||||||| |||||| |||||    
T  21537059 ttttctattgttttgtaatgatatcagttgccatgagcaactaaacttatttgattagggttccattatgaactccttcttatttgatggattccatta 21536961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 443
Target Start/End: Original strand, 7151461 - 7151561
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| |||||||||||||||| |||| | |||| |||||| ||||||||||| ||||||||| ||| ||||||||||||| | |||||| |  |||||||    
T  7151461 ttctgtctagggtatgtttttatattatattgttatgatgcatgttgccatgagcaactaaacctc-ttgattagggttccatgatgaaaccattcttat 7151559  T
Q  442 tt 443  Q
    ||    
T  7151560 tt 7151561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 2092981 - 2092863
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||||||||| || || |  |||| ||||||| |||||| ||||  || ||||||||||  |||||| ||| || || | |||||| ||||||| ||    
T  2092981 ttttattcattcaaaacgcaaccggtacaaggcaatggtcaaccatcaaaatttcaaggcaaatgatctttatcttcctcatgttctctatagggtacgt 2092882  T
Q  359 ttttctattgttttgtaat 377  Q
    |||||||||||||||||||    
T  2092881 ttttctattgttttgtaat 2092863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 18468250 - 18468177
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgatta 415  Q
    |||||| |||||||||||||||||||||||| | ||||  | |||||||||  ||||||||||||||| |||||    
T  18468250 ttctctttagggtatgtttttctattgttttcttatgacatttgttgccataagcaactaaaactcttagatta 18468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 20470304 - 20470224
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatg--atgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    |||||||||||||||| |||||| ||||||||| |||  |||||| ||||||||  |||||||| | ||||||||||||||    
T  20470304 ttctctctagggtatgcttttcttttgttttgttatgatatgtatattgccatgaacaactaaaccactttgattagggtt 20470224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 7142631 - 7142756
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacc---t 433  Q
    |||| ||||||||||||||| ||||| || | |||| | || ||||||||||||||| ||||||||| ||| ||||| ||||||| | ||||||||   |    
T  7142631 tcttgttctctctagggtatatttttgtaatattttattataatgtatgttgccatgagcaactaaacctc-ttgataagggttccaagatgaacccatt 7142729  T
Q  434 c-ttcttatttgttggatttcattaat 459  Q
    | |||||||||||||||| | ||||||    
T  7142730 cattcttatttgttggatattattaat 7142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 451
Target Start/End: Complemental strand, 10054439 - 10054351
Alignment:
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| |||||||||||||| |||| ||||| | ||||||| |||| || ||||||||||||||| |||| ||| |||||||||| ||||    
T  10054439 tattattttgtaatgatgtttgttaccatgagtaactaaacctctctttattagggttctacgacgaacatctacttatttgttagatt 10054351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 17880490 - 17880418
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgt 394  Q
    |||||| ||||||| | || ||||||||| ||||||||||  |||| |||||||||||||| |||||||||||    
T  17880490 ggatctccatcctcctattgttctctctatggtatgttttattattattttgtaatgatgtttgttgccatgt 17880418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 459
Target Start/End: Original strand, 15757981 - 15758127
Alignment:
Q  312 tcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttg 411  Q
    ||||||||  ||||||||||| || |||| || |||||||| ||| |||||||||| ||||||||||||||  ||| |||||  ||| |||   ||||||    
T  15757981 tcaaggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgtcggtttccatgaacaaataatcttctttg 15758080  T
Q  412 attagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||| |||||    ||||||| |||||||||| || ||||| ||||||    
T  15758081 attaaggttccttcatgaacc-cttcttattttttagatttgattaat 15758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 19139490 - 19139383
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctct 435  Q
    |||| |||||| ||||||||   ||||| || ||||||||||||||||||| ||||||| |||||||  ||| |||||||| | ||  ||||||||||||    
T  19139490 tcttgttctctttagggtattcatttctcttattttgtaatgatgtatgttaccatgtgtaactaaacatctcttgattagtgctccgcgatgaacctct 19139391  T
Q  436 tcttattt 443  Q
     |||||||    
T  19139390 acttattt 19139383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 20738889 - 20738782
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctct 435  Q
    |||| |||||| ||||||||   ||||| || ||||||||||||||||||| ||||||| |||||||  ||| |||||||| | ||  ||||||||||||    
T  20738889 tcttgttctctttagggtattcatttctcttattttgtaatgatgtatgttaccatgtgtaactaaacatctcttgattagtgctccgcgatgaacctct 20738790  T
Q  436 tcttattt 443  Q
     |||||||    
T  20738789 acttattt 20738782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 451
Target Start/End: Original strand, 23744526 - 23744625
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttga-ttagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||| |||| || |||||||||||||||  | ||| ||||| ||| |||||| | ||||||||||||| |||| ||||  ||||||||||||||    
T  23744526 gtatgtttttatattattctgtaatgatgtatgtcactatgagcaaccaaacctctttcaattagggttctacgttgaatctctatttatttgttggatt 23744625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 444
Target Start/End: Complemental strand, 12358480 - 12358300
Alignment:
Q  263 attcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttttt 362  Q
    ||||||||| |||||||  |||| ||| ||||||||||| ||| |||| ||||| ||  || | ||| |||||  ||| |||||| || | |||||||||    
T  12358480 attcattcaaaaagctaacggtacaagacaagggtcaaggatcacaacatcaagacatagggttttc-tcctccccttgttctctatatgatatgttttt 12358382  T
Q  363 ctattgttttgtaatgatgtatgttgccatgtgcaactaaa-actctttgattagggttctacgatgaacctcttcttatttg 444  Q
    || |||||||||||||  || |||| ||||||| ||||||| ||   ||||||  ||||| | ||||||||||| ||||||||    
T  12358381 ctgttgttttgtaatggcgtctgttaccatgtg-aactaaatacctcttgattcaggttccatgatgaacctctacttatttg 12358300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 21472265 - 21472303
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaa 275  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  21472265 aaatagagacccttgcacactattttattcattcagaaa 21472303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 21537161 - 21537111
Alignment:
Q  255 actattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc 305  Q
    ||||||||||||||||| |||||||| |||| |||| |||||| |||||||    
T  21537161 actattttattcattcaaaaagctagcggtacaaggaaagggtaaagcatc 21537111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 459
Target Start/End: Complemental strand, 39249681 - 39249633
Alignment:
Q  411 gattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||||||||||||  ||||||||||  ||||||||||||||| ||||||    
T  39249681 gattagggttctaaaatgaacctctatttatttgttggatttaattaat 39249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 500
Target Start/End: Original strand, 11437839 - 11438143
Alignment:
Q  196 catactttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagg 295  Q
    |||| ||||||||| |||| | ||||||||| |||||| | ||||| |||||  | || ||||||||||||||| ||||||||||| ||| |||||||||    
T  11437839 catattttcactctgttaacccctaagtaatgatgcatcataaatatagaccattacacactattttattcatttagaaagctagtagtacaaggcaagg 11437938  T
Q  296 gtcaagcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgt 394  Q
    ||||||||||   | |||||| |||  |||||| ||||||  |||| |||||| |||||||||||||| |||||| |||||||||||||| || ||||||    
T  11437939 gtcaagcatcatgagcttcaaagcagaggatctccatccttctcttgttctctgtagggtatgtttttttattgtcttgtaatgatgtatatttccatgt 11438038  T
Q  395 gcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaattnnnnnnnnnttcggtttatgatctaaagtctgat 494  Q
    ||||||||   |||||||||| ||||  |||||||||| ||||||||||||||||||  ||||||          ||| |||||| ||||||||||||||    
T  11438039 gcaactaagcatctttgatta-ggtttaacgatgaaccccttcttatttgttggattctattaataaagtatttattcagtttataatctaaagtctgat 11438137  T
Q  495 ttaatt 500  Q
    ||||||    
T  11438138 ttaatt 11438143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 237 - 443
Target Start/End: Complemental strand, 30850686 - 30850480
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    ||||||||||||||||| | | |||||||||||||||||||||| |||| |||||||||||||| |||   |  || ||||||  |||||| |||||||     
T  30850686 aaatagagacccatgcaaattcttttattcattcagaaagctagcggtacaaggcaagggtcaaacataagagatttaaggcagaggatctccatcctcc 30850587  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    | || ||||||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||| ||||||||||| ||||  | |||||||  |||    
T  30850586 tattgttctctctagggtatgtttttctattgttttgtaatgttgttagttgtcatgtgcaactaaacctctttgattaaggtttcaagatgaactcctt 30850487  T
Q  437 cttattt 443  Q
    |||||||    
T  30850486 cttattt 30850480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 207 - 447
Target Start/End: Complemental strand, 6887867 - 6887627
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| ||||||||||| ||||| || |||||||||||  |||| |   ||||||| ||  |||||||| | |||| ||| |||| ||||||||||     
T  6887867 tctcttaacctctaagtaatgatgcactataaatagagacct-tgcagaaatttttattgatatagaaagcttgcggtacaagacaagagtcaagcatca 6887769  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc-tattgttttgtaatgatgtatgttgccatgtgcaactaaaac 405  Q
     | ||| ||||    |||||||||||||| | || |||| |||| |||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  6887768 tagcttaaaggttgaggatcttcatcctcatattgttctatctaaggtatgtttttcctattgttttgtaatgatgtcggttgccatgtgcaactaaacc 6887669  T
Q  406 tctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    |||||||||||||||| ||||||| ||||||| |||||||||    
T  6887668 tctttgattagggttccacgatgatcctcttcatatttgttg 6887627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 209 - 451
Target Start/End: Complemental strand, 12774525 - 12774282
Alignment:
Q  209 tcttaaactctaagtaataatgcattacaaatagagacccatgcatac--tattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| ||||||||  ||||| || ||||||| | || |||| ||  | ||||||| |||||||| | |||||||| ||| |||||||||| ||||     
T  12774525 tcttaaaccctaagtaacgatgcactataaatagacagccttgcacacacttttttatttattcagaagg-tagtggtacaagacaagggtcaaacatca 12774427  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     ||||||||||||   ||| ||| | ||  |||| ||||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  12774426 gaacttcaaggcagaagattttccttctactcttgttctctctagattatgtttttctattgttttgtaatgatgaaggttgccatgtgcaactaaacct 12774327  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||| | ||||| | ||||||||| || ||||||||| ||||    
T  12774326 ctttgatcaaggttccaagatgaaccttttattatttgttagatt 12774282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 323 - 459
Target Start/End: Original strand, 12957076 - 12957212
Alignment:
Q  323 gatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttct 422  Q
    |||||||||| || |||| |||||| ||||||||||||||||| |||||||| ||||||| | || ||||||||||||||| ||||||||||||| ||||    
T  12957076 gatcttcatcatcatcttgttctctatagggtatgtttttctaatgttttgttatgatgtttattaccatgtgcaactaaacctctttgattaggattct 12957175  T
Q  423 acgatgaacctcttcttatttgttggatttcattaat 459  Q
    |  |||||   ||||||||||||||||||||||||||    
T  12957176 aaaatgaatgccttcttatttgttggatttcattaat 12957212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 201 - 451
Target Start/End: Original strand, 18771377 - 18771628
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | || |||||| || || |   ||||||||||| |||| ||| ||||||||||| ||||| | |  | || ||||||| ||||||    
T  18771377 tttcactctcttaatccctcagtaatcatacactcttaatagagacccttgcacactcttttattcatttagaaatccatcgatacaaggcaatggtcaa 18771476  T
Q  301 gcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    ||||| | | |||||||| |   ||||| ||||||| | || |||||||||| |||| |||||||||||||||||||||||||  |||||||||   |||    
T  18771477 gcatcaggagcttcaaggtagatgatctccatcctcattttgttctctctagagtatctttttctattgttttgtaatgatgtcggttgccatgataaac 18771576  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||  ||||||||||||| ||| |||||||| | ||||||||||||||||||    
T  18771577 taatcctctttgattaggattccacgatgaagcccttcttatttgttggatt 18771628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 218 - 451
Target Start/End: Original strand, 28074952 - 28075187
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||||| || |||||||||||  || | |||||||||||||||||||| |||||  ||| ||| |||||||||| ||||  ||||| | ||    
T  28074952 ctaagtaattatgcactataaatagagacctttgtacactattttattcattcagaaggctagcagtataagacaagggtcaaacatcataactttatgg 28075051  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatg-tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgatta 415  Q
    ||  ||||||  |||||| |||| ||||  |||||||||| ||||| ||||||||||||||||| |   |||||||||| ||||||| ||||  ||||||    
T  28075052 cagaggatctctatcctcctcttgttcttactagggtatgttttttatattgttttgtaatgatatcacttgccatgtggaactaaatctctcatgatta 28075151  T
Q  416 gggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||| |||||||||  |||||||||| |||||||    
T  28075152 gggttccacgatgaactccttcttatttattggatt 28075187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 257 - 451
Target Start/End: Complemental strand, 13583226 - 13583031
Alignment:
Q  257 tattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggta 355  Q
    ||||||||||||||| |||||||| |||| |||||||||||||| ||||   | |||||||||   |||||| || |  | |||| |||| | |||||||    
T  13583226 tattttattcattcataaagctagaggtacaaggcaagggtcaaccatcaagagcttcaaggcggaggatctccaccaccctcttattctttgtagggta 13583127  T
Q  356 tgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||| |||||||||||||||||| ||||| |||| | ||||||| |||||| |||||||||| || ||||| | |||||||| |||||||||    
T  13583126 tgtttttccattgttttgtaatgatgtttgttgtcatgagtaactaaatctctttcattagggttccacaatgaaacccttcttatatgttggatt 13583031  T

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Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 507
Target Start/End: Complemental strand, 27085202 - 27084933
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    |||||||||||| |||| ||| ||||||||||| | ||||||   |||| ||| |||||||||||||||  ||||||||| ||  |||||| |||||||     
T  27085202 aaatagagacccctgcacactcttttattcatttaaaaagctta-ggtacaagtcaagggtcaagcatcaaaacttcaagacagaggatctccatcctcc 27085104  T
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||  || | ||||||||| ||||||||| ||| |||||  |||| |||| ||||||||| |||||||||||||| |  ||||||||||  ||    
T  27085103 tcttgttctcattaag-tatgtttttatattgttttttaacgatgtcggttgtcatgagcaactaaacctctttgattagggcttcacgatgaacccttt 27085005  T
Q  437 cttatttgttggatttcattaat-tnnnnnnnnnttcggtttatgatctaaagtctgatttaatttgtatat 507  Q
     |||||||||||| |  ||||||           ||| ||||||||||||||||||||||||||||||||||    
T  27085004 tttatttgttggactcaattaataaagttttttattcagtttatgatctaaagtctgatttaatttgtatat 27084933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 196 - 447
Target Start/End: Original strand, 30544169 - 30544424
Alignment:
Q  196 catactttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaa--gctagtggtagaaggcaa 293  Q
    |||| |||||||||||||| | ||||||||| || || || ||||||||| |  |||| ||| ||||||||||| |||||  |||||||||  |||||||    
T  30544169 catattttcactctcttaacccctaagtaatcatacactataaatagagatcattgcacactcttttattcatttagaaaaggctagtggttcaaggcaa 30544268  T
Q  294 gggtcaagca-tcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttct-attgttttgtaatgatgtatgttgcca 391  Q
    | ||||| || | |   ||||||||||  |||||||||||||| |||| || ||| || | ||| ||||| | |||||||||||||||||   |||||||    
T  30544269 gagtcaaacaataggcgcttcaaggcataggatcttcatcctcctcttgttttctttatgatattttttttttattgttttgtaatgatggtggttgcca 30544368  T
Q  392 tgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    || |||||| || || |||||||||||||| | |||||| ||||||||||||||||    
T  30544369 tgagcaactgaacctatttgattagggttccatgatgaatctcttcttatttgttg 30544424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 459
Target Start/End: Original strand, 24120711 - 24120960
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| ||||||||| ||    || |||||||||||  |||| ||  ||||| | |||||||||||||  |||  ||| |||||| ||||||||     
T  24120711 tctcttaaacactaagtaatcatatgctataaatagagaccattgcacacacttttaatgattcagaaagctaccggtttaagccaagggccaagcatca 24120810  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  | |||||||  ||||||  |||||| |||| ||||||||| ||||| |||||  |||||||  ||||||||||||||||||||  |||||||| ||    
T  24120811 gagttccaaggcagaggatctctatcctcctcttgttctctctacggtattttttta-attgtttgttaatgatgtatgttgccatg--caactaaacct 24120907  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||| ||||||| | |||||||  |||||||||||||||||| |||||||    
T  24120908 ctttgatcagggttccaagatgaactccttcttatttgttggattccattaat 24120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 342 - 448
Target Start/End: Original strand, 13304986 - 13305091
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||||||| ||||||||||||||| | |||||||  ||||||||  ||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  13304986 ttctctctagggtatatttttctattgttttcttatgatgtcggttgccataagcaactaaacctc-ttgattaggtttctacgatgaaccccttcttat 13305084  T
Q  442 ttgttgg 448  Q
    |||||||    
T  13305085 ttgttgg 13305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 23876526 - 23876637
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||   ||||||| || | |||||| | |||    
T  23876526 tcttgttctatctacggtatgtttttctattgttttgtaatgatgtatgtttccatgcgcaactaaacctct---attagggctcgaagatgaatcactt 23876622  T
Q  437 cttatttgttggatt 451  Q
    |||||||||||||||    
T  23876623 cttatttgttggatt 23876637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 451
Target Start/End: Original strand, 32239835 - 32239958
Alignment:
Q  327 ttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacga 426  Q
    ||||||||| |||| |||| ||||| | |||||||||||||| ||||| ||||||| |||||   || ||||||||| ||||| |||||||||| || ||    
T  32239835 ttcatcctcctcttgttctttctagagcatgtttttctattgatttgttatgatgtctgttgttgtgagcaactaaacctctt-gattagggttttaaga 32239933  T
Q  427 tgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||||||||||||    
T  32239934 tgaacctcttcttatttgttggatt 32239958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 350 - 459
Target Start/End: Complemental strand, 29046824 - 29046716
Alignment:
Q  350 agggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgga 449  Q
    ||||||| |||| ||||| |||||| ||||||| |||||||||| | ||||||| || |||||||||||||| |||||||||| ||||||||||||||||    
T  29046824 agggtatattttactattattttgttatgatgtttgttgccatgagaaactaaatct-tttgattagggttccacgatgaaccccttcttatttgttgga 29046726  T
Q  450 tttcattaat 459  Q
     || ||||||    
T  29046725 atttattaat 29046716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 24927403 - 24927273
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggtt 420  Q
    ||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||    |||| ||| |||||| || |||| | |||| |||||    
T  24927403 ggatcttcatcctccccttgttctctttagggtatgtttttctattgttttgtaatgatgccatttgctatgagcaactgaacctctctcgatttgggtt 24927304  T
Q  421 ctacgatgaacctcttcttatttgttggatt 451  Q
    ||| ||||||| | ||||||||| |||||||    
T  24927303 ctaagatgaacttattcttattttttggatt 24927273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 331 - 444
Target Start/End: Complemental strand, 28260079 - 28259968
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| ||||||||| |||||||||||||||| |||| | |||||||  |||| || |||| |||||| ||  ||||||||||||||| ||||||    
T  28260079 tcctcctcttgttctctctatggtatgtttttctattattttatgatgatgtcagttgtcacgtgccactaaacct--ttgattagggttctaggatgaa 28259982  T
Q  431 cctcttcttatttg 444  Q
    ||||||||||||||    
T  28259981 cctcttcttatttg 28259968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 5154278 - 5154468
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    |||| |||||||||||||||    ||| |||||||||| ||| ||||  ||||| |||| |  |||||| ||||||  | || ||| ||||| ||||| |    
T  5154278 ttttgttcattcagaaagcttacagtacaaggcaagggccaaccatcagaactttaaggtagaggatctccatccttcttttgttcactctacggtatat 5154377  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||  ||||||| ||||||||  |||| |||| ||||||||| || |||||||| ||||| |||||||||| ||| ||||||||||||||    
T  5154378 ttttct--tgttttgcaatgatgtcggttgtcatgagcaactaaacctatttgattaaggttccacgatgaaccccttattatttgttggatt 5154468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 28900851 - 28900748
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||  || ||||||||| ||| ||||||  ||||| |||||||||| ||||||||    
T  28900851 ttctctctaggatatgtttttctattgttttgttatgatgtctgttgcactgagcaactaaacctc-ttgatt-cggttccacgatgaaccccttcttat 28900754  T
Q  442 ttgttg 447  Q
    ||||||    
T  28900753 ttgttg 28900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 429
Target Start/End: Complemental strand, 16051827 - 16051739
Alignment:
Q  342 ttctctctagggtatgttttt-ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatga 429  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||| ||||||| |||||| ||||||||| || |||||    
T  16051827 ttctctctaggatatgttttttctattgttttgttatgatgtttgttgccatgtgaaactaaacctctttaattagggttttaagatga 16051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 24094667 - 24094851
Alignment:
Q  264 ttcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc 363  Q
    |||||||  |||| |||||||  |||||||||||||| ||||  |  |||||||||  | ||||  |||||| |||| || | ||||| |||||||| ||    
T  24094667 ttcattcttaaagttagtggttcaaggcaagggtcaaacatcaaagtttcaaggca--gaatctctatcctcctcttgttttgtctagagtatgtttctc 24094764  T
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||| || |||| |||| ||||| ||||||||| ||| ||||||| ||||||| ||| || | ||||||||||||||||||    
T  24094765 tattgttttgttatcatgtttgtttccatgagcaactaaacctc-ttgattacggttctaagattaatcccttcttatttgttggatt 24094851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 451
Target Start/End: Complemental strand, 15213358 - 15213178
Alignment:
Q  264 ttcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttc 363  Q
    ||||||||||||||||| |||  ||||||||||||| |||||  |  |||||||||     ||  ||||||| || | |||| |||||||||||||||||    
T  15213358 ttcattcagaaagctagcggttcaaggcaagggtcatgcatcagagtttcaaggca-----tcc-catcctcctcatgttctttctagggtatgtttttc 15213265  T
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
     ||| |||||| ||||||| |||| ||||| |||||||||  || ||||||| ||||||| |||||| | |||||||| |||||||||    
T  15213264 aattattttgttatgatgtttgtttccatgagcaactaaacatc-ttgattatggttctaagatgaatcccttcttatctgttggatt 15213178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 451
Target Start/End: Complemental strand, 28290925 - 28290787
Alignment:
Q  310 cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctt 409  Q
    ||||||| ||| |||||| ||||||| | ||  |||||||||||| || |||||| |||||||||| || || ||||||  |||||||||||||   |||    
T  28290925 cttcaagacaaaggatctccatcctcctattgctctctctagggtgtggttttcttttgttttgtattgttgcatgttgtgatgtgcaactaaa--cctt 28290828  T
Q  410 tgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    | ||||||||| ||||||||||| || |||||||||||||||    
T  28290827 ttattagggttatacgatgaacc-ctacttatttgttggatt 28290787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 447
Target Start/End: Complemental strand, 13529642 - 13529539
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    ||||| |||||| || |||| || |||||||||||||| |||| ||||||| ||||||| |||| ||||||||||||| ||||| ||| ||| |||||||    
T  13529642 tctctggggtatattattcttttcttttgtaatgatgtttgttaccatgtgtaactaaacctctattgattagggttccacgataaacatctacttattt 13529543  T
Q  444 gttg 447  Q
    ||||    
T  13529542 gttg 13529539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 345 - 447
Target Start/End: Complemental strand, 13619181 - 13619078
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttattt 443  Q
    ||||| |||||| || |||| || |||||||||||||| |||| ||||||| ||||||| |||| ||||||||||||| ||||| ||| ||| |||||||    
T  13619181 tctctggggtatattattcttttcttttgtaatgatgtttgttaccatgtgtaactaaacctctattgattagggttccacgataaacatctacttattt 13619082  T
Q  444 gttg 447  Q
    ||||    
T  13619081 gttg 13619078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 431
Target Start/End: Complemental strand, 22892773 - 22892678
Alignment:
Q  337 tctttttctctctagggtatgtttttcta--ttgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaac 431  Q
    |||| ||||||||||||||||||||||||  || ||||||  |||||| |||||||||| ||||||||| ||| ||||||||||||| | |||||||    
T  22892773 tcttgttctctctagggtatgtttttctatttttttttgttctgatgtctgttgccatgagcaactaaacctc-ttgattagggttccaagatgaac 22892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 459
Target Start/End: Complemental strand, 11308348 - 11308243
Alignment:
Q  353 gtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggattt 452  Q
    ||||||||||||||| |||||| ||||||| ||||| |||| |||| |||| || |||||  | ||||| | |||||||| ||||||||||||||||| |    
T  11308348 gtatgtttttctattattttgttatgatgtttgttgtcatgagcaaataaacct-tttgaaaaaggttccaagatgaaccccttcttatttgttggatat 11308250  T
Q  453 cattaat 459  Q
     ||||||    
T  11308249 tattaat 11308243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 14184556 - 14184616
Alignment:
Q  391 atgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||| ||||||| |||||||||||| |||| || |||| |||||||||||||||||||||    
T  14184556 atgtgaaactaaacctctttgattagagttccactatgatcctcttcttatttgttggatt 14184616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 23893664 - 23893735
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatg 393  Q
    |||||| ||||||| | || |||||||||| ||| ||| |||||||||||||| ||| ||||||||||||||    
T  23893664 ggatctccatcctcctattgttctctctagagtaggttattctattgttttgttatgttgtatgttgccatg 23893735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 27118246 - 27118190
Alignment:
Q  385 gttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| |||| ||||||||| |||||||| ||||||||||||||||||| ||| ||||    
T  27118246 gttgtcatgagcaactaaatctctttgagtagggttctacgatgaaccccttattat 27118190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 507
Target Start/End: Original strand, 29292573 - 29292606
Alignment:
Q  474 gtttatgatctaaagtctgatttaatttgtatat 507  Q
    |||||||||||||||| |||||||||||||||||    
T  29292573 gtttatgatctaaagtatgatttaatttgtatat 29292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 18786128 - 18786232
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | ||||||||| || || ||  ||| ||||||  |||| ||| ||||||||||| ||||||| |  |||| |||| || ||||||    
T  18786128 tttcactctcttaatccctaagtaatcatacactattaattgagacctttgcacacttttttattcatttagaaagccatcggtacaaggaaatggtcaa 18786227  T
Q  301 gcatc 305  Q
    |||||    
T  18786228 gcatc 18786232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 11423 - 11179
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||  ||||||||||||    || |||||||||||| |||| |   |||||||||||||||||||||  | || |||||||||||||||||||     
T  11423 tctcttaaatcctaagtaataatatgctataaatagagacccttgcacatatttttattcattcagaaagctaacgttacaaggcaagggtcaagcatca 11324  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  | ||||| |  |||| | ||||||| |||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||    
T  11323 aagttccaaggtagaggatatccatcctcctcttgttctctctagtgtatgtttttctattgttttgtaacgatgtatgtttccatgtgcacctaaacct 11224  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||||| || |||||| ||||||||| |||||||    
T  11223 ctttgattagggttctaagaagaacctattcttattttttggatt 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 207 - 450
Target Start/End: Complemental strand, 8393 - 8150
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||| ||| ||||||||||||    || |||||||||||| |||| ||  ||||||||||||||||||||| || || || ||||||||||||||||     
T  8393 tctctttaaccctaagtaataatatgctataaatagagacccttgcagacatttttattcattcagaaagctaatgttacaacgcaagggtcaagcatca 8294  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  | ||||| |  |||| | ||||||| |||| |||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||    
T  8293 gagttccaaggtagaggatatccatcctcctcttgttctctctagtgtatgtttttctattgttttgtaacaatgtatgtttccatgtgcaactaaacct 8194  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggat 450  Q
     |||||||||||||| | || |||||||||||||||| ||||||    
T  8193 atttgattagggttcgaagaagaacctcttcttattttttggat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 21842858 - 21842614
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| |||||||||||| || || ||| ||| |||| |||||||  ||||||| |||||||||||||| |||  |||||| || |||||||||     
T  21842858 tctcttaaaccctaagtaataattcaatataaacagaaacccttgcatacacttttatttattcagaaagctagaggttcaaggcatggttcaagcatca 21842759  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     | ||||||||||   ||| | ||| ||| |||  |||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||    
T  21842758 gagcttcaaggcagatgatttacatgctcctctcgttctctttagggtatgcttttatattgttttgtaatgatgtatgttgccatgtacaactaaacct 21842659  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||| | |||||||   |||||||||||||||||    
T  21842658 ctttgattagggttccaagatgaactcattcttatttgttggatt 21842614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 21844485 - 21844243
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| |||||||||||| || || ||||||| |||| |||| ||  ||||||| |||||| ||||||| |||  |||||| ||||||||||||     
T  21844485 tctcttaaaccctaagtaataattcaatataaatagaaacccctgcacacacttttatttattcagtaagctagcggttcaaggcatgggtcaagcatca 21844386  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     | ||||||||||  |||| | ||| ||| |||  |||||| |||||| |||||||||  |||||||||||||||||||||||||||| |||||||| ||    
T  21844385 gagcttcaaggcagaggatttacatgctcctctcgttctctttagggtttgtttttct--tgttttgtaatgatgtatgttgccatgtacaactaaacct 21844288  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||| | |||||||   |||||||||||||||||    
T  21844287 ctttgattagggttccaagatgaactcattcttatttgttggatt 21844243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 209 - 445
Target Start/End: Complemental strand, 17884224 - 17883988
Alignment:
Q  209 tcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgca 308  Q
    |||||||||||||||||| ||| | || |||||||||||  |||| |   ||||||||||| ||||||||||| ||| |||||||||||||||||||  |    
T  17884224 tcttaaactctaagtaattatg-actataaatagagaccattgcacatacttttattcatttagaaagctagtagtacaaggcaagggtcaagcatcaga 17884126  T
Q  309 acttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct 408  Q
      |||||||||  |||| |   || || |||| | || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  17884125 gattcaaggcagaggatttctgtcatcctcttgtcctttctagggtatgtttttctattgttttgtaatgatgttggttgccatgtgcaactaaacctct 17884026  T
Q  409 -ttgattagggttctacgatgaacctcttcttatttgt 445  Q
     ||||||||||||| |  ||||||||||||| ||||||    
T  17884025 cttgattagggttccaatatgaacctcttctcatttgt 17883988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 449
Target Start/End: Original strand, 18819142 - 18819371
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||| |||| |||||||||||| |||| ||| ||||||| |||||||||||||  |||| ||||||| |||||| ||||  | |||| ||     
T  18819142 ctaagtaatgatgtattataaatagagacccttgcaaactcttttatttattcagaaagctaacggtacaaggcaatggtcaaacatcaaagcttccaga 18819241  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagg 417  Q
    ||  ||||||  |||||| |||| ||||  ||||||||||||||||||||||||||||||||||   |||| |||| ||||||| | |||||||||||||    
T  18819242 cagaggatctctatcctcctcttgttcttactagggtatgtttttctattgttttgtaatgatgacggttgtcatgagcaactagacctctttgattagg 18819341  T
Q  418 gttctacgatgaacctcttcttatttgttgga 449  Q
    |||| |||||||  | ||||||||||||||||    
T  18819342 gttccacgatga--cccttcttatttgttgga 18819371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 458
Target Start/End: Original strand, 9504480 - 9504617
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgttttt-ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    |||||| ||||||| |||| ||||||||||||||||||||| | |||||||||| ||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  9504480 ggatctccatcctcctcttgttctctctagggtatgttttttccattgttttgttatgatgtttgttgccatgtacaactaaacctctttgattatggtt 9504579  T
Q  421 ctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    ||| |||||| | |||||||||||||||||| ||||||    
T  9504580 ctaagatgaatcccttcttatttgttggattccattaa 9504617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 458
Target Start/End: Original strand, 9515846 - 9515983
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgttttt-ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    |||||| ||||||| |||| ||||||||||||||||||||| | |||||||||| ||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  9515846 ggatctccatcctcctcttgttctctctagggtatgttttttccattgttttgttatgatgtttgttgccatgtacaactaaacctctttgattatggtt 9515945  T
Q  421 ctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    ||| |||||| | |||||||||||||||||| ||||||    
T  9515946 ctaagatgaatcccttcttatttgttggattccattaa 9515983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 250 - 451
Target Start/End: Complemental strand, 14921707 - 14921508
Alignment:
Q  250 tgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaactt-caaggcaatggatcttcatcctcttctttttctctc 348  Q
    |||| ||| ||| |||||||||||| ||||| |||| ||||||| |||||| |||| | | || |||||||  |||||  ||||||  | || |||||||    
T  14921707 tgcacactctttgattcattcagaaggctagcggtaaaaggcaaaggtcaatcatcacgagtttcaaggcagaggatc--catccttctattgttctctc 14921610  T
Q  349 tagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgg 448  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||| ||||| |||||||||||  |||||||||| ||||||||||||||    
T  14921609 tagggtatgtttttcaattgttttgtaatgatgtcggttgccatgagcaacaaaacctcttcgattagggttcctcgatgaacct-ttcttatttgttgg 14921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 270 - 451
Target Start/End: Complemental strand, 18235912 - 18235730
Alignment:
Q  270 cagaaagctagtggtagaaggcaagggtcaagcatcgcaac-ttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattg 368  Q
    ||||||||||| |||| |||| ||||||||||||||   |  || |||| |  |||||| |||||||||||| ||||||||| |||||||||||||||||    
T  18235912 cagaaagctagcggtacaaggtaagggtcaagcatcaagagatttaaggaagaggatctccatcctcttcttattctctctatggtatgtttttctattg 18235813  T
Q  369 ttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||| ||||||||||| |||||||| ||||||| |||| | ||||| | ||||| |||||| ||||||||||||||||||||    
T  18235812 ttttgt-atgatgtatgtagccatgtgaaactaaacctctatcgattacgattctaagatgaaactcttcttatttgttggatt 18235730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 447
Target Start/End: Original strand, 25474580 - 25474695
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| |||| |||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||| ||| ||||||| ||||| ||||||||    
T  25474580 tcctcctcttattctttctagggtatctttttctattgttttgttatgatgtctgttgccatgagcaactaaacctc-ttgattatggttccacgatgaa 25474678  T
Q  431 cctcttcttatttgttg 447  Q
    || ||||||||||||||    
T  25474679 ccccttcttatttgttg 25474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 451
Target Start/End: Original strand, 24188458 - 24188704
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||||| | || |||||| || ||  | |||||||||||| |||||||||||     |||||| |||||||| |||| ||||||||||||||    
T  24188458 tttcactctcttaacccctgagtaatcatacacaataaatagagacccttgcatactatt-----cattcaaaaagctagcggtacaaggcaagggtcaa 24188552  T
Q  301 gcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    | ||    | ||||| || |  ||||||||||| |  || | ||||||||||||| |||||||||||| |||||  |||| ||  ||||||||| |||||    
T  24188553 ggattaagagcttcacggaagaggatcttcatcttactcatattctctctagggtgtgtttttctattattttgagatgacgtcggttgccatgagcaac 24188652  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| || |||||||| ||||| | |||||||  ||||||||||||||||||    
T  24188653 taaacctgtttgattaaggttccatgatgaactccttcttatttgttggatt 24188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 443
Target Start/End: Complemental strand, 20518784 - 20518686
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttattt 443  Q
    |||||| |||||| ||||||||| ||||||||||||||  ||  ||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  20518784 tctctaaggtatgcttttctattattttgtaatgatgttggtgtccatgagcaactaaacctccttgattagggttctacgatgaaccccttcttattt 20518686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 18533066 - 18532962
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| |||||||||| ||||||| ||||||||| ||||||| | |||||||| ||||||||| |||||| |||||||||| ||||| |||| ||||||||    
T  18533066 ttctgtctagggtatatttttcttttgttttgttatgatgtctattgccatgagcaactaaacctcttt-attagggttccacgataaaccccttcttat 18532968  T
Q  442 ttgttg 447  Q
    ||||||    
T  18532967 ttgttg 18532962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 27917655 - 27917588
Alignment:
Q  238 aatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc 305  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  27917655 aatagagacccttgcacactattttattcattcagaaagctagcggtacaaggcaagggtcaagcatc 27917588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 27917555 - 27917454
Alignment:
Q  358 tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcatta 457  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||  |||||||||||| ||| ||| ||| |  |||| ||||||||||||| |||||    
T  27917555 tttttctattgttttgtaatgatgtcggttgccatgagcaactaaacttctttgattaggtttcaacgttgatcaccttcctatttgttggattccatta 27917456  T
Q  458 at 459  Q
    ||    
T  27917455 at 27917454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 21504189 - 21503997
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||||||| ||||||||| ||||  |||| || |||||||||||  |  | ||||| |   ||||||||||||| | || ||| |||||  ||||||    
T  21504189 ttttattcatttagaaagctaatggttcaaggaaaaggtcaagcatcaaagttccaaggtagatgatcttcatcctcctattgttcactctaaagtatgt 21504090  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||| |||| ||||||||| ||||| | || ||||||||| || |||||| ||| ||| | ||||||||  |||||||||| ||||||    
T  21504089 ttttctattattttataatgatgtttgttgtcgtgagcaactaaacctttttgatcaggattccaagatgaaccctttcttatttgatggatt 21503997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 459
Target Start/End: Original strand, 35708374 - 35708468
Alignment:
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| ||||||| ||||| |||||||||   ||||||||||||||| || ||||||    
T  35708374 tattgttttgttatgatgtatgttgccatgagcaactaaacctc-ttgattaaggttccacgatgaactcattcttatttgttggaatttattaat 35708468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 432
Target Start/End: Original strand, 1733688 - 1733777
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacc 432  Q
    |||| ||||| |||||||||||| ||||||||| ||||||||||||| |||| ||||||||| ||| ||||||||||||  ||||||||||    
T  1733688 ttctttctagtgtatgtttttcttttgttttgttatgatgtatgttgtcatgagcaactaaacctc-ttgattagggtttcacgatgaacc 1733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 27416817 - 27416680
Alignment:
Q  313 caaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttga 412  Q
    |||||||  |||||| ||||||| |||| ||||||||  |||||| |||||||||||||||  || |||| ||||||| ||||  |||||| ||| ||||    
T  27416817 caaggcagaggatctccatcctcctcttgttctctctgaggtatgcttttctattgttttggtataatgtttgttgccgtgtgacactaaacctc-ttga 27416719  T
Q  413 ttagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||| |  ||||||| ||| ||||||||||||||    
T  27416718 ttagggttccaatatgaaccccttattatttgttggatt 27416680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 459
Target Start/End: Complemental strand, 21847986 - 21847874
Alignment:
Q  347 tctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactc-tttgattagggttctacgatgaacctcttcttatttgt 445  Q
    ||||||||||||||| |||||||||||| |||||||  |||||| | |||||||||| ||| |||||||||||||| | |||||||| ||| |||||| |    
T  21847986 tctagggtatgtttt-ctattgttttgtgatgatgttggttgccttatgcaactaaacctcttttgattagggttccaagatgaaccacttattattttt 21847888  T
Q  446 tggatttcattaat 459  Q
    ||| ||| ||||||    
T  21847887 tgggtttaattaat 21847874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 41256898 - 41256782
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||| || ||||||||||||||||||| | ||||| |||||||   || |||| |||| ||||| ||||||||||| ||||||||||  |||||||    
T  41256898 ttctctctcggatatgtttttctattgttttcttatgatatatgttgttgtgagcaattaaacctctt-gattagggttccacgatgaaccctttcttat 41256800  T
Q  442 ttgttggatttcattaat 459  Q
    |||||||| || ||||||    
T  41256799 ttgttggaatttattaat 41256782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 451
Target Start/End: Original strand, 25460371 - 25460616
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtgg-tagaaggcaagggtca 299  Q
    |||||||||||||| | ||||||||| || || || |||||||||||  | || | | ||||||| ||||||||||||| ||| || |||||||||||||    
T  25460371 tttcactctcttaatccctaagtaatcatacactataaatagagaccttttcacaatcttttatttattcagaaagctaatgggtacaaggcaagggtca 25460470  T
Q  300 agcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    | ||||   |      ||||| |||| | || | || |||| |||||||||| |||||||||||||||||||||||||||| |   ||  |||| |||||    
T  25460471 aacatcagga------ggcaaaggatatccaccatcctcttgttctctctagtgtatgtttttctattgttttgtaatgattttgattttcatgcgcaac 25460564  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||| || ||||||||| |||  ||||||||    |||||||||||| ||||    
T  25460565 taaacctatttgattagagtttcacgatgaatacgttcttatttgttagatt 25460616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 459
Target Start/End: Complemental strand, 23909154 - 23909072
Alignment:
Q  376 atgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||||||||||||||||| ||||||||| ||||| ||| ||||||| |||||||| | |||||||||||||||| || ||||||    
T  23909154 atgatgtatgttgccatgagcaactaaacctctt-gatcagggttccacgatgaatcccttcttatttgttggaatttattaat 23909072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 30999356 - 30999423
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctt 409  Q
    ||||||||||||||||||||||||||||||| | ||||||| |||||||||| | ||||||| |||||    
T  30999356 ttctctctagggtatgtttttctattgttttcttatgatgtttgttgccatgagaaactaaacctctt 30999423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 449
Target Start/End: Complemental strand, 16593291 - 16593198
Alignment:
Q  355 atgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgga 449  Q
    ||||||||||||||||||||  |||||| |||||| ||| ||||||||| ||| ||| ||| ||||| |||||| ||| |||||||||| |||||    
T  16593291 atgtttttctattgttttgttttgatgtttgttgcaatgagcaactaaacctc-ttggttaaggttccacgatgtaccccttcttatttattgga 16593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 451
Target Start/End: Original strand, 24047785 - 24048034
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| ||||||||| ||||| || |||||||||  | |||| ||  | ||||||||| ||||||||||||||| |||| ||| | ||||||||     
T  24047785 tctcttaaaccctaagtaatgatgcactataaatagagattcttgcacacactcttattcattgagaaagctagtggtataaggaaagagccaagcatca 24047884  T
Q  307 caacttcaaggcaatggatctt----catcctcttctttttctctctagggtatgtttttct-attgttttgtaatgatgtatgttgccatgtgcaacta 401  Q
     | ||||||||||   | | ||    | ||||| |||| || |||   | |||||||||| | |||| |||||||||||||  |||| ||||||||||||    
T  24047885 gagcttcaaggcaggaggttttttctcctcctcctcttgttttct---gagtatgttttttttattgctttgtaatgatgtcggttgtcatgtgcaacta 24047981  T
Q  402 aaa--ctct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||  |||| ||||||| ||||| | ||||||| | |||||||||||||||||    
T  24047982 aaaacctctcttgattatggttccaagatgaacttattcttatttgttggatt 24048034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 19592633 - 19592710
Alignment:
Q  365 attgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatt 442  Q
    |||||||||||||| | |  |||||||| ||||||| || ||  |||||||||| |||||||||||||||||||||||    
T  19592633 attgttttgtaatgctttcagttgccatatgcaactgaaccttgttgattagggatctacgatgaacctcttcttatt 19592710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 382
Target Start/End: Original strand, 39732120 - 39732284
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| ||||| || |||||||||| | | || ||  |||||||||||||||||||||| |||| |||||||| || || | ||  | ||||||||    
T  39732120 ctaagtaatgatgcactataaatagagactctttcacacacttttattcattcagaaagctagcggtacaaggcaagagtaaaacgtccgagcttcaagg 39732219  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatg-tttttctattgttttgtaatgatgt 382  Q
    ||| |||| ||| | ||| |||| |||||| ||   |||| ||||| |||||||||||||||||||    
T  39732220 caaaggattttc-ttctcgtcttgttctctttaaaatatgttttttttattgttttgtaatgatgt 39732284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 447
Target Start/End: Complemental strand, 19949031 - 19948942
Alignment:
Q  352 ggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||||||||||| ||     |||| |||||||||| ||||||||| ||||| ||||||||||| |||||||| |  |||||||||||||    
T  19949031 ggtatgtttttctattgttgtg-----atgtttgttgccatgagcaactaaacctctt-gattagggttccacgatgaatcctttcttatttgttg 19948942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 15454163 - 15453921
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||| ||||||||| ||| | || |||| ||||||| |||| || | |||||||||| ||||| |||| |||| ||| ||| ||||||| |||     
T  15454163 tctcttaaaccctaagtaatgatgaactataaatcgagacccttgcacac-actttattcatttagaaacctaggggtacaagacaatggtcaagaatca 15454065  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  |||||||||  || | ||| ||||| |||| ||||||||||| ||| ||||| |||| |||  |||||||||  ||| ||||| | | ||||| |     
T  15454064 aactttcaaggcatagggttttc-tcctcctcttgttctctctaggttatatttttatattatttgataatgatgtcagttaccatgggtagctaaacca 15453966  T
Q  407 ct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    || |||||| ||| || |||||||||||||  ||||||| ||||||    
T  15453965 ctcttgatt-gggatccacgatgaacctctatttatttgatggatt 15453921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 31274415 - 31274460
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgt 382  Q
    |||| |||||||||| |||| |||||||||||||||||||||||||    
T  31274415 tcttgttctctctagagtatatttttctattgttttgtaatgatgt 31274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 7e-44; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 52270833 - 52270639
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatg 357  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||| | | ||||| ||||| |||||||||||||| |||| ||||||||||   |||    
T  52270833 ttttattcattcagaaagctagcggtacaaggcaagggccaagcatcaggagcttcacggcaaaggatcttcatcctcctcttgttctctctagatgatg 52270734  T
Q  358 tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa-cctcttcttatttgttggatt 451  Q
    |||||||||||||||||||||||||  ||||||||| | |||||||  | |||||||||||||| |||||||| || |||||||||| |||||||    
T  52270733 tttttctattgttttgtaatgatgtcggttgccatgagaaactaaacttatttgattagggttccacgatgaacccccttcttattttttggatt 52270639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 220 - 507
Target Start/End: Original strand, 21549113 - 21549398
Alignment:
Q  220 aagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaaggc 318  Q
    ||||||| ||||| || ||||| |||||| |||| ||| ||||||||||||| ||| ||||  ||| ||| ||| ||||||||||| | | |||||||||    
T  21549113 aagtaatcatgcaatataaataaagacccttgcacactcttttattcattcaaaaatctagcagtacaagtcaatggtcaagcatcaggatcttcaaggc 21549212  T
Q  319 aatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattaggg 418  Q
    |  |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||  | || ||||  |||||||| |||||   ||||||    
T  21549213 agaggatctccatcctcctcttgttctctctagggtatgtttttctattgttttgtaatgatgtcggctgtcatgaacaactaaatctctt---ttaggg 21549309  T
Q  419 ttctacgatgaacctcttcttatttgttggatttcattaattnnnnnnnnnttcggtttatgatctaaagtctgatttaatttgtatat 507  Q
    ||| |||||||| | ||||||||||||||||||  ||||||          ||| |||||| ||||||||| |||||| ||||||||||    
T  21549310 ttccacgatgaaacccttcttatttgttggattctattaatacagtttttattcagtttataatctaaagtttgatttgatttgtatat 21549398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 287 - 456
Target Start/End: Complemental strand, 14745028 - 14744859
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||||||||||||||||||  | ||||||| ||   ||||| |||||||||||| ||||||||| | |||||||||||||||||||||||||||||  ||    
T  14745028 aaggcaagggtcaagcatctgagcttcaagacagatgatctgcatcctcttcttgttctctctatgatatgtttttctattgttttgtaatgatgtcggt 14744929  T
Q  387 tgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcatt 456  Q
    || |||||||||||||| |||||||| |||||||| | ||||||| | ||||||||| ||||||||||||    
T  14744928 tgtcatgtgcaactaaacctctttgactagggttccaagatgaactttttcttatttattggatttcatt 14744859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 207 - 451
Target Start/End: Original strand, 34533082 - 34533326
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||||||||||||||| ||    || |||||||||| | |||| ||  | ||||||||| ||||| |||   ||  || ||| ||||||||||||     
T  34533082 tctcttaaactctaagtaatcatatgatataaatagagactcttgcacacattcttattcatttagaaaactaacagttcaatgcacgggtcaagcatca 34533181  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  ||||||| |  |||||||||||||| |||| |||||||||||||||||||||| |||||||||  ||||||| ||| | |||||||||||||| ||    
T  34533182 tagtttcaaggaagaggatcttcatcctcctcttgttctctctagggtatgtttttcgattgttttggtatgatgtttgtcgtcatgtgcaactaaacct 34533281  T
Q  407 ctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||    
T  34533282 ctttgattagggttctaagatggaccccttcttatttgttggatt 34533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 261 - 460
Target Start/End: Complemental strand, 11984828 - 11984630
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttt 360  Q
    |||||||||||||||||||  |||  |||||||  ||||||||||  |  | |||||||  |||||| ||||||| |||| ||||||||| | ||| |||    
T  11984828 ttattcattcagaaagctaacggtgcaaggcaaatgtcaagcatcagag-tccaaggcagaggatctccatcctcctcttgttctctctaagatatattt 11984730  T
Q  361 ttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaatt 460  Q
    |||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||||||||||||||| ||||||||    
T  11984729 ttcttttgttttgcgatgatgtatgttgccatgtgcaactaaacctctttgattagggttcaaagataaaccccttcttatttgttggattccattaatt 11984630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 261 - 447
Target Start/End: Original strand, 23223884 - 23224068
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttt 360  Q
    |||||||||||||||||||||| |  | || ||||||||||||||  |  | |||||||  |||||||||||||| |||  |||||  ||||||||||||    
T  23223884 ttattcattcagaaagctagtgattcacggaaagggtcaagcatcagagttccaaggcagaggatcttcatcctcctctagttctc--tagggtatgttt 23223981  T
Q  361 ttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    |||||||||||||||||||||||||||| |||| | || |||| |||||||||| |||||||| |||||||| |||||||| |||||    
T  23223982 ttctattgttttgtaatgatgtatgttgtcatgcggaaataaacctctttgatttgggttctaagatgaaccccttcttatatgttg 23224068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 50047654 - 50047784
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatg-tatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    |||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||| |||||||||||| |||    
T  50047654 ggatctccatcctcctcttgttctctctagggtatgtttttatattgttttgtaatgatgttttgttgccatgagcaactaaacctctttgattagagtt 50047753  T
Q  421 ctacgatgaacctcttcttatttgttggatt 451  Q
     || |||||||| ||||||||||||||||||    
T  50047754 ataagatgaaccccttcttatttgttggatt 50047784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 11769549 - 11769420
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| |||||||||||||| ||| ||||||| ||||||||||| |||||| ||||| ||||||||||||||| || ||| ||||||||||    
T  11769549 ggatctccatcctcctctttttctctctatggtgtgtttttatattgttttgttatgatgaatgtttccatgtgcaactaaaccttttttattagggttc 11769450  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
    || |||||||| ||||||||||||||||||    
T  11769449 taagatgaaccccttcttatttgttggatt 11769420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 201 - 443
Target Start/End: Complemental strand, 26853990 - 26853748
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    ||||||| ||| || | ||||||||| || || || |||||||||||| || | |||||||||||||||||||||||||    ||  ||||||| |||||    
T  26853990 tttcactatctcaacccctaagtaatgatacactataaatagagacccttgaacactattttattcattcagaaagctaacaatatgaggcaagagtcaa 26853891  T
Q  301 gcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    |||||   | |||||||||||   |  ||||||||| |||| | |||||||| |||||||||| ||||||||| ||||||| |||||||| ||||||||     
T  26853890 gcatcaagagcttcaaggcaaaaaaatttcatcctcatcttgtcctctctagagtatgtttttatattgttttataatgatctatgttgc-atgtgcaag 26853792  T
Q  400 taaaactctttgattagggttctacgatgaacctcttcttattt 443  Q
    |||| ||||||||||| |||||||||||||||| ||| ||||||    
T  26853791 taaacctctttgattatggttctacgatgaacccctttttattt 26853748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 207 - 415
Target Start/End: Complemental strand, 15298534 - 15298326
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| ||| |||| |||| ||||||  | || |||||||||| |||| |||||||||| |||| || ||||  ||||| ||||     
T  15298534 tctcttaacccctaagtaatgatgtattataaattgagacctttccacactattttatccattaagaaagctagcggtacaacgcaattgtcaaacatca 15298435  T
Q  307 caacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaact 406  Q
     |  | |||||||  |||| |||| |||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||| ||    
T  15298434 gagttccaaggcagaggatattcaccctcctcttgttctctctagggtatgcttttcttttgttttgtaatgatgtatgttatcatgtgcaactaaacct 15298335  T
Q  407 ctttgatta 415  Q
    |||||||||    
T  15298334 ctttgatta 15298326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 451
Target Start/End: Complemental strand, 19257481 - 19257382
Alignment:
Q  352 ggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||||||||||||||||||||||||  |||| |||| ||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||    
T  19257481 ggtatgtttttctattgttttgtaatgatgtcggttgtcatgagcaactaaacctctttgattagggttccaagatgaaccccttcttatttgttggatt 19257382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 30675993 - 30676121
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttc 421  Q
    |||||| ||||||| ||||  |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||  ||||  ||||||| |||||    
T  30675993 ggatctccatcctcctcttagtctctctagggtatgtttttctattgttttgttatgatgtttgttgccatgagcaact-taacttcttgattaaggttc 30676091  T
Q  422 tacgatgaacctcttcttatttgttggatt 451  Q
     | |||||||| ||||||||||||||||||    
T  30676092 gaagatgaaccccttcttatttgttggatt 30676121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 31314049 - 31314241
Alignment:
Q  259 ttttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgt 358  Q
    ||||||| |||||||||||||| |||| ||||  |||||||| ||||  | || |||||||  |||||| ||||| | |||| ||||||||| ||| |||    
T  31314049 ttttatttattcagaaagctagcggtacaaggttagggtcaaccatcagagctgcaaggcagaggatctccatccccatcttgttctctctatggtttgt 31314148  T
Q  359 ttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    |||||||||| ||||||||||||| ||||  |||||| || |||| |||| ||||||||||||| | ||||| ||||||||| |||||||||||    
T  31314149 ttttctattg-tttgtaatgatgtttgttttcatgtgaaaataaacctctcttgattagggttccaagatgagcctcttcttgtttgttggatt 31314241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 25778199 - 25778390
Alignment:
Q  219 taagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaagg 317  Q
    |||||||||||||| || |||||||||||  |||| ||| ||||||||||| | |||| ||   ||| |||||||||||||| |||| | | ||||||||    
T  25778199 taagtaataatgcactataaatagagacctttgcacactcttttattcatttataaagataacagtacaaggcaagggtcaaacatctggagcttcaagg 25778298  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctt 409  Q
     |  | |||| ||||||| |||  ||||||||||||||||||||||||||||||||||||||| | |||||  |||||||| |||| |||||    
T  25778299 aagagcatctccatcctcctctcgttctctctagggtatgtttttctattgttttgtaatgatatttgttgttatgtgcaattaaacctctt 25778390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 237 - 447
Target Start/End: Complemental strand, 25665421 - 25665210
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcatcctc 335  Q
    |||||||||||| |||| | | ||| ||||||||| ||||||||  ||| ||| |||||||||||||||   | ||||||||||   ||||| |||||||    
T  25665421 aaatagagacccttgcacaatttttaattcattcataaagctagcagtacaagacaagggtcaagcatcatgagcttcaaggcagatgatctccatcctc 25665322  T
Q  336 ttctttttctctctagggtatgtttttctattgt-tttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctc 434  Q
     |||| ||||||||||| |||||||| ||||| | ||| |||||||||  ||| || |  ||||||||| ||||||||||| ||||| |||||||||| |    
T  25665321 ctcttgttctctctaggatatgtttt-ctattttgtttttaatgatgttggtttcctttagcaactaaacctctttgattaaggttccacgatgaacccc 25665223  T
Q  435 ttcttatttgttg 447  Q
    |||||||||||||    
T  25665222 ttcttatttgttg 25665210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 431
Target Start/End: Original strand, 23506221 - 23506452
Alignment:
Q  201 tttcactctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaa 300  Q
    |||||||||||| | | ||||||||||||||| || |||||||||||| || | |  ||| ||||| ||||||||| |||  ||| |||||||| ||  |    
T  23506221 tttcactctcttgagccctaagtaataatgcactataaatagagacccttggacagaattctattctttcagaaagttagcagtacaaggcaagtgttta 23506320  T
Q  301 gcatcgcaa-cttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaac 399  Q
    ||||    | |||| |||||  |||||| ||||||| |||| |||||||||| | ||||||||||||||||||||||||||||  || |  |||||||||    
T  23506321 gcattaagagcttcgaggcatcggatctccatcctcctcttattctctctagagaatgtttttctattgttttgtaatgatgttcgtagttatgtgcaac 23506420  T
Q  400 taaaactctttgattagggttctacgatgaac 431  Q
    ||||  ||||| |||||||||| || ||||||    
T  23506421 taaacatcttttattagggttccacaatgaac 23506452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 447
Target Start/End: Complemental strand, 18300556 - 18300464
Alignment:
Q  356 tgtttttctattgttttgtaatgatgtatgttgccatg-tgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||||||||||| ||||||||||||||||||    ||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  18300556 tgtttttctattgttttgttatgatgtatgttgccatgaaaaaactaaaactctttgcttagggttctaagatgaaccccttcttatttgttg 18300464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 15416567 - 15416457
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttctta 440  Q
    ||||||||  ||||||||||||| ||||||||||| |||||  |||| |||||| ||||||| |||| || |||||||||| ||||||||||||| ||||    
T  15416567 ttctctctttggtatgtttttctcttgttttgtaaagatgtcggttgtcatgtgtaactaaacctctattaattagggttccacgatgaacctctactta 15416468  T
Q  441 tttgttggatt 451  Q
    |||||||||||    
T  15416467 tttgttggatt 15416457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 451
Target Start/End: Original strand, 9328573 - 9328692
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    |||||||||| ||| || ||||||||||||||||||||||||||  |||||||| || ||||| ||||||||| || |||||||| || || | ||||||    
T  9328573 tcctcttcttgttccctatagggtatgtttttctattgttttgttgtgatgtatatttccatgagcaactaaacct-tttgattatggctcgaagatgaa 9328671  T
Q  431 cctcttcttatttgttggatt 451  Q
    ||  |||||||||||||||||    
T  9328672 ccctttcttatttgttggatt 9328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 376
Target Start/End: Original strand, 25730939 - 25731098
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatc-gcaacttcaag 316  Q
    ||||||||||||||| || |||||||||||  |||||||| ||||||||||| | |||| ||   ||| ||||||||||| || |||| | | ||| |||    
T  25730939 ctaagtaataatgcactataaatagagacctttgcatactcttttattcatttataaagataacagtacaaggcaagggtaaaacatcaggagcttaaag 25731038  T
Q  317 gcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaa 376  Q
    | |  |||||||||||||| ||   ||||||||||||||||||||| |||||||||||||    
T  25731039 gaagaggatcttcatcctcctcccgttctctctagggtatgtttttatattgttttgtaa 25731098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 12810741 - 12810862
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||| ||||||||| ||||||||| |||||| |||| || |||||||||| ||||| ||| ||||| ||||||||||| | |||||||  |||    
T  12810741 tcttgttctctttagggtatgcttttctattattttgttatgacgtttgttgccatgagcaacaaaacctctt-gattagggttccatgatgaactcctt 12810839  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||||||| | ||||||    
T  12810840 cttatttgttggatataattaat 12810862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 447
Target Start/End: Original strand, 9353536 - 9353651
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    |||||||||| ||| || ||||||||||||||||||||||||||  |||||||| || ||||| ||||||||| || |||||||  || || | ||||||    
T  9353536 tcctcttcttgttccctttagggtatgtttttctattgttttgttgtgatgtatatttccatgagcaactaaacct-tttgattgtggctcgaagatgaa 9353634  T
Q  431 cctcttcttatttgttg 447  Q
    ||  |||||||||||||    
T  9353635 ccctttcttatttgttg 9353651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 449
Target Start/End: Original strand, 26658071 - 26658181
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||||||||||||||| |||||||||||  |||||| ||||| |||| ||||||||| ||| ||||||| ||||  | ||||||| ||||    
T  26658071 tcttgttctctctagggtatgttttt-tattgttttgttgtgatgtttgttgtcatgagcaactaaacctc-ttgattaaggtttcatgatgaacgtctt 26658168  T
Q  437 cttatttgttgga 449  Q
    |||||||| ||||    
T  26658169 cttatttggtgga 26658181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 9252203 - 9252077
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    |||||||||| |||  | || ||||||||||||||||||||| |   ||||| |||| ||||| ||||||||| ||| |||||| |||||  | ||||||    
T  9252203 tcctcttcttgttccatatatggtatgtttttctattgtttttttgagatgtctgtttccatgagcaactaaacctc-ttgatttgggtttgaagatgaa 9252105  T
Q  431 cctcttcttatttgttggatttcattaa 458  Q
    || ||||||||||||||||||| |||||    
T  9252104 ccccttcttatttgttggattttattaa 9252077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 23519269 - 23519148
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| |||||| |||  ||||||||||||||||||||| ||||||| |||| ||||| | ||||||| ||| || |||| ||||||| | ||||||  ||    
T  23519269 tcttgttctctttagactatgtttttctattgttttgttatgatgtttgttaccatgagaaactaaacctc-ttaattatggttctaaggtgaacccttt 23519171  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||| ||| | ||||||    
T  23519170 cttatttgtttgatcttattaat 23519148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 459
Target Start/End: Complemental strand, 23521226 - 23521144
Alignment:
Q  376 atgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||| |||| ||||| |  |||||| ||||| ||||||||||| | |||||||||||||||||||||||||| | ||||||    
T  23521226 atgatgtctgttaccatgagagactaaacctctt-gattagggttccaagatgaacctcttcttatttgttggatcttattaat 23521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 25126900 - 25126997
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcat 304  Q
    |||||||| | | ||||| | ||| |||| ||||||||| || || | ||| ||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  25126900 tctcttaaccccaaagtagtgatgtattataaatagagatccttgaacacttttttattcattcaaaaagctagcagtacaaggcaagggtcaagcat 25126997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 459
Target Start/End: Original strand, 30782294 - 30782386
Alignment:
Q  366 ttgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||||| || |||||||||| |||| |||||||||  |||| ||||| ||||| | ||||| || |||||||||||||||| || ||||||    
T  30782294 ttgttttgttattatgtatgttgtcatgagcaactaaacatctt-gattaaggttccaggatgagccccttcttatttgttggaatttattaat 30782386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 460
Target Start/End: Complemental strand, 34933537 - 34933436
Alignment:
Q  364 tattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-----ttgattagggttctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    |||||||||||||| |||||||||| |||||||||||| | ||||     ||||| | ||||| ||  |||||| ||||||||||||||||||  |||||    
T  34933537 tattgttttgtaattatgtatgttgtcatgtgcaactatacctctcttgattgatcaaggttccacattgaaccccttcttatttgttggattcaattaa 34933438  T
Q  459 tt 460  Q
    ||    
T  34933437 tt 34933436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 23421136 - 23421085
Alignment:
Q  389 ccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttctt 439  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||| ||||||    
T  23421136 ccatgtgcaactaaacctctcttgattagggttccacgatgaaccacttctt 23421085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 459
Target Start/End: Complemental strand, 24903267 - 24903217
Alignment:
Q  409 ttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    ||||||||||||| | |||||||| |||||||||||||||| || ||||||    
T  24903267 ttgattagggttccatgatgaaccccttcttatttgttggaatttattaat 24903217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 335
Target Start/End: Complemental strand, 27460540 - 27460412
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    |||||||| | ||||||||| || || || |||||||||||| | || ||| |||||||| |||||||| |||| |||| |   ||||| |||||||||     
T  27460540 tctcttaacccctaagtaatgatccactataaatagagacccttacacactcttttattctttcagaaaactagcggtacattacaaggatcaagcatca 27460441  T
Q  307 caacttcaaggcaatggatcttcatcctc 335  Q
     | |||||| |||  |||||||| |||||    
T  27460440 aagcttcaatgcagaggatcttcctcctc 27460412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 219 - 507
Target Start/End: Complemental strand, 11317 - 11027
Alignment:
Q  219 taagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggc 318  Q
    |||||||| ||| | || |||||||||| | |||| ||| ||||||||||||| |||||| || ||| ||||||||||| |||| ||  | |||||||||    
T  11317 taagtaatgatgtactataaatagagacacttgcacacttttttattcattcaaaaagcttgtagtacaaggcaagggttaagcttcagagcttcaaggc 11218  T
Q  319 aatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaac--tctttgattag 416  Q
    |   ||| ||||||||| || | ||||||||| ||||| ||||||||||||||||| || || |||||||||||||||||||||| |  | ||| |||||    
T  11217 agatgattttcatcctcctcatgttctctctaaggtatatttttctattgttttgtgataatttatgttgccatgtgcaactaaaccttttttttattag 11118  T
Q  417 ggttctacgatgaacctcttcttatttgttggatttcattaattnnnnnnnnnttcggtttatga-tctaaagtctgatttaatttgtatat 507  Q
    ||||| |||||||||| ||||| ||||||| ||||| ||||||          ||| |||||||| |||| |||||||||||||||||||||    
T  11117 ggttccacgatgaacc-cttctcatttgttagatttaattaatcaagtttttattcagtttatgattctatagtctgatttaatttgtatat 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 211 - 447
Target Start/End: Original strand, 22262835 - 22263070
Alignment:
Q  211 ttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaac 310  Q
    |||||| ||||||||| |||||  | |||||||||| | |||| ||  ||||||||||| |||||||||| |||  |||||||||||||||||||  | |    
T  22262835 ttaaaccctaagtaatgatgcaccataaatagagactcttgcacacacttttattcattgagaaagctagcggttcaaggcaagggtcaagcatcatagc 22262934  T
Q  311 ttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactcttt 410  Q
    ||||||| |  |||||  |||||||||||| || ||||||  ||||||||||||||||||||||||||||||| ||| ||||||| || | ||  |||||    
T  22262935 ttcaaggtagaggatcgccatcctcttcttattttctctaatgtatgtttttctattgttttgtaatgatgtacgttaccatgtgtaaat-aacgtcttt 22263033  T
Q  411 gattagggttctacgatgaacctcttcttatttgttg 447  Q
    ||||||||||| |  |||||||  |||||||||||||    
T  22263034 gattagggttccaatatgaaccctttcttatttgttg 22263070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 261 - 444
Target Start/End: Complemental strand, 26499463 - 26499280
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttt 360  Q
    |||||||||||||||||||| || | ||||||||||| |||||||  | |||||||| ||  ||||| ||||||| |||| ||||||||| |||||||||    
T  26499463 ttattcattcagaaagctagaggcacaaggcaagggttaagcatcagatcttcaaggaaaatgatctccatcctcctcttgttctctctaaggtatgttt 26499364  T
Q  361 ttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttg 444  Q
    || ||||| |||||||| |||| ||||| |||||||||||||| ||||||||||| ||||  ||| |||| | |||||||||||    
T  26499363 ttatattgctttgtaattatgtttgttgtcatgtgcaactaaatctctttgattaaggtttcacggtgaaacccttcttatttg 26499280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 17860008 - 17859899
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||| || |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| |||| | |||||||  ||||||||    
T  17860008 ttctctatatggtatgtttttctattgttttgtaatcatatttgttgccatgtgcaactaaaactctttgattagagttccaagatgaacaccttcttat 17859909  T
Q  442 ttgttggatt 451  Q
    ||||||||||    
T  17859908 ttgttggatt 17859899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 218 - 457
Target Start/End: Complemental strand, 32930122 - 32929882
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaagg 317  Q
    ||||||||| || ||||| |||||||||| | |||||||  |||||||||||||||||||||| |||| ||| ||| | ||||||||   | |||||  |    
T  32930122 ctaagtaatgatccattataaatagagactcttgcatacacttttattcattcagaaagctagcggtacaagacaatgatcaagcatgagagcttcattg 32930023  T
Q  318 caatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactc-tttgattag 416  Q
     |  |||| ||| | ||| |||| ||||||||| |||  |||||||||||||||||||| ||||| ||||| ||||| |||||||| ||| ||| ||||     
T  32930022 tagaggattttccttctcctcttattctctctaaggttggtttttctattgttttgtaacgatgtttgttgtcatgtacaactaaacctcttttaattaa 32929923  T
Q  417 ggttctacgatgaacctcttcttatttgttggatttcatta 457  Q
    ||||| | ||||||| ||||||||||| |||||||| ||||    
T  32929922 ggttcaaagatgaacttcttcttatttcttggatttaatta 32929882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 451
Target Start/End: Complemental strand, 13830539 - 13830321
Alignment:
Q  237 aaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctct 336  Q
    ||||| |||||| |||| ||  ||||||||||||| |||| | |||||| |||||||||||||| |||   |  | ||||| |  |||||| |||||||     
T  13830539 aaataaagacccttgcacacacttttattcattcataaagtttgtggtataaggcaagggtcaaacattagagttccaaggaaggggatctccatcctcc 13830440  T
Q  337 tctttttctctctagggtatg---tttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacc 432  Q
    |||| ||||||||||||||||   ||||| |||| ||||||||||||||||||| ||||||| |||||||  ||| || ||||| ||||||| || ||||    
T  13830439 tcttgttctctctagggtatgatttttttttattattttgtaatgatgtatgttaccatgtgtaactaaacatctcttcattagcgttctactataaacc 13830340  T
Q  433 tcttcttatttgttggatt 451  Q
    ||| |||||||||||||||    
T  13830339 tctacttatttgttggatt 13830321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 261 - 459
Target Start/End: Original strand, 16528157 - 16528340
Alignment:
Q  261 ttattcattcagaaagctagtggtagaaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttt 360  Q
    ||||||||| ||||||||||| ||  |||| ||||||||||||| | |  | |||||||  |||||||||||||| |||| |||||||||||||||||||    
T  16528157 ttattcatttagaaagctagttgttcaaggaaagggtcaagcattggagttccaaggcagaggatcttcatcctcctcttgttctctctagggtatgttt 16528256  T
Q  361 ttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    || ||||||||||| ||||||| | ||| |||||||||||               |||||||| |||||||| ||||||||||||||||||||||||||    
T  16528257 ttgtattgttttgttatgatgtctattgtcatgtgcaact---------------gggttctaagatgaaccccttcttatttgttggatttcattaat 16528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 9725712 - 9725597
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||| ||| |||||||||||||||||||||||| ||||||| ||||| |||| |||| |||| ||| ||||||||||||| |||||||||| ||||||||    
T  9725712 ttctttcttgggtatgtttttctattgttttgttatgatgtctgttgtcatgagcaattaaacctc-ttgattagggttccacgatgaaccccttcttat 9725614  T
Q  442 ttgttggatttcattaa 458  Q
    |||||||| || |||||    
T  9725613 ttgttggaatttattaa 9725597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 9396264 - 9396013
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtcaagcatcg 306  Q
    ||||||||||  |||| ||| ||||| || ||||| |||| | |||| ||  | ||||||||||| |||| |||||||| ||||||||||||||||||      
T  9396264 tctcttaaaccttaagaaatgatgcactataaatatagactcgtgcacacactcttattcattcaaaaagatagtggtacaaggcaagggtcaagcatta 9396165  T
Q  307 caacttcaaggcaatggatcttcatcctcttc------tttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaact 400  Q
     | |||||||| |  |||| ||| ||||| ||      || ||||||  ||| |||||||||| |||||||| |||||||||  ||||||||||| ||||    
T  9396164 gagcttcaaggtagaggattttcctcctcctcctcctcttgttctcttcaggatatgtttttcaattgttttataatgatgtcggttgccatgtgaaact 9396065  T
Q  401 aaaactct-ttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||| |||| ||||||| ||||| | ||||||| |||||||| ||||||||||    
T  9396064 aaacctctcttgattatggttccaagatgaacatcttcttaattgttggatt 9396013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 16174900 - 16174770
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggtt 420  Q
    |||| |||| ||||||||| ||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||| |||| ||||||||| ||    
T  16174900 ggatgttcaccctcttcttgttctctctacggtatatttttctattattttataatgatgtatgttaccatgtgcaactaaatctctcttgattaggatt 16174801  T
Q  421 ctacgatgaacctcttcttatttgttggatt 451  Q
    | |  |||| ||  ||||||||| |||||||    
T  16174800 ccaatatgacccctttcttatttcttggatt 16174770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 447
Target Start/End: Complemental strand, 30235907 - 30235794
Alignment:
Q  331 tcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaa 430  Q
    ||||| |||| |||||||||||||||||||||||||||||||   ||||||||||||| | || ||||||||| | ||||||| ||||||||| ||||||    
T  30235907 tcctcctcttgttctctctagggtatgtttttctattgtttt---atgatgtatgttgtcttgagcaactaaaccactttgatcagggttctaagatgaa 30235811  T
Q  431 cctcttcttatttgttg 447  Q
    |   |||||||||||||    
T  30235810 ctcattcttatttgttg 30235794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 447
Target Start/End: Original strand, 30756223 - 30756332
Alignment:
Q  342 ttctctctagggtatgtttttct---attgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttc 437  Q
    |||||||||| ||||||||||||   |||||||||||||||||||||||| |||||||||||||| || | ||||||||||||| | ||| ||||| ||     
T  30756223 ttctctctagtgtatgtttttcttgtattgttttgtaatgatgtatgttgtcatgtgcaactaaacctttcttgattagggttccaagataaacctattt 30756322  T
Q  438 ttatttgttg 447  Q
    ||||||||||    
T  30756323 ttatttgttg 30756332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 451
Target Start/End: Complemental strand, 13723387 - 13723285
Alignment:
Q  349 tagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgg 448  Q
    |||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||| |  ||||||| ||||||||||||||| |   |||||||| ||||    
T  13723387 tagggtatatttttctattgttttgttatgatgtttgttgtcatgtgcaactaaatcaatttgatttgggttctacgatgaatccaatcttattttttgg 13723288  T
Q  449 att 451  Q
    |||    
T  13723287 att 13723285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 15575532 - 15575629
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttctta 440  Q
    |||||||| ||||||||| |||||||||||| | ||||||| |||||||||| ||||||||  ||| ||||||||||||| |||||||||| |||||||    
T  15575532 ttctctcttgggtatgttattctattgttttcttatgatgtttgttgccatgagcaactaagcctc-ttgattagggttccacgatgaaccccttctta 15575629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 19670141 - 19670033
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    ||||||||||||||||||||| |||| |||||| ||||| | ||||| |||| ||||||||| ||||||| ||||| ||||| |||||||| ||| || |    
T  19670141 ttctctctagggtatgtttttatattattttgttatgatttttgttgtcatgagcaactaaacctctttgtttaggattctaagatgaacc-cttatttt 19670043  T
Q  442 ttgttggatt 451  Q
    ||||||||||    
T  19670042 ttgttggatt 19670033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 451
Target Start/End: Complemental strand, 12971903 - 12971778
Alignment:
Q  323 gatcttcatcctcttctttttctctctagggtatgtttt--tctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggtt 420  Q
    ||||||||||||| |||| ||||||||| |||||||| |  |||||||| ||||||||||| ||||| |||||||||||||||     |||||| |||||    
T  12971903 gatcttcatcctcctcttgttctctctatggtatgttatattctattgtattgtaatgatgcatgttcccatgtgcaactaaa-----ttgattcgggtt 12971809  T
Q  421 ctacgatgaacctcttcttatttgttggatt 451  Q
    | | ||| || | ||||||||||||||||||    
T  12971808 ccatgataaatcccttcttatttgttggatt 12971778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 456
Target Start/End: Original strand, 28178544 - 28178689
Alignment:
Q  311 ttcaaggcaatggatcttcatcctcttctttttctctctagggtatgttttt-ctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctt 409  Q
    ||||||||||  ||||| ||||||| |||| ||||||||||| ||||||||| ||||| |||||||| ||||    |||||||  |||||||||  | ||    
T  28178544 ttcaaggcaaaagatctacatcctcctcttattctctctagg-tatgttttttctatttttttgtaaagatgccgattgccattagcaactaaacttttt 28178642  T
Q  410 tgattagggttctacgatgaacctcttcttatttgttggatttcatt 456  Q
    | |||||| ||| |||||||| | |||||||||||||||||||||||    
T  28178643 ttattaggtttccacgatgaaacccttcttatttgttggatttcatt 28178689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 15349303 - 15349415
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||||||||||||||||| |||||||||||  ||||   ||| || ||  |||||||| ||||| ||||||||||  || ||||||||||||||||    
T  15349303 ttctctctagggtatgtttttcaattgttttgtagcgatg---gtttccgtgcccaactaaacctcttcgattagggtttcacaatgaacctcttcttat 15349399  T
Q  442 ttgttggatttcatta 457  Q
    ||||| ||||| ||||    
T  15349400 ttgtttgatttaatta 15349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 15376023 - 15376140
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||| |||||   ||||||| ||||||||||| ||||  ||  |||||| |||||| |    
T  15376023 ttctctctagggtatgtttttcaattgttttgaaatgatgttggtttccatgccaaactaaacctctttgattatggtttcacactgaaccccttcttct 15376122  T
Q  442 ttgttggatttcattaat 459  Q
    ||| ||||||| ||||||    
T  15376123 ttgatggatttaattaat 15376140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 452
Target Start/End: Original strand, 15369299 - 15369406
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||||| ||||||||||| |||||||||||  ||||   ||| ||||| ||||||||| | ||| ||||||||||  || ||||||||||||||||    
T  15369299 ttctctctagagtatgtttttcaattgttttgtagcgatg---gtttccatgcgcaactaaaccccttcgattagggtttcacaatgaacctcttcttat 15369395  T
Q  442 ttgttggattt 452  Q
    ||||| |||||    
T  15369396 ttgtttgattt 15369406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 15319421 - 15319531
Alignment:
Q  349 tagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttgg 448  Q
    ||||||||  ||||| ||||||||||||||||||  ||| |||||| ||| ||||  | |||||||||||||| | ||| |||| ||||||| |||||||    
T  15319421 tagggtatacttttcaattgttttgtaatgatgtcggtttccatgtccaattaaacttgtttgattagggttccatgattaaccccttcttacttgttgg 15319520  T
Q  449 atttcattaat 459  Q
    |||| ||||||    
T  15319521 atttaattaat 15319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 16439934 - 16440044
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactct-ttgattagggttctacgatgaacctcttctta 440  Q
    ||||||| ||| ||||||||| |||| ||||||||| |||| |||||||||||| || |||| |||| | || |||| ||  | ||||||||||||||||    
T  16439934 ttctctccaggatatgtttttatattattttgtaataatgtttgttgccatgtgaaattaaacctctatcgaataggatttcaagatgaacctcttctta 16440033  T
Q  441 tttgttggatt 451  Q
    |||||||||||    
T  16440034 tttgttggatt 16440044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 459
Target Start/End: Original strand, 15370060 - 15370171
Alignment:
Q  348 ctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttg 447  Q
    |||||||||  ||||| ||||||||||||||||||  ||| |||| | ||| ||||  | |||||||| ||||| | ||| |||| ||||||||||||||    
T  15370060 ctagggtatacttttcaattgttttgtaatgatgtcggtttccatatccaattaaacttgtttgattatggttccatgattaaccccttcttatttgttg 15370159  T
Q  448 gatttcattaat 459  Q
    ||||| ||||||    
T  15370160 gatttaattaat 15370171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 459
Target Start/End: Original strand, 15386496 - 15386608
Alignment:
Q  347 tctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgtt 446  Q
    ||||||||||  ||||| ||||||||| ||||||||  ||| | ||||  |||||||  | || |||| |||||| | ||| ||||||||||||||||||    
T  15386496 tctagggtatacttttcaattgttttgcaatgatgtcggtttctatgtcgaactaaacttgttagattcgggttccatgattaacctcttcttatttgtt 15386595  T
Q  447 ggatttcattaat 459  Q
    |||||| ||||||    
T  15386596 ggatttaattaat 15386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 459
Target Start/End: Complemental strand, 1558394 - 1558248
Alignment:
Q  312 tcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttg 411  Q
    ||||||||  ||||||||||| || |||| || |||||||| ||| |||||||||| ||||||||||||||  ||| |||||  ||| |||   ||||||    
T  1558394 tcaaggcagaggatcttcatcatcctcttgttatctctaggatatatttttctattattttgtaatgatgtcggtttccatgaacaaataatcttctttg 1558295  T
Q  412 attagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||| |||||    ||||||| |||||||||| || ||||| ||||||    
T  1558294 attaaggttccttcatgaacc-cttcttattttttagatttgattaat 1558248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 459
Target Start/End: Original strand, 15382216 - 15382393
Alignment:
Q  287 aaggcaagggtcaagcatcgcaa-cttcaaggcaatggatcttcatcctcttcttttt--ctctctagggtatgtttttctattgttttgta--atgatg 381  Q
    |||||||||||||||||||   | ||||||||||   ||||||||||||| ||||||   |||||||||||||||||||| ||||||||| |  ||||||    
T  15382216 aaggcaagggtcaagcatcaagagcttcaaggcagacgatcttcatcctcctcttttatactctctagggtatgtttttcaattgttttgaaatatgatg 15382315  T
Q  382 tatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
       ||| |||||   |||||||  |||||||||| | ||| || ||||||| ||||||  ||| ||||||| ||||||    
T  15382316 ctggtttccatgctaaactaaacatctttgattatgattccacaatgaaccccttcttcattgatggatttaattaat 15382393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 17198469 - 17198379
Alignment:
Q  207 tctcttaaactctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggt 297  Q
    |||||||| | ||||||||| ||| |||  |||||||||||| |||||||| ||||||||||| | ||| |||| | || |||||||||||    
T  17198469 tctcttaacccctaagtaatgatgtattctaaatagagacccttgcatactcttttattcatttataaaactagcgatacaaggcaagggt 17198379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 458
Target Start/End: Original strand, 25939700 - 25939746
Alignment:
Q  412 attagggttctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    |||||||||| |||||||||| |||||||||||||||| ||||||||    
T  25939700 attagggttccacgatgaaccccttcttatttgttggaattcattaa 25939746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 507
Target Start/End: Original strand, 1130292 - 1130325
Alignment:
Q  474 gtttatgatctaaagtctgatttaatttgtatat 507  Q
    ||||||||||||||||||||||||||||||||||    
T  1130292 gtttatgatctaaagtctgatttaatttgtatat 1130325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 346 - 459
Target Start/End: Original strand, 15376317 - 15376430
Alignment:
Q  346 ctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgt 445  Q
    |||||||||||  ||||| ||||||||||||||||||  ||| |||| |  |||||||  | | |||||||||||  | ||| |||| ||||||||||||    
T  15376317 ctctagggtatacttttcaattgttttgtaatgatgttggtttccatatcgaactaaacttgtctgattagggtttcaagattaaccacttcttatttgt 15376416  T
Q  446 tggatttcattaat 459  Q
    | ||||| ||||||    
T  15376417 tagatttaattaat 15376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 285
Target Start/End: Original strand, 28178497 - 28178527
Alignment:
Q  255 actattttattcattcagaaagctagtggta 285  Q
    |||||||||||||||||||||||||||||||    
T  28178497 actattttattcattcagaaagctagtggta 28178527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 15318654 - 15318687
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgta 375  Q
    |||||||||||||||||||||| |||||||||||    
T  15318654 ttctctctagggtatgtttttcaattgttttgta 15318687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 449
Target Start/End: Original strand, 21907318 - 21907366
Alignment:
Q  401 aaaactctttgattagggttctacgatgaacctcttcttatttgttgga 449  Q
    |||||| |||||||| ||||||| |||||||||||  ||||||||||||    
T  21907318 aaaactttttgattatggttctaagatgaacctctatttatttgttgga 21907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 218 - 458
Target Start/End: Original strand, 3606 - 3849
Alignment:
Q  218 ctaagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaaggg-tca-agcatcg-caacttca 314  Q
    ||||||||| ||||| || |||||||||||| |||| |||| |||||||||||| ||| |||| |||| | || ||||| ||| ||||||  |  |||||    
T  3606 ctaagtaattatgcactataaatagagacccttgcacactagtttattcattcataaaactagcggtacagggtaaggggtcagagcatcatcggcttca 3705  T
Q  315 aggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgatt 414  Q
    | |||  |||||| ||||||| |||| |||||||||| | ||| ||||||||| ||||||||||||||  ||| ||||| ||||| |||  |||||| ||    
T  3706 aagcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggttaccatgagcaaccaaacttctttgttt 3805  T
Q  415 agggttctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    | ||||| | ||||||||||||||||||||||||||| ||||||    
T  3806 atggttccaagatgaacctcttcttatttgttggattccattaa 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 220 - 458
Target Start/End: Original strand, 12741 - 12982
Alignment:
Q  220 aagtaataatgcattacaaatagagacccatgcatactattttattcattcagaaagctagtggtagaaggcaagggtc--aagcatcg-caacttcaag 316  Q
    ||||||| ||||| || |||||||||||| |||| || | ||||||||||||||||||||| |||| |||||||||||   |||||||  |  ||||||     
T  12741 aagtaattatgcactataaatagagacccttgcacaccagtttattcattcagaaagctagcggtacaaggcaagggttcaaagcatcatcggcttcaaa 12840  T
Q  317 gcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattag 416  Q
    |||  |||||| ||||||| |||| |||||||||| | ||| ||||||||| ||||||||||||||  ||| ||||| ||||| |||  | |||| |||     
T  12841 gcagaggatctccatcctcctcttgttctctctagagaatgattttctattattttgtaatgatgtcggtttccatgagcaaccaaacttgtttgtttat 12940  T
Q  417 ggttctacgatgaacctcttcttatttgttggatttcattaa 458  Q
    ||||| || |||| || |||||||||||||||||| ||||||    
T  12941 ggttccacaatgagccacttcttatttgttggattccattaa 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 37572 - 37688
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||||||||| |||||||||| ||| | |||||||||| | |||||||| ||||||||    
T  37572 ttctctctagggtatgtttttcaattgttttgtaatgacgtcggttgccatgggcaactaaaattctcttattagggttccatgatgaaccccttcttat 37671  T
Q  442 ttgttggatttcattaa 458  Q
     ||| ||||||||||||    
T  37672 gtgtaggatttcattaa 37688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 2546 - 2433
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttg 444  Q
    ||||||||||||| ||||||||| |||| | ||||| |||||||||||| ||||||||| ||| ||||||||||||| || ||||||| |||||||||||    
T  2546 tctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacctc-ttgattagggttccacaatgaaccccttcttatttg 2448  T
Q  445 ttggatttcattaat 459  Q
    ||||| || ||||||    
T  2447 ttggaatttattaat 2433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 2711 - 2598
Alignment:
Q  345 tctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttg 444  Q
    ||||||||||||| ||||||||| |||| | ||||| |||||||||||| ||||||||| ||| ||||||||||||| || ||||||| |||||||||||    
T  2711 tctctagggtatgattttctattattttcttatgatatatgttgccatgagcaactaaacctc-ttgattagggttccacaatgaaccccttcttatttg 2613  T
Q  445 ttggatttcattaat 459  Q
    ||||| || ||||||    
T  2612 ttggaatttattaat 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 33272 - 33163
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||||||| |||| |||||||||||||||||||||||||  |||||||||   ||||||  ||||||||||||||||| | |||||| | ||||||||    
T  33272 ttctctctagagtatctttttctattgttttgtaatgatgtcggttgccatgataaactaatcctctttgattagggttccatgatgaagcccttcttat 33173  T
Q  442 ttgttggatt 451  Q
    ||||||||||    
T  33172 ttgttggatt 33163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 450
Target Start/End: Complemental strand, 5315 - 5156
Alignment:
Q  287 aaggcaagggtcaagcatcgcaacttcaaggcaatggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgtaatgatgtatgt 386  Q
    |||||||||||||||||||  | ||||||||||  |||| ||| || |  |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  5315 aaggcaagggtcaagcatcagagcttcaaggca--ggat-ttcttcattctcttgttctctctaggatatgtttttctattgttttgttatgatgtatgt 5219  T
Q  387 tgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggat 450  Q
    || |||| |||||| |||||  |||||||| |||  | |||||||| ||||| |||||||||||    
T  5218 tgtcatgagcaact-aaacttcttgattagagtttcatgatgaaccacttctgatttgttggat 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 447
Target Start/End: Original strand, 8239 - 8348
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||||||||||| ||||||||||||||  | ||||||| |||||| ||| ||||||||| ||| || |||||||||| | |||||||| |||    
T  8239 tcttgttctctctagggtatttttttctattgtttcattatgatgtttgttgctatgagcaactaaacctc-ttaattagggttccaagatgaacccctt 8337  T
Q  437 cttatttgttg 447  Q
    |||||||||||    
T  8338 cttatttgttg 8348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 4717 - 4614
Alignment:
Q  355 atgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatttca 454  Q
    |||||||||||||||||||||||||||| |||| ||| |  |||||||| || |||||||| ||||||| ||||||||  ||||||||||||| |||| |    
T  4717 atgtttttctattgttttgtaatgatgtttgttaccacgaacaactaaacctttttgatta-ggttctaagatgaaccatttcttatttgttgaatttta 4619  T
Q  455 ttaat 459  Q
    |||||    
T  4618 ttaat 4614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 22151 - 22030
Alignment:
Q  337 tctttttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctctt 436  Q
    |||| ||||||| ||||||| | ||| ||||||||||| ||||| ||||||||||||  |||||||| ||| ||||| | ||||| | |||||||| | |    
T  22151 tcttattctctccagggtatatatttttattgttttgttatgatttatgttgccatgaacaactaaacctc-ttgatcatggttccatgatgaaccccat 22053  T
Q  437 cttatttgttggatttcattaat 459  Q
    |||||||||||||| | ||||||    
T  22052 cttatttgttggatattattaat 22030  T

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Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 460
Target Start/End: Complemental strand, 37104 - 36987
Alignment:
Q  342 ttctctctagggtatgtttttctattgttttgtaatgatgtatgttgccatgtgcaactaaaactctttgattagggttctacgatgaacctcttcttat 441  Q
    |||||| ||||||||||| |||||||||||| | | ||||  ||||| |||| ||||||||| || |||||||||||||| || || | ||| |||||||    
T  37104 ttctctatagggtatgttcttctattgttttcttacgatgcttgttggcatgagcaactaaa-ctttttgattagggttccacaataagcctgttcttat 37006  T
Q  442 ttgttggatttcattaatt 460  Q
    |||||||| || |||||||    
T  37005 ttgttggagtttattaatt 36987  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 6787 - 6844
Alignment:
Q  394 tgcaactaaaactctttgattagggttctacgatgaacctcttcttatttgttggatt 451  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  6787 tgcaattaaaactctttgattagggctctaagatgaaccccttcttatttgttggatt 6844  T

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Target: scaffold0171; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 21972 - 22026
Alignment:
Q  405 ctctttgattagggttctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    |||||||||||  |||||| |||||||| ||||| |||||||||||| |||||||    
T  21972 ctctttgattatagttctaagatgaaccccttctaatttgttggattccattaat 22026  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 459
Target Start/End: Complemental strand, 227746 - 227607
Alignment:
Q  322 ggatcttcatcctcttctttttctctctagggtatgtttttctattgttttgt--aatgatgtatgttgccatgtgcaactaaaactctttgattagggt 419  Q
    |||||| ||||||| |||| |||||||||| ||||||||||| ||||||||||   |||||||  ||| ||||| |||| |  |  ||||||| ||||||    
T  227746 ggatctccatcctcctcttgttctctctagagtatgtttttcaattgttttgttatatgatgtcggtttccatgagcaaatgcacttctttgagtagggt 227647  T
Q  420 tctacgatgaacctcttcttatttgttggatttcattaat 459  Q
    || | ||| |||| |||  |||||||| ||||||||||||    
T  227646 tccatgataaaccccttactatttgttagatttcattaat 227607  T

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Target: scaffold1668 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 642 - 694
Alignment:
Q  408 tttgattagggttctacgatgaacctcttcttatttgttggatttcattaatt 460  Q
    |||||||||||||||| ||| |||||||  |||||||||| |||| |||||||    
T  642 tttgattagggttctatgatcaacctctatttatttgttgaattttattaatt 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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