View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11754_low_11 (Length: 229)

Name: NF11754_low_11
Description: NF11754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11754_low_11
NF11754_low_11
[»] chr6 (63 HSPs)
chr6 (12-229)||(18907107-18907324)
chr6 (12-229)||(20907885-20908102)
chr6 (12-187)||(16523330-16523504)
chr6 (12-160)||(21766691-21766839)
chr6 (79-229)||(21834793-21834941)
chr6 (12-229)||(18180490-18180705)
chr6 (27-217)||(27567525-27567715)
chr6 (30-229)||(22408208-22408406)
chr6 (12-229)||(15894332-15894559)
chr6 (38-210)||(17804216-17804380)
chr6 (39-229)||(19790682-19790873)
chr6 (38-172)||(27325569-27325705)
chr6 (26-168)||(22074176-22074319)
chr6 (104-207)||(23414721-23414824)
chr6 (104-207)||(27556479-27556582)
chr6 (38-203)||(22429960-22430117)
chr6 (38-203)||(25767098-25767255)
chr6 (110-207)||(31478072-31478169)
chr6 (110-207)||(1644455-1644552)
chr6 (146-229)||(21739925-21740008)
chr6 (104-207)||(27416120-27416223)
chr6 (41-229)||(23657324-23657513)
chr6 (40-229)||(22862967-22863148)
chr6 (40-184)||(1644726-1644863)
chr6 (12-226)||(25642089-25642308)
chr6 (104-229)||(14472347-14472472)
chr6 (48-184)||(8243890-8244019)
chr6 (48-184)||(11566891-11567020)
chr6 (123-226)||(19863089-19863193)
chr6 (48-184)||(19870619-19870748)
chr6 (123-226)||(19873231-19873335)
chr6 (48-184)||(23395097-23395226)
chr6 (140-207)||(16760072-16760139)
chr6 (12-160)||(15041522-15041671)
chr6 (104-183)||(16760370-16760446)
chr6 (104-183)||(31477765-31477841)
chr6 (105-184)||(18917214-18917294)
chr6 (12-92)||(21740072-21740152)
chr6 (123-183)||(22949199-22949259)
chr6 (123-183)||(22953155-22953215)
chr6 (123-183)||(23871643-23871703)
chr6 (123-183)||(23875599-23875659)
chr6 (48-184)||(23989949-23990078)
chr6 (12-92)||(27553612-27553692)
chr6 (48-184)||(12618793-12618921)
chr6 (140-203)||(22948885-22948948)
chr6 (140-203)||(22952841-22952904)
chr6 (140-203)||(23871329-23871392)
chr6 (140-203)||(23875285-23875348)
chr6 (104-183)||(16624207-16624283)
chr6 (104-184)||(18955711-18955792)
chr6 (148-226)||(22438936-22439015)
chr6 (140-192)||(14472048-14472100)
chr6 (119-210)||(16741298-16741389)
chr6 (140-192)||(18956040-18956092)
chr6 (46-89)||(12496336-12496379)
chr6 (140-183)||(16624438-16624481)
chr6 (14-93)||(19873118-19873197)
chr6 (148-226)||(22432386-22432465)
chr6 (116-191)||(27553531-27553606)
chr6 (12-93)||(19862974-19863055)
chr6 (38-86)||(12706709-12706757)
chr6 (39-95)||(19848033-19848089)
[»] chr1 (47 HSPs)
chr1 (16-229)||(22449169-22449382)
chr1 (12-226)||(18182027-18182241)
chr1 (12-217)||(3472840-3473043)
chr1 (26-229)||(8761536-8761740)
chr1 (12-229)||(17678491-17678706)
chr1 (33-217)||(3704980-3705164)
chr1 (16-229)||(24783004-24783209)
chr1 (12-226)||(21787948-21788163)
chr1 (12-174)||(33049984-33050146)
chr1 (39-229)||(45489646-45489837)
chr1 (39-229)||(18393867-18394059)
chr1 (110-207)||(20229071-20229168)
chr1 (146-229)||(6151988-6152071)
chr1 (142-229)||(21022767-21022854)
chr1 (104-207)||(33797358-33797461)
chr1 (149-229)||(42865114-42865195)
chr1 (39-185)||(22468644-22468790)
chr1 (146-229)||(22831281-22831363)
chr1 (38-210)||(36819231-36819396)
chr1 (39-229)||(45310270-45310462)
chr1 (38-210)||(16080367-16080531)
chr1 (40-229)||(1010744-1010925)
chr1 (40-184)||(20228757-20228894)
chr1 (48-184)||(16375406-16375535)
chr1 (48-184)||(21407384-21407513)
chr1 (12-90)||(21022627-21022705)
chr1 (104-183)||(1925084-1925160)
chr1 (104-183)||(20924098-20924174)
chr1 (104-184)||(52639618-52639699)
chr1 (12-92)||(6151844-6151924)
chr1 (123-226)||(21714659-21714763)
chr1 (123-183)||(39244096-39244156)
chr1 (123-183)||(39247651-39247711)
chr1 (123-183)||(41388196-41388256)
chr1 (140-207)||(1925391-1925458)
chr1 (140-207)||(20924405-20924472)
chr1 (15-70)||(22831449-22831504)
chr1 (12-93)||(42865253-42865334)
chr1 (104-210)||(19211943-19212050)
chr1 (140-183)||(39243898-39243941)
chr1 (140-183)||(39247453-39247496)
chr1 (39-160)||(20135214-20135336)
chr1 (12-89)||(20091520-20091597)
chr1 (120-226)||(20091379-20091486)
chr1 (38-86)||(20138103-20138151)
chr1 (104-210)||(23819222-23819329)
chr1 (140-172)||(41388014-41388046)
[»] chr7 (53 HSPs)
chr7 (14-229)||(12321645-12321860)
chr7 (12-229)||(14429879-14430095)
chr7 (12-185)||(9751703-9751875)
chr7 (16-185)||(2832389-2832558)
chr7 (12-217)||(9446074-9446279)
chr7 (12-185)||(39267847-39268020)
chr7 (12-229)||(3271819-3272036)
chr7 (26-229)||(2760141-2760344)
chr7 (38-210)||(11312667-11312831)
chr7 (38-210)||(12318146-12318310)
chr7 (39-210)||(20569518-20569690)
chr7 (38-210)||(13635392-13635556)
chr7 (38-229)||(15580710-15580893)
chr7 (38-210)||(15605195-15605360)
chr7 (104-207)||(13918706-13918809)
chr7 (111-205)||(25927431-25927525)
chr7 (40-207)||(1859012-1859169)
chr7 (40-184)||(39722287-39722424)
chr7 (38-210)||(16583275-16583438)
chr7 (104-169)||(7519322-7519387)
chr7 (40-229)||(70669-70850)
chr7 (40-229)||(74778-74959)
chr7 (48-184)||(12714893-12715022)
chr7 (48-184)||(12718697-12718826)
chr7 (48-184)||(16114270-16114399)
chr7 (48-184)||(16117423-16117552)
chr7 (48-184)||(16907149-16907278)
chr7 (48-184)||(18283395-18283524)
chr7 (40-184)||(26292416-26292553)
chr7 (140-207)||(15083973-15084040)
chr7 (104-229)||(33184-33309)
chr7 (104-184)||(18279480-18279561)
chr7 (104-183)||(45169961-45170037)
chr7 (148-226)||(9703401-9703480)
chr7 (117-184)||(12723670-12723737)
chr7 (140-207)||(39722043-39722110)
chr7 (140-203)||(45170272-45170335)
chr7 (104-172)||(18425513-18425578)
chr7 (39-172)||(42204017-42204151)
chr7 (104-184)||(12704607-12704688)
chr7 (12-92)||(17138101-17138181)
chr7 (123-226)||(18154742-18154846)
chr7 (104-207)||(2530316-2530420)
chr7 (12-226)||(19649390-19649610)
chr7 (12-75)||(12187015-12187078)
chr7 (148-226)||(24054603-24054682)
chr7 (38-86)||(19096-19144)
chr7 (38-86)||(9593365-9593413)
chr7 (104-210)||(9593421-9593528)
chr7 (104-210)||(9644384-9644491)
chr7 (38-86)||(11987231-11987279)
chr7 (140-172)||(18425748-18425780)
chr7 (140-172)||(18425948-18425980)
[»] scaffold0346 (1 HSPs)
scaffold0346 (12-229)||(15083-15299)
[»] chr8 (47 HSPs)
chr8 (12-229)||(30643194-30643412)
chr8 (12-226)||(20465945-20466161)
chr8 (26-229)||(15602920-15603123)
chr8 (12-229)||(17926610-17926826)
chr8 (26-229)||(15611372-15611575)
chr8 (26-225)||(16410162-16410360)
chr8 (12-200)||(16861258-16861445)
chr8 (26-229)||(22010582-22010781)
chr8 (12-226)||(23776741-23776956)
chr8 (12-229)||(24755710-24755937)
chr8 (12-229)||(20856328-20856545)
chr8 (149-229)||(377414-377494)
chr8 (12-195)||(39094861-39095045)
chr8 (104-207)||(14398035-14398138)
chr8 (149-229)||(19259485-19259565)
chr8 (134-229)||(16184848-16184944)
chr8 (149-226)||(19983228-19983306)
chr8 (149-226)||(19899230-19899308)
chr8 (40-184)||(43251834-43251971)
chr8 (12-92)||(377267-377347)
chr8 (48-184)||(19278231-19278360)
chr8 (48-184)||(21972533-21972662)
chr8 (48-184)||(21976618-21976747)
chr8 (140-207)||(21828276-21828343)
chr8 (104-183)||(18862600-18862676)
chr8 (40-176)||(21383675-21383801)
chr8 (104-183)||(21827969-21828045)
chr8 (104-184)||(22111928-22112009)
chr8 (140-203)||(18862911-18862974)
chr8 (104-183)||(21387149-21387228)
chr8 (140-207)||(21410727-21410794)
chr8 (140-207)||(21805219-21805286)
chr8 (146-226)||(21168627-21168708)
chr8 (104-178)||(21411025-21411096)
chr8 (104-178)||(21805517-21805588)
chr8 (39-160)||(18678074-18678196)
chr8 (39-160)||(32121759-32121881)
chr8 (12-92)||(16184716-16184796)
chr8 (104-210)||(16231398-16231505)
chr8 (12-92)||(17353984-17354064)
chr8 (12-92)||(21162099-21162179)
chr8 (12-92)||(21168772-21168852)
chr8 (39-189)||(23648580-23648730)
chr8 (117-210)||(22028647-22028740)
chr8 (190-226)||(21161964-21162000)
chr8 (104-210)||(22044960-22045067)
chr8 (38-90)||(16231509-16231561)
[»] scaffold0761 (1 HSPs)
scaffold0761 (12-229)||(6212-6429)
[»] scaffold0676 (2 HSPs)
scaffold0676 (12-226)||(4426-4640)
scaffold0676 (104-183)||(526-602)
[»] scaffold0425 (1 HSPs)
scaffold0425 (12-229)||(155-373)
[»] scaffold1296 (1 HSPs)
scaffold1296 (12-229)||(389-606)
[»] scaffold0080 (1 HSPs)
scaffold0080 (12-226)||(18562-18778)
[»] chr5 (47 HSPs)
chr5 (12-229)||(21366569-21366785)
chr5 (16-185)||(24767493-24767662)
chr5 (12-217)||(24221873-24222078)
chr5 (12-229)||(20766970-20767185)
chr5 (12-229)||(20805548-20805763)
chr5 (12-229)||(23451344-23451559)
chr5 (12-181)||(1858929-1859097)
chr5 (12-229)||(23458588-23458803)
chr5 (12-229)||(23462849-23463064)
chr5 (39-229)||(22757148-22757339)
chr5 (39-229)||(123209-123399)
chr5 (39-229)||(12028468-12028659)
chr5 (12-192)||(26680578-26680759)
chr5 (12-192)||(26952185-26952366)
chr5 (104-207)||(18356033-18356136)
chr5 (104-207)||(20911097-20911200)
chr5 (12-226)||(21873250-21873462)
chr5 (39-206)||(17919078-17919245)
chr5 (110-205)||(10753111-10753206)
chr5 (38-188)||(17410459-17410602)
chr5 (38-202)||(23535520-23535674)
chr5 (149-226)||(14079283-14079361)
chr5 (136-207)||(11225107-11225178)
chr5 (12-90)||(31342143-31342221)
chr5 (48-184)||(20295876-20296005)
chr5 (140-207)||(11220525-11220592)
chr5 (140-207)||(11228934-11229001)
chr5 (140-207)||(11230923-11230990)
chr5 (104-183)||(10753439-10753515)
chr5 (40-229)||(15236684-15236865)
chr5 (48-184)||(19472668-19472797)
chr5 (140-207)||(11226944-11227011)
chr5 (118-226)||(37724008-37724117)
chr5 (140-207)||(40723849-40723916)
chr5 (14-92)||(23572082-23572160)
chr5 (146-226)||(23201500-23201581)
chr5 (146-226)||(23501251-23501332)
chr5 (12-92)||(18770042-18770122)
chr5 (12-75)||(22032319-22032382)
chr5 (89-229)||(18356390-18356529)
chr5 (12-92)||(23201356-23201436)
chr5 (144-191)||(31342254-31342301)
chr5 (40-86)||(18355979-18356025)
chr5 (12-70)||(23501418-23501476)
chr5 (12-93)||(14079145-14079226)
chr5 (38-86)||(21340804-21340852)
chr5 (38-86)||(26742784-26742832)
[»] chr4 (46 HSPs)
chr4 (12-229)||(16487981-16488198)
chr4 (12-229)||(16356856-16357072)
chr4 (12-185)||(13812966-13813139)
chr4 (12-229)||(16348568-16348784)
chr4 (12-229)||(15353210-15353428)
chr4 (26-229)||(5338884-5339088)
chr4 (24-185)||(20157407-20157568)
chr4 (12-226)||(15093771-15093986)
chr4 (12-229)||(12570010-12570237)
chr4 (12-195)||(16351786-16351972)
chr4 (39-210)||(11250483-11250655)
chr4 (104-207)||(43256339-43256442)
chr4 (40-229)||(17810293-17810474)
chr4 (38-210)||(36133885-36134049)
chr4 (156-228)||(15125057-15125130)
chr4 (149-229)||(23843613-23843694)
chr4 (61-229)||(25555550-25555719)
chr4 (46-185)||(22634369-22634501)
chr4 (149-226)||(44675767-44675845)
chr4 (40-184)||(9556551-9556688)
chr4 (40-229)||(14757326-14757507)
chr4 (110-183)||(15224962-15225035)
chr4 (40-184)||(4561282-4561419)
chr4 (104-184)||(5756886-5756967)
chr4 (104-183)||(10712928-10713004)
chr4 (104-183)||(10926698-10926774)
chr4 (104-200)||(27534103-27534199)
chr4 (123-183)||(12487802-12487862)
chr4 (123-183)||(14954122-14954182)
chr4 (123-183)||(25689961-25690021)
chr4 (140-207)||(10712633-10712700)
chr4 (140-207)||(10926403-10926470)
chr4 (140-207)||(12487488-12487555)
chr4 (148-226)||(13569646-13569725)
chr4 (140-203)||(14954433-14954496)
chr4 (140-203)||(25689647-25689710)
chr4 (48-184)||(33742407-33742535)
chr4 (39-95)||(25555503-25555559)
chr4 (140-192)||(27533803-27533855)
chr4 (12-90)||(15121843-15121921)
chr4 (104-210)||(1951684-1951791)
chr4 (38-86)||(1951799-1951847)
chr4 (140-172)||(15225190-15225222)
chr4 (104-156)||(17152464-17152516)
chr4 (38-86)||(17152524-17152572)
chr4 (38-86)||(18222416-18222464)
[»] scaffold0035 (1 HSPs)
scaffold0035 (12-226)||(46633-46847)
[»] scaffold0393 (1 HSPs)
scaffold0393 (12-229)||(1490-1706)
[»] chr3 (77 HSPs)
chr3 (12-229)||(18383820-18384036)
chr3 (12-229)||(322588-322804)
chr3 (12-229)||(11851577-11851794)
chr3 (13-217)||(11862790-11862994)
chr3 (12-200)||(12037885-12038072)
chr3 (12-229)||(12496253-12496470)
chr3 (26-229)||(19725815-19726017)
chr3 (12-225)||(11298436-11298648)
chr3 (16-185)||(14665401-14665570)
chr3 (16-185)||(14668557-14668726)
chr3 (27-229)||(1982714-1982916)
chr3 (27-227)||(11557290-11557490)
chr3 (39-229)||(11595042-11595233)
chr3 (12-229)||(3389839-3390057)
chr3 (12-229)||(3402859-3403077)
chr3 (38-210)||(20461423-20461587)
chr3 (38-229)||(2897727-2897910)
chr3 (104-207)||(5223140-5223243)
chr3 (104-207)||(12339542-12339645)
chr3 (110-207)||(4589035-4589132)
chr3 (38-210)||(15482682-15482846)
chr3 (104-207)||(11300692-11300795)
chr3 (104-207)||(15464941-15465044)
chr3 (38-210)||(7793272-7793437)
chr3 (110-207)||(19775515-19775612)
chr3 (39-210)||(42325964-42326136)
chr3 (146-217)||(12172936-12173007)
chr3 (38-210)||(327087-327252)
chr3 (12-92)||(12172792-12172872)
chr3 (149-229)||(15060427-15060507)
chr3 (149-229)||(16909885-16909965)
chr3 (40-229)||(30065970-30066151)
chr3 (153-229)||(15051655-15051731)
chr3 (149-229)||(16369543-16369623)
chr3 (48-184)||(11165477-11165606)
chr3 (40-184)||(15617398-15617535)
chr3 (12-210)||(23052999-23053208)
chr3 (48-229)||(55022899-55023072)
chr3 (48-184)||(7109730-7109859)
chr3 (48-184)||(7113665-7113794)
chr3 (40-184)||(11070092-11070229)
chr3 (105-184)||(11300459-11300539)
chr3 (40-184)||(11854757-11854894)
chr3 (48-184)||(22336751-22336880)
chr3 (12-92)||(23077518-23077598)
chr3 (48-184)||(27409592-27409721)
chr3 (48-184)||(28949756-28949885)
chr3 (104-229)||(14499405-14499530)
chr3 (104-183)||(4111204-4111280)
chr3 (104-183)||(15965047-15965123)
chr3 (104-183)||(15968971-15969047)
chr3 (104-183)||(15972895-15972971)
chr3 (104-183)||(16750543-16750619)
chr3 (104-183)||(19775843-19775919)
chr3 (104-184)||(22321744-22321825)
chr3 (12-226)||(23408424-23408645)
chr3 (104-183)||(37439591-37439667)
chr3 (140-203)||(15964749-15964812)
chr3 (140-203)||(15968673-15968736)
chr3 (140-203)||(15972597-15972660)
chr3 (140-207)||(37439898-37439965)
chr3 (14-92)||(856138-856216)
chr3 (104-183)||(8489420-8489501)
chr3 (104-183)||(4107352-4107428)
chr3 (12-64)||(26196500-26196552)
chr3 (148-226)||(17525058-17525137)
chr3 (12-92)||(14878557-14878637)
chr3 (123-226)||(15877953-15878057)
chr3 (146-226)||(14878412-14878493)
chr3 (104-156)||(11854493-11854545)
chr3 (12-92)||(15878092-15878172)
chr3 (104-210)||(15850008-15850113)
chr3 (39-96)||(30029867-30029924)
chr3 (12-92)||(15060280-15060360)
chr3 (140-172)||(16749960-16749992)
chr3 (140-172)||(16750158-16750190)
chr3 (140-172)||(16750356-16750388)
[»] chr2 (42 HSPs)
chr2 (12-229)||(22811814-22812032)
chr2 (12-229)||(25963620-25963836)
chr2 (12-163)||(21916068-21916219)
chr2 (12-217)||(24655254-24655459)
chr2 (12-217)||(24174796-24175001)
chr2 (12-228)||(21327471-21327688)
chr2 (27-210)||(21318558-21318742)
chr2 (12-226)||(22799032-22799247)
chr2 (39-229)||(25961438-25961628)
chr2 (26-229)||(37524685-37524881)
chr2 (12-229)||(24716434-24716649)
chr2 (12-205)||(24869876-24870069)
chr2 (15-220)||(23019618-23019824)
chr2 (39-229)||(40428486-40428677)
chr2 (38-210)||(24735422-24735586)
chr2 (104-207)||(31344953-31345056)
chr2 (40-229)||(10101549-10101730)
chr2 (146-229)||(24673709-24673792)
chr2 (110-210)||(19688679-19688779)
chr2 (12-226)||(22740866-22741085)
chr2 (40-184)||(24649378-24649515)
chr2 (160-229)||(21918219-21918288)
chr2 (40-184)||(12901460-12901597)
chr2 (40-184)||(27379381-27379518)
chr2 (40-184)||(27383427-27383564)
chr2 (48-184)||(27601825-27601954)
chr2 (123-225)||(22758622-22758725)
chr2 (104-184)||(41530958-41531035)
chr2 (104-183)||(1283464-1283540)
chr2 (104-183)||(30344946-30345022)
chr2 (140-207)||(41531266-41531333)
chr2 (140-207)||(30345253-30345320)
chr2 (104-184)||(24628427-24628508)
chr2 (12-92)||(24673565-24673645)
chr2 (140-207)||(1283166-1283233)
chr2 (12-87)||(24680184-24680259)
chr2 (12-70)||(45678192-45678250)
chr2 (12-92)||(40622251-40622331)
chr2 (134-184)||(15477711-15477761)
chr2 (39-160)||(25616212-25616334)
chr2 (146-178)||(45678074-45678106)
chr2 (12-93)||(22758759-22758840)
[»] scaffold0216 (1 HSPs)
scaffold0216 (12-192)||(17051-17232)
[»] scaffold0124 (1 HSPs)
scaffold0124 (12-229)||(42623-42835)
[»] scaffold0476 (2 HSPs)
scaffold0476 (12-229)||(5581-5799)
scaffold0476 (12-229)||(6776-6994)
[»] scaffold1326 (1 HSPs)
scaffold1326 (26-229)||(1393-1596)
[»] scaffold0104 (2 HSPs)
scaffold0104 (12-229)||(1826-2042)
scaffold0104 (12-229)||(9509-9724)
[»] scaffold0615 (1 HSPs)
scaffold0615 (12-225)||(1991-2205)
[»] scaffold0550 (1 HSPs)
scaffold0550 (12-229)||(7467-7684)
[»] scaffold0367 (1 HSPs)
scaffold0367 (12-229)||(893-1109)
[»] scaffold0079 (1 HSPs)
scaffold0079 (12-229)||(44077-44293)
[»] scaffold0003 (2 HSPs)
scaffold0003 (12-229)||(413954-414171)
scaffold0003 (104-207)||(71138-71241)
[»] scaffold0001 (3 HSPs)
scaffold0001 (12-229)||(422435-422652)
scaffold0001 (104-210)||(173367-173473)
scaffold0001 (38-86)||(173311-173359)
[»] scaffold0022 (1 HSPs)
scaffold0022 (12-175)||(73725-73887)
[»] scaffold0037 (2 HSPs)
scaffold0037 (72-229)||(21472-21629)
scaffold0037 (110-207)||(80616-80713)
[»] scaffold0166 (1 HSPs)
scaffold0166 (16-185)||(9990-10159)
[»] scaffold0280 (1 HSPs)
scaffold0280 (26-229)||(19195-19399)
[»] scaffold0412 (1 HSPs)
scaffold0412 (26-229)||(6319-6521)
[»] scaffold0439 (2 HSPs)
scaffold0439 (12-229)||(2339-2557)
scaffold0439 (12-229)||(10199-10417)
[»] scaffold1052 (1 HSPs)
scaffold1052 (24-185)||(2913-3074)
[»] scaffold0096 (1 HSPs)
scaffold0096 (27-226)||(16255-16454)
[»] scaffold0327 (1 HSPs)
scaffold0327 (12-169)||(285-443)
[»] scaffold0023 (2 HSPs)
scaffold0023 (12-220)||(38391-38600)
scaffold0023 (104-220)||(23578-23695)
[»] scaffold0016 (1 HSPs)
scaffold0016 (46-207)||(207764-207927)
[»] scaffold1220 (1 HSPs)
scaffold1220 (26-229)||(1802-2004)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-229)||(30648-30863)
[»] scaffold0093 (1 HSPs)
scaffold0093 (12-226)||(4711-4925)
[»] scaffold0171 (1 HSPs)
scaffold0171 (39-229)||(35414-35605)
[»] scaffold0637 (1 HSPs)
scaffold0637 (39-229)||(8583-8774)
[»] scaffold0185 (1 HSPs)
scaffold0185 (26-163)||(33557-33695)
[»] scaffold0036 (1 HSPs)
scaffold0036 (38-210)||(66338-66502)
[»] scaffold0031 (4 HSPs)
scaffold0031 (38-210)||(53584-53748)
scaffold0031 (140-207)||(36348-36415)
scaffold0031 (104-183)||(36041-36117)
scaffold0031 (12-93)||(65838-65919)
[»] scaffold0042 (2 HSPs)
scaffold0042 (146-229)||(34813-34896)
scaffold0042 (12-92)||(34960-35040)
[»] scaffold0056 (1 HSPs)
scaffold0056 (12-229)||(13980-14207)
[»] scaffold0342 (1 HSPs)
scaffold0342 (39-229)||(7174-7364)
[»] scaffold0158 (4 HSPs)
scaffold0158 (146-229)||(2972-3055)
scaffold0158 (146-229)||(6638-6721)
scaffold0158 (12-91)||(2828-2907)
scaffold0158 (12-91)||(6494-6573)
[»] scaffold0051 (1 HSPs)
scaffold0051 (104-207)||(30960-31063)
[»] scaffold0311 (2 HSPs)
scaffold0311 (149-229)||(6981-7061)
scaffold0311 (12-92)||(7128-7208)
[»] scaffold0299 (1 HSPs)
scaffold0299 (104-207)||(6756-6859)
[»] scaffold0044 (2 HSPs)
scaffold0044 (38-208)||(12923-13085)
scaffold0044 (38-208)||(19207-19369)
[»] scaffold0017 (2 HSPs)
scaffold0017 (12-229)||(15113-15331)
scaffold0017 (12-229)||(19635-19853)
[»] scaffold0184 (1 HSPs)
scaffold0184 (39-229)||(4128-4320)
[»] scaffold0111 (3 HSPs)
scaffold0111 (149-228)||(32570-32650)
scaffold0111 (46-86)||(8527-8567)
scaffold0111 (46-86)||(15671-15711)
[»] scaffold0029 (5 HSPs)
scaffold0029 (40-184)||(65476-65613)
scaffold0029 (110-207)||(80462-80559)
scaffold0029 (40-184)||(61560-61697)
scaffold0029 (104-229)||(80790-80914)
scaffold0029 (14-92)||(12761-12839)
[»] scaffold0015 (1 HSPs)
scaffold0015 (12-229)||(192220-192438)
[»] scaffold0525 (1 HSPs)
scaffold0525 (40-229)||(3779-3960)
[»] scaffold0149 (2 HSPs)
scaffold0149 (149-225)||(3877-3954)
scaffold0149 (149-225)||(8308-8385)
[»] scaffold0293 (1 HSPs)
scaffold0293 (104-207)||(20391-20494)
[»] scaffold0109 (2 HSPs)
scaffold0109 (40-184)||(35891-36027)
scaffold0109 (140-207)||(36202-36269)
[»] scaffold0228 (1 HSPs)
scaffold0228 (38-210)||(18555-18719)
[»] scaffold0410 (2 HSPs)
scaffold0410 (39-172)||(2191-2325)
scaffold0410 (95-195)||(11457-11558)
[»] scaffold0349 (1 HSPs)
scaffold0349 (48-229)||(12451-12624)
[»] scaffold0372 (1 HSPs)
scaffold0372 (40-184)||(5049-5186)
[»] scaffold0297 (3 HSPs)
scaffold0297 (148-226)||(15575-15654)
scaffold0297 (12-75)||(10580-10643)
scaffold0297 (12-70)||(15742-15800)
[»] scaffold0013 (1 HSPs)
scaffold0013 (38-210)||(2596-2759)
[»] scaffold1895 (1 HSPs)
scaffold1895 (102-226)||(1133-1258)
[»] scaffold0177 (1 HSPs)
scaffold0177 (118-208)||(13412-13501)
[»] scaffold0120 (2 HSPs)
scaffold0120 (104-210)||(19940-20047)
scaffold0120 (46-90)||(20051-20095)
[»] scaffold0028 (1 HSPs)
scaffold0028 (48-184)||(58667-58796)
[»] scaffold0004 (3 HSPs)
scaffold0004 (123-226)||(69905-70009)
scaffold0004 (128-210)||(10507-10588)
scaffold0004 (12-93)||(69790-69871)
[»] scaffold0141 (2 HSPs)
scaffold0141 (140-207)||(14349-14416)
scaffold0141 (104-183)||(14042-14118)
[»] scaffold0012 (2 HSPs)
scaffold0012 (140-207)||(189639-189706)
scaffold0012 (104-183)||(189332-189408)
[»] scaffold0174 (1 HSPs)
scaffold0174 (149-226)||(18359-18437)
[»] scaffold0415 (2 HSPs)
scaffold0415 (104-183)||(472-548)
scaffold0415 (143-207)||(174-239)
[»] scaffold0229 (2 HSPs)
scaffold0229 (104-183)||(11456-11532)
scaffold0229 (140-207)||(11763-11830)
[»] scaffold0671 (2 HSPs)
scaffold0671 (12-92)||(6091-6171)
scaffold0671 (146-226)||(6235-6316)
[»] scaffold0157 (2 HSPs)
scaffold0157 (123-183)||(32615-32675)
scaffold0157 (140-207)||(32922-32989)
[»] scaffold0131 (1 HSPs)
scaffold0131 (123-226)||(36567-36671)
[»] scaffold0043 (2 HSPs)
scaffold0043 (148-226)||(18374-18453)
scaffold0043 (12-93)||(18232-18313)
[»] scaffold0081 (6 HSPs)
scaffold0081 (146-226)||(14804-14885)
scaffold0081 (146-226)||(23819-23900)
scaffold0081 (146-226)||(39243-39324)
scaffold0081 (12-92)||(23675-23755)
scaffold0081 (12-92)||(39099-39179)
scaffold0081 (14-92)||(14662-14740)
[»] scaffold1124 (1 HSPs)
scaffold1124 (12-92)||(1877-1957)
[»] scaffold0210 (2 HSPs)
scaffold0210 (12-92)||(21844-21924)
scaffold0210 (12-92)||(29736-29816)
[»] scaffold0405 (1 HSPs)
scaffold0405 (128-210)||(9588-9670)
[»] scaffold0261 (2 HSPs)
scaffold0261 (148-226)||(1474-1553)
scaffold0261 (12-92)||(1335-1415)
[»] scaffold0139 (1 HSPs)
scaffold0139 (148-226)||(20117-20196)
[»] scaffold0005 (1 HSPs)
scaffold0005 (12-70)||(280953-281011)
[»] scaffold0268 (1 HSPs)
scaffold0268 (131-184)||(956-1009)
[»] scaffold1461 (1 HSPs)
scaffold1461 (104-210)||(5-112)
[»] scaffold0555 (1 HSPs)
scaffold0555 (120-226)||(687-795)
[»] scaffold0114 (1 HSPs)
scaffold0114 (12-92)||(7291-7371)
[»] scaffold0021 (1 HSPs)
scaffold0021 (111-226)||(174864-174980)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-203)||(228303-228459)
[»] scaffold0215 (1 HSPs)
scaffold0215 (12-92)||(26824-26904)
[»] scaffold0198 (1 HSPs)
scaffold0198 (123-226)||(23954-24057)
[»] scaffold0101 (1 HSPs)
scaffold0101 (12-92)||(9004-9084)
[»] scaffold0019 (1 HSPs)
scaffold0019 (24-114)||(29102-29192)
[»] scaffold0220 (2 HSPs)
scaffold0220 (15-92)||(4984-5061)
scaffold0220 (190-222)||(4843-4875)
[»] scaffold0574 (1 HSPs)
scaffold0574 (12-92)||(7858-7938)
[»] scaffold0334 (1 HSPs)
scaffold0334 (38-86)||(18398-18446)
[»] scaffold0168 (1 HSPs)
scaffold0168 (104-210)||(3453-3560)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 9e-94; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 18907107 - 18907324
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18907107 tcaacatcatcttaatcatcttgtatagactcatgcagcttagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatca 18907206  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  18907207 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatgaacttaacagttcataacagcttca 18907306  T
Q  212 cagattgcagttaacatc 229  Q
    || |||||||||||||||    
T  18907307 catattgcagttaacatc 18907324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 20908102 - 20907885
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | ||    
T  20908102 tcaacatcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaaca 20908003  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  20908002 attcatttcaacaacatcttgatcattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacaattcttaacaacttcc 20907903  T
Q  212 cagattgcagttaacatc 229  Q
    ||||||  ||||||||||    
T  20907902 cagattctagttaacatc 20907885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 16523504 - 16523330
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||   || | ||||| ||||||    
T  16523504 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaactttat-acttcatcatatca 16523406  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatca 187  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  16523405 attcatttcatcaacatcttgatcattcaataatatttcaggtaatgcaattaatcattaaatcacattataatca 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 21766691 - 21766839
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||    
T  21766691 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcaacataggcagatcacaacaacaacataatttcataatatca 21766790  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgca 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21766791 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 21766839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 79 - 229
Target Start/End: Complemental strand, 21834941 - 21834793
Alignment:
Q  79 agatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcaca 178  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||    
T  21834941 agatcacaacaacaacataatttcataatatcaattcatttcaacaacatcttgatcattcaataatatttcaagtaatacatttaatcattaaatcaca 21834842  T
Q  179 ttataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||| || ||   ||||||||| |||||| |||||||||||    
T  21834841 ttataatcaacttagcagtt--aaacagcttcacagatttcagttaacatc 21834793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 18180490 - 18180705
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| |||||||||||||||||||||  ||| || ||||| | ||    
T  18180490 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatactt-cataacaaca 18180588  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||||| || | |||||| |      
T  18180589 attcatttcaacaacatcttaatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttaacagttga-aacagcctta 18180687  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  18180688 cagatttcagttaacatc 18180705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 27567715 - 27567525
Alignment:
Q  27 tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaac 126  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||| |||||||||||||||| |||| | ||||||||||| | |||||||||||||||||    
T  27567715 tcatcatgtatagactcatacaacttagttaaataacagcagcagcataatcagatcacaaaaacatcgtaatttcataacaacaattcatttcaacaac 27567616  T
Q  127 atcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagatt 217  Q
    |||| | | ||| ||  |||  |||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||||||    
T  27567615 atctagtttattcaagcataaatcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagatt 27567525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 229
Target Start/End: Complemental strand, 22408406 - 22408208
Alignment:
Q  30 tcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatc 129  Q
    ||||||||||||||  ||||||| |||||||||||  ||||  |||||||||||||||||||   |||| ||||||| | ||||||||||||||||||||    
T  22408406 tcttgtatagactcgtgcaacttggttaaataacaaaagcagtataatcagatcacaacaactttataacttcataacaacaattcatttcaacaacatc 22408307  T
Q  130 ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | ||||||| || |||||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||  || |||||| || ||||||||    
T  22408306 tagatcattcaagaatatttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagtctcacagatttcaattaacatc 22408208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 15894559 - 15894332
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||  || |  |||||     |    
T  15894559 tcaacatcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaacattatgacatcatataaaga 15894460  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataat----atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    |||||| | |  |||| || || ||  |||||| | | ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15894459 tatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 15894360  T
Q  202 aacagcttcgcagattgcagttaacatc 229  Q
    ||||||||| ||||||| ||||||||||    
T  15894359 aacagcttcacagattgtagttaacatc 15894332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 17804216 - 17804380
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  17804216 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatca 17804307  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  17804308 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 17804380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 19790873 - 19790682
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  19790873 gactcatgcaacttagttaaataacaacagcagcataatcagatcacaacatcattataatttcataacaacaattcattttcaacaacatcaagtttat 19790774  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  19790773 tcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 19790682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 38 - 172
Target Start/End: Complemental strand, 27325705 - 27325569
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt--caacaacatcttgatc 135  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||| |||||| |||||| |||| ||||||||||||||||||||   ||||||| |||||||    
T  27325705 agactcatgcaacttagttaattaacaatagcagcataatcatatcacatcaacagtataacttcataatatcaattcattttcaaacaacaacttgatc 27325606  T
Q  136 atttaataatatttcaagtaatgcaattaatcattaa 172  Q
    |||  |||||||||||||||||||| |||||||||||    
T  27325605 attccataatatttcaagtaatgcatttaatcattaa 27325569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 168
Target Start/End: Complemental strand, 22074319 - 22074176
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaaca 124  Q
    ||||||||||||||||||| ||| | ||||||||||| | || || || || ||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  22074319 atcatcttgtatagactcatgcatcatagttaaataataataacagcacaagcagatcacaacaacagcataacttcatgattatcaattcatttcagca 22074220  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaattaatca 168  Q
    |||| ||||| ||| |||||||| ||||||||||||||||||||    
T  22074219 acattttgattattcaataatatctcaagtaatgcaattaatca 22074176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 23414721 - 23414824
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  23414721 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 23414820  T
Q  204 cagc 207  Q
    ||||    
T  23414821 cagc 23414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 27556479 - 27556582
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  27556479 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 27556578  T
Q  204 cagc 207  Q
    ||||    
T  27556579 cagc 27556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 22430117 - 22429960
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||  ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||  |||||||||    
T  22430117 agactcatgcaacttagttaattaactatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaatttcttgatca 22430026  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  22430025 tttaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataa 22429960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 25767255 - 25767098
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  25767255 agactcatgcaacttagttaagtaacaatagcagcataatcagatcacaccaacagcttaat--------atcaattcatcttcaacaacttcttgatca 25767164  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    || ||||||| ||||||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||||    
T  25767163 ttcaataataattcaagtaatgcaatcaatcaataaattacattataatc-acttagcatttcataa 25767098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 31478169 - 31478072
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31478169 caattcattttaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 1644455 - 1644552
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1644455 caattcatttcaacaacatcttgatcattcaaaaatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1644552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 21740008 - 21739925
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||    
T  21740008 atttcaagtaatgcaattaatcattaagtcacattataaccagcttaacatttcataacagcttcacagattgcaattaacatc 21739925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 27416223 - 27416120
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||  ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  27416223 taataacaattcatttcaacaacatcttgatcattcattaatatttagagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 27416124  T
Q  204 cagc 207  Q
    ||||    
T  27416123 cagc 27416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 23657513 - 23657324
Alignment:
Q  41 ctcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaa-catcttgatcatt 138  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||| || ||  |||||||||| | | ||||||| ||||||||| |||   | | |||    
T  23657513 ctcatgcaacttagttaaataacagcagcagcataatcagatcacagcagcattataatttcatcagaacaattcattttcaacaatcattaaggttatt 23657414  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     || ||||  |||||||||||| |||||| ||||||||||||| || || |||||||| |||||||||| || |||||  |||||||||||    
T  23657413 caagaataaatcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacatatcataacagcctcacagatctcagttaacatc 23657324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 22862967 - 22863148
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| |  | ||||||    
T  22862967 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaactttctaatcatt 22863058  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  |||||||| || ||  |||||||||||    
T  22863059 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatc 22863148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 1644726 - 1644863
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||| ||||||| | ||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  1644726 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 1644817  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  1644818 caataataattcaagtaatgcaatcaatcaataaatcacattataa 1644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 25642308 - 25642089
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| | |||||||| ||| |||||| ||||||  ||||||||||| ||||| ||||  ||||| |||||||||| || |  ||| |     |    
T  25642308 tcaacatcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacagtatgacatcacataacga 25642209  T
Q  107 tatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataaca 205  Q
    |||||||  |   |||||||||||| |||||| | | ||| |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||||||    
T  25642208 tatcaataaaaa-caacaacatcttaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataaca 25642110  T
Q  206 gcttcgcagattgcagttaac 226  Q
     ||||  ||||||||||||||    
T  25642109 acttcaaagattgcagttaac 25642089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 14472347 - 14472472
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    |||||||||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||      
T  14472347 taatatcaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaat 14472445  T
Q  203 acagcttcgcagattgcagttaacatc 229  Q
    | |||||| || ||  |||||||||||    
T  14472446 atagcttcacaaataacagttaacatc 14472472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 8243890 - 8244019
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  8243890 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 8243981  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  8243982 attcaagtaatgcaatcaatcaataaatcacattataa 8244019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 11566891 - 11567020
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  11566891 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 11566982  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  11566983 attcaagtaatgcaatcaatcaataaatcacattataa 11567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 19863089 - 19863193
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | |||||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||    
T  19863089 caacatctcaatcattcattcatatttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcag 19863188  T
Q  222 ttaac 226  Q
    |||||    
T  19863189 ttaac 19863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 19870619 - 19870748
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| || |        |||||||||||| ||||||| || |||||||| |||||||    
T  19870619 aacttagttaaataacaatagcagcataatcagattatatcaacagcttatt--------atcaattcattttcaacaacttcctgatcattcaataata 19870710  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  19870711 attcaagtaatgcaatcaatcaataaatcacattataa 19870748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 19873231 - 19873335
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | |||||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||    
T  19873231 caacatctcaatcattcattcatatttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcag 19873330  T
Q  222 ttaac 226  Q
    |||||    
T  19873331 ttaac 19873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 23395097 - 23395226
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  23395097 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 23395188  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  23395189 attcaagtaatgcaatcaatcaataaatcacattataa 23395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 16760072 - 16760139
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  16760072 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 16760139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 15041671 - 15041522
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatc- 110  Q
    ||||||||||| |  ||||||| || ||||||| ||||||||||||||||||| ||| | ||||  ||||||||||||||||||| |  | ||||||||     
T  15041671 tcaacatcatcttgttcatcttataaagactcatgcaacttagttaaataacaatagtagcataggcagatcacaacaacagcatgacattataatatca 15041572  T
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgca 160  Q
    ||| || ||||| |||||||| |  ||| ||||| || ||||||||||||    
T  15041571 aatgcaattcaataacatcttaagtattcaataaaatctcaagtaatgca 15041522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 16760370 - 16760446
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  16760370 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 16760446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 31477841 - 31477765
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  31477841 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 31477765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 18917294 - 18917214
Alignment:
Q  105 aatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||||||||||||| ||||||| || |||||||| ||||||| |||||| |||||||| ||||| |||||||||||||||    
T  18917294 aatatcaattcattttcaacaacttcctgatcattcaataataattcaagcaatgcaatcaatcaataaatcacattataa 18917214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 21740152 - 21740072
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||||||||||||  ||||| ||||||||||||| ||||||||    |||||||||||||||    
T  21740152 tcaacatcatcttaatcatcttgtatagactcgtgcaacatagttaaataacaatagcaacacgggcagatcacaacaaca 21740072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 22949199 - 22949259
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  22949199 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 22949259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 22953155 - 22953215
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  22953155 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 22953215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 23871643 - 23871703
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  23871643 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 23871703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 23875599 - 23875659
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  23875599 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 23875659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 23989949 - 23990078
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| || |        | |||||||||| ||||||| || |||||||| |||||||    
T  23989949 aacttagttaaataacaatagcagcataatcagattatatcaacagcttatt--------accaattcattttcaacaacttcctgatcattcaataata 23990040  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  23990041 attcaagtaatgcaatcaatcaataaatcacattataa 23990078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 27553692 - 27553612
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||| ||||  |||| |||||||||||||||||||||    
T  27553692 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaagaacaacagcagcataatcagatcacaacaaca 27553612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 12618921 - 12618793
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcatttaataatat 147  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| | ||        | |||||||||||||||||  | |||||||| |||||||     
T  12618921 aacttagttaaataacaatagcagcataatcagattatatcaacagcttgat--------accaattcatttcaacaactccctgatcattcaataataa 12618830  T
Q  148 ttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||||||||||||| ||||| |||||||||| ||||    
T  12618829 ttcaagtaatgcaatcaatcaataaatcacataataa 12618793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 22948885 - 22948948
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22948885 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22948948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 22952841 - 22952904
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22952841 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 23871329 - 23871392
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23871329 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 23875285 - 23875348
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23875285 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23875348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 16624207 - 16624283
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||| ||||||||||||| ||||||||||| ||||| ||||    
T  16624207 taataacaattcatttcaac---atcttgatcattcaataatacttcaagtaatgcatttaatcattaattcacaatata 16624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 18955792 - 18955711
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    |||||||||||||||| ||| ||| |||| |||||| ||||||| ||||||||||||||| ||||| | |||||||||||||    
T  18955792 taatatcaattcattttcaataacttcttaatcattcaataataattcaagtaatgcaatcaatcaatcaatcacattataa 18955711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 22438936 - 22439015
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||| |||||| | ||| ||||||| |||||||||  |||||| ||||||||||||| |||||||||||||||    
T  22438936 ttcaagtaatgtaattaaactttatatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaac 22439015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 14472048 - 14472100
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || |||||||    
T  14472048 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaactta 14472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 210
Target Start/End: Original strand, 16741298 - 16741389
Alignment:
Q  119 tcaacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| |||| |||||||| |||||||||||||||| ||||||    
T  16741298 tcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttataatc-acttaacatttcataaaagcttc 16741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 18956092 - 18956040
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || |||||||    
T  18956092 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaactta 18956040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 12496336 - 12496379
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcacaaca 89  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  12496336 gcaacttagttaaataacatttgcagcataatcagatcacaaca 12496379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 16624438 - 16624481
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  16624438 aataatatttcaagtaatgcatttaatcattaattcacagtata 16624481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 19873118 - 19873197
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||| | |||||||| ||  |||||| ||||||| ||||||||||| ||||| ||||  ||||| ||||||||||    
T  19873118 aacatcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 19873197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 22432386 - 22432465
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||| |||||| || || ||||||| |||||||||  | |||| ||||||||||||| ||||||| |||||||    
T  22432386 ttcaagtaatgtaattaaacaatatatcacatcataatcaacactgacatctcataacagcttcacagattgtagttaac 22432465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 27553606 - 27553531
Alignment:
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaactt 191  Q
    ||||||||||||||| | | ||| || ||||  |||||||||||| |||||| ||||||||||||| || ||||||    
T  27553606 atttcaacaacatctagtttattcaagaataaatcaagtaatgcatttaatcgttaaatcacattacaaacaactt 27553531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 19862974 - 19863055
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||  |||||| ||||||| ||||||||||| ||||| ||||   |||| ||||||||||    
T  19862974 tcaacatcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggaagattacaacaacag 19863055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 12706709 - 12706757
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  12706709 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 12706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 19848089 - 19848033
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagca 95  Q
    |||||| ||||||||||||||||||| ||||| ||||  ||||| ||| ||||||||    
T  19848089 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagca 19848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 22449382 - 22449169
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||| |    
T  22449382 catcatcttaatcatcttgtatagactcatgcaacttagttaaataatagtagcagcataatcagatcacaacaagagcataatttcataatatcaatac 22449283  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcaga 215  Q
     |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  22449282 ttttcaacaacatcttgatcattcaataatatttcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataacagcttcacaga 22449183  T
Q  216 ttgcagttaacatc 229  Q
    ||||||||||||||    
T  22449182 ttgcagttaacatc 22449169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 18182241 - 18182027
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18182241 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatca 18182142  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||     
T  18182141 atttatttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattgaatcacattataaacaacttagcatctcataacagcttca 18182042  T
Q  212 cagattgcagttaac 226  Q
    ||| |||||||||||    
T  18182041 cagtttgcagttaac 18182027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 3473043 - 3472840
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |  |   ||| ||||||||||||    
T  3473043 tcaacatcaacttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaagagtat--taacttcataatatca 3472946  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    | ||| ||||||||||||||||||||| || ||||||||||||||| || |||||||||||||||||||  || ||||||| |||||||||||||||||     
T  3472945 aatcacttcaacaacatcttgatcattcaacaatatttcaagtaattcatttaatcattaaatcacatttcaaacaacttagcatttcataacagcttca 3472846  T
Q  212 cagatt 217  Q
    ||||||    
T  3472845 cagatt 3472840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 8761740 - 8761536
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaaca 124  Q
    ||||||||||||||||||| ||| | ||||||||||||| || || || || ||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  8761740 atcatcttgtatagactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaacaacataacttcataattatcaattcatttcaaca 8761641  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagtta 224  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||| | ||||| | |||||||||||||| |||||| || |||    
T  8761640 acatcttgattattcaataatatctcaagtaatgcaattaatcaataaatcacatcataattagcttaatagttcataacagcttcacagatttcattta 8761541  T
Q  225 acatc 229  Q
    |||||    
T  8761540 acatc 8761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 17678706 - 17678491
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| |||||||||||||||||||||  ||| || ||||| | ||    
T  17678706 tcaacatcatcttattcatcttataacgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatactt-cataacaaca 17678608  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||| || |||||||||| |||| |||||| |      
T  17678607 attcatttcaacaacatcttaatcattcaataatatttcaagtaatgcatttaatcattaaataacattacaaacaacttaacagttca-aacagcctta 17678509  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  17678508 cagatttcagttaacatc 17678491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 3705164 - 3704980
Alignment:
Q  33 tgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttg 132  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||| |    
T  3705164 tgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacatcaaaatttcataacaacaattcatttcaacaacatctag 3705065  T
Q  133 atcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagatt 217  Q
     | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||| | ||| ||||| |||| ||||||    
T  3705064 tttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagatt 3704980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 24783209 - 24783004
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |  ||||||| ||||||||||||||||||| ||||| |||||||||||||||  |||||| ||||        ||||||||    
T  24783209 catcatcttaatcatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatgaacagcttaat--------atcaattc 24783118  T
Q  116 attt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcag 214  Q
    |||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||     
T  24783117 attttcaacaacttcttgatcattcaataataattcaagtaatgcaattaattaataaatcacattataatc-acttagcatttcataacagcttcacaa 24783019  T
Q  215 attgcagttaacatc 229  Q
     || |||||||||||    
T  24783018 ttttcagttaacatc 24783004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 21788163 - 21787948
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||||  ||||| ||||  ||||||||||||||||||| | ||| ||||||||    
T  21788163 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataaccatagcagcataggcagatcacaacaacagcatgacttcgtaatatca 21788064  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | ||||||||||||||||||| |||||| |||||||| | ||||||||||  ||| ||||| || |||| ||||||||| | |||||||||||||||||     
T  21788063 atttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cattatataacatcataatcaacatcaacatttcataacagctg 21787965  T
Q  210 cgcagattgcagttaac 226  Q
    |  ||||||||||||||    
T  21787964 catagattgcagttaac 21787948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 33050146 - 33049984
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||| ||    
T  33050146 tcaacaacatcttattcatcatgtataaactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacttcataatttcataataaca 33050047  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaat 174  Q
    || ||||||| |||||||| | | ||| || |||| ||||||||||||| |||||| ||||||    
T  33050046 atccatttcatcaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaat 33049984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 45489837 - 45489646
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||||||| || |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  45489837 gactcatgcaacttagttaaataatagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 45489738  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |  | |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  45489737 tcgagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 45489646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 18394059 - 18393867
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca--tttcaacaacatcttgatca 136  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| ||  |||||| ||||| | |||||    |||||||||| ||  | | |    
T  18394059 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcattataattccataacaacaattttattttcaacaacttcaaggtta 18393960  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    || || ||||  |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||    
T  18393959 ttcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatc 18393867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 20229168 - 20229071
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20229168 caattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 6151988 - 6152071
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||    
T  6151988 atttcaagtaatgcaattaatcattaaatcacattataaacagcttaacatttcataacagcttcacagattgcaattaacatc 6152071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 21022767 - 21022854
Alignment:
Q  142 taatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||    
T  21022767 taatatttcaagtaatgcaattaatcattaattcacattataatcagcttaacagttcataatagcttcacagattgcagttaacatc 21022854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 33797358 - 33797461
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  33797358 taataacaattcatttcaacaacatcttgatcattcaataatatttcgattaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 33797457  T
Q  204 cagc 207  Q
    ||||    
T  33797458 cagc 33797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 42865195 - 42865114
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  42865195 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacctttcataacagcttcacagattgcagttaacatc 42865114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 22468790 - 22468644
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||||||||| ||||||||||  ||||| ||||||||||||| |  |||||||||||||| || |||||||||||||| || ||    
T  22468790 gactcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattat 22468691  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    | |||||||| ||||||||||||  ||| ||||| ||||||| |||||    
T  22468690 tcaataatatctcaagtaatgcacataa-cattatatcacatcataat 22468644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 22831363 - 22831281
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||    
T  22831363 atttcaagtaatgcaattaatcattaaatcacattataatcagc-taacatttcataacagcttcacagattgcaattaacatc 22831281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 36819396 - 36819231
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| || |||| |||| |||       ||||||||| ||||||| |||||||||    
T  36819396 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaccagcttaatatca-------aattcattttcaacaacttcttgatca 36819304  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| |||||| |||||||| ||| | ||||||||| ||||||| |||||||||||||||| ||||||    
T  36819303 ttcaataataattcaagaaatgcaatcaataaataaatcacaatataatc-acttaacatttcataaaagcttc 36819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 45310462 - 45310270
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-cattt-caacaacatcttgatca 136  Q
    |||||| ||||||||||||||||||   |||| |||||||||||||||||| ||  |||||| ||||| | ||||| ||||| ||||||| ||  | | |    
T  45310462 gactcatgcaacttagttaaataacgacagcagcataatcagatcacaacagcattataattccataacaacaatttcattttcaacaacttcaaggtta 45310363  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    || || ||||  ||||| |||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||    
T  45310362 ttcaagaataaatcaagcaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatc 45310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 16080531 - 16080367
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||| | ||||| ||||||||||||||| |||     ||| ||   | ||||||||||||| ||||||| |||||||||    
T  16080531 agactcatgcaacttagttaattaaaaatagcagcataatcagatcacatcaa-----taactt---attatcaattcattttcaacaacttcttgatca 16080440  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |  ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  16080439 tccaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttc 16080367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 1010744 - 1010925
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  1010744 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 1010835  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  1010836 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 1010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 20228894 - 20228757
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||| ||||||| | ||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  20228894 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 20228803  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  20228802 caataataattcaagtaatgcaatcaatcaataaatcacattataa 20228757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 16375535 - 16375406
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  16375535 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 16375444  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  16375443 attcaagtaatgcaatcaatcaataaatcacattataa 16375406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 21407384 - 21407513
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  21407384 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 21407475  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  21407476 attcaagtaatgcaatcaatcaataaatcacattataa 21407513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 21022627 - 21022705
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaa 90  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| || |  |||||||||||||    
T  21022627 tcaacatcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaggcagatcacaacaa 21022705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 1925160 - 1925084
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  1925160 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 1925084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 20924174 - 20924098
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  20924174 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 20924098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 52639618 - 52639699
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  52639618 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 52639699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 6151844 - 6151924
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| ||    |||||||||||||||    
T  6151844 tcaacatcatcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagcacgggcagatcacaacaaca 6151924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 21714659 - 21714763
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||    
T  21714659 caacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 21714758  T
Q  222 ttaac 226  Q
    |||||    
T  21714759 ttaac 21714763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 39244156 - 39244096
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  39244156 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 39244096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 39247711 - 39247651
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  39247711 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 39247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 41388256 - 41388196
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  41388256 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 41388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 1925458 - 1925391
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1925458 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 20924472 - 20924405
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20924472 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20924405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 22831504 - 22831449
Alignment:
Q  15 acatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagca 70  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  22831504 acatcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagca 22831449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 42865334 - 42865253
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||| |||||| ||||| ||||||||||||| ||||||||||  |||||  |||||||||    
T  42865334 tcaacatcatcttgatcatcttatatcgactcatgcaacatagttaaataacaatagcaacatatgcagattgcaacaacag 42865253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 19211943 - 19212050
Alignment:
Q  104 taatatcaattcatt-tcaacaacatcttgatcatttaataatatttcaagtaa-tgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| ||||||||| |||||||  ||||||||||| || |||| ||||||||| | |||| ||||  ||| |||| ||||||||| |||||||||||||    
T  19211943 taataacaattcattctcaacaatttcttgatcattcaacaataattcaagtaaatacaatcaatccataattcactttataatca-cttaacatttcat 19212041  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  19212042 aaaagcttc 19212050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 39243941 - 39243898
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  39243941 aataatatttcaagtaatgcatttaatcattaattcacagtata 39243898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 39247496 - 39247453
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  39247496 aataatatttcaagtaatgcatttaatcattaattcacagtata 39247453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 20135214 - 20135336
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca-attcatttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||| |||| ||||| ||||  ||||| ||||||||| ||| |  | |||||||||  | || |||||||||||||| |  ||    
T  20135214 gactcatgcaacttagttaaacaacaatagcagcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtat 20135313  T
Q  138 ttaataatatttcaagtaatgca 160  Q
    | ||||| | |||||||||||||    
T  20135314 tcaataaaacttcaagtaatgca 20135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 20091597 - 20091520
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaaca 89  Q
    ||||||||||| | |||||||| ||| |||||| ||||||  ||||||||||| ||||| ||||  ||||| ||||||    
T  20091597 tcaacatcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaaca 20091520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 20091486 - 20091379
Alignment:
Q  120 caacaacatcttgatcatttaataatatttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagatt 217  Q
    |||||||||||  |||||| | | ||| |||||||  ||||||| |||||||||| ||||| ||| ||||| |||||||  | |||||||||| ||||||    
T  20091486 caacaacatctcaatcattcattcataattcaagtcgtgcaatttaatcattaaa-cacatcatattcaacattaacatcacgtaacagcttcacagatt 20091388  T
Q  218 gcagttaac 226  Q
    |||||||||    
T  20091387 gcagttaac 20091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 20138103 - 20138151
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  20138103 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 20138151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 23819329 - 23819222
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatg-caattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| || |||  ||||||||||| ||||||| ||||||||| | |||| ||||  |||||||| ||||| || ||||||||| ||||    
T  23819329 taataacaattcattttcagcaatttcttgatcattcaataataattcaagtaaagacaatcaatccataaatcactttatattc-acttaacatctcat 23819231  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  23819230 aaaagcttc 23819222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 41388046 - 41388014
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  41388046 aataatatttcaagtaatgcatttaatcattaa 41388014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 12321860 - 12321645
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaat 113  Q
    |||||| || ||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  12321860 aacatcttcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagcataatcagatcacaacaacagcataacttcataatatcaat 12321761  T
Q  114 tcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgca 213  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||    
T  12321760 tcatttcaacaacatcttgatcattccataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacagttcataacagtttcaca 12321661  T
Q  214 gattgcagttaacatc 229  Q
    ||||||||||||||||    
T  12321660 gattgcagttaacatc 12321645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 14429879 - 14430095
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||| ||| || ||| ||||||    
T  14429879 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagccgcataatcagatcacaacaacagtatactt-catcatatca 14429977  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||     
T  14429978 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttca 14430077  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  |||||||||||    
T  14430078 cagatctcagttaacatc 14430095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 9751875 - 9751703
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| | |||||| |||||| ||||||||||    
T  9751875 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagtataatt-cataatatca 9751777  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9751776 attcattccaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 9751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 2832558 - 2832389
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||| || |||||  |||| || |||||||||||||    
T  2832558 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcccatcaacaatataactttataatatcaattc 2832459  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2832458 atttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 2832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 9446279 - 9446074
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||    
T  9446279 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaacatcataatttcataacaaca 9446180  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  9446179 attcatttcaacaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttca 9446080  T
Q  212 cagatt 217  Q
    ||||||    
T  9446079 cagatt 9446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 39268020 - 39267847
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| || ||||||  | || ||||||||||||    
T  39268020 tcaacatcatcttgatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagattaccacaacattaaaacttcataatatca 39267921  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||||||||||    
T  39267920 attcatttcaacaacatcttgatcattcaatactatttcaagtaatgcatttaatcattaattcacattataat 39267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 3271819 - 3272036
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataa-tatc 110  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| ||||||||||||||||||||||||||| ||||||| ||||    
T  3271819 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacagcataacttcataattatc 3271918  T
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||| | ||||||||||||||    
T  3271919 aattcatttctacaacatcttgattattcaataata-ttcaagtaatgcaattaatcagtaaatcacatcataatcagcttaatagttcataacagcttc 3272017  T
Q  211 gcagattgcagttaacatc 229  Q
     || ||| || ||||||||    
T  3272018 acatatttcatttaacatc 3272036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 2760141 - 2760344
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaaca 124  Q
    ||||||||||||||||||| ||||||||||||||||||   |||| |||||||||||||||||||||  |||| ||||||||||||||||| ||||||||    
T  2760141 atcatcttgtatagactcatgcaacttagttaaataacgaaagcagcataatcagatcacaacaacattataacttcataatatcaattcattttcaaca 2760240  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagtta 224  Q
    ||||| |||||||| |||||||| |||||||||||| |||||||||||||||||||| || ||||||| || || | |||||| || |||||| ||||||    
T  2760241 acatcatgatcattcaataatatctcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aacagcctcacagatttcagtta 2760339  T
Q  225 acatc 229  Q
    |||||    
T  2760340 acatc 2760344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 11312667 - 11312831
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  11312667 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatca 11312758  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  11312759 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 11312831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 12318146 - 12318310
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||| |||| ||||    
T  12318146 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaacttcttaatca 12318237  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  12318238 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttc 12318310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 20569690 - 20569518
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  20569690 gactcatgcaacttagttaaataacagcagcaacataatcatatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 20569591  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    | || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||    
T  20569590 tcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttc 20569518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 13635556 - 13635392
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||  |||||||||    
T  13635556 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaatttcttgatca 13635465  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  13635464 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 13635392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 15580710 - 15580893
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||| | || ||||    
T  15580710 agactcatgcaacttagttaaataacgatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaacttttttatca 15580801  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    || ||||||| ||||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||    
T  15580802 ttcaataataattcaagtaatgcaatcaattaataaatcacattataatc-acttagcatttcataatagcttcacagttttcagttaacatc 15580893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 15605360 - 15605195
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| |||  |||||||| ||||| ||||| ||||||||||||||| ||||||| |||| |||       ||||||||| ||||||| |||||||||    
T  15605360 agactcatgcattttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatca-------aattcattttcaacaacttcttgatca 15605268  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  15605267 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttc 15605195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 13918809 - 13918706
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||    
T  13918809 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataa 13918710  T
Q  204 cagc 207  Q
    ||||    
T  13918709 cagc 13918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 25927525 - 25927431
Alignment:
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 205  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  25927525 aattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 25927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 207
Target Start/End: Complemental strand, 1859169 - 1859012
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcattt 139  Q
    ||||| ||||||||||||||||||| | ||| |||||||| ||||||||||           | ||||| |||||| ||||||||||||||||||||||     
T  1859169 actcatgcaacttagttaaataacaattgcagcataatcaaatcacaacaag----------cttaataacaattcttttcaacaacatcttgatcattc 1859080  T
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  1859079 aataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 1859012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 39722287 - 39722424
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        ||||| |||||| ||||||| || ||||||||    
T  39722287 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaactcattttcaacaacttcctgatcatt 39722378  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||    
T  39722379 caataataattcaagtaatgcaattaatcaataaatcacattataa 39722424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 16583275 - 16583438
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||| ||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||  ||| |||||    
T  16583275 agactcatgcaacgtagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaatttctcgatca 16583366  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || || |||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  16583367 ttcaacaataattcaagtaatgcaatcaatca-taaatcacattataatc-acttagcatttcataatagcttc 16583438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 7519387 - 7519322
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcat 169  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  7519387 taataacaattcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcat 7519322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 70850 - 70669
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | || |||    
T  70850 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaattatt 70759  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  70758 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 70669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 74959 - 74778
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | || |||    
T  74959 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaattatt 74868  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  74867 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 74778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 12714893 - 12715022
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  12714893 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 12714984  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  12714985 attcaagtaatgcaatcaatcaataaatcacattataa 12715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 12718697 - 12718826
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  12718697 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 12718788  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  12718789 attcaagtaatgcaatcaatcaataaatcacattataa 12718826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 16114270 - 16114399
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| || |        |||||||||||| ||||||| || |||||||| |||||||    
T  16114270 aacttagttaaataacaatagcagcataatcagattatatcaacagcttatt--------atcaattcattttcaacaacttcctgatcattcaataata 16114361  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  16114362 attcaagtaatgcaatcaatcaataaatcacattataa 16114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 16117423 - 16117552
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| || |        |||||||||||| ||||||| || |||||||| |||||||    
T  16117423 aacttagttaaataacaatagcagcataatcagattatatcaacagcttatt--------atcaattcattttcaacaacttcctgatcattcaataata 16117514  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  16117515 attcaagtaatgcaatcaatcaataaatcacattataa 16117552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 16907278 - 16907149
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  16907278 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 16907187  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  16907186 attcaagtaatgcaatcaatcaataaatcacattataa 16907149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 18283395 - 18283524
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  18283395 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 18283486  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  18283487 attcaagtaatgcaatcaatcaataaatcacattataa 18283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 26292416 - 26292553
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  26292416 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------atcaattcattttcaacaacttccttatcatt 26292507  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||| ||||||||| ||||| |||||||||||||||    
T  26292508 caataataattcaattaatgcaatcaatcaataaatcacattataa 26292553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 15083973 - 15084040
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  15083973 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 15084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 33184 - 33309
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    |||||||||||||||| ||||||| || | |||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||      
T  33184 taatatcaattcattttcaacaacttcctaatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaat 33282  T
Q  203 acagcttcgcagattgcagttaacatc 229  Q
    | |||||| || ||  |||||||||||    
T  33283 atagcttcacaaataacagttaacatc 33309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 18279480 - 18279561
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  18279480 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 18279561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 45170037 - 45169961
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  45170037 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 45169961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 9703401 - 9703480
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||| | | |  |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  9703401 ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaacatttcataacagcttcacagattgcagttaac 9703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 12723670 - 12723737
Alignment:
Q  117 tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    |||||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  12723670 tttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 12723737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 39722043 - 39722110
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  39722043 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 39722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 45170335 - 45170272
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  45170335 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 45170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 18425513 - 18425578
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| |||||||||||    
T  18425513 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaa 18425578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 42204017 - 42204151
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||| ||||  |||| ||||||||||||||| || ||  |||||||||| | | ||||||| |||||||||||||  | | ||    
T  42204017 gactcatgcaacttagttaaacaacaacagcagcataatcagatcacagcagcattataatttcatgacaacaattcattttcaacaacatcaaggttat 42204116  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaa 172  Q
    | || ||||  |||||||||||| |||||||||||    
T  42204117 tcaagaataaatcaagtaatgcatttaatcattaa 42204151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 12704688 - 12704607
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||| | ||||| |||||||||||||||    
T  12704688 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcattcaatcaataaatcacattataa 12704607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 17138181 - 17138101
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||  ||||| |||||||||    
T  17138181 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 17138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 18154846 - 18154742
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| |||||||||||||||||| ||||| ||| ||| ||| ||||| ||||||| ||||||||||||| || |||||||    
T  18154846 caacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataacagcttcacatattgcag 18154747  T
Q  222 ttaac 226  Q
    |||||    
T  18154746 ttaac 18154742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 2530420 - 2530316
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    ||||| |||||||||| || |||  |||||||||||  ||||| |||  ||||||||| |||||||||||||||||||| || ||||||| || |||||     
T  2530420 taataacaattcattttcagcaatttcttgatcattccataattttttgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcatg 2530321  T
Q  203 acagc 207  Q
    |||||    
T  2530320 acagc 2530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 19649610 - 19649390
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca-----gcataatttcataa 106  Q
    ||||||||||| | |||||||| ||  |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||      ||| |  | | ||    
T  19649610 tcaacatcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcatagacagattacaacaacaatatgacatcacataacaa 19649511  T
Q  107 tatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataaca 205  Q
    |||||| | |   || ||||||||  |||||| | | ||| |||||||||||||||||||||||| ||||||| ||| |||||  ||||||  | ||||     
T  19649510 tatcaaataaaaacagcaacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaact 19649411  T
Q  206 gcttcgcagattgcagttaac 226  Q
    ||||| |||||||||||||||    
T  19649410 gcttcacagattgcagttaac 19649390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 12187015 - 12187078
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacata 75  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||    
T  12187015 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 12187078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 24054603 - 24054682
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||| | |||| ||| | ||||||| |||||||||  |||||| ||||||||||||| |||||||||||||||    
T  24054603 ttcaagtaatgtatttaaacatcatatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaac 24054682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 19144 - 19096
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  19144 agactcatgcaacttagttaaataacatttgcagcataatcaaatcaca 19096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 9593365 - 9593413
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  9593365 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 9593413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 9593421 - 9593528
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| | || ||||| || |||||| |||||||    
T  9593421 taataacaattcattttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataatttactttatattc-acttaaaatttcat 9593519  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  9593520 aaaagcttc 9593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 9644384 - 9644491
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| | || ||||| || |||||| |||||||    
T  9644384 taataacaattcattttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataatttactttatattc-acttaaaatttcat 9644482  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  9644483 aaaagcttc 9644491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 11987231 - 11987279
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  11987231 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 11987279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 18425748 - 18425780
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  18425748 aataatatttcaagtaatgcatttaatcattaa 18425780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 18425948 - 18425980
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  18425948 aataatatttcaagtaatgcatttaatcattaa 18425980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 15083 - 15299
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| || || |||||||||||||||||| |||||||| ||||||||||||    
T  15083 tcaacatcatcttaatcatcttgtatacactcatgcaacttagttaaataacaataacagcataatcagatcacaaca-cagcataacttcataatatca 15181  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||     
T  15182 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaactttttataacagcttca 15281  T
Q  212 cagattgcagttaacatc 229  Q
    ||||||||||||||||||    
T  15282 cagattgcagttaacatc 15299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 30643412 - 30643194
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  30643412 tcaacatcatcttaatcatcttgaatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacaacataacttcataatatca 30643313  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc-ttc 210  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||    
T  30643312 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcatattataatcaacttaacagttcgtaacagctttc 30643213  T
Q  211 gcagattgcagttaacatc 229  Q
     ||||||||||||||||||    
T  30643212 acagattgcagttaacatc 30643194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 20466161 - 20465945
Alignment:
Q  12 tcaacatcatcctaatcatcttgtata--gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatat 109  Q
    ||||||||||| |||||||||| ||||  |||||| ||||||||||||||||||| |||||  |||  ||||||||||||||| ||||| ||||||||||    
T  20466161 tcaacatcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagtataggcagatcacaacaacaacataacttcataatat 20466062  T
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagctt 209  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20466061 caattcatttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagctt 20465962  T
Q  210 cgcagattgcagttaac 226  Q
    | |||||||||||||||    
T  20465961 cacagattgcagttaac 20465945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 15603123 - 15602920
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    ||||||||||||||||||| ||||||| |||||||||||  |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  15603123 atcatcttgtatagactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaacagcaaaatttcataatatcgattcatttcaacaa 15603024  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagtta 224  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |  ||||||| || ||||| ||||||||| |||||| ||||||    
T  15603023 catcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacagacaacttagcagtttca-aacagcttcacagatttcagtta 15602925  T
Q  225 acatc 229  Q
    |||||    
T  15602924 acatc 15602920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 17926826 - 17926610
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||| | ||||  ||||||| |||||||||||||||||| |||||||    
T  17926826 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagtagcataggcagatcaaaacaacagcataatttcacaatatca 17926727  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||     
T  17926726 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttca 17926628  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| || ||||||||    
T  17926627 cagatttcaattaacatc 17926610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 15611575 - 15611372
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    ||||||||||||||||||| ||||||| |||||||||||  | || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  15611575 atcatcttgtatagactcatgcaacttggttaaataacaaaaccagcataatcagatcacatcaacagcaaaatttcataatatcaattcatttcaacaa 15611476  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagtta 224  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |  |||||||  | ||||| ||||||||| |||||| ||||||    
T  15611475 catcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacagacaacttagtagtttca-aacagcttcacagatttcagtta 15611377  T
Q  225 acatc 229  Q
    |||||    
T  15611376 acatc 15611372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 26 - 225
Target Start/End: Complemental strand, 16410360 - 16410162
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    |||||||| ||  |||||| |||||||||| |||||||| ||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16410360 atcatcttataatgactcatgcaacttagtgaaataacaatagcagcataggcagatcacaacaacagcataatttcataataccaattcatttcaacaa 16410261  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| |||||||    
T  16410260 catcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcagttaa 16410162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 16861445 - 16861258
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||  |||||||||||  |||| |||||||||||||||||||||  ||| |||||||| | ||    
T  16861445 tcaacatcatcttattcatcttataatgactcatgcaactcggttaaataacaaaagcagcataatcagatcacaacaacattata-tttcataacaaca 16861347  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 200  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||||| || |||||||||| ||||    
T  16861346 attcatttcaacaacatcttaatcattcaataatatttcaagtaatgtatttaatcattaaatcacattacaaacaacttaacagttca 16861258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 22010781 - 22010582
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    ||||||||||||||||||| ||||||| |||||||||||  |||| ||||||||||||||||||||   |||| ||||||| | |||||||||||   ||    
T  22010781 atcatcttgtatagactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaactttataacttcataacaacaattcatttc---aa 22010685  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||| | || |||||| |||||||    
T  22010684 catctagatcattcaagaatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacaacctcacagatttcagttaa 22010586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 23776956 - 23776741
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||||  ||||| ||||  |||||||||||| |||||| | ||| ||||||||    
T  23776956 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataactatagcagcataggcagatcacaacatcagcatgacttcttaatatca 23776857  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | ||||||||||||||||||| |||||| |||||||| | ||||||||||  ||| ||||| || |||| ||| ||||| | ||||||||||||||||||    
T  23776856 atttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cattatataacatcatattcaacatcaacatttcataacagctt 23776758  T
Q  210 cgcagattgcagttaac 226  Q
    | || ||||||||||||    
T  23776757 cacaaattgcagttaac 23776741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 24755710 - 24755937
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||  || |  |||||     |    
T  24755710 tcaacatcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaacattatgacatcatataaaga 24755809  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataat----atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    |||||| | |  |||| || || ||  |||||| | | ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24755810 tatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 24755909  T
Q  202 aacagcttcgcagattgcagttaacatc 229  Q
    ||||||||| ||||||||||||||||||    
T  24755910 aacagcttcacagattgcagttaacatc 24755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 20856545 - 20856328
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| |||||||||||||||||||  |||| ||||||||||||||||||| |  |||| ||||||| | ||    
T  20856545 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaa-agcagcataatcagatcacaacaatattataacttcataacaaca 20856447  T
Q  112 attcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||| ||||||||||| | | ||| || |||| ||||||||||||| |||||||||||||||||||| || || |||| || |||||||||| |||    
T  20856446 attcattttcaacaacatctaggttattcaagaataattcaagtaatgcatttaatcattaaatcacattacaaacagcttagcaattcataacaggttc 20856347  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||  ||| |||||||    
T  20856346 acagatctcagctaacatc 20856328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 377414 - 377494
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  377414 tcaagtaatgcaattaatcattaaatcacattatgatcagcttaacatttcataacagcttcacagattgcagttaacatc 377494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 39095045 - 39094861
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| |||||||||||||||||||  |||| |||| ||||||||||||||||  |||| ||||||||| ||    
T  39095045 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaacattataacttcataataaca 39094946  T
Q  112 attca-tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 195  Q
    ||||| |||||||||||||  | | ||| || ||||  |||||||||||| ||||||||||||| |||||| || ||||||||||    
T  39094945 attcattttcaacaacatcaaggttattcaagaataaatcaagtaatgcatttaatcattaaattacattacaaacaacttaaca 39094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 14398138 - 14398035
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  14398138 taataacaattcatttcaacaacaacttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 14398039  T
Q  204 cagc 207  Q
    ||||    
T  14398038 cagc 14398035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 19259565 - 19259485
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  19259565 tcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataatagcttcacagattgcagttaacatc 19259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 16184848 - 16184944
Alignment:
Q  134 tcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||    
T  16184848 tcatttattaacatttcaagcaatgcaattaaacattaaatcacattataatcaacattaacatctcatatcagcttcacagattgcagttaacatc 16184944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 19983228 - 19983306
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  19983228 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 19983306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 19899230 - 19899308
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  19899230 tcaagtaatgaaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 19899308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 43251834 - 43251971
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  43251834 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 43251925  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  43251926 caataataattcaagtaatgcaatcaatcaataaatcacattataa 43251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 377267 - 377347
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||| ||||| || || |||||||||||||||    
T  377267 tcaacatcatcttaatcatcttgtatatactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaaca 377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 19278360 - 19278231
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  19278360 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 19278269  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  19278268 attcaagtaatgcaatcaatcaataaatcacattataa 19278231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 21972662 - 21972533
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  21972662 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 21972571  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  21972570 attcaagtaatgcaatcaatcaataaatcacattataa 21972533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 21976747 - 21976618
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  21976747 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 21976656  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  21976655 attcaagtaatgcaatcaatcaataaatcacattataa 21976618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 21828343 - 21828276
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  21828343 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 21828276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 18862676 - 18862600
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  18862676 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 18862600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 21383675 - 21383801
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcattt 139  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||| |||           | ||||| |||||||||||||||||||||| ||||||     
T  21383675 actcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaag----------cttaataacaattcatttcaacaacatcttaatcattc 21383764  T
Q  140 aataatatttcaagtaatgcaattaatcattaaatca 176  Q
    |||| |||||| || |||||| |||||||||||||||    
T  21383765 aatactatttcgagcaatgcatttaatcattaaatca 21383801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 21828045 - 21827969
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  21828045 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 21827969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 22111928 - 22112009
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  22111928 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 22112009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 18862974 - 18862911
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  18862974 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 18862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 21387149 - 21387228
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||||||||||||||||  ||| |||||| |  |||||| ||||||||||||||||| ||||    
T  21387149 taataacaattcatttcaacaacatcttgatcattcgatactatttcgaacaatgcatttaatcattaaatcacagtata 21387228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 21410727 - 21410794
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21410727 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 21805219 - 21805286
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21805219 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 21168708 - 21168627
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  21168708 atttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 21168627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 21411025 - 21411096
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcaca 178  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||    
T  21411025 taataacaattcatttcaac---atcttgatcattcaataatatttcaaataatgcatttaatcattaattcaca 21411096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 21805517 - 21805588
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcaca 178  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||    
T  21805517 taataacaattcatttcaac---atcttgatcattcaataatatttcaaataatgcatttaatcattaattcaca 21805588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 18678196 - 18678074
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||||||||| ||||| ||||  ||||| ||| ||||||||  |  | | |||||||||| || |||||||||||||| |  ||    
T  18678196 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatat 18678097  T
Q  138 ttaataatatttcaagtaatgca 160  Q
    | |||||||| ||||||||||||    
T  18678096 tcaataatatctcaagtaatgca 18678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 32121759 - 32121881
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||||||||| ||||| ||||  ||||| ||| ||||||||  |  | | |||||||||| || |||||||||||||| |  ||    
T  32121759 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatat 32121858  T
Q  138 ttaataatatttcaagtaatgca 160  Q
    | |||||||| ||||||||||||    
T  32121859 tcaataatatctcaagtaatgca 32121881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 16184716 - 16184796
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| |||||| ||| |||| || |||||| |||| ||||| ||||| || ||||||||||||    
T  16184716 tcaacatcatcttaatcatcttatatagaatcatgcaagttggttaaacaacaatagcagcataagcatatcacaacaaca 16184796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 16231505 - 16231398
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| |||| ||||| || ||||||||||||||    
T  16231505 taataacaattcattttcaacaaattcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttatattc-acttaacatttcat 16231407  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  16231406 aaaagcttc 16231398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 17354064 - 17353984
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| | |||||||| ||| |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  17354064 tcaacatcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 17353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 21162179 - 21162099
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||| | || || ||||  |||||||||||||||    
T  21162179 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 21168852 - 21168772
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||| | || || ||||  |||||||||||||||    
T  21168852 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21168772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 23648580 - 23648730
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||| ||||| ||||||||||  ||||| ||||||||| ||| |  | ||||||||| || || | |||||||||||| |  ||    
T  23648580 gactcatgcaacttagttaattaacaatagcaacataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaatat 23648679  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac 189  Q
    | ||||| | |||||||||||||   || ||||| ||||||| |||||||||    
T  23648680 tcaataaaacttcaagtaatgcacacaa-cattatatcacatcataatcaac 23648730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 22028647 - 22028740
Alignment:
Q  117 tttcaacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| |||| ||||| || |||||||||||||||| ||||||    
T  22028647 tttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttatattc-acttaacatttcataaaagcttc 22028740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 21162000 - 21161964
Alignment:
Q  190 ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||||||||||||| |||||||||||||||    
T  21162000 ttaacatttcataacagcttcacagattgcagttaac 21161964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 22044960 - 22045067
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  |||||||||||  |||||| ||||||| |||||||| ||||  ||| |||| |||||||| ||||||||| ||||    
T  22044960 taataacaattcattttcaacaatttcttgatcattccataataattcaagtaaatgcaatcaatccataattcactttataatc-acttaacatctcat 22045058  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  22045059 aaaagcttc 22045067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 16231561 - 16231509
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaa 90  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| |||||| |||    
T  16231561 agactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 16231509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 6429 - 6212
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  6429 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacatcataacttcataatatca 6330  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||     
T  6329 attcatttcaacaacttcttgatcattcaataatatttcaagtaatgcaattaataattaaatcacaatataaacaacttaacatttcataatagcttca 6230  T
Q  212 cagattgcagttaacatc 229  Q
    ||||||||| ||||||||    
T  6229 cagattgcatttaacatc 6212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 159; Significance: 8e-85; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 4426 - 4640
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  4426 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatggcagcataatcagatcacaacaacagcataatttcataatatca 4525  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||     
T  4526 attcatttcaacaacatcttgatcattcgataatatttcaagtaatgcaattaatcaataaatcacattataatcaacttagcatttcataatagtttca 4625  T
Q  212 cagattgcagttaac 226  Q
    ||| || ||||||||    
T  4626 cagtttacagttaac 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 526 - 602
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  526 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 155 - 373
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||| ||||||||||||    
T  155 tcaacatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacaacataacttcataatatca 254  T
Q  112 attcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  255 attcattttcaacaacatcttgatcattcaataatatttcaagtaatgcaattagtcattaaatcacattataatcaacttaacagttcataacagcttc 354  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||| | |||||||||    
T  355 acagatttccgttaacatc 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 389 - 606
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  389 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacagcagcataacttcataatatca 488  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  ||||||     
T  489 attcttttcaacgacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttca 588  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  || ||||||||    
T  589 cagatctcaattaacatc 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 18778 - 18562
Alignment:
Q  12 tcaacatcatcctaatcatcttgtata--gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatat 109  Q
    ||||||||||| |||||||||| ||||  |||||| ||||||||||||||||||| ||||| ||||  |||||||||||||||| |||| ||||||||||    
T  18778 tcaacatcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagaataacttcataatat 18679  T
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagctt 209  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  18678 caattcgtttcaacaacatcttgatcattcaataatatttcaagtaatggaattaatcattaaatcacattataatcaacataccatttcataacagctt 18579  T
Q  210 cgcagattgcagttaac 226  Q
    | |||||||||||||||    
T  18578 cacagattgcagttaac 18562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 21366785 - 21366569
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||  ||| || ||| ||||||    
T  21366785 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattatactt-catcatatca 21366687  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||     
T  21366686 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttca 21366587  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  |||||||||||    
T  21366586 cagatctcagttaacatc 21366569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 24767662 - 24767493
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |||||| | | ||||||||||||||||||| ||||| ||||||||||||||| ||| || |||| || |||||||||||||    
T  24767662 catcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaatagtataactttataatatcaattc 24767563  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24767562 atttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 24767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 24221873 - 24222078
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | ||    
T  24221873 tcaacaacatcttattcatcatgtatagactcatgcaacctagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaaca 24221972  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  24221973 attcatttcaacaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttca 24222072  T
Q  212 cagatt 217  Q
    ||||||    
T  24222073 cagatt 24222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 20766970 - 20767185
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  || |||||||||||| ||||| ||||||||||||    
T  20766970 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcaaatcacaacaacaacataagttcataatatca 20767069  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||  | |||||||  | |||| |||||| ||     
T  20767070 attca-ttcaacaacatctagatcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaacaacttagtagttca-aacagcctca 20767167  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  20767168 cagatttcagttaacatc 20767185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 20805548 - 20805763
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  |||||||||| ||||  |||||||||||||||||    
T  20805548 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaagaacaaaataatttcataatatca 20805647  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||  |  |||||| || |||| |||||| ||     
T  20805648 attca-ttcaacaacatctagatcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaataacttagcagttca-aacagcctca 20805745  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  20805746 cagatttcagttaacatc 20805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 23451344 - 23451559
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||| ||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| |||||||||||||||||||||  ||| || ||||| ||||    
T  23451344 tcaacattatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatactt-cataacatca 23451442  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||||| |||||| ||||||||| ||| || ||||||| || |||| |||||| ||     
T  23451443 attcttttcaacaacatcataatcattcaataatatttcaagtaatgcatttaatcgttaaatcactttacaaacaacttagcagttca-aacagcctca 23451541  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  23451542 cagatttcagttaacatc 23451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 1859097 - 1858929
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| |||||||||||||||||||||  ||| || ||||| | ||    
T  1859097 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatactt-cataacaaca 1858999  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacatta 181  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  1858998 attcatttcaacaacatcataatcattcaataatatttcaagtaatgcatttaatcgttaaatcacatta 1858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 23458588 - 23458803
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  || | |||||||||||||||||||||  ||| || ||||| | ||    
T  23458588 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaacactatactt-cataacagca 23458686  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| |||||||| |||| | |||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| ||     
T  23458687 attcttttcaacagcatcataatcattcaataatatttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctca 23458785  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  23458786 cagatttcagttaacatc 23458803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 23462849 - 23463064
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  || | |||||||||||||||||||||  ||| || ||||| | ||    
T  23462849 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaacactatactt-cataacagca 23462947  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| |||||||| |||| | |||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| ||     
T  23462948 attcttttcaacagcatcataatcattcaataatatttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctca 23463046  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  23463047 cagatttcagttaacatc 23463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 22757148 - 22757339
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| | |||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  22757148 gactcatgtaacttagttaaataacagcagcaacataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 22757247  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | ||||||| ||||||||||||| |||||| ||||||||||||| || ||||||| || ||| ||||| |||| ||| |  |||||||||||    
T  22757248 tcaataataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacttcacaggtctcagttaacatc 22757339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 123399 - 123209
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |||||||||| | | ||||||| |||||||||||||    | ||    
T  123399 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacattataatttcatcacaacaattcattttcaacaacatcaaagttat 123300  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || |||| ||||||||||||| |||||| ||||||||||||| || || ||||||| ||||||||||| || |||||  |||||||||||    
T  123299 tcaagaataattcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacaattcataacagcctcacagatctcagttaacatc 123209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 12028659 - 12028468
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  12028659 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 12028560  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |  | |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  12028559 tcgagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 12028468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 26680578 - 26680759
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||  |||| |||||||||||||||||| || |||||||||||| || ||    
T  26680578 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacaacagcagcataatcagatcacaacatcatcataatttcatagtaaca 26680677  T
Q  112 attcatttcaacaacatc-ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    ||||||||||| ||||||   | | ||| || |||| ||||||||||||| || ||| ||||||||||||| || |||||||    
T  26680678 attcatttcaataacatcaaggtttattcaagaataattcaagtaatgcatttgatcgttaaatcacattacaaacaactta 26680759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 192
Target Start/End: Original strand, 26952185 - 26952366
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||  |||| |||||||||||||||||| || |||||||||||| || ||    
T  26952185 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacaacagcagcataatcagatcacaacatcatcataatttcatagtaaca 26952284  T
Q  112 attcatttcaacaacatc-ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    ||||||||||| ||||||   | | ||| || |||| ||||||||||||| || ||| ||||||||||||| || |||||||    
T  26952285 attcatttcaataacatcaaggtttattcaagaataattcaagtaatgcatttgatcgttaaatcacattacaaacaactta 26952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 18356033 - 18356136
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  18356033 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 18356132  T
Q  204 cagc 207  Q
    ||||    
T  18356133 cagc 18356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 20911200 - 20911097
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  20911200 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 20911101  T
Q  204 cagc 207  Q
    ||||    
T  20911100 cagc 20911097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 21873250 - 21873462
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||| |||||| |||||||||||||||||||  |||| ||||  |||   |||||| |||||| | ||||||||||||    
T  21873250 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataacaaaagcagcataggcaggatacaacatcagcatgacttcataatatca 21873349  T
Q  112 at-tcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    || ||||||   ||||||||| | |||| |||||||| | ||||||||||  ||| ||||| ||||||| ||| ||||| ||||||||||||||||||||    
T  21873350 atctcattt---caacatcttaaccattcaataatatcttaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagctt 21873445  T
Q  210 cgcagattgcagttaac 226  Q
    | |||||||||||||||    
T  21873446 cacagattgcagttaac 21873462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 39 - 206
Target Start/End: Complemental strand, 17919245 - 17919078
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| ||   ||||||||||| | ||||||| |||||||||||||  | | ||    
T  17919245 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcattgtaatttcataacaacaattcattttcaacaacatcaaggttat 17919146  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacag 206  Q
    | || ||||  |||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||    
T  17919145 tcaagaataaatcaagtaatgcatttaatctttaaatcacattacaa-caacttaacaattcataacag 17919078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 10753111 - 10753206
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 205  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  10753111 caattcattttaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 10753206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 188
Target Start/End: Original strand, 17410459 - 17410602
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||| | ||||        |||||||||| ||| ||||| |||||||||    
T  17410459 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaat--------atcaattcatcttcgacaacttcttgatca 17410550  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaa 188  Q
    || ||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  17410551 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatcaa 17410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 23535674 - 23535520
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcat 137  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        ||||||||||||||||||  ||||||||||    
T  23535674 agactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcatttcaacaatttcttgatcat 23535583  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    | ||||||| || ||||||||||||  |||| ||||||||  ||||||| ||||| |||||||||    
T  23535582 tcaataataattaaagtaatgcaatctatcaataaatcac-gtataatc-acttagcatttcata 23535520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 14079283 - 14079361
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| |||||||||||||||    
T  14079283 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataagagcttcacagattgcagttaac 14079361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 11225107 - 11225178
Alignment:
Q  136 atttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11225107 atttaataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11225178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 31342143 - 31342221
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaa 90  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  31342143 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaa 31342221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 20295876 - 20296005
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  20295876 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 20295967  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  20295968 attcaagtaatgcaatcaatcaataaatcacattataa 20296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 11220525 - 11220592
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11220525 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11220592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 11228934 - 11229001
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11228934 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11229001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 11230923 - 11230990
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11230923 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11230990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 10753439 - 10753515
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  10753439 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 10753515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 15236865 - 15236684
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  15236865 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 15236774  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     || |||| ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  15236773 caagaataattcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 15236684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 19472797 - 19472668
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  19472797 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 19472706  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     || |||||||||||| ||||| |||||||||||||||    
T  19472705 atttaagtaatgcaatcaatcaataaatcacattataa 19472668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 11226944 - 11227011
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||| ||||    
T  11226944 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcatatcagc 11227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 37724008 - 37724117
Alignment:
Q  118 ttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagat 216  Q
    |||| ||||||||  |||||| | | ||| |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||| ||||||||| |||||    
T  37724008 ttcatcaacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaacagcttcacagat 37724107  T
Q  217 tgcagttaac 226  Q
    ||||||||||    
T  37724108 tgcagttaac 37724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 40723916 - 40723849
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||  ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  40723916 aataatattttgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 40723849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23572082 - 23572160
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||| |||||||||| ||| |||||| ||||||||||| ||||||| || || ||||  |||||||||||||||    
T  23572082 aacatcatcttaatcatcttatatggactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 23572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 23201500 - 23201581
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  |||| | ||| ||||| |||||| |||||||||||||| |||||||||||||||    
T  23201500 atttcaagtaatgcaattaaacatcatctcacgtcatattcaacattaacaattcataacagcttcacagattgcagttaac 23201581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 23501332 - 23501251
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  |||||| ||| ||||| |||||| |||||||||||||| ||||||||| |||||    
T  23501332 atttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacaattcataacagcttcacagattgcaattaac 23501251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 18770122 - 18770042
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||  ||||||| ||||||||||  ||||| |||||||||    
T  18770122 tcaacatcatcttaatcatcttatatcgactcatgcaacttggtcgaataacaatagcaacataggcagattacaacaaca 18770042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 22032319 - 22032382
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacata 75  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||    
T  22032319 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 22032382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 229
Target Start/End: Original strand, 18356390 - 18356529
Alignment:
Q  89 aacagcataatttcataatatcaatt-catttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatca 187  Q
    |||||||| || | |||||||||||| || ||||||||||||||||  ||| ||  || | | |||||||||| | || ||||| |||||||||||||||    
T  18356390 aacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgca-taaaacattatatcacattataatca 18356488  T
Q  188 acttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     |||||||||||| || |||||| ||| |  |||||||||||    
T  18356489 -cttaacatttcacaatagcttcacagttctcagttaacatc 18356529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23201356 - 23201436
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |  ||||||| ||| |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  23201356 tcaacatcatcttgttcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 23201436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 31342254 - 31342301
Alignment:
Q  144 atatttcaagtaatgcaattaatcattaaatcacattataatcaactt 191  Q
    ||| |||||||||||||||||||| ||||||||||||| || ||||||    
T  31342254 ataattcaagtaatgcaattaatcgttaaatcacattacaaacaactt 31342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 18355979 - 18356025
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||| ||||||||||||||||||| | |||||||||||| ||||||    
T  18355979 actcatgcaacttagttaaataacaattgcaacataatcaaatcaca 18356025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23501476 - 23501418
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagca 70  Q
    ||||||||||| | |||||||| ||| |||||| ||||||| ||||||||||| |||||    
T  23501476 tcaacatcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagca 23501418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 14079145 - 14079226
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| |||||||||| |||  | ||| ||||| ||||||||||||| ||||| ||||  |||||  |||||||||    
T  14079145 tcaacatcatcttaatcatcttatatcaattcatgcaacatagttaaataacaatagcagcataggcagattgcaacaacag 14079226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 21340852 - 21340804
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  21340852 agactcatgcaacttagttaaataacatttgcagcataatcaaatcaca 21340804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 26742832 - 26742784
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  26742832 agactcatgcaacttagttaaataacatttgcagcataatcaaatcaca 26742784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 16488198 - 16487981
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| | |||||||| ||||||||||||    
T  16488198 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaaaagcagcataacttcataatatca 16488099  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  ||||||     
T  16488098 attcttttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttca 16487999  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  || ||||||||    
T  16487998 cagatctcaattaacatc 16487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 16357072 - 16356856
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  16357072 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataatttcataatatca 16356973  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||  |||||| || |||| |||||||||     
T  16356972 attcatttccacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaaaaacttagcagttca-aacagcttca 16356874  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  16356873 cagatttcagttaacatc 16356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 13813139 - 13812966
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| || ||||||  | || ||||||||||||    
T  13813139 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagattaccacaacattaaaacttcataatatca 13813040  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13813039 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 13812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 16348784 - 16348568
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  16348784 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataatttcataatatca 16348685  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||| ||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||| || ||||||| || || | || ||||||     
T  16348684 attcatttccacaacatcttgataattcaataatattttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aaaagcttca 16348586  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  16348585 cagatttcagttaacatc 16348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 15353428 - 15353210
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| | ||    
T  15353428 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacagcagcaacataatcagatcacagcaacatcataatttcataacaaca 15353329  T
Q  112 attcatttcaacaacatc-ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||||||||||||||||   ||| ||| || ||||  |||||||||||| |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  15353328 attcatttcaacaacatcaaggattattcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttc 15353229  T
Q  211 gcagattgcagttaacatc 229  Q
     || ||| |||||||||||    
T  15353228 acaaattccagttaacatc 15353210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 5339088 - 5338884
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaaca 124  Q
    ||||||||||||||||||| ||| | ||||||||||||| || || || || ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  5339088 atcatcttgtatagactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaacagcataacttcataattatcaattcatttcaaca 5338989  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagtta 224  Q
    | |||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||| |||||| || |||    
T  5338988 aaatcttgattattcaataatatctcaagtaatgcaattaatcaataaatcacatcataatcagcttaatggttcataacagcttctcagatttcattta 5338889  T
Q  225 acatc 229  Q
    |||||    
T  5338888 acatc 5338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 20157568 - 20157407
Alignment:
Q  24 taatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaac 123  Q
    |||||| ||| |||||||||| |||| |||||||||||||| ||||| ||||||||||||||| |||| | |||| || |||||||||||||||||||||    
T  20157568 taatcaacttatatagactcatgcaaattagttaaataacaatagcagcataatcagatcacatcaacggtataactttataatatcaattcatttcaac 20157469  T
Q  124 aacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  20157468 aacatctagatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 15093771 - 15093986
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||| |||| ||||| ||||   |||||||||||||||||| | ||||||||||||    
T  15093771 tcaacatcatcttaatcatcttgtattgactcatgcaacttagttaaagaacaatagcagcatagaaagatcacaacaacagcatgacttcataatatca 15093870  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | |||||||| ||||||| || |||||| |||||||| | ||||||||||  ||| ||||| ||||||| ||| ||||| ||||||||||||||||||||    
T  15093871 atttcatttctacaacatattaatcattcaataatatattaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagctt 15093969  T
Q  210 cgcagattgcagttaac 226  Q
    |  ||||||||||||||    
T  15093970 cagagattgcagttaac 15093986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 12570010 - 12570237
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||  || |  |||||     |    
T  12570010 tcaacatcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaacattatgacatcatataaaga 12570109  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataat----atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    |||||| | |  |||| || || ||  |||||| | | ||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12570110 tatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 12570209  T
Q  202 aacagcttcgcagattgcagttaacatc 229  Q
    ||||||||| ||||||||||||||||||    
T  12570210 aacagcttcacagattgcagttaacatc 12570237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 16351972 - 16351786
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaaca---taatcagatcacaacaacagcataatttcataata 108  Q
    |||||| |||| || ||||| ||||||||| || |||||| ||||||||||||| |||| ||   ||||||||||||||||||| ||||| ||||||| |    
T  16351972 tcaacaacatcttattcatcatgtatagacacatgcaactaagttaaataacagcagcagcagcataatcagatcacaacaacatcataaattcataaca 16351873  T
Q  109 tcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 195  Q
     ||||||||||||||||||||| | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || ||||||||||    
T  16351872 acaattcatttcaacaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaaca 16351786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 210
Target Start/End: Complemental strand, 11250655 - 11250483
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  11250655 gactcatgcaacttagttaaataacagcagcaacataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 11250556  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    | || |||| |||| |||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||    
T  11250555 tcaagaataattcatgtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttc 11250483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 43256442 - 43256339
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  43256442 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 43256343  T
Q  204 cagc 207  Q
    ||||    
T  43256342 cagc 43256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 17810293 - 17810474
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  17810293 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 17810384  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  | |||||| || ||  |||||||||||    
T  17810385 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttaacatttcaatatagcttcacaaataacagttaacatc 17810474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 36134049 - 36133885
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        ||| |||||| ||||||||| || ||||||    
T  36134049 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atccattcatcttcaacaacttcctgatca 36133958  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || |||||||  |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  36133957 ttcaataataactcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 36133885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 15125130 - 15125057
Alignment:
Q  156 atgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacat 228  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  15125130 atgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcagttaacat 15125057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 23843613 - 23843694
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23843613 tcaagtaatacaattaatcattaaaacacattataatcaacattaacatttcataacagcttcacagattgcagttaacatc 23843694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 25555550 - 25555719
Alignment:
Q  61 aacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgc 159  Q
    ||||| |||| |||||||||||||||||| ||  |||||||||||| | |||||||||| ||||||||||  | | ||| || |||| ||||||||||||    
T  25555550 aacagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttattcaagaataattcaagtaatgc 25555649  T
Q  160 aattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  25555650 atttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 25555719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 22634501 - 22634369
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataa 144  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||  ||||||||||| |||||    
T  22634501 gcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaatttcttgatcattcaataa 22634410  T
Q  145 tatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    || ||||||||||||| ||||||||||| ||||||||||||    
T  22634409 taattcaagtaatgcatttaatcattaattcacattataat 22634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 44675767 - 44675845
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  44675767 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 44675845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 9556551 - 9556688
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  9556551 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 9556642  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     |||| || ||||||||||||||| ||||| |||||||||||||||    
T  9556643 caatactaattcaagtaatgcaatcaatcaataaatcacattataa 9556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 14757507 - 14757326
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||| | ||||        |||||||||||| ||||||| || | ||||||    
T  14757507 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacaacttaat--------atcaattcattttcaacaacttcctaatcatt 14757416  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  14757415 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 14757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 15224962 - 15225035
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||| ||||||    
T  15224962 caattcattttaacaacatcttggtcattcaataatatttcaagtaatgcatttaatcattaattcatattata 15225035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 4561419 - 4561282
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        ||||||| |||| ||||||| || | ||||||    
T  4561419 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaatttattttcaacaacttcctaatcatt 4561328  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  4561327 caataataattcaagtaatgcaatcaatcaataaatcacattataa 4561282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 5756967 - 5756886
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  5756967 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 5756886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 10712928 - 10713004
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  10712928 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 10713004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 10926698 - 10926774
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  10926698 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 10926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 27534103 - 27534199
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 200  Q
    |||||||||||||||| ||| ||| |||| |||||| ||||||  ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||    
T  27534103 taatatcaattcattttcaataacttcttaatcattcaataatgattcaagtaatgcaatcaatcaataaatcacattataa-caacttagcatttca 27534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 12487802 - 12487862
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  12487802 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 12487862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 14954182 - 14954122
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  14954182 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacaatata 14954122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 25689961 - 25690021
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  25689961 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 25690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 10712633 - 10712700
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10712633 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 10926403 - 10926470
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10926403 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 12487488 - 12487555
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12487488 aataatatttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 12487555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 13569646 - 13569725
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||| ||| |  |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  13569646 ttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 13569725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 14954496 - 14954433
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  14954496 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 14954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 25689647 - 25689710
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  25689647 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 25689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 33742407 - 33742535
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcatttaataatat 147  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| | ||        | |||||||||||||||||  | |||||||| |||||||     
T  33742407 aacttagttaaataacaatagcagcataatcagattatatcaacagcttgat--------accaattcatttcaacaactccctgatcattcaataataa 33742498  T
Q  148 ttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||||||||||||| ||||| |||||||||| ||||    
T  33742499 ttcaagtaatgcaatcaatcaataaatcacataataa 33742535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 25555503 - 25555559
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagca 95  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  25555503 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcagca 25555559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 27533803 - 27533855
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    ||||||||||| ||||||||| |||||||||| ||||||||| || |||||||    
T  27533803 aataatatttcgagtaatgcatttaatcattatatcacattacaaacaactta 27533855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 15121921 - 15121843
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaa 90  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| || || ||||  ||||| |||||||    
T  15121921 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatatcagcataggcagattacaacaa 15121843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 1951791 - 1951684
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| | || ||||| || |||||| |||||||    
T  1951791 taataacaattcattttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataatttactttatattc-acttaaaatttcat 1951693  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  1951692 aaaagcttc 1951684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 1951847 - 1951799
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  1951847 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 1951799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 15225190 - 15225222
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  15225190 aataatatttcaagtaatgcatttaatcattaa 15225222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 17152516 - 17152464
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaa 156  Q
    ||||| ||||||||||||||||   |||||||||| ||||||| |||||||||    
T  17152516 taataacaattcatttcaacaattccttgatcattcaataataattcaagtaa 17152464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 17152572 - 17152524
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  17152572 agactcatgcaacttagttaaataacatttgcagcataatcaaatcaca 17152524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 18222464 - 18222416
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  18222464 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 18222416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 46847 - 46633
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || || |||| ||  |||||| |||||||||||| |||||| ||||| ||||  ||||||||||||| ||||||| ||||||||||||    
T  46847 tcaacatcatcttattcgtcttataatgactcatgcaacttagttacataacaatagcagcataggcagatcacaacaatagcataacttcataatatca 46748  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  46747 attcatttccacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttca 46648  T
Q  212 cagattgcagttaac 226  Q
    |||||||||||||||    
T  46647 cagattgcagttaac 46633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 1490 - 1706
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||   || | ||||| ||||||    
T  1490 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaactttat-acttcatcatatca 1588  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||     
T  1589 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttca 1688  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  |||||||||||    
T  1689 cagatctcagttaacatc 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 18384036 - 18383820
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||  ||| || ||| ||||||    
T  18384036 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattatactt-catcatatca 18383938  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||     
T  18383937 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattaaaatcagcttaacagttcataacagcttca 18383838  T
Q  212 cagattgcagttaacatc 229  Q
    | |||  |||||||||||    
T  18383837 ctgatctcagttaacatc 18383820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 322588 - 322804
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||| |  ||| || ||| ||||||    
T  322588 tcaacatcatcataatcatcttgtatagactcatgcaacttagttaaataacaatagcggcataatcagatcacaacaatattatactt-catcatatca 322686  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  322687 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacacttcataacagcttca 322786  T
Q  212 cagattgcagttaacatc 229  Q
    |||||   ||||||||||    
T  322787 cagatcttagttaacatc 322804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 11851577 - 11851794
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||| | |||||| ||||||||||||||  |||| ||||||||||||    
T  11851577 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacgatagtagcataattagatcacaacaacattataacttcataatatca 11851676  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||     
T  11851677 attcatttcaacaacatcttgttcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttca 11851776  T
Q  212 cagattgcagttaacatc 229  Q
    || ||| ||| |||||||    
T  11851777 caaatttcagataacatc 11851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 11862790 - 11862994
Alignment:
Q  13 caacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaa 112  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||| | || |  |||| |||||||||||||    
T  11862790 caacatcatcttaatcatcttgtaaagactcatgcaacttagttaaataacaatagcagcataatcagatcaccaaaatattataacttcataatatcaa 11862889  T
Q  113 ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgc 212  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |    
T  11862890 ttcatttcaacaacatcttggtcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcac 11862989  T
Q  213 agatt 217  Q
    |||||    
T  11862990 agatt 11862994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 12038072 - 12037885
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||| |||| ||||| |||||||||||||||||||  |||| |||||||||||||||||||||  |||||||||||| | ||    
T  12038072 tcaacatcatcttaatcatcttatataaactcatgcaacttagttaaataacaa-agcagcataatcagatcacaacaacattataatttcataacaaca 12037974  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 200  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12037973 attcatttcaacaacatcttgatcattcaataatatctcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 12037885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 12496253 - 12496470
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atc 110  Q
    ||||||||||| || ||||||| ||  |||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||||||| |||    
T  12496253 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaacagcataacttcataattatc 12496352  T
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||    
T  12496353 aattcatttctacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttc 12496451  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||| |||||||||||    
T  12496452 acagatttcagttaacatc 12496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 19726017 - 19725815
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    |||||||| ||  |||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||| | | ||||||||||||||||||||||||    
T  19726017 atcatcttataatgactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcatgact-cataatatcaattcatttcaacaa 19725919  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||| ||| |||||| ||||| |    
T  19725918 catcttgatcattcaataatatttcaagtaatgtaattaatcattaaatcacattataatcagcttaacagttcatagcagtttcacagatttcagttga 19725819  T
Q  226 catc 229  Q
    ||||    
T  19725818 catc 19725815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 225
Target Start/End: Complemental strand, 11298648 - 11298436
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||||||||    
T  11298648 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacaacataatttcataatatca 11298549  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| ||     
T  11298548 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctca 11298450  T
Q  212 cagattgcagttaa 225  Q
    || ||| |||||||    
T  11298449 caaatttcagttaa 11298436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 14665401 - 14665570
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||| || | |||||||||||    
T  14665401 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcaacataatcagatcacatcaacagtataactttaaaatatcaattc 14665500  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14665501 atttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 14665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 14668557 - 14668726
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||| |||| || |||||||||||||    
T  14668557 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagtataactttataatatcaattc 14668656  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  14668657 atttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcatattataat 14668726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 1982916 - 1982714
Alignment:
Q  27 tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaa 125  Q
    ||||| |||||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||  |||| ||||||| | ||||||| |||||||||    
T  1982916 tcatcatgtatagactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaacactataacttcataacaacaattcattttcaacaa 1982817  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||| | | ||||| || |||| ||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||| || |||||||||||    
T  1982816 catataggtcattcaaaaatagttcaagtaatgcatttaatcattaaatcacattacaat-aacttaacagttcataacaacttcacatattgcagttaa 1982718  T
Q  226 catc 229  Q
    ||||    
T  1982717 catc 1982714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 11557490 - 11557290
Alignment:
Q  27 tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaac 126  Q
    ||||| |||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||    
T  11557490 tcatcatgtataaactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaacaattcatttcatcaac 11557391  T
Q  127 atcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||   | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| ||| ||||    
T  11557390 atctaatttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagctaac 11557291  T
Q  227 a 227  Q
    |    
T  11557290 a 11557290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 11595233 - 11595042
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  11595233 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 11595134  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  11595133 tcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 11595042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 3390057 - 3389839
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| |||||||||||||||||||  |||| |||||||||||||||||| ||  |||||||||| | | ||    
T  3390057 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaacagcagcataatcagatcacaacagcattataatttcatgacaaca 3389958  T
Q  112 attca-tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||| |||||||||||||  | |  || || ||||  |||||||||||| |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  3389957 attcattttcaacaacatcaaggtttttcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttc 3389858  T
Q  211 gcagattgcagttaacatc 229  Q
     ||| |  |||||||||||    
T  3389857 acaggtctcagttaacatc 3389839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 3403077 - 3402859
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| |||||||||||||||||| ||  |||||||||| | | ||    
T  3403077 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataatcagatcacaacagcattataatttcatgacaaca 3402978  T
Q  112 attca-tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||| |||||||||||||  | | ||| || ||||  ||||| |||||| |||||||||||||||||||| || || ||||||| ||||||| ||||||    
T  3402977 attcattttcaacaacatcaaggttattcaagaataaatcaaggaatgcatttaatcattaaatcacattacaaacagcttaacaattcataatagcttc 3402878  T
Q  211 gcagattgcagttaacatc 229  Q
     ||| |  |||||||||||    
T  3402877 acaggtctcagttaacatc 3402859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 20461587 - 20461423
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||| | ||||        |||||||||| ||||||||| |||||||||    
T  20461587 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaat--------atcaattcatcttcaacaacttcttgatca 20461496  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  20461495 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 20461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 229
Target Start/End: Complemental strand, 2897910 - 2897727
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||        ||||||| |||| || |||| |||||||||    
T  2897910 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat--------atcaatttattttcatcaacttcttgatca 2897819  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    || ||||||| ||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  |||||||||||    
T  2897818 ttcaataataattccagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttaacagttaacatc 2897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 5223140 - 5223243
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  5223140 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 5223239  T
Q  204 cagc 207  Q
    ||||    
T  5223240 cagc 5223243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 12339542 - 12339645
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  12339542 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 12339641  T
Q  204 cagc 207  Q
    ||||    
T  12339642 cagc 12339645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 4589132 - 4589035
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  4589132 caattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 4589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 15482682 - 15482846
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||||| ||||||  |||||| ||    
T  15482682 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcattttcaacaatttcttgagca 15482773  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  15482774 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 15482846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 11300795 - 11300692
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| |||| || ||||||| || |||||||    
T  11300795 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcaaattacaaacaacttagcagttcataa 11300696  T
Q  204 cagc 207  Q
    ||||    
T  11300695 cagc 11300692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 15464941 - 15465044
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||    
T  15464941 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataa 15465040  T
Q  204 cagc 207  Q
    ||||    
T  15465041 cagc 15465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 7793437 - 7793272
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataat-cagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatc 135  Q
    ||||||| ||||||||||||| ||||| ||||| |||||| ||||||||| ||||||| ||||        |||||||||| ||||||||| ||||||||    
T  7793437 agactcatgcaacttagttaattaacaatagcagcataattcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatc 7793346  T
Q  136 atttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||| ||||||| ||||||||||||||| |||||  |||||||||||||||| ||||| |||||||||| ||||||    
T  7793345 attcaataataattcaagtaatgcaatcaatcaacaaatcacattataatc-acttagcatttcataatagcttc 7793272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 19775515 - 19775612
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  19775515 caattcattttaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 19775612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 42325964 - 42326136
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||| ||||| |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  42325964 gactcatgcaacttagttaaaaaacagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 42326063  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |  | |||| ||||||||||||| |||||| ||||||||||||| || ||| |||||| ||| ||||| ||||    
T  42326064 tcgagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaagttaacagttcttaacaacttc 42326136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 12172936 - 12173007
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  12172936 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacatttcataacagcttcacagatt 12173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 327252 - 327087
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataa-tcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatc 135  Q
    ||||||| ||||||||||||| ||||| ||||| ||||| | |||||||| ||||||| ||||        |||||||||| ||||||||  ||||||||    
T  327252 agactcatgcaacttagttaattaacaatagcagcataactaagatcacatcaacagcttaat--------atcaattcatcttcaacaatttcttgatc 327161  T
Q  136 atttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||| ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  327160 attcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 327087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 12172792 - 12172872
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  12172792 tcaacatcatcataatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 12172872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 15060427 - 15060507
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||    
T  15060427 tcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataatagcttcacagattgcagttaccatc 15060507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 16909885 - 16909965
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  16909885 tcaagtaataaaattaatcattaaatcacattataatcaacttaacaattcataaaagcttcacagattgcagttaacatc 16909965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 30065970 - 30066151
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  30065970 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 30066061  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  30066062 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 30066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 15051655 - 15051731
Alignment:
Q  153 gtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||    
T  15051655 gtaatgaaattaatcattaaatcacattataatcaacttaacagttcataatagcttcacaaattgcagttaacatc 15051731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 16369543 - 16369623
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| || |||| ||||||||||    
T  16369543 tcaagtaatgaaattaatgattaaatcacattataatcaacttaacagttcataacagcttcacatattggagttaacatc 16369623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 11165606 - 11165477
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | |||||| |||||||    
T  11165606 aacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcattcaataata 11165515  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  11165514 attcaagtaatgcaatcaatcaataaatcacattataa 11165477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 15617398 - 15617535
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||  || ||||||||    
T  15617398 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaagttcctgatcatt 15617489  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||| ||| ||||| |||||||||||||||    
T  15617490 caataataattcaagtaatgtaatcaatcaataaatcacattataa 15617535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 23053208 - 23052999
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||| ||| |||||||||| |||||||||| ||||| ||||||||||||| ||||| ||||| |||||||||||||||  || |  |||||     |    
T  23053208 tcaacattatcttaatcatcttatatagactcatgcaacatagttaaataacaatagcagcataagcagatcacaacaacattatgacatcatataaaga 23053109  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataat-----atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 200  Q
    |||||| | |   ||| || |||||  |||||| | | ||     ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  23053108 tatcaaataaaagcaagcatcatctcaatcattcattcattaatcatttcaagtaatgcaattaataattaaatcacattataaacaacttaaaatttca 23053009  T
Q  201 taacagcttc 210  Q
    ||| ||||||    
T  23053008 taatagcttc 23052999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 55022899 - 55023072
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| |||||  |||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | |||||| |||||||    
T  55022899 aacttagttaaataacaatagcagtataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcattcaataata 55022990  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  55022991 attcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 55023072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 7109730 - 7109859
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  7109730 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 7109821  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  7109822 attcaagtaatgcaatcaatcaataaatcacattataa 7109859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 7113665 - 7113794
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  7113665 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 7113756  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  7113757 attcaagtaatgcaatcaatcaataaatcacattataa 7113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 11070092 - 11070229
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  11070092 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 11070183  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     || |||| ||||||||||||||| ||||| |||||||||||||||    
T  11070184 caagaataattcaagtaatgcaatcaatcaataaatcacattataa 11070229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 11300539 - 11300459
Alignment:
Q  105 aatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||||||||||||| ||| ||| ||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  11300539 aatatcaattcattttcaataacttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 11300459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 11854757 - 11854894
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||| ||||||| ||||| ||||||||||||| | ||||| | |||         |||||||||||| ||| ||| |||||||||||    
T  11854757 actcatgcaacttagtttaataacaatagcagcataatcagatcatatcaacaacttaac--------atcaattcattttcaataacttcttgatcatt 11854848  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  11854849 caataataattcaagtaatgcaatcaatcaataaatcacattataa 11854894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 22336751 - 22336880
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  22336751 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 22336842  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  22336843 attcaagtaatgcaatcaatcaataaatcacattataa 22336880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 23077598 - 23077518
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| |||||||||| ||||||| |||||||||||  |||||||||  |||||||||||||||    
T  23077598 tcaacatcatcttaatcatcttatatagactcatgcaacttggttaaataacaacagcaacataggcagatcacaacaaca 23077518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 27409721 - 27409592
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  27409721 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 27409630  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  27409629 attcaagtaatgcaatcaatcaataaatcacattataa 27409592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 28949756 - 28949885
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  28949756 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 28949847  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  28949848 attcaagtaatgcaatcaatcaataaatcacattataa 28949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 14499405 - 14499530
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    |||||||||||||||| ||||||| || | |||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| ||| ||| |||||||      
T  14499405 taatatcaattcattttcaacaacttcctaatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataaacaa-ttagcatttcaat 14499503  T
Q  203 acagcttcgcagattgcagttaacatc 229  Q
    | |||||| || ||  |||||||||||    
T  14499504 atagcttcacaaataacagttaacatc 14499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 4111280 - 4111204
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  4111280 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 4111204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 15965047 - 15965123
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  15965047 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 15965123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 15968971 - 15969047
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  15968971 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 15969047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 15972895 - 15972971
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  15972895 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 15972971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 16750619 - 16750543
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  16750619 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 16750543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 19775843 - 19775919
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  19775843 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 19775919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 22321744 - 22321825
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  22321744 taataccaattcattttcaacaacttcctgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 22321825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 226
Target Start/End: Original strand, 23408424 - 23408645
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| | |||||||| ||  |||||| ||||||| ||||| ||||| ||||||||||  ||||| ||||||||||| | |  |||||     |    
T  23408424 tcaacatcatcttgatcatcttatactgactcatgcaacttggttaattaacaatagcaacatagacagattacaacaacagcgtgacatcatacaacga 23408523  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataac 204  Q
    |||||||| |   ||| || |||||  |||||| | | ||| ||||||||||| |||||| ||||| ||||||| ||| |||||  |||||| |||||||    
T  23408524 tatcaattaaaagcaagcatcatctcaatcattcattcataattcaagtaatgtaattaaacattatatcacatcatattcaacactaacatctcataac 23408623  T
Q  205 agcttcgcagattgcagttaac 226  Q
    |||||| |||||||||||||||    
T  23408624 agcttcacagattgcagttaac 23408645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 37439667 - 37439591
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  37439667 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 37439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 15964749 - 15964812
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15964749 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 15968673 - 15968736
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15968673 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15968736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 15972597 - 15972660
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15972597 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15972660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 37439965 - 37439898
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  37439965 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 37439898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 856138 - 856216
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||| |||||||||| ||| |||||| ||||||||||| ||||||| ||||||||||  ||||| |||||||||    
T  856138 aacatcatcttaatcatcttatatcgactcatgcaacttagttgaataacaatagcaacataggcagattacaacaaca 856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 8489501 - 8489420
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaata--atatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||||||||||||||||| ||||  ||||||| || |||||| ||||| ||||||||||| ||||    
T  8489501 taataacaattcatttcaacaacatcttgatcattcaataatatatttcgagcaatgcatttaataattaaatcacagtata 8489420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 4107428 - 4107352
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  4107428 taataacaattcatttcaaca---tcttgatcattcaataatatttcaactaatgcatttaatcattaattcacagtata 4107352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 26196552 - 26196500
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataaca 64  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  26196552 tcaacatcatcttaatcatcttatatagactcatgcaacttagttaaataaca 26196500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 17525137 - 17525058
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||| | | |  |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  17525137 ttcaagtaatgcaattaaacgtcatctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 17525058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 14878637 - 14878557
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||  |||||  ||||||||    
T  14878637 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcataggcagattgcaacaaca 14878557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 15878057 - 15877953
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| ||||||||||| |||||||||||| ||||||| ||| |||||  |||||| |||||||| | || ||||||||||    
T  15878057 caacatctcaatcattcattcataattcaagtaatgaaattaatcattatatcacatcatattcaacactaacatctcataacaacatcacagattgcag 15877958  T
Q  222 ttaac 226  Q
    |||||    
T  15877957 ttaac 15877953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 14878493 - 14878412
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| | | |  | |||| ||| ||||| |||||||||||||| |||||| |||||||||||||||    
T  14878493 atttcaagtaatgcaattaaacttcatcttacatcatattcaacattaacatttcataatagcttcacagattgcagttaac 14878412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11854493 - 11854545
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaa 156  Q
    ||||| |||||||||||||||||||||| ||| || ||||||||||| |||||    
T  11854493 taataacaattcatttcaacaacatcttaatctttcaataatatttcgagtaa 11854545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 15878172 - 15878092
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| | |||||||| ||  |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  15878172 tcaacatcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 15878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 15850113 - 15850008
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||  ||||  ||||||||||| || |||| ||||||| ||||||| ||||  || |||||| ||||||| | ||| ||||||||||    
T  15850113 taataacaattcattttcacaatttcttgatcattcaacaataattcaagttatgcaatcaatccatatatcacaatataatc-atttagcatttcataa 15850015  T
Q  204 cagcttc 210  Q
     ||||||    
T  15850014 aagcttc 15850008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 30029867 - 30029924
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcat 96  Q
    |||||| ||||||||||| ||||||| ||||| ||||  ||||| |||||||||||||    
T  30029867 gactcatgcaacttagtttaataacaatagcagcatagacagattacaacaacagcat 30029924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 15060280 - 15060360
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| || |||||||  |  |||||| ||||||| ||||||||||| ||||| ||||  ||| |||||||||||    
T  15060280 tcaacatcatcttattcatcttacaatgactcatgcaacttggttaaataacaatagcagcataggcagttcacaacaaca 15060360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 16749992 - 16749960
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  16749992 aataatatttcaagtaatgcatttaatcattaa 16749960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 16750190 - 16750158
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  16750190 aataatatttcaagtaatgcatttaatcattaa 16750158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 16750388 - 16750356
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaa 172  Q
    ||||||||||||||||||||| |||||||||||    
T  16750388 aataatatttcaagtaatgcatttaatcattaa 16750356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 7e-73; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 22812032 - 22811814
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||  |||| ||||| ||||||    
T  22812032 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcaaatcacaacaacattataacttcatcatatca 22811933  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaa-ttaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||    
T  22811932 attcatttcaacaacatcttgatcattcaataatacttcaggtaatgcaatttaatcattaaatcacattataatcaacttaatagttcatagcagcttc 22811833  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||| || ||||||||    
T  22811832 acagatttcacttaacatc 22811814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 25963836 - 25963620
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  25963836 tcaacatcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataatttcataatatca 25963737  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||||||     
T  25963736 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttca 25963638  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| || ||||||||    
T  25963637 cagatttcaattaacatc 25963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 21916219 - 21916068
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||| ||||||| ||||||||||||    
T  21916219 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaaaaacaacataatcagatcacaacaaaagcataaattcataatatca 21916120  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaatt 163  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21916119 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcaatt 21916068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 24655459 - 24655254
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||    
T  24655459 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaacatcataatttcataacaaca 24655360  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  24655359 attcatttcaacaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttca 24655260  T
Q  212 cagatt 217  Q
    ||||||    
T  24655259 cagatt 24655254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 24174796 - 24175001
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | ||    
T  24174796 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaaca 24174895  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  24174896 attcatttcaacaacatctagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttca 24174995  T
Q  212 cagatt 217  Q
    ||||||    
T  24174996 cagatt 24175001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 21327688 - 21327471
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atc 110  Q
    |||||| |||| || |||||||||||||||||| ||||||| |||||||||||  |||| ||||||||||||||| || |||||||| |||||||| |||    
T  21327688 tcaacaacatcttattcatcttgtatagactcatgcaacttggttaaataacaaaagcagcataatcagatcacagcagcagcataacttcataattatc 21327589  T
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||||| ||||||||||||| ||| || ||||| |||||||||||||||||||| |||||||||| |||| || ||||| | ||||||||||||||    
T  21327588 aattcatttctacaacatcttgattattcaacaatatctcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcataacagcttc 21327489  T
Q  211 gcagattgcagttaacat 228  Q
     |||| | || |||||||    
T  21327488 acagaattcacttaacat 21327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 21318742 - 21318558
Alignment:
Q  27 tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaacaa 125  Q
    |||||||||||||||||| ||||||| |||||||||||  |||| |||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||    
T  21318742 tcatcttgtatagactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacagcagcataacttcataattatcaattcatttctacaa 21318643  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||||||| ||| || ||||| |||||||||||||||||||| |||||||||| |||| || ||||| | |||||| |||||||    
T  21318642 catcttgattattcaacaatatctcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcatagcagcttc 21318558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 22799247 - 22799032
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | ||||||||||||    
T  22799247 tcaacatcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacatcatgacttcataatatca 22799148  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | ||||||||||||||||||| |||||| |||||||| | |||||| |||  ||| ||||| ||||||| ||| ||||| ||||||||||||||||||||    
T  22799147 atttcatttcaacaacatcttaatcattcaataatatcttaagtaaggcacataa-cattatatcacatcatattcaacattaacatttcataacagctt 22799049  T
Q  210 cgcagattgcagttaac 226  Q
    | || ||||||||||||    
T  22799048 cacaaattgcagttaac 22799032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 25961628 - 25961438
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||||||  |||| ||||||| | |||||||||| ||||||||||| ||||||    
T  25961628 gactcatgcaacttagttaaataacaacagcagcataatcagatcacaacaacattataacttcataacaacaattcattttcaacaacatctagatcat 25961529  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || |||| ||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||  ||| || ||||||| |||||||    
T  25961528 tcaagaataattcaagtaatgcatttaatcattaaatcacattacaa-caacttaacagttcataacaaattcacatattgcagctaacatc 25961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 37524685 - 37524881
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    ||||||||||||||||||| ||||||| |||||||||||  |||| ||||||||||||||| |||||   ||| ||||||| | ||||||||||||| ||    
T  37524685 atcatcttgtatagactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaacattgtaacttcataacaacaattcatttcaataa 37524784  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||| |||||||||||||||||||||       |||||||||||||||||||| | ||||| |||||| ||||||| |||| | || ||||    
T  37524785 catcttgatcattcaataatatttcaagtaatgca-------attaaatcacattataatcagcctaacagttcatagcagcttcacagacttcaattaa 37524877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 24716649 - 24716434
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| |||||||||||||||||||||  ||| || ||||| | ||    
T  24716649 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacattatactt-cataacaaca 24716551  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||||||||||| | |||||| |||||||| || ||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| ||     
T  24716550 attcatttcaacaacatcataatcattcaataatatgtctagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctca 24716452  T
Q  212 cagattgcagttaacatc 229  Q
    ||| || |||||||||||    
T  24716451 caggtttcagttaacatc 24716434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 24869876 - 24870069
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||| | ||||| ||||||| | ||    
T  24869876 tcaacaacatcttattcatcatgtatagactcatgcaacttagttaaataacaacagcagcataatcagatcacaacaaaatcataaattcataacaaca 24869975  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 205  Q
    ||||||||||||||||||| | | ||| || |||| ||| ||||||| | |||||| ||||||||||||| || ||||||| || ||| |||||    
T  24869976 attcatttcaacaacatctagtttattcaagaataattcgagtaatgtatttaatcgttaaatcacattacaaacaacttagcagttcttaaca 24870069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 23019824 - 23019618
Alignment:
Q  15 acatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaa-t 113  Q
    |||||||| |||||||||| ||| ||||||   ||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | ||||||||||||| |    
T  23019824 acatcatcttaatcatcttatattgactcataaaacttagttaaataacaatagcagcataggcagatcacaacaacaacatgacttcataatatcaatt 23019725  T
Q  114 tcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgc 212  Q
    |||||||||||||||||| |||||| |||||||| | ||||||||||  ||| | ||| ||||||| ||| ||||| |||||||||||||| |||||| |    
T  23019724 tcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcataaaagcttcac 23019626  T
Q  213 agattgca 220  Q
    | ||||||    
T  23019625 aaattgca 23019618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 40428486 - 40428677
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcat 137  Q
    |||||| ||||||||||| |||||||  |||| |||| |||||||||||||| |  |||| ||||||||| |||||||||| ||||||||||  | | ||    
T  40428486 gactcatgcaacttagttcaataacaaaagcagcatattcagatcacaacaatattataacttcataataacaattcattttcaacaacatcaaggttat 40428585  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||| ||||  |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||    
T  40428586 ttaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatc 40428677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 24735422 - 24735586
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  24735422 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatca 24735513  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  24735514 ttcaataataattcaagtaatgcgatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 24735586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 31344953 - 31345056
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||| || ||||||| || |||||||    
T  31344953 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcatgaaatcacattacaaacaacttagcagttcataa 31345052  T
Q  204 cagc 207  Q
    ||||    
T  31345053 cagc 31345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 10101730 - 10101549
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  10101730 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 10101639  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  10101638 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 10101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 24673709 - 24673792
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||| ||| ||||||||    
T  24673709 atttcaagtaatgcaattaatcattaaatcacagtataatcagcttaacatttcataatagcttcacagatcgcaattaacatc 24673792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 19688779 - 19688679
Alignment:
Q  110 caattcat-ttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 208  Q
    |||||||| ||||||||  ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  19688779 caattcatcttcaacaatttcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 19688681  T
Q  209 tc 210  Q
    ||    
T  19688680 tc 19688679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 22741085 - 22740866
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| | |||||||| ||| |||||| ||||||  ||||||||||| ||||| ||||  ||||| |||||||||| || |  ||| |     |    
T  22741085 tcaacatcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacagtatgacatcacataacga 22740986  T
Q  107 tatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataaca 205  Q
    |||||||  |   |||||||||||| |||||| | | ||| |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||||||    
T  22740985 tatcaataaaaa-caacaacatcttaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataaca 22740887  T
Q  206 gcttcgcagattgcagttaac 226  Q
     ||||  ||||||||||||||    
T  22740886 acttcaaagattgcagttaac 22740866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Original strand, 24649378 - 24649515
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  24649378 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 24649469  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  24649470 caataataattcaagtaatgcaatcaatcaataaatcacattataa 24649515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 21918288 - 21918219
Alignment:
Q  160 aattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||| |||||||||||    
T  21918288 aattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatttcagttaacatc 21918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 12901597 - 12901460
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| || || ||||||| ||||| | ||||||| ||||        |||||||||||| ||||||| || | ||||||    
T  12901597 actcatgcaacttagttaaataacaataacagcataatcggatcatatcaacagcttaat--------atcaattcattttcaacaacttcctaatcatt 12901506  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  12901505 caataataattcaagtaatgcaatcaatcaataaatcacattataa 12901460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 27379518 - 27379381
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || ||||||||    
T  27379518 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcatt 27379427  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| || |||||||||||| ||||| |||||||||||||||    
T  27379426 caataataattaaagtaatgcaatcaatcaataaatcacattataa 27379381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 27383564 - 27383427
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || ||||||||    
T  27383564 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcatt 27383473  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| || |||||||||||| ||||| |||||||||||||||    
T  27383472 caataataattaaagtaatgcaatcaatcaataaatcacattataa 27383427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 27601825 - 27601954
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  27601825 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 27601916  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  27601917 attcaagtaatgcaatcaatcaataaatcacattataa 27601954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 22758725 - 22758622
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||  |||||||||    
T  22758725 caacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcag 22758626  T
Q  222 ttaa 225  Q
    ||||    
T  22758625 ttaa 22758622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 41531035 - 41530958
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||||||||   ||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  41531035 taataacaattcatttcaaca---tcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 41530958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 1283464 - 1283540
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  1283464 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 1283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 30345022 - 30344946
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  30345022 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 30344946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 41531333 - 41531266
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  41531333 aataatatttngagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 41531266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 30345320 - 30345253
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  30345320 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 30345253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 24628508 - 24628427
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| |||||||||| ||||||| || |||||||| ||||||| |||||| |||||||| ||||| |||||||||||||||    
T  24628508 taataccaattcattttcaacaacttcctgatcattcaataataattcaagcaatgcaatcaatcaataaatcacattataa 24628427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 24673565 - 24673645
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||||| ||||||| ||||| | ||||||||||| ||||| || || |||||||||| ||||    
T  24673565 tcaacatcatcttaatcatcttgtacagactcatgcaacatggttaaataacaatagcagcacaagcagatcacaataaca 24673645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 1283166 - 1283233
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||| |||||||||| || ||||||| || |||||||||||    
T  1283166 aataatatttcgagtaatgcatttaatcatttaatcacattacaaacaacttagcagttcataacagc 1283233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 24680184 - 24680259
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaa 87  Q
    |||||| |||| ||||||||||||| ||||||||||||| | ||||||||||| ||||| || || ||||||||||    
T  24680184 tcaacaccatcttaatcatcttgtacagactcaagcaacatggttaaataacaatagcagcacaagcagatcacaa 24680259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 45678250 - 45678192
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagca 70  Q
    ||||||||||| |||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  45678250 tcaacatcatcttaatcatcttgtatggactcatgcaacatagttaaataacaatagca 45678192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 40622331 - 40622251
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| ||||| ||||  ||||| |||||||||    
T  40622331 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcagcataggcagattacaacaaca 40622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 15477711 - 15477761
Alignment:
Q  134 tcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  15477711 tcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 15477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 25616212 - 25616334
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcat 137  Q
    |||||| ||||||||||||||| ||| ||||| ||||  ||||| ||| ||||||||  |  | | |||||||||| || |||||||||||||| |  ||    
T  25616212 gactcatgcaacttagttaaattacaatagcagcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatat 25616311  T
Q  138 ttaataatatttcaagtaatgca 160  Q
    | |||||||| ||||||||||||    
T  25616312 tcaataatatctcaagtaatgca 25616334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 45678106 - 45678074
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcaca 178  Q
    |||||||||||||||||||||||||||||||||    
T  45678106 atttcaagtaatgcaattaatcattaaatcaca 45678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 22758840 - 22758759
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||| |||||| ||||||   |||||||||| ||||| ||||  ||||| ||||||||||    
T  22758840 tcaacatcatcttgatcatcttatatcgactcatgcaactagtttaaataacaatagcagcatagacagattacaacaacag 22758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 17232 - 17051
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  17232 tcaacatcatcttaatcatcttgtatagactcatggaacttagttaaataacaatagcagcataatcagatcacatcaacagcataacttcataatatca 17133  T
Q  112 attcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 192  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17132 attcatttccaacaacatcttgaacattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcaactta 17051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 42623 - 42835
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||   ||| ||||||||||||    
T  42623 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacat--taacttcataatatca 42720  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||   |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||     
T  42721 attcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattagaatcagcttaacagttcataacagcttca 42817  T
Q  212 cagattgcagttaacatc 229  Q
    |||||  |||||||||||    
T  42818 cagatctcagttaacatc 42835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 5581 - 5799
Alignment:
Q  12 tcaacatcatcctaa-tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatc 110  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  5581 tcaacatcatcttaactcatcatgtatagactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagtt-cataatatc 5679  T
Q  111 aattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagctt 209  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||    
T  5680 aattcattttcaacaacatcttgatcattcaataatatctcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagctt 5779  T
Q  210 cgcagattgcagttaacatc 229  Q
    |  ||||  |||||||||||    
T  5780 caaagatctcagttaacatc 5799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 6776 - 6994
Alignment:
Q  12 tcaacatcatcctaa-tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatc 110  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  6776 tcaacatcatcttaactcatcatgtatagactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagtt-cataatatc 6874  T
Q  111 aattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagctt 209  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||    
T  6875 aattcattttcaacaacatcttgatcattcaataatatctcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagctt 6974  T
Q  210 cgcagattgcagttaacatc 229  Q
    |  ||||  |||||||||||    
T  6975 caaagatctcagttaacatc 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 1596 - 1393
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    ||||||||||||||||||| ||||||||||||||||||   |||| |||||||||||||||||||||  |||| ||||||| | ||||||||||||||||    
T  1596 atcatcttgtatagactcatgcaacttagttaaataaccaaagcagcataatcagatcacaacaacattataacttcataacaacaattcatttcaacaa 1497  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||||||| ||||||| |||||||||||||| |||||  |||||||    
T  1496 catcttgatcattcaataatatttcaagtaatgcaattattcgttaagtcacattataatcagcttaacaattcataacagcttcacagatctcagttaa 1397  T
Q  226 catc 229  Q
    ||||    
T  1396 catc 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 1826 - 2042
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| | ||| ||||  ||||||||||||||||||||||||||||||||||    
T  1826 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatggcagcataggcagatcacaacaacagcataatttcataatatca 1925  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| |||     
T  1926 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttca 2024  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| | |||||||||    
T  2025 cagatttcggttaacatc 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 9509 - 9724
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||| | ||||||||||    
T  9509 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaataacaacataatcagatcacatcaacagcataact-cataatatca 9607  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| |||     
T  9608 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttca 9706  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| | |||||||||    
T  9707 cagatttcggttaacatc 9724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 12 - 225
Target Start/End: Complemental strand, 2205 - 1991
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  2205 tcaacatcatcttattcatcttttattgactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacaacataacttcataatatca 2106  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttc 210  Q
    || |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||| |||||| || ||||||| || |||||||||||||||    
T  2105 atccatttcaacaacatcttgatcattcaatgaaatttcaagtaatgcatttaatcattaaattacattacaaacaacttagcattttcataacagcttc 2006  T
Q  211 gcagattgcagttaa 225  Q
     || ||| |||||||    
T  2005 acatatttcagttaa 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 7467 - 7684
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||| | ||    
T  7467 tcaacatcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacagcaacatcataatttcataacaaca 7566  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| ||||||| || |||| ||||||||||||| ||| || ||||||| ||||| || |||||||||| ||| ||||| ||||     
T  7567 attcatttcaacaacatctagatcattcaagaataattcaagtaatgcatttattcgttaaatcgcattacaaacaacttaacagttcttaacaacttca 7666  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  7667 cagattccagttaacatc 7684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 893 - 1109
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||| ||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  893 tcaacatcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataatttcataatatca 992  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||||| ||  ||| |||||| ||     
T  993 attcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcaggtca-aacagcctca 1091  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  1092 cagatttcagttaacatc 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Original strand, 44077 - 44293
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  44077 tcaacatcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataatttcataatatca 44176  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||| ||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||| || ||||||| || || | || ||||||     
T  44177 attcatttccacaacatcttgataattcaataatattttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aaaagcttca 44275  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  44276 cagatttcagttaacatc 44293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 414171 - 413954
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||| ||||||||| || |||||||||||||||||||  |||| |||||||||||||||||||||  |||||||||||| | ||    
T  414171 tcaacatcatcttaatcatcatgtatagacgcatgcaacttagttaaataacaacagcagcataatcagatcacaacaacattataatttcataacaaca 414072  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||| |||||||||||||| ||||||| || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||     
T  414071 attcgtttcaacaacatctagatcattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttca 413972  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  413971 cagattccagttaacatc 413954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 71138 - 71241
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||||| || |||||||||| |||||||    
T  71138 taataacaattcatttcaacaacatcttgatcattcaataatatttaaaataatgcatttaatcataaaatcacattacaaacaacttaacagttcataa 71237  T
Q  204 cagc 207  Q
    ||||    
T  71238 cagc 71241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 118; Significance: 2e-60; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 422652 - 422435
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||| | ||    
T  422652 tcaacatcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataattagatcacaacaacatcataatttcataacaaca 422553  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    ||||||||||||||||||| ||||||| || |||| ||||||||||||| ||| || ||||||||||||| || |||||||| | ||| ||||| ||||     
T  422552 attcatttcaacaacatctagatcattcaagaataattcaagtaatgcatttagtcgttaaatcacattacaaacaacttaatagttcttaacaacttca 422453  T
Q  212 cagattgcagttaacatc 229  Q
    ||||||  ||||||||||    
T  422452 cagattctagttaacatc 422435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 173367 - 173473
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 202  Q
    ||||| |||||||||| ||||||  |||| |||||| ||||||| ||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||    
T  173367 taataacaattcattttcaacaatttctttatcattcaataataattcaagtaatgcaatcaatcaatatatcacaatataatc-acttagcatttcata 173465  T
Q  203 acagcttc 210  Q
    | ||||||    
T  173466 atagcttc 173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 173311 - 173359
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  173311 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 173359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 73887 - 73725
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||  || | ||||| ||||||    
T  73887 tcaacatcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacattat-acttcatcatatca 73789  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatc 175  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  73788 attcatttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatc 73725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 21629 - 21472
Alignment:
Q  72 cataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcatta 171  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21629 cataatcagatcacaacaacattataacttcataatatcaattcatttcaacaacatcttgatcattcaataatatttcaagtaatacaattaatcatta 21530  T
Q  172 aatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||| ||||||| |||||| ||||||| || ||| |||||||||||    
T  21529 aatcacattataatcagcttaacagttcatagcagcttcacaaatttcagttaacatc 21472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 80713 - 80616
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||| |||||||||||||||||||| |  ||||||| || |||||||||||    
T  80713 caattcatttcaacaacatcttgatcattcaataatatttcgagcaatgcatttaatcattaaatcacattacagacaacttagcagttcataacagc 80616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 10159 - 9990
Alignment:
Q  16 catcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattc 115  Q
    ||||||| |||||||||| |||||| | | ||||||||||||||||||| ||||| ||||||||||||||| ||| || |||| || |||||||||||||    
T  10159 catcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaatagtataactttataatatcaattc 10060  T
Q  116 atttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  10059 atttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 19399 - 19195
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaaca 124  Q
    |||||||||||||||||||  || | ||||||||||||| || || || || || |||||||||||||||||| |||||||| |||||||||||||||||    
T  19399 atcatcttgtatagactcatccatcatagttaaataacaataacagcacaagcaaatcacaacaacagcataacttcataattatcaattcatttcaaca 19300  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagtta 224  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||| |||||| || |||    
T  19299 acatcttgattattcaataatatctcaagtaatgcaattaatcaataaatcacatcataatcagcttaatagttcataacagcttcacagatttcattta 19200  T
Q  225 acatc 229  Q
    |||||    
T  19199 acatc 19195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 6521 - 6319
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    |||||||| ||  |||||| ||||| ||||||||||||| ||||| ||||   |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6521 atcatcttataatgactcatgcaacatagttaaataacaatagcagcataggaagatcacaacaatagcataatttcataatatcaattcatttcaacaa 6422  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||| ||| || |||| ||||||||| || ||| |||||||    
T  6421 catcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaagttagcagttca-aacagcttcacatatttcagttaa 6323  T
Q  226 catc 229  Q
    ||||    
T  6322 catc 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 2557 - 2339
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | ||    
T  2557 tcaacaacatcttattcatcatgtatagactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaaca 2458  T
Q  112 attcatttcaacaacatc-ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||| ||||||||||||   ||| ||| || ||||  |||||||||| | |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  2457 attcaattcaacaacatcaaggattattcaagaataaatcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttc 2358  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||| |||||||||||    
T  2357 acagattccagttaacatc 2339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 10417 - 10199
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||| |||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| | ||    
T  10417 tcaacaacatcttattcatcatgtatagactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaacatcataatttcataacaaca 10318  T
Q  112 attcatttcaacaacatc-ttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||| ||||||||||||   ||| ||| || ||||  |||||||||| | |||||||||||||||||||| || || ||||||| ||||||||||||||    
T  10317 attcaattcaacaacatcaaggattattcaagaataaatcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttc 10218  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||| |||||||||||    
T  10217 acagattccagttaacatc 10199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 2913 - 3074
Alignment:
Q  24 taatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaac 123  Q
    |||| ||||| |||||||| | ||||||||||||||||||| ||||| ||||||||||||||| |||||  |||| || |||||||||||| ||||||||    
T  2913 taataatcttatatagacttatgcaacttagttaaataacaatagcagcataatcagatcacatcaacaatataactttataatatcaattaatttcaac 3012  T
Q  124 aacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataat 185  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  3013 aacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacattataat 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 16454 - 16255
Alignment:
Q  27 tcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaac 126  Q
    ||||||| ||| |||||| ||||||||||||||||||| ||||| ||||  || |||||||||||| ||| | ||||||||||||||| |||||||||||    
T  16454 tcatcttatattgactcatgcaacttagttaaataacaatagcagcataggcatatcacaacaacatcatgacttcataatatcaattaatttcaacaac 16355  T
Q  127 atcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||| |||||| |||||||| | ||||||||||  ||| ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  16354 atcttaatcattcaataatatcttaagtaatgcacataa-cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaa 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 285 - 443
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||  |||| |||||||||||||||||||||  |||| ||||||| | ||    
T  285 tcaacatcatcttaatcatcttatatagactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaacaatataacttcataacaaca 384  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcat 169  Q
    | |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  385 atttcatttcaacaacatcttgatcattcaataatatttaaagtaatgcaattattcat 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 38600 - 38391
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | ||| ||||||||    
T  38600 tcaacatcatcttaatcatcttatattgactcatgcaacttagttaaataacaatagcagcatagacagatcacaacaacaacatgacttcttaatatca 38501  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | ||||||||||||||||||| |||||| |||||||| | ||||||||||  ||| | ||| ||||||| ||| ||||| ||||||||||||||||||||    
T  38500 atttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcataacagctt 38402  T
Q  210 cgcagattgca 220  Q
    | |||||||||    
T  38401 cacagattgca 38391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 23695 - 23578
Alignment:
Q  104 taatatcaatt-catttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcat 201  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||| | ||||||||||  ||| | ||| ||||||| ||| ||||| ||||||||||||    
T  23695 taatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatcacatcatattcaacattaacatttcat 23597  T
Q  202 aacagcttcgcagattgca 220  Q
    ||||||||| |||||||||    
T  23596 aacagcttcacagattgca 23578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 207
Target Start/End: Complemental strand, 207927 - 207764
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttc--aacaacatcttgatcatttaata 143  Q
    ||||||||||||||||||| | ||| |||||||| |||| | |||||| |||| ||||||||||||||||||||   ||||||| |||||||||| ||||    
T  207927 gcaacttagttaaataacaattgcagcataatcatatcatatcaacagtataacttcataatatcaattcattttcaaacaacaacttgatcattcaata 207828  T
Q  144 atatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  207827 atatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 207764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 1802 - 2004
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaa 125  Q
    |||||||||||||| |||| |||||||||||||||||||   ||| |||||||||| ||||||||||  |||| |||||||   ||||||||||||| ||    
T  1802 atcatcttgtatagcctcatgcaacttagttaaataacaaaggcagcataatcagaccacaacaacattataagttcataaccacaattcatttcaataa 1901  T
Q  126 catcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaa 225  Q
    |||| | |||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| || ||||    
T  1902 catcgttatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcatttaa 2000  T
Q  226 catc 229  Q
    ||||    
T  2001 catc 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 30863 - 30648
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| || ||||||| ||  |||||| ||||||| |||||||||||  |||| ||||||| |||||||||||||  ||| || ||||| | ||    
T  30863 tcaacatcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcggatcacaacaacattatactt-cataacaaca 30765  T
Q  112 attcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcg 211  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||  | |||| |||| |||      
T  30764 attcatttcaactacatctttatcattcaataatatttcaagtaatgcatttaatcattaaatcacattacaaacaacttagaagttca-aacaacttta 30666  T
Q  212 cagattgcagttaacatc 229  Q
    |||||| |||||||||||    
T  30665 cagatttcagttaacatc 30648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 4925 - 4711
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||||||||| | ||||| ||||  ||||||||||||||||| | | ||||||||||||    
T  4925 tcaacatcatcttaatcatcttatattgactcatgcaacttagttaaataataatagcagcataggcagatcacaacaacagcttgacttcataatatca 4826  T
Q  112 a-ttcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    | ||||||||||||||||||| |||||| |||||||| | |||||||  |  ||| | ||| ||||||| ||| ||||| |||||||||||| |||||||    
T  4825 atttcatttcaacaacatcttaatcattcaataatatcttaagtaatatacataa-cgttatatcacatcatattcaacattaacatttcat-acagctt 4728  T
Q  210 cgcagattgcagttaac 226  Q
    | |||||||||||||||    
T  4727 cacagattgcagttaac 4711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 35605 - 35414
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||||||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  35605 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaacattataatttcataacaacaattcattttcaacaacatcaaggttat 35506  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || ||||  |||||||||||| |||||||||||||||||||| || || ||||| | |||||||||||||| ||| |  |||||||||||    
T  35505 tcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaataattcataacagcttcacaggtctcagttaacatc 35414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 8583 - 8774
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  8583 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 8682  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || |||| ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||    
T  8683 tcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatc 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 33557 - 33695
Alignment:
Q  26 atcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataat-atcaattcatttcaaca 124  Q
    |||||||||||||||||||  || | ||||||||||||| || || || || ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  33557 atcatcttgtatagactcatccatcatagttaaataacaataacagcacaagcagatcacaacaacagcataacttcataattatcaattcatttcaaca 33656  T
Q  125 acatcttgatcatttaataatatttcaagtaatgcaatt 163  Q
    |||||||||| ||| |||||||| |||||||||||||||    
T  33657 acatcttgattattcaataatatctcaagtaatgcaatt 33695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 66502 - 66338
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  66502 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatca 66411  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  66410 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 66338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 53584 - 53748
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||| |||||||||    
T  53584 agactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaacttcttgatca 53675  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  53676 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttc 53748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 36415 - 36348
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  36415 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 36348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 36117 - 36041
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  36117 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 36041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 65919 - 65838
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||   ||||| ||||||| ||||||||||| ||||| ||||  ||||| ||||||||||    
T  65919 tcaacatcatcttgatcatcttttacctactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 65838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 34896 - 34813
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  34896 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacaattcataacagcttcacagattgcagttaacatc 34813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 35040 - 34960
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||| || |||||||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||    
T  35040 tcaacatcatcttaatcattttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 34960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 14207 - 13980
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcata-----a 106  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||| ||||| ||||| |||||||||||||||  || |  |||||     |    
T  14207 tcaacatcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaacattatgacatcatataaaga 14108  T
Q  107 tatcaattcatttcaa-caacatcttgatcatttaataat----atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    |||||| | |  |||| || || ||  |||||| | | ||    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14107 tatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaattcaattaatcattaaatcacattataatcaacttaacatttcat 14008  T
Q  202 aacagcttcgcagattgcagttaacatc 229  Q
    ||||||||| |||||| |||||||||||    
T  14007 aacagcttcacagatttcagttaacatc 13980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 7364 - 7174
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| | | ||||||| |||||||||||||    | ||    
T  7364 gactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaacattataatttcatcacaacaattcattttcaacaacatcaaagttat 7265  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    | || ||||  |||||||||||| |||||| ||||||||||||| || ||  ||||| |||||||||||| || |||||  |||||||||||    
T  7264 tcaagaataaatcaagtaatgcatttaatctttaaatcacattacaa-cagtttaacttttcataacagcctcacagatctcagttaacatc 7174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 2972 - 3055
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  2972 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacatttcataacagcttcacagattgcaattaacatc 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 6638 - 6721
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  6638 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacatttcataacagcttcacagattgcaattaacatc 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 2828 - 2907
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaac 91  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| || || ||||||||||||||    
T  2828 tcaacatcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 6494 - 6573
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaac 91  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| || || ||||||||||||||    
T  6494 tcaacatcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 6573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 30960 - 31063
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  30960 taataacaattcatttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 31059  T
Q  204 cagc 207  Q
    ||||    
T  31060 cagc 31063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 7061 - 6981
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  7061 tcaagtaatgcaattaatcattaaatctcattataatcagcttaacatttcataacagcttcacagattgcagttaacatc 6981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 7208 - 7128
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||||||||||||| || || ||||||||||||| ||||| || |  |||||||||||||||    
T  7208 tcaacatcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagcagcacaggcagatcacaacaaca 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 6756 - 6859
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  6756 taataacaattcatttcaacaacatcttgatcattctataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 6855  T
Q  204 cagc 207  Q
    ||||    
T  6856 cagc 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 12923 - 13085
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||| | ||||||||||||||| ||||||| ||||        |||||||||| ||||||||  |||||||||    
T  12923 agactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaatttcttgatca 13014  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 208  Q
    || ||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  13015 ttcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 13085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 19207 - 19369
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcat-ttcaacaacatcttgatca 136  Q
    ||||||| ||||||||||||| ||||| ||| | ||||||||||||||| ||||||| ||||        |||||||||| ||||||||  |||||||||    
T  19207 agactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaat--------atcaattcatcttcaacaatttcttgatca 19298  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 208  Q
    || ||||||| || |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  19299 ttcaataataattaaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 19369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 15331 - 15113
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| |||||||||||||||||||  |||| |||| ||||||||||||||||  |||| ||||||||| ||    
T  15331 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcatcatattcagatcacaacaacattataacttcataataaca 15232  T
Q  112 attca-tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
     |||| |||||||||||||  | | ||| || ||||   | ||||||||| |||||||||||||||||||| || |  |||| || ||||||||||||||    
T  15231 cttcattttcaacaacatcaaggttattcaagaataaacccagtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttc 15132  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||  |||||||||||    
T  15131 acagatctcagttaacatc 15113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 19853 - 19635
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  |||||| |||||||||||||||||||  |||| |||| ||||||||||||||||  |||| ||||||||| ||    
T  19853 tcaacaacatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaacattataacttcataataaca 19754  T
Q  112 attca-tttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
     |||| |||||||||||||  | | ||| || ||||   | ||||||||| |||||||||||||||||||| || |  |||| || ||||||||||||||    
T  19753 cttcattttcaacaacatcaaggttattcaagaataaacccagtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttc 19654  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||  |||||||||||    
T  19653 acagatctcagttaacatc 19635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 4320 - 4128
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaa-ttca-tttcaacaacatcttgatca 136  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||  ||||||  |||| | ||| |||| |||||||||| ||  | | |    
T  4320 gactcatgcaacttagttaaataacagcagcaacataatcagatcacaacagcattataattcgataacaacaatttcattttcaacaacttcaaggtta 4221  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
    || || ||||  |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||| ||| || ||  |||||||||||    
T  4220 ttcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagattcacatatctcagttaacatc 4128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 32570 - 32650
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacat 228  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  32570 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaacat 32650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 8527 - 8567
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  8527 gcaacttagttaaataacaattgcaacataatcaaatcaca 8567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 15671 - 15711
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  15671 gcaacttagttaaataacaattgcaacataatcaaatcaca 15711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 65613 - 65476
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| |||||||||||    
T  65613 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcttgatcatt 65522  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  65521 caataataattcaagtaatgcaatcaatcaataaatcacattataa 65476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 80462 - 80559
Alignment:
Q  110 caattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || |||||||  | |||||||||||    
T  80462 caattcattttaacaacatcttgatcattcaataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagtagttcataacagc 80559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 61697 - 61560
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  61697 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 61606  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  61605 caataataattcaagtaatgcaatcaatcaataaatcacattataa 61560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 80790 - 80914
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| ||||||||||||||| | || |||||||| ||||||| ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  |    
T  80790 taataacaattcatttcaacatcttcctgatcattcaataataattcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaata 80888  T
Q  204 cagcttcgcagattgcagttaacatc 229  Q
    ||||||| || ||  |||||||||||    
T  80889 cagcttcacaaataacagttaacatc 80914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 12761 - 12839
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||| |||||||||| |||||||||| ||||||||||| ||||||| || || ||||  |||||||||||||||    
T  12761 aacatcatcttaatcatcttatatagactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 12839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 192438 - 192220
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatca 111  Q
    |||||| |||| || ||||||| ||  ||||||  ||||||||||||||||||   ||| |||| ||| ||||||||||||  |||| ||||| ||| ||    
T  192438 tcaacaacatcttattcatcttataatgactcacacaacttagttaaataacaaaggcagcatattcaaatcacaacaacattataacttcattataaca 192339  T
Q  112 attcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    |||||||| ||||||||||  | | ||| || ||||  |||||||||||| |||||||||||||||||||| || || ||||| | ||||||||| ||||    
T  192338 attcattttcaacaacatcaaggtaattcaagaataaatcaagtaatgcatttaatcattaaatcacattacaaacagcttaaaaattcataacaacttc 192239  T
Q  211 gcagattgcagttaacatc 229  Q
     |||||  |||||||||||    
T  192238 acagatctcagttaacatc 192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 3960 - 3779
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| || ||||||||    
T  3960 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcctgatcatt 3869  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||| ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  3868 caataataattcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 3779  T

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Target: scaffold0149 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 3877 - 3954
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  3877 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaa 3954  T

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Target: scaffold0149; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 8308 - 8385
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  8308 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaa 8385  T

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Target: scaffold0293 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 20494 - 20391
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    ||||| |||||||||||| |||||||||||| ||| |||||||||||  |||||||| |||||||||||||||||||| || ||||||| || |||||||    
T  20494 taataacaattcatttcatcaacatcttgattattcaataatatttcgtgtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataa 20395  T
Q  204 cagc 207  Q
    ||||    
T  20394 cagc 20391  T

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Target: scaffold0109 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 36027 - 35891
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcattt 139  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||| | ||||||| ||||        ||||||| ||||||||||| || ||||||||     
T  36027 actcatgcaacttagttaaataacaatagcagcataattagatcatatcaacagcttaat--------atcaattaatttcaacaacttcctgatcattc 35936  T
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  35935 aataataattcaagtaatgcaatcaatcaataaatcacattataa 35891  T

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Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 36269 - 36202
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||    
T  36269 aataatatttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcacaacagc 36202  T

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Target: scaffold0228 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 18719 - 18555
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||||||||| | ||||||| ||||        | |||||||||| ||| ||  |||||||||    
T  18719 agactcatgcaacttaggtaaataacaatagcagcataatcagatcatatcaacagcttaat--------aacaattcattttcaataatttcttgatca 18628  T
Q  137 tttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    || || |||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  18627 ttcaaaaataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttc 18555  T

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Target: scaffold0410 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 2191 - 2325
Alignment:
Q  39 gactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattca-tttcaacaacatcttgatcat 137  Q
    |||||| |||||||||||||||||||| |||| |||||||| ||||||||| ||  |||||||||||| | ||||||| |||||||||||||  | | ||    
T  2191 gactcatgcaacttagttaaataacagcagcagcataatcaaatcacaacagcattataatttcataacaacaattcattttcaacaacatcaagtttat 2290  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaa 172  Q
    | || |||| ||||||||||||| |||||| ||||    
T  2291 tcaagaataattcaagtaatgcatttaatcgttaa 2325  T

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Target: scaffold0410; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 11457 - 11558
Alignment:
Q  95 ataatttcataatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaa 193  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||| || |||| ||||||||||||| |||||| ||||||||||||| || ||||||||    
T  11457 ataatttcataacaacaattcattttcaacaacatcaagtttattcaagaataattcaagtaatgcatttaatcgttaaatcacattacaaacaacttaa 11556  T
Q  194 ca 195  Q
    ||    
T  11557 ca 11558  T

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Target: scaffold0349 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 12451 - 12624
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||||| | ||||||| ||||        |||||||||||| ||||||| ||   ||||||||||||||    
T  12451 aacttagttaaataacaatagcagcataatcagatcatatcaacagcttaat--------atcaattcattttcaacaacttcccaatcatttaataata 12542  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatc 229  Q
     ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||    
T  12543 attcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatc 12624  T

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Target: scaffold0372 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 5186 - 5049
Alignment:
Q  40 actcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatt 138  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||| | ||||| | ||||        |||||||||||| ||||||| || ||||||||    
T  5186 actcatgcaacttagttaaataacaatagcagcataatcagctcatatcaacaacttaat--------atcaattcattttcaacaacttcctgatcatt 5095  T
Q  139 taataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  5094 caataataattcaagtaatgcaatcaatcaataaatcacattataa 5049  T

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Target: scaffold0297 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 15654 - 15575
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    ||||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  15654 ttcaagtaatgcaattaatcattatctcacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 15575  T

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Target: scaffold0297; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 10643 - 10580
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacata 75  Q
    ||||||||||| | |||||||| ||| |||||| ||||||| ||||||||||| ||||||||||    
T  10643 tcaacatcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcaacata 10580  T

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Target: scaffold0297; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 15800 - 15742
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagca 70  Q
    ||||||||||| | |||||||| ||| |||||| ||||||| ||||||||||| |||||    
T  15800 tcaacatcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagca 15742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 2759 - 2596
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcatttcaacaacatcttgatcat 137  Q
    ||||||| ||||||||||||| ||||| | ||| ||||||||||||||| ||||||| ||||        | ||||||||||||||||  ||||||||||    
T  2759 agactcatgcaacttagttaattaacaattgcagcataatcagatcacatcaacagcttaat--------aacaattcatttcaacaatttcttgatcat 2668  T
Q  138 ttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    | ||||| | |||||||||| |||| ||||| || |||||| ||||||| ||||| || ||||||| ||||||    
T  2667 tcaataacaattcaagtaatccaatcaatcaatatatcacaatataatc-acttagcagttcataaaagcttc 2596  T

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Target: scaffold1895 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 1258 - 1133
Alignment:
Q  102 cataatatcaatt-catttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttc 199  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||| | || |||||||  ||| ||||| ||||||| ||| ||||| |||| |||||    
T  1258 cataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaaataatgcacataa-cattatatcacatcatattcaacattaatatttc 1160  T
Q  200 ataacagcttcgcagattgcagttaac 226  Q
    ||||||||||| | |||||||||||||    
T  1159 ataacagcttcactgattgcagttaac 1133  T

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Target: scaffold0177 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 13501 - 13412
Alignment:
Q  118 ttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 208  Q
    ||||||||| ||||||||||| ||||||| || |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  13501 ttcaacaacttcttgatcattcaataataattaaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 13412  T

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Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 20047 - 19940
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagtaa-tgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||||| ||||||||| |||||| ||||| ||||||||||||||||| ||||||| ||||||    
T  20047 taataacaattcattttcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatcaataaatcacattataatc-acttaacgtttcat 19949  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  19948 aaaagcttc 19940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 20095 - 20051
Alignment:
Q  46 gcaacttagttaaataacagtagcaacataatcagatcacaacaa 90  Q
    ||||||||||| ||||||| | ||||||||||||||||||| |||    
T  20095 gcaacttagtttaataacaattgcaacataatcagatcacatcaa 20051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 184
Target Start/End: Complemental strand, 58796 - 58667
Alignment:
Q  48 aacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatcatttaataata 146  Q
    ||||||||||||||||| ||||| ||||||||||| | | ||||||| ||||        | |||||||||| ||||||| || |||||||| |||||||    
T  58796 aacttagttaaataacaatagcagcataatcagattatatcaacagcttaat--------accaattcattttcaacaacttcctgatcattcaataata 58705  T
Q  147 tttcaagtaatgcaattaatcattaaatcacattataa 184  Q
     ||||||||||||||| ||||| |||||||||||||||    
T  58704 attcaagtaatgcaatcaatcaataaatcacattataa 58667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 69905 - 70009
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| |||||||||||||||||||||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||    
T  69905 caacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 70004  T
Q  222 ttaac 226  Q
    |||||    
T  70005 ttaac 70009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 10588 - 10507
Alignment:
Q  128 tcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||  ||||||||| ||||||    
T  10588 tcttgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataatc-acttagtatttcataatagcttc 10507  T

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Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 69790 - 69871
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||  |||||| ||||||| ||||||||||| ||||| ||||  ||||| ||||||||||    
T  69790 tcaacatcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 69871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 14416 - 14349
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  14416 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 14118 - 14042
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  14118 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 14042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 189706 - 189639
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  189706 aataatatttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 189408 - 189332
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  189408 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 18437 - 18359
Alignment:
Q  149 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| |||||||    
T  18437 tcaagtaatgcaattattcgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagttaac 18359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Original strand, 472 - 548
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| ||||||||||||||   |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  472 taataacaattcatttcaac---atcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 174 - 239
Alignment:
Q  143 aatatttcaagtaatgcaattaatcattaaatcacatt-ataatcaacttaacatttcataacagc 207  Q
    |||||||| ||||||||| |||||||||||||| |||| | || ||||||| || |||||||||||    
T  174 aatatttcgagtaatgcatttaatcattaaatcgcattaaaaaacaacttagcagttcataacagc 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 11532 - 11456
Alignment:
Q  104 taatatcaattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    ||||| |||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  11532 taataacaattcatttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 11456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 11830 - 11763
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||| ||||| || ||||||| || |||||||||||    
T  11830 aataatatttcgagtaatgcatttaatcattaaatcgcattaaaaacaacttagcagttcataacagc 11763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 6091 - 6171
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||||||||||| ||||| ||||  |||||||||||||||    
T  6091 tcaacatcatcttaatcatcttatattgactcatgcaacttggttaaataacaatagcagcataggcagatcacaacaaca 6171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 6235 - 6316
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||| ||||||||||| ||| |  | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  6235 atttcaagaaatgcaattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 32675 - 32615
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattata 183  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  32675 caacatcttgatcattcaataatatttcaagtaatgcatttaatcattaattcacagtata 32615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 32989 - 32922
Alignment:
Q  140 aataatatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 207  Q
    ||||||||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  32989 aataatatttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 32922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 36567 - 36671
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||    
T  36567 caacatctcaatcattcattcatagttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 36666  T
Q  222 ttaac 226  Q
    |||||    
T  36667 ttaac 36671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 18374 - 18453
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||| | | |  |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  18374 ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaacatttcataacagcttcacagattgcagttaac 18453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 18232 - 18313
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacag 93  Q
    ||||||||||| | |||||||| ||| |||||| ||||| ||||||| ||||| ||||| ||||  |||||  |||||||||    
T  18232 tcaacatcatcttgatcatcttatatcgactcatgcaacatagttaattaacaatagcagcataggcagattgcaacaacag 18313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 6)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 14804 - 14885
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  14804 atttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 14885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 23819 - 23900
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  23819 atttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 23900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 39243 - 39324
Alignment:
Q  146 atttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  39243 atttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataacagcttcacagattgcagttaac 39324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 23675 - 23755
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| ||||||  |||||| ||||||||||| ||||| ||||  |||||||||||||||    
T  23675 tcaacatcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 23755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 39099 - 39179
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| ||||||  |||||| ||||||||||| ||||| ||||  |||||||||||||||    
T  39099 tcaacatcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 39179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 14662 - 14740
Alignment:
Q  14 aacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||| |||||||||| ||| ||||||  |||||| ||||||||||| ||||| ||||  |||||||||||||||    
T  14662 aacatcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 14740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 1877 - 1957
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||| ||||||| ||||||||||  ||||| |||||||||    
T  1877 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 21924 - 21844
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  21924 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 21844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 29816 - 29736
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| |||||||||| ||| |||||| ||||||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  29816 tcaacatcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 29736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 9670 - 9588
Alignment:
Q  128 tcttgatcatttaataatatttcaagtaa-tgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 210  Q
    ||||||||||| ||||||| ||||||||| ||| || ||||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  9670 tcttgatcattcaataataattcaagtaaatgcgatcaatcaataaatcacattataatc-acttaaaatttcataaaagcttc 9588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 1474 - 1553
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| | |||||||||||| |||||||| |||||    
T  1474 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctaataacagcttcgtagattgcatttaac 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 1335 - 1415
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| | |||||||| ||| |||||| |||||||  |||| ||||| ||||||||||  ||||| |||||||||    
T  1335 tcaacatcatcttgatcatcttatatcgactcatgcaacttgtttaagtaacaatagcaacataggcagattacaacaaca 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 20117 - 20196
Alignment:
Q  148 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaac 226  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||||||||| ||| |||||||||||    
T  20117 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacaggttgcagttaac 20196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 281011 - 280953
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagca 70  Q
    ||||||||||| ||||||||||||||||||||| || || ||||||||||||| |||||    
T  281011 tcaacatcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagca 280953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 1009 - 956
Alignment:
Q  131 tgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataa 184  Q
    |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  1009 tgatcattcaataataattcaagtaatgcaatcaatcaataaatcacattataa 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 5 - 112
Alignment:
Q  104 taatatcaattcatt-tcaacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| ||||||||| |||||||  ||||||||||| ||||||| ||||||| |||||||| ||||  ||| |||| ||||| || ||||||||||||||    
T  5 taataacaattcattctcaacaatttcttgatcattcaataataattcaagtaaatgcaatcaatccataattcactttatattc-acttaacatttcat 103  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  104 aaaagcttc 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 687 - 795
Alignment:
Q  120 caacaacatcttgatcatttaataatatttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagatt 217  Q
    |||||||||||  |||||| | | ||| |||||||| ||||||| |||||||||||| ||| ||| ||||| |||||||  | |||||||||| ||||||    
T  687 caacaacatctcaatcattcatttataattcaagtagtgcaatttaatcattaaatcgcatcatattcaacattaacatcacgtaacagcttcacagatt 786  T
Q  218 gcagttaac 226  Q
    |||||||||    
T  787 gcagttaac 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 7291 - 7371
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| ||||||||||  || |||||| ||||||| ||| ||||||| ||||||||||  ||||| |||||||||    
T  7291 tcaacatcatcttaatcatcttaaatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 7371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 174864 - 174980
Alignment:
Q  111 aattcatttcaacaacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagctt 209  Q
    |||||| |||||||||||||  |||||| | | ||| |||||||||||||| ||| ||||| ||||| | ||| |||||  |||||| |||||| |||||    
T  174864 aattcaattcaacaacatctcaatcattcattcataattcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataatagctt 174963  T
Q  210 cgcagattgcagttaac 226  Q
    | |||||| ||||||||    
T  174964 cacagatttcagttaac 174980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 228459 - 228303
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaattcattt-caacaacatcttgatca 136  Q
    ||||||| ||||||||||||||||||| | ||| ||||||||||||||| |||           | ||||| |||||||||| |||| |  |||||||||    
T  228459 agactcatgcaacttagttaaataacaattgcagcataatcagatcacatcaag----------cttaataacaattcattttcaactatttcttgatca 228370  T
Q  137 tttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcataa 203  Q
    || ||||||| ||||||| |||||||| ||||| ||||||||  ||||||| ||||| ||||||||||    
T  228369 ttcaataataattcaagtaaatgcaatcaatcaataaatcactatataatc-acttagcatttcataa 228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 26824 - 26904
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||  |||||||||| ||| |||||| ||| ||| ||||||||||| ||||| ||||  ||||| |||||||||    
T  26824 tcaacatcattttaatcatcttatatcgactcatgcatcttggttaaataacaatagcagcataggcagattacaacaaca 26904  T

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Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 23954 - 24057
Alignment:
Q  123 caacatcttgatcatttaataatatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcag 221  Q
    ||||||||  |||||| | | ||| ||||||||||| |||||| ||||| ||||||| ||| |||||  |||||| || |||||||||| ||||||||||    
T  23954 caacatctcaatcattcattcatagttcaagtaatgaaattaa-cattatatcacatcatattcaacactaacatctcttaacagcttcacagattgcag 24052  T
Q  222 ttaac 226  Q
    |||||    
T  24053 ttaac 24057  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 9084 - 9004
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| | |||||||| ||| |||||| ||||||| ||||||||| | ||||| ||||  ||||| |||||||||    
T  9084 tcaacatcatcttgatcatcttatatcgactcatgcaacttggttaaataataatagcagcataggcagattacaacaaca 9004  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 29102 - 29192
Alignment:
Q  24 taatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaacagcataatttcataatatcaatt 114  Q
    |||||||| |||||||||||| ||| ||||||||||||||| ||| | ||||   |||| ||||||| ||||| |  | ||||||||||||    
T  29102 taatcatcatgtatagactcatgcatcttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaatt 29192  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 5061 - 4984
Alignment:
Q  15 acatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    |||||||| || ||||||  ||| |||||| ||||||| |||||||||||  |||||||||   ||||||||||||||    
T  5061 acatcatcttattcatctcatattgactcatgcaacttggttaaataacaacagcaacatagggagatcacaacaaca 4984  T

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Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 4875 - 4843
Alignment:
Q  190 ttaacatttcataacagcttcgcagattgcagt 222  Q
    ||||||||||||||||||||| |||||||||||    
T  4875 ttaacatttcataacagcttcacagattgcagt 4843  T

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Target: scaffold0574 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 7938 - 7858
Alignment:
Q  12 tcaacatcatcctaatcatcttgtatagactcaagcaacttagttaaataacagtagcaacataatcagatcacaacaaca 92  Q
    ||||||||||| | |||||||  ||| |||||| ||||||| ||||||||||| ||||| | ||  ||||| |||||||||    
T  7938 tcaacatcatcttgatcatctcatatcgactcatgcaacttggttaaataacaatagcagcctaggcagattacaacaaca 7858  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 18446 - 18398
Alignment:
Q  38 agactcaagcaacttagttaaataacagtagcaacataatcagatcaca 86  Q
    ||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  18446 agactcatgcaacttagttaaataacaattgcagcataatcaaatcaca 18398  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 3560 - 3453
Alignment:
Q  104 taatatcaattcattt-caacaacatcttgatcatttaataatatttcaagt-aatgcaattaatcattaaatcacattataatcaacttaacatttcat 201  Q
    ||||| |||||||||| ||||||  ||||||||||| ||||| | ||||||| |||||||| ||||  ||| ||||  |||| || ||||||||||||||    
T  3560 taataacaattcattttcaacaatttcttgatcattcaataacaattcaagtaaatgcaatcaatccataattcactctatattc-acttaacatttcat 3462  T
Q  202 aacagcttc 210  Q
    || ||||||    
T  3461 aaaagcttc 3453  T

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