View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11755_low_31 (Length: 250)
Name: NF11755_low_31
Description: NF11755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11755_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 43206825 - 43206594
Alignment:
| Q |
1 |
acaacaccgttccatcactgttccatgccaacgcattaacggctggtttctgcttccccaccatacacaccaacgtgtagcgtttcacctgatcatccat |
100 |
Q |
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| T |
43206825 |
acaacaccgttccatcactgttcaatgccaacgcattaacggctggtttctgcttccccaccatactcaccaacgtgtagcgtttcacctgatcatccat |
43206726 |
T |
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| Q |
101 |
catcttccaaaccttgatgcacccatcagctgatgcagtataaacaacaccgtcatcagaaacaacaacagcgttaatagcgtcttcatgagcgttaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43206725 |
catcttccaaaccttgatgcacccatcagctgatgcagtataaacaacaccgtcatcagaaacaacaacagcgttaatagcgtcttcatgagcgttaaaa |
43206626 |
T |
|
| Q |
201 |
gactccaaacaccagttattacctgaagacaa |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
43206625 |
gactccaaacaccagttattacctgaagacaa |
43206594 |
T |
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