View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11758_high_42 (Length: 241)
Name: NF11758_high_42
Description: NF11758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11758_high_42 |
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Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9924654 - 9924872
Alignment:
| Q |
1 |
ttatgaccaaaattaaaatttgtggaagaaacaaagtttacaaaaagagttacctttgcataataatatgcttgattgcaaatgcagttcacaaccacca |
100 |
Q |
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| T |
9924654 |
ttatgaccaaaattaaaatttgtggaagaaacaaagtttaaaaaaagagttacctttgcataataatatgcttgattgcaaatgcagttcacaaccacca |
9924753 |
T |
|
| Q |
101 |
ttagagatttaccaaattgtccataatttcccctcttgatagactaaaacaaaaatgcattcaagacacataagcaaattgaaaatctatatcaaataat |
200 |
Q |
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| T |
9924754 |
ttagagatttaccaaattgtccataatttcccctcttgatagactaaaacaaaaatgcattcaagatacataagcaaatttaaaatctatatcaaataat |
9924853 |
T |
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| Q |
201 |
gaaaatagattcaatgaggc |
220 |
Q |
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| T |
9924854 |
g-aaatagattcaatgaggc |
9924872 |
T |
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