View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11758_low_16 (Length: 538)

Name: NF11758_low_16
Description: NF11758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11758_low_16
NF11758_low_16
[»] chr4 (57 HSPs)
chr4 (10-522)||(50514478-50514979)
chr4 (125-315)||(35808374-35808565)
chr4 (125-290)||(55669704-55669870)
chr4 (152-284)||(45688714-45688847)
chr4 (152-314)||(33951638-33951804)
chr4 (125-314)||(26040338-26040521)
chr4 (125-290)||(23765543-23765709)
chr4 (125-254)||(34016626-34016756)
chr4 (125-290)||(41956191-41956357)
chr4 (138-280)||(10100104-10100247)
chr4 (168-280)||(19328950-19329062)
chr4 (137-284)||(51266895-51267043)
chr4 (125-284)||(2362600-2362762)
chr4 (125-279)||(31754914-31755069)
chr4 (137-263)||(32131134-32131261)
chr4 (178-284)||(47188697-47188803)
chr4 (137-280)||(34316712-34316857)
chr4 (127-290)||(30475390-30475554)
chr4 (157-279)||(20811239-20811362)
chr4 (125-283)||(27839284-27839443)
chr4 (125-282)||(26831764-26831921)
chr4 (125-282)||(31168107-31168265)
chr4 (167-280)||(53566971-53567087)
chr4 (122-290)||(54339078-54339246)
chr4 (149-280)||(40436056-40436188)
chr4 (178-283)||(45088042-45088144)
chr4 (187-275)||(32584560-32584648)
chr4 (125-212)||(51290473-51290561)
chr4 (184-275)||(52341581-52341672)
chr4 (167-275)||(35675211-35675319)
chr4 (203-281)||(9693528-9693606)
chr4 (151-220)||(19876187-19876257)
chr4 (183-284)||(15986237-15986338)
chr4 (183-284)||(20456540-20456641)
chr4 (151-274)||(30617930-30618054)
chr4 (195-274)||(1457584-1457663)
chr4 (171-237)||(3769831-3769897)
chr4 (181-251)||(35927309-35927379)
chr4 (167-284)||(31494682-31494799)
chr4 (167-284)||(51018400-51018517)
chr4 (167-230)||(35511201-35511264)
chr4 (137-222)||(31487754-31487840)
chr4 (167-274)||(30199807-30199914)
chr4 (181-240)||(52021047-52021106)
chr4 (181-275)||(966562-966656)
chr4 (166-240)||(13966574-13966648)
chr4 (183-316)||(36486723-36486856)
chr4 (183-240)||(39418155-39418212)
chr4 (183-275)||(39158363-39158455)
chr4 (183-239)||(46823488-46823544)
chr4 (183-230)||(49483122-49483169)
chr4 (183-225)||(11996140-11996182)
chr4 (167-253)||(13498138-13498224)
chr4 (167-240)||(27545877-27545950)
chr4 (167-231)||(23260728-23260793)
chr4 (195-240)||(25928454-25928499)
chr4 (183-236)||(53484634-53484687)
[»] chr3 (40 HSPs)
chr3 (125-282)||(32415542-32415700)
chr3 (125-286)||(36730131-36730293)
chr3 (135-282)||(8847440-8847588)
chr3 (118-280)||(46317461-46317624)
chr3 (125-279)||(8715480-8715634)
chr3 (125-279)||(9067367-9067521)
chr3 (137-284)||(35306303-35306451)
chr3 (125-283)||(44570364-44570523)
chr3 (151-289)||(51817316-51817455)
chr3 (125-282)||(25102300-25102457)
chr3 (151-274)||(4759854-4759978)
chr3 (134-280)||(10854834-10854985)
chr3 (116-280)||(37509086-37509251)
chr3 (125-280)||(29915553-29915709)
chr3 (125-280)||(29964706-29964862)
chr3 (125-271)||(44695649-44695796)
chr3 (167-289)||(12051004-12051126)
chr3 (171-280)||(20227405-20227514)
chr3 (156-279)||(12905292-12905415)
chr3 (167-280)||(52570755-52570870)
chr3 (197-281)||(31647278-31647362)
chr3 (158-275)||(21324496-21324612)
chr3 (125-224)||(1803919-1804019)
chr3 (183-275)||(34060803-34060895)
chr3 (151-240)||(18791-18881)
chr3 (183-253)||(41345977-41346047)
chr3 (167-240)||(18949-19022)
chr3 (151-274)||(45899547-45899672)
chr3 (184-251)||(11316970-11317037)
chr3 (187-231)||(26850535-26850579)
chr3 (182-240)||(34750293-34750351)
chr3 (125-214)||(48136701-48136790)
chr3 (167-275)||(11675293-11675399)
chr3 (167-240)||(39974827-39974900)
chr3 (195-240)||(50420699-50420744)
chr3 (192-267)||(46160500-46160575)
chr3 (190-237)||(49976185-49976232)
chr3 (182-268)||(271202-271288)
chr3 (184-226)||(6822837-6822879)
chr3 (183-240)||(12060096-12060153)
[»] chr1 (53 HSPs)
chr1 (125-290)||(27209696-27209862)
chr1 (125-277)||(34874545-34874698)
chr1 (137-283)||(11385953-11386100)
chr1 (125-283)||(41147453-41147612)
chr1 (151-284)||(4940741-4940875)
chr1 (125-290)||(7190450-7190616)
chr1 (125-286)||(22346212-22346374)
chr1 (137-280)||(49508721-49508864)
chr1 (152-277)||(28277484-28277610)
chr1 (125-286)||(43433744-43433906)
chr1 (125-273)||(47655346-47655495)
chr1 (167-284)||(50154444-50154561)
chr1 (152-275)||(49901906-49902030)
chr1 (167-282)||(6170569-6170684)
chr1 (134-279)||(932141-932287)
chr1 (125-280)||(2125682-2125838)
chr1 (125-284)||(24140744-24140903)
chr1 (152-274)||(33929947-33930070)
chr1 (137-285)||(11385797-11385946)
chr1 (152-263)||(42607326-42607438)
chr1 (178-281)||(47895308-47895411)
chr1 (125-282)||(31975460-31975618)
chr1 (151-284)||(52396414-52396547)
chr1 (123-251)||(4656020-4656149)
chr1 (128-253)||(40845253-40845379)
chr1 (125-264)||(28850885-28851024)
chr1 (137-248)||(32213876-32213988)
chr1 (151-282)||(45721728-45721857)
chr1 (151-277)||(29966800-29966928)
chr1 (151-264)||(50295434-50295549)
chr1 (137-284)||(8244068-8244207)
chr1 (125-263)||(26469557-26469696)
chr1 (168-240)||(41898878-41898950)
chr1 (188-275)||(17402928-17403015)
chr1 (167-280)||(48938611-48938723)
chr1 (167-275)||(51424137-51424245)
chr1 (167-290)||(14331802-14331925)
chr1 (167-290)||(44359690-44359813)
chr1 (149-275)||(40920165-40920294)
chr1 (197-263)||(44286864-44286930)
chr1 (151-240)||(41492924-41493013)
chr1 (167-290)||(43168106-43168229)
chr1 (198-262)||(30222613-30222678)
chr1 (188-274)||(27210705-27210792)
chr1 (167-225)||(5945450-5945508)
chr1 (167-240)||(16691309-16691382)
chr1 (167-279)||(8892789-8892901)
chr1 (234-278)||(9055897-9055941)
chr1 (192-230)||(44043500-44043538)
chr1 (207-252)||(10161024-10161069)
chr1 (195-240)||(46296231-46296276)
chr1 (184-240)||(23328437-23328493)
chr1 (195-275)||(34644145-34644225)
[»] chr7 (55 HSPs)
chr7 (125-284)||(29034658-29034818)
chr7 (152-277)||(24359713-24359839)
chr7 (123-280)||(5240308-5240466)
chr7 (149-286)||(42222190-42222328)
chr7 (125-263)||(40763241-40763380)
chr7 (125-285)||(46478537-46478694)
chr7 (152-285)||(8380411-8380545)
chr7 (125-314)||(27053471-27053662)
chr7 (125-288)||(7322931-7323095)
chr7 (125-284)||(1910215-1910374)
chr7 (125-286)||(8292714-8292876)
chr7 (137-263)||(43567496-43567623)
chr7 (151-280)||(22521561-22521691)
chr7 (184-274)||(29687457-29687547)
chr7 (151-279)||(49069531-49069660)
chr7 (151-286)||(41188790-41188926)
chr7 (153-250)||(3681699-3681797)
chr7 (125-283)||(36279094-36279250)
chr7 (125-274)||(5347950-5348097)
chr7 (125-265)||(30538458-30538596)
chr7 (125-255)||(22707049-22707179)
chr7 (137-231)||(48454812-48454907)
chr7 (151-263)||(43958087-43958200)
chr7 (197-263)||(40194818-40194884)
chr7 (138-264)||(8258634-8258756)
chr7 (167-254)||(46042749-46042835)
chr7 (151-276)||(40066921-40067045)
chr7 (190-275)||(44296945-44297030)
chr7 (188-252)||(31626083-31626147)
chr7 (189-275)||(18529196-18529282)
chr7 (187-284)||(16082473-16082570)
chr7 (167-240)||(32204197-32204270)
chr7 (202-291)||(35404310-35404399)
chr7 (183-280)||(48879645-48879742)
chr7 (227-287)||(29959035-29959095)
chr7 (209-282)||(16957639-16957711)
chr7 (183-279)||(16931867-16931962)
chr7 (183-279)||(16937250-16937345)
chr7 (183-279)||(30388697-30388793)
chr7 (168-240)||(40774264-40774336)
chr7 (183-230)||(4686080-4686127)
chr7 (188-275)||(35239829-35239915)
chr7 (182-252)||(6548533-6548603)
chr7 (189-283)||(10575802-10575896)
chr7 (167-217)||(31360313-31360363)
chr7 (202-275)||(44260558-44260631)
chr7 (144-275)||(1907586-1907717)
chr7 (167-230)||(3720135-3720198)
chr7 (189-240)||(5543061-5543112)
chr7 (187-230)||(35003630-35003673)
chr7 (197-240)||(43189688-43189731)
chr7 (168-231)||(44391019-44391082)
chr7 (195-240)||(18800197-18800242)
chr7 (188-225)||(46423388-46423425)
chr7 (188-240)||(5977757-5977809)
[»] chr5 (48 HSPs)
chr5 (128-290)||(35653236-35653399)
chr5 (152-290)||(34546743-34546882)
chr5 (123-287)||(4421940-4422105)
chr5 (125-290)||(16315512-16315676)
chr5 (125-279)||(35945222-35945377)
chr5 (137-285)||(4962507-4962655)
chr5 (125-264)||(43414042-43414182)
chr5 (139-281)||(25017283-25017426)
chr5 (151-276)||(5151468-5151594)
chr5 (124-276)||(28143100-28143253)
chr5 (168-283)||(13951258-13951373)
chr5 (124-290)||(39567868-39568035)
chr5 (169-290)||(12914140-12914261)
chr5 (117-282)||(8410115-8410281)
chr5 (144-279)||(3639072-3639207)
chr5 (159-282)||(25568304-25568428)
chr5 (125-250)||(37243852-37243977)
chr5 (151-284)||(27823233-27823364)
chr5 (178-281)||(39692984-39693087)
chr5 (137-263)||(338754-338881)
chr5 (151-251)||(1759821-1759922)
chr5 (167-280)||(12068195-12068307)
chr5 (151-242)||(1479140-1479232)
chr5 (167-312)||(39167538-39167683)
chr5 (128-216)||(15915871-15915960)
chr5 (214-277)||(4838259-4838322)
chr5 (168-275)||(20184570-20184677)
chr5 (137-235)||(40099352-40099450)
chr5 (188-274)||(39335454-39335540)
chr5 (124-254)||(10017599-10017727)
chr5 (169-271)||(10406772-10406873)
chr5 (183-275)||(678430-678522)
chr5 (167-275)||(19894798-19894906)
chr5 (167-240)||(38610313-38610386)
chr5 (208-279)||(15915014-15915083)
chr5 (207-281)||(39042096-39042170)
chr5 (167-251)||(6823773-6823858)
chr5 (187-230)||(12349585-12349628)
chr5 (189-240)||(24288502-24288553)
chr5 (189-240)||(24373668-24373719)
chr5 (183-230)||(28599691-28599738)
chr5 (202-240)||(3015106-3015144)
chr5 (167-240)||(3241974-3242047)
chr5 (209-254)||(16899635-16899680)
chr5 (183-235)||(27535114-27535167)
chr5 (188-228)||(5058772-5058812)
chr5 (168-240)||(17168691-17168763)
chr5 (183-239)||(28996229-28996285)
[»] chr2 (45 HSPs)
chr2 (149-284)||(2966511-2966647)
chr2 (125-284)||(6999173-6999333)
chr2 (128-313)||(39085773-39085952)
chr2 (138-284)||(16361537-16361684)
chr2 (125-283)||(39401513-39401671)
chr2 (125-254)||(765128-765258)
chr2 (138-285)||(862559-862707)
chr2 (125-288)||(27495090-27495254)
chr2 (150-315)||(17118376-17118542)
chr2 (125-285)||(17074466-17074626)
chr2 (152-285)||(41436448-41436582)
chr2 (125-285)||(17056036-17056196)
chr2 (125-285)||(17068483-17068643)
chr2 (183-282)||(23685689-23685788)
chr2 (138-280)||(33726355-33726498)
chr2 (134-255)||(17603811-17603933)
chr2 (137-261)||(33864349-33864474)
chr2 (188-284)||(17095108-17095204)
chr2 (125-290)||(1321132-1321299)
chr2 (136-290)||(9201484-9201638)
chr2 (206-281)||(11445379-11445454)
chr2 (125-280)||(44299659-44299815)
chr2 (151-278)||(35445294-35445423)
chr2 (167-280)||(464770-464884)
chr2 (167-276)||(44173099-44173207)
chr2 (197-277)||(15004905-15004985)
chr2 (149-275)||(2239562-2239689)
chr2 (123-255)||(13997880-13998013)
chr2 (167-275)||(34334182-34334290)
chr2 (183-284)||(11659233-11659334)
chr2 (140-240)||(34220639-34220740)
chr2 (183-240)||(747528-747585)
chr2 (207-284)||(33848957-33849034)
chr2 (217-290)||(41890182-41890255)
chr2 (167-290)||(2136401-2136524)
chr2 (185-275)||(29260167-29260257)
chr2 (191-240)||(3454743-3454791)
chr2 (167-240)||(10900271-10900344)
chr2 (138-242)||(43140314-43140419)
chr2 (168-219)||(11445313-11445364)
chr2 (187-230)||(34512671-34512714)
chr2 (197-231)||(8327004-8327038)
chr2 (167-237)||(30831636-30831706)
chr2 (197-263)||(2805373-2805441)
chr2 (169-222)||(37230253-37230306)
[»] chr8 (35 HSPs)
chr8 (125-277)||(19389288-19389441)
chr8 (125-282)||(4989909-4990064)
chr8 (152-281)||(10694781-10694911)
chr8 (156-265)||(18068952-18069062)
chr8 (151-282)||(8018733-8018866)
chr8 (152-290)||(26672755-26672894)
chr8 (125-274)||(21016035-21016185)
chr8 (123-276)||(45337983-45338137)
chr8 (157-275)||(14855394-14855513)
chr8 (157-263)||(26195383-26195490)
chr8 (151-255)||(25249345-25249450)
chr8 (167-290)||(6433509-6433632)
chr8 (167-261)||(6939152-6939246)
chr8 (128-255)||(21016234-21016362)
chr8 (152-282)||(37433239-37433369)
chr8 (197-311)||(33741525-33741637)
chr8 (151-280)||(44874308-44874430)
chr8 (178-273)||(34713953-34714048)
chr8 (125-235)||(5129434-5129545)
chr8 (167-246)||(26892795-26892874)
chr8 (153-275)||(3174436-3174563)
chr8 (151-275)||(7532767-7532890)
chr8 (190-275)||(20212433-20212518)
chr8 (181-263)||(30351583-30351666)
chr8 (183-284)||(39972189-39972290)
chr8 (188-275)||(4308789-4308876)
chr8 (216-275)||(7444258-7444317)
chr8 (167-290)||(38869969-38870092)
chr8 (188-251)||(6396315-6396378)
chr8 (168-231)||(20169309-20169372)
chr8 (197-275)||(35973927-35974005)
chr8 (192-237)||(17320000-17320045)
chr8 (197-230)||(39491858-39491891)
chr8 (215-275)||(5300203-5300263)
chr8 (187-275)||(25381708-25381796)
[»] scaffold0062 (3 HSPs)
scaffold0062 (125-283)||(16750-16908)
scaffold0062 (125-283)||(26918-27076)
scaffold0062 (125-283)||(37084-37242)
[»] chr6 (24 HSPs)
chr6 (124-281)||(7274191-7274349)
chr6 (126-316)||(10855379-10855562)
chr6 (167-283)||(7875202-7875318)
chr6 (151-282)||(12191466-12191598)
chr6 (138-284)||(5578245-5578392)
chr6 (125-290)||(26572060-26572221)
chr6 (167-283)||(7880448-7880564)
chr6 (124-290)||(16437567-16437726)
chr6 (151-255)||(6866915-6867020)
chr6 (167-290)||(8324125-8324248)
chr6 (188-274)||(31220369-31220455)
chr6 (214-283)||(32786041-32786110)
chr6 (125-232)||(29692319-29692427)
chr6 (188-274)||(21186059-21186145)
chr6 (167-280)||(12175535-12175647)
chr6 (125-212)||(32786259-32786346)
chr6 (191-280)||(34780023-34780112)
chr6 (151-252)||(28014638-28014740)
chr6 (184-236)||(1947424-1947476)
chr6 (167-290)||(12226352-12226475)
chr6 (257-318)||(19645941-19645995)
chr6 (207-282)||(29964274-29964349)
chr6 (183-240)||(5029489-5029546)
chr6 (167-240)||(27127528-27127601)
[»] scaffold0002 (1 HSPs)
scaffold0002 (178-275)||(392164-392261)
[»] scaffold0809 (2 HSPs)
scaffold0809 (205-264)||(4705-4764)
scaffold0809 (126-213)||(4249-4337)
[»] scaffold0144 (1 HSPs)
scaffold0144 (167-291)||(39553-39675)
[»] scaffold0050 (1 HSPs)
scaffold0050 (197-275)||(37430-37507)
[»] scaffold2122 (1 HSPs)
scaffold2122 (183-239)||(655-711)


Alignment Details
Target: chr4 (Bit Score: 381; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 10 - 522
Target Start/End: Original strand, 50514478 - 50514979
Alignment:
Q  10 gcagaacctgtgtcttatagcaggtaagaatgttatttctcttaatatataattgtattcatgtgataaatgtaattggttactcatctagttcatttgt 109  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50514478 gcagaaactatgtcttatagcaggtaagaatgttatttctcttaatatataattgtattcatgtgataaatgtaattggttactcatctagttcatttgt 50514577  T
Q  110 tctacttaaaagatagagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaat 209  Q
    ||||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  50514578 tctacttaaaa-atagagaatgctaaccattgctcttgtgacattggataagaggataaaatagaaatataacattgaaaaatggtaaaaagtgataaat 50514676  T
Q  210 ttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaa 309  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | || |||       |||||||||||||    
T  50514677 ttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgacatcgggg-------caatggttagcaa 50514769  T
Q  310 gacccaaaagataaatatcgtagactaatttgtactccatgtgccacccattgtttgggatttatcgttagaggatattggaaaattgcctaccgttaat 409  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  50514770 gacccaaaagataaatatcgtagactattttgtactccatgtaccacccattgtttgggatttatcgttagaggatattggaaaattacccaccgttaat 50514869  T
Q  410 aggacaacaaaaacgcaatatatttttgggttcatctacaactataccatggcccttaacacgatgagatcacatactggagaagaagctgaattgatta 509  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||   |||||||||||||||||    
T  50514870 aggacaacaaaaacgcaatatatttttgggttcatctacaaccataccatggcccttaacacaatgagatcacatacggg---agaagctgaattgatta 50514966  T
Q  510 gaagtggggttac 522  Q
    |||||||||||||    
T  50514967 gaagtggggttac 50514979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 125 - 315
Target Start/End: Original strand, 35808374 - 35808565
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||| || |||| ||||||||||||||||||||||    
T  35808374 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaatttaactttttaaaa 35808473  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaagaccca 315  Q
    || |||||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||| |   |||| | |||||||||||||||||||    
T  35808474 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgtcctgactcctgatggcaatggttagcaagaccca 35808565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 125 - 290
Target Start/End: Complemental strand, 55669870 - 55669704
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  55669870 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttttaaaa 55669771  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    || ||||||||||| |||  |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  55669770 gtcaaaatgttgttaaaaacaatgcaaacatgctacttttggcttccttaaccattgccctcagggc 55669704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 45688847 - 45688714
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| |||||| ||||||||| |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45688847 attggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaa 45688748  T
Q  251 acatgttacttttggtttccttaaccattgccct 284  Q
    ||||| ||||||||| ||||||||| ||||||||    
T  45688747 acatgctacttttggcttccttaactattgccct 45688714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 152 - 314
Target Start/End: Complemental strand, 33951804 - 33951638
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    |||| |||||||||||||| |||||| |||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||    
T  33951804 attgaataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaa 33951705  T
Q  251 acatgttacttttggtttccttaaccattgccctcagggc---tgaggacaatggttagcaagaccc 314  Q
    |||||||| |||||| |||||||||||||||||| |||||   || |||||||||||||||| ||||    
T  33951704 acatgttaattttggcttccttaaccattgccctgagggcaattgtggacaatggttagcaaaaccc 33951638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 125 - 314
Target Start/End: Original strand, 26040338 - 26040521
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| | |||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  26040338 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaa 26040437  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaagaccc 314  Q
    || ||||| |||||||| | |||||||| ||| ||||||||| ||||||||||| |||        |||||||||||||||||||||||||    
T  26040438 gtcaaaatattgttgaagccaatgcaaatatgctacttttggcttccttaaccactgc-------tctgaggacaatggttagcaagaccc 26040521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 290
Target Start/End: Complemental strand, 23765709 - 23765543
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||| |||   |||| ||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23765709 gagaatgctaaccattgcctttggtgcattagataaggggataaaaattgaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 23765610  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
     | |||||||||||||||| |||||||||||| ||||||| | ||||||||| |||| ||| |||||    
T  23765609 atcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaacaattgtcctgagggc 23765543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 34016756 - 34016626
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  34016756 gagaatgctaaccattgtccttgagacattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaatttaactttttaaaa 34016657  T
Q  224 gttaaaatgttgttgaaactaatgcaaacat 254  Q
    || |||||||||||||||  |||||||||||    
T  34016656 gtcaaaatgttgttgaaatcaatgcaaacat 34016626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 41956191 - 41956357
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | ||| ||||||| |||||||| |||||| ||| |||||||||||| | |||| ||||||||||||||||||||||    
T  41956191 gagaatgctaaccattgcccttggggcatcggataagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaa 41956290  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    || |||||||||||||| | |||||||||||| ||||||||  ||||||||||||||| || |||||    
T  41956291 gtcaaaatgttgttgaagccaatgcaaacatgctacttttgccttccttaaccattgctctgagggc 41956357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 10100104 - 10100247
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||| ||||| ||||| |||||||||||||||| || ||| |||  ||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  10100104 attgtccttgggacatcggataaggggataaaaatataaatataatattagaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgt 10100203  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    |||||| |||||||||||||||||||||| || |||||||||||    
T  10100204 tgaaaccaatgcaaacatgttacttttggctttcttaaccattg 10100247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 19328950 - 19329062
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtt 267  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||||  |    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgcct 19329049  T
Q  268 tccttaaccattg 280  Q
    |||||||||||||    
T  19329050 tccttaaccattg 19329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 137 - 284
Target Start/End: Complemental strand, 51267043 - 51266895
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    |||||| ||||  ||||||||||||| ||||||| |||||| |||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||    
T  51267043 cattgctcttggaacattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 51266944  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    ||||||  ||| |||||||| ||||||||  |||||||| |||||||||    
T  51266943 ttgaaatcaatacaaacatgctacttttgacttccttaatcattgccct 51266895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 2362762 - 2362600
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttt--aa 221  Q
    |||||||| || ||||||||||| | ||| |||||||||||||||| || ||| |||| ||||||||||||| ||||||||||||||||| |||||  ||    
T  2362762 gagaatgctaaccattgcccttggggcatcggataaggggataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaa 2362663  T
Q  222 aagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    |||| ||||||||||| |||| |||||||||||  ||||||||  ||||||||||||||||||    
T  2362662 aagtcaaaatgttgttaaaaccaatgcaaacatactacttttgacttccttaaccattgccct 2362600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 125 - 279
Target Start/End: Complemental strand, 31755069 - 31754914
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||| ||| |  ||||||||||||||||||| || ||| |||| |||| |||||| | |||||||||||||||||||||||||||    
T  31755069 gagaatgctaaccattgccattggggtattggataaggggataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaa 31754970  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    || ||||| |||||||||| |||||||||||| ||||||||  |||||||||||||    
T  31754969 gtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaaccatt 31754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 137 - 263
Target Start/End: Complemental strand, 32131261 - 32131134
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    |||||||||||  ||||||||||| | ||||||| |||||| |||| ||||||||||||| | ||||||||||||||||||||||||||| || ||||||    
T  32131261 cattgcccttggaacattggataaagagataaaaatagaaatatagtattggaaaatggtgataagtgataaatttaactttttaaaagtcaagatgttg 32131162  T
Q  236 ttgaaactaatgcaaacatgttactttt 263  Q
    ||||||| ||||||||||||||||||||    
T  32131161 ttgaaaccaatgcaaacatgttactttt 32131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 47188697 - 47188803
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    |||| ||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  47188697 atagtattggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacca 47188796  T
Q  278 ttgccct 284  Q
    |||||||    
T  47188797 ttgccct 47188803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 34316712 - 34316857
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaa-tttaactttttaaaagttaaaatgtt 234  Q
    ||||||||||| | |||||||||||| ||||||| || ||| ||| ||||| ||||| || |||||||||||| ||||||||||||||||| ||||| ||    
T  34316712 cattgcccttggggcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatatt 34316811  T
Q  235 gttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  34316812 gttgaaaccaatgcaaacatgctacttttggcttccttaaccattg 34316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 30475554 - 30475390
Alignment:
Q  127 gaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagt 225  Q
    |||||| || ||||||||||  |  ||||||||||| ||||||| || ||| |||| |||| |||||||| |||||||||||||||||||||||||| ||    
T  30475554 gaatgctaaccattgcccttagggtattggataaggagataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgt 30475455  T
Q  226 taaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
     ||||| |||||||||| ||||||||||| |||||||||| ||||||||| ||||| || |||||    
T  30475454 caaaatattgttgaaaccaatgcaaacatattacttttggcttccttaactattgctctgagggc 30475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 20811362 - 20811239
Alignment:
Q  157 ataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatg 255  Q
    |||||||||||||| |||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||    
T  20811362 ataaggggataaaaatagaaatataacattggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaatcaatgcaaacatg 20811263  T
Q  256 ttacttttggtttccttaaccatt 279  Q
     ||||||||| ||| |||||||||    
T  20811262 ctacttttggcttctttaaccatt 20811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 27839284 - 27839443
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | ||||||||||||| |||||| |||||| ||||||||| |||||| | |||| |||||||||||| |||||||||    
T  27839284 gagaatgctaaccattgcccttggggcattggataagggaataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaagtttttaaaa 27839383  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || |||||||| || |||| |||||||||||| || |||||   ||||||| ||||||||    
T  27839384 gtcaaaatgttattaaaaccaatgcaaacatgctatttttgacctccttaatcattgccc 27839443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 26831764 - 26831921
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||  |||| ||||| | ||||| ||||| |||||||| |||||| |||  |||| ||||||||||||||||||||||||| ||||||||||    
T  26831764 gagaatgctaacaattgtccttggggcattgaataagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaatttatctttttaaaa 26831863  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
     |||||||||||||||||| |||||||||||| ||||||||  ||| ||||| ||||||    
T  26831864 attaaaatgttgttgaaac-aatgcaaacatgctacttttgacttctttaacgattgcc 26831921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 31168265 - 31168107
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||  ||||||||||   |||| || |||||||||||| |||||   ||||||||||||||||| ||||||||||||||||| ||||| |||    
T  31168265 gagaatgctaactattgcccttggagcattagacaaggggataaaaatagaattttagcattggaaaatggtgaaaagtgataaatttaatttttttaaa 31168166  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    || |||||||||||||||| |||| ||||||  ||||||||| ||| ||||||||||||    
T  31168165 gtcaaaatgttgttgaaaccaatgtaaacattctacttttggcttctttaaccattgcc 31168107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 53566971 - 53567087
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtg---ataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    |||||||||| ||||||||| ||||| |||||||||    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  53566971 aaaatagaaatatagcattgaaaaatagtaaaaagtactaataaatttaactttttaaaagttaaaatgttgttgaaactcatgcaaacatgctactttt 53567070  T
Q  264 ggtttccttaaccattg 280  Q
    |  ||||||||| ||||    
T  53567071 gacttccttaactattg 53567087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 290
Target Start/End: Complemental strand, 54339246 - 54339078
Alignment:
Q  122 atagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttta 220  Q
    ||||||||||| || ||||| | ||| | |||||||||| ||||||||| || ||| ||| ||||| |||||||| |||| |||||||||||| ||||||    
T  54339246 atagagaatgctaaccattgtcgttggggcattggataaagggataaaaatataaatataacattgaaaaatggtgaaaa-tgataaatttaatttttta 54339148  T
Q  221 aaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||||| ||||| || ||||||| |||| ||| ||| ||||||||  ||||||||||||||| || |||||    
T  54339147 aaagtcaaaatatttttgaaaccaatgtaaatatgctacttttgacttccttaaccattgctctgagggc 54339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 40436188 - 40436056
Alignment:
Q  149 gacattggataaggggataaaatagaaaga-tagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatg 247  Q
    ||||||||||||||||||||||  |||| | |||||||  |||||| | |||| | |||||||||||||||||||  | ||||| |||||||||| || |    
T  40436188 gacattggataaggggataaaaatgaaaaaatagcattaaaaaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaaaccaaag 40436089  T
Q  248 caaacatgttacttttggtttccttaaccattg 280  Q
    |||||||| |||||||||||| |||||||||||    
T  40436088 caaacatgctacttttggttttcttaaccattg 40436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 45088144 - 45088042
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    |||||||||||||||| | ||||||||||||||||| ||||| ||||| ||||   ||||||||  |||||||||||  |||||||||||||||||||||    
T  45088144 atagcattggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaa---tgttgaaatcaatgcaaacatactacttttggtttccttaacca 45088048  T
Q  278 ttgccc 283  Q
    ||||||    
T  45088047 ttgccc 45088042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 32584560 - 32584648
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||||||||||||| || |||| |||||||||||||||||||| |||||||| || |||  ||||||||| ||||||||||||||||    
T  32584560 gaaaatggtaaaaagtaatgaattcaactttttaaaagttaaaatattgttgaatctcatgggaacatgttaattttggtttccttaac 32584648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 51290561 - 51290473
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaattta 212  Q
    |||||||| || ||||| ||||| |||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||    
T  51290561 gagaatgctaaccattgtccttgggacattggataaggggataaaattagaaatatagcattggaaaatgatgaaaagtgataaattta 51290473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 52341672 - 52341581
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||||||| | |||| |||| ||||||||||||||||||| |||||||||||||| | |||||||||||  || ||||||||||||||||    
T  52341672 ttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttccttaac 52341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 35675211 - 35675319
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||| |||| || ||||||||| ||||||||||||||||||||||||| ||||||||   |||||||||||  |||||||| |    
T  35675211 aaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgat 35675310  T
Q  267 ttccttaac 275  Q
    || ||||||    
T  35675311 tttcttaac 35675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 9693528 - 9693606
Alignment:
Q  203 gataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    |||||||||||||||||||||||  |||| |||||||||| |||||||||||| || |||||  |||||||||||||||    
T  9693528 gataaatttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttgacttccttaaccattgc 9693606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 19876187 - 19876257
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttta 220  Q
    |||||||||||||||||||| |||||| |||| |||||||||| || ||||||||||||||||||||||||    
T  19876187 cattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 15986338 - 15986237
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    |||| |||||||| ||||||| | ||||||| ||||||||||| | ||| ||||||||   |||||||||||  ||||||| ||||||||||||||||||    
T  15986338 attgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttccttaaccattgcc 15986239  T
Q  283 ct 284  Q
    ||    
T  15986238 ct 15986237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 20456641 - 20456540
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    |||| |||||| | |||||| || ||||||| |||||||| |||||||| ||||||||   |||||||||||| |||||||| ||||||||| |||||||    
T  20456641 attgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttccttaatcattgcc 20456542  T
Q  283 ct 284  Q
    ||    
T  20456541 ct 20456540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 30618054 - 30617930
Alignment:
Q  151 cattggataaggggataaa-atagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||| |||| ||||||| ||||||| || ||||||| ||||| | |||||  || |||||||||||||||||||| |||| |||||||| | ||||||    
T  30618054 cattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttgaatccaatgca 30617955  T
Q  250 aacatgttacttttggtttccttaa 274  Q
    | | |  ||||||||||||||||||    
T  30617954 atcctactacttttggtttccttaa 30617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 1457584 - 1457663
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||   ||||||||| | ||||||||| |||||||||    
T  1457584 taaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttccttaa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 3769897 - 3769831
Alignment:
Q  171 tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgtt 237  Q
    |||||| || |||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  3769897 tagaaatattgcattgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgtt 3769831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 35927309 - 35927379
Alignment:
Q  181 gcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaa 251  Q
    ||||| ||||||||| ||||  ||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  35927309 gcattagaaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaatctaatgcaaa 35927379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 31494682 - 31494799
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||| | ||||||| ||||||||  |||||||||||||||| |  ||||  ||||||||   |||| ||| || |||||||||||    
T  31494682 aaaatagaaacattgtatttggaaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttggt 31494781  T
Q  267 ttccttaaccattgccct 284  Q
    ||||||||||||||||||    
T  31494782 ttccttaaccattgccct 31494799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 51018400 - 51018517
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || |||||| |||||||| ||||||||  ||||||||||||||||| ||||||  ||||||||   |||| ||| ||  |||||||  |    
T  51018400 aaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactacttttaat 51018499  T
Q  267 ttccttaaccattgccct 284  Q
    ||| ||||||||||||||    
T  51018500 ttctttaaccattgccct 51018517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 35511201 - 35511264
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    |||||||||| || | ||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  35511201 aaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaa 35511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 31487840 - 31487754
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    |||||||||||   ||||| |||||||||||||| || ||| ||||||||| ||||| || ||||||||||||||| ||||||||||    
T  31487840 cattgcccttggagcattgaataaggggataaaaataaaaatatagcattgaaaaatagttaaaagtgataaatttgactttttaaa 31487754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 30199807 - 30199914
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||| ||| || |||||| |||||| ||||||||||| || |||| ||||||||||||||||| || ||||| | |||| ||||   |||||||| ||    
T  30199807 aaaatataaatattgcattgaaaaatgataaaaagtgatgaaattaattttttaaaagttaaaatattattgaatccaatgtaaactcattacttttagt 30199906  T
Q  267 ttccttaa 274  Q
    || |||||    
T  30199907 tttcttaa 30199914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 52021106 - 52021047
Alignment:
Q  181 gcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| ||||  ||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  52021106 gcattgaaaaactgtaaaaaatgataaatttaactttttaaatgttaaaatattgttgaa 52021047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 966656 - 966562
Alignment:
Q  181 gcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| |||||| |||||| | || ||||||||||||||||| ||||||| |||||||| | |||| |||  |  |||||||| ||||||||||    
T  966656 gcattgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttccttaac 966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 13966648 - 13966574
Alignment:
Q  166 taaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||| ||| || |||||||||||||||||||| | || ||||| |||||||||||||| | || ||||||||    
T  13966648 taaaatataaatattgcattggaaaatggtaaaaaataatgaatttgactttttaaaagttgacatattgttgaa 13966574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 316
Target Start/End: Original strand, 36486723 - 36486856
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||| ||||| || |||||    ||| ||| || |||| |||| ||||||||| ||||  |    
T  36486723 attggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaattctatgtaaatatattacgtttgatttccttaatcattatc 36486822  T
Q  283 ctcagggctgaggacaatggttagcaagacccaa 316  Q
    || || | | ||| ||||||||||||||| ||||    
T  36486823 ctgagagatcagggcaatggttagcaagatccaa 36486856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 39418155 - 39418212
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||  ||||||||    
T  39418155 attggataatggtaaaaagtgatatgtttgactttttaaaagttaaaaaattgttgaa 39418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 39158363 - 39158455
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||| ||| ||| |||||||||  |||||||||||||||| ||||||| ||||| ||   |||| ||||||  |||||||| ||||||||||    
T  39158363 attgggaaagggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttgatttccttaac 39158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 46823544 - 46823488
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttga 239  Q
    ||||||||||||| |||||| || ||||||||||||||||||| ||||  |||||||    
T  46823544 attggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttga 46823488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 49483169 - 49483122
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||||||| |||||||||| |||| ||||||| ||||||||||    
T  49483169 attggaaaatggtgaaaagtgatagatttgactttttcaaagttaaaa 49483122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 11996140 - 11996182
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagt 225  Q
    ||||||||||||| |||||||||| |||||||||| |||||||    
T  11996140 attggaaaatggtgaaaagtgatagatttaactttctaaaagt 11996182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 13498138 - 13498224
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaaca 253  Q
    |||||||||| || | |||||||||| ||||| |  ||| ||||||||||||||||||| ||||  |||||||| | |||| |||||    
T  13498138 aaaatagaaatattgtattggaaaatagtaaagaacgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaaca 13498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 27545950 - 27545877
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttt-aaaagttaaaatgttgttgaa 240  Q
    |||||||||| || |||||| |||||| ||||| ||||| ||||||||||||| |||| ||||||| ||||||||    
T  27545950 aaaatagaaatattgcattgaaaaatgataaaa-gtgatgaatttaactttttgaaaacttaaaatattgttgaa 27545877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 23260793 - 23260728
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaag-tgataaatttaactttttaaaagttaaaat 231  Q
    |||||| ||| || ||||||  ||||||| ||||| |||| |||||||||||||||||||||||||    
T  23260793 aaaataaaaatattgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaat 23260728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 25928499 - 25928454
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  25928499 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 25928454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 53484687 - 53484634
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||| ||||||| |||||  ||| ||||||||||| ||||||||||||||||||    
T  53484687 attgaaaaatgggaaaaaaagatgaatttaactttctaaaagttaaaatgttgt 53484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 32415700 - 32415542
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||  |||||||||||||| | |||||||||| ||||||||| |||||| ||||||||| ||||| || |||||| ||||||||||||||||||||    
T  32415700 gagaatgttaatcattgcccttgaggcattggataaagggataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaa 32415601  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32415600 gtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgcc 32415542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 125 - 286
Target Start/End: Original strand, 36730131 - 36730293
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||||||| || |||||||||||||||||||| || ||| |||| |||| |||||||| |||||||||||||||||||||||||||    
T  36730131 gagaatgctaaccattgcccttatggcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaa 36730230  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctca 286  Q
    || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  36730231 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccctca 36730293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 135 - 282
Target Start/End: Original strand, 8847440 - 8847588
Alignment:
Q  135 atcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgt 233  Q
    |||||||| |||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  8847440 atcattgcacttgggacattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatat 8847539  T
Q  234 tgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||||  |||| ||||||| ||||||||||||||||||||||||||    
T  8847540 tgttgaaaacaatgtaaacatgctacttttggtttccttaaccattgcc 8847588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 118 - 280
Target Start/End: Complemental strand, 46317624 - 46317461
Alignment:
Q  118 aaagatagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactt 216  Q
    ||||| || |||||| || ||||||||||| |||||||||||||  ||||||| |||||| ||| |||||||||||| | |||| |||||||||||||||    
T  46317624 aaagaaagggaatgctaaccattgcccttgagacattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactt 46317525  T
Q  217 tttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  46317524 tttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttccttaaccattg 46317461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 125 - 279
Target Start/End: Original strand, 8715480 - 8715634
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    |||||||| || ||||| ||||  | ||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8715480 gagaatgctaaccattgtccttagggcattggataaggggtaaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaag 8715579  T
Q  225 ttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    | |||||||||||||||| |||||||||||| ||||||| | |||||||||||||    
T  8715580 tcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatt 8715634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 125 - 279
Target Start/End: Original strand, 9067367 - 9067521
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    |||||||| || ||||| ||||  | ||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9067367 gagaatgctaaccattgtccttagggcattggataaggggtaaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaag 9067466  T
Q  225 ttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    | |||||||||||||||| |||||||||||| ||||||| | |||||||||||||    
T  9067467 tcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatt 9067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 137 - 284
Target Start/End: Complemental strand, 35306451 - 35306303
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||||||||| |  ||||||||||||||||||| |||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||     
T  35306451 cattgcccttgggcaattggataaggggataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatgtta 35306352  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    ||||||  |||||||||||| |||||||||||||||||| |||||||||    
T  35306351 ttgaaatcaatgcaaacatgctacttttggtttccttaagcattgccct 35306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 44570364 - 44570523
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggat-aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||| ||||| ||||| |||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  44570364 gagaatgctaaccattgcccttggggcattcgataaagggatcaaaatagaaatataacattggaaaatggtgaaaagtgataactttaactttttaaaa 44570463  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || |||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||    
T  44570464 gtcaaaatgttgttgaaatcaatgcaaacatgctacttttggcttccttaaccattgccc 44570523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 151 - 289
Target Start/End: Original strand, 51817316 - 51817455
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    ||||| ||||| |||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||    
T  51817316 cattgaataagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaataca 51817415  T
Q  250 aacatgttacttttggtttccttaaccattgccctcaggg 289  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  51817416 aacatgctacttttggcttccttaaccattgccctcaggg 51817455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 125 - 282
Target Start/End: Original strand, 25102300 - 25102457
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| |||||||||||| | ||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||| |||    
T  25102300 gagaatgctaaccattgcccttgggacattggataatgagataaaaatagaaatatagcattggaaaatggtaaaaagtgataaatt-aatttttttaaa 25102398  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    |||||||| |||||||||| |||||||| ||| ||||||||||||||||||| ||||||    
T  25102399 gttaaaatattgttgaaaccaatgcaaatatgctacttttggtttccttaactattgcc 25102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 4759854 - 4759978
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||| ||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  4759854 cattggataaagggataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgca 4759953  T
Q  250 aacatgttacttttggtttccttaa 274  Q
    |||||||||||||||| ||||||||    
T  4759954 aacatgttacttttggcttccttaa 4759978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 134 - 280
Target Start/End: Complemental strand, 10854985 - 10854834
Alignment:
Q  134 aatcattgcccttgtgacattggataaggggat-----aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaa 228  Q
    |||||||||||||| | ||||||||||||||||     ||| |||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  10854985 aatcattgcccttggggcattggataaggggatggataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaactttttaaaagttaa 10854886  T
Q  229 aatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||| |||||    
T  10854885 aatgttgttgaaaccaatgcaaacatgctacttttggcttccttaatcattg 10854834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 116 - 280
Target Start/End: Complemental strand, 37509251 - 37509086
Alignment:
Q  116 taaaagatagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaac 214  Q
    ||||| || |||||||| || ||||||| ||| | |||||||||||||||||||| | ||||   ||||||||||||| || ||||||||||||||||||    
T  37509251 taaaaaattgagaatgctaaccattgcctttggggcattggataaggggataaaaattgaaatgcagcattggaaaatagtgaaaagtgataaatttaac 37509152  T
Q  215 tttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    ||||||||||| ||||| |||||||||| |||||||| ||||||||||||  ||||||||||||||    
T  37509151 tttttaaaagtcaaaatattgttgaaaccaatgcaaatatgttacttttgacttccttaaccattg 37509086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 29915553 - 29915709
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | | |||||||||||||||||| || ||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  29915553 gagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaa 29915652  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    || ||||||| |||||||| |||||||||||  ||||||||| |||||||| |||||    
T  29915653 gtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttccttaatcattg 29915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 29964706 - 29964862
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | | |||||||||||||||||| || ||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  29964706 gagaatgctaaccattgcccttggggcgttggataaggggataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaa 29964805  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    || ||||||| |||||||| |||||||||||  ||||||||| |||||||| |||||    
T  29964806 gtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttccttaatcattg 29964862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 271
Target Start/End: Original strand, 44695649 - 44695796
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||| || ||| |||   |||||||||||| |||| ||||||||||||||||||||||    
T  44695649 gagaatgctaatcattgtcattgggacattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaatttaactttttaaaa 44695748  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttcct 271  Q
     |||||||||||||||||  |||||||||||||||||||||| |||||    
T  44695749 attaaaatgttgttgaaatcaatgcaaacatgttacttttggcttcct 44695796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 167 - 289
Target Start/End: Complemental strand, 12051126 - 12051004
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| |||| |||| |||||  | |||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||     
T  12051126 aaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttggc 12051027  T
Q  267 ttccttaaccattgccctcaggg 289  Q
    |||||||||||||||||| ||||    
T  12051026 ttccttaaccattgccctgaggg 12051004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 20227405 - 20227514
Alignment:
Q  171 tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttcc 270  Q
    |||||| ||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||  ||||    
T  20227405 tagaaatatagcattgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaatgttattgaaaccaatacaaacatgttacttttgacttcc 20227504  T
Q  271 ttaaccattg 280  Q
    |||| |||||    
T  20227505 ttaatcattg 20227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 12905292 - 12905415
Alignment:
Q  156 gataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacat 254  Q
    ||||||||||||||| |||||| ||| ||||| |||||||| |||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  12905292 gataaggggataaaaatagaaatataacattg-aaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaaaccaatgcaaacat 12905390  T
Q  255 gttacttttggtttccttaaccatt 279  Q
    | ||||||| | |||||||| ||||    
T  12905391 gctactttttgcttccttaatcatt 12905415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 52570870 - 52570755
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaac--atgttacttttg 264  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||  ||| ||||||||    
T  52570870 aaaatagaaatatagtattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaaaccaatgcaaacatatgctacttttg 52570771  T
Q  265 gtttccttaaccattg 280  Q
    |  |||||||||||||    
T  52570770 gcatccttaaccattg 52570755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 31647362 - 31647278
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||||||| |||||||||||||||    
T  31647362 aaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaaccattgc 31647278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 21324612 - 21324496
Alignment:
Q  158 taaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgtt 257  Q
    |||| |||||||||||||| || |||||||||| || | |||||||||| |||||||||||||||||||||||| |||||||| |  |||||| ||| ||    
T  21324612 taagcggataaaatagaaatattgcattggaaa-tgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaatccgatgcaatcatatt 21324514  T
Q  258 acttttggtttccttaac 275  Q
    |||||| ||||| |||||    
T  21324513 acttttagtttctttaac 21324496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 1804019 - 1803919
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||| ||||| | |||||||||||||||||||| |||||| |||  |||| |||| |||||||| |||||||||||||||| |||||    
T  1804019 gagaatgctaatcattgtccttggggcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaatttaactttgtaaaa 1803920  T
Q  224 g 224  Q
    |    
T  1803919 g 1803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 34060803 - 34060895
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||   |||||||  ||||||||||    
T  34060803 attgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttccttaac 34060895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 18791 - 18881
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| |||| |||||||| |||||| || ||||||| ||| ||| ||||||||| ||||||||||||||||| ||||||| ||||||||    
T  18791 cattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 18881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 41346047 - 41345977
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaaca 253  Q
    |||| ||||| || |||||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  41346047 attgaaaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaaaccaatgcaaaca 41345977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 18949 - 19022
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || ||||||| ||| ||| ||||||||| ||||||||||||||||| ||||||| ||||||||    
T  18949 aaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 19022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 274
Target Start/End: Original strand, 45899547 - 45899672
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggt-aaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgc 248  Q
    ||||||||||| | |||||| |||||| ||   ||||||||||| | |||||||||| ||||||| ||||||||||| ||||| ||||||||   ||||     
T  45899547 cattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgt 45899646  T
Q  249 aaacatgttacttttggtttccttaa 274  Q
    ||||||  ||||||||||||||||||    
T  45899647 aaacatactacttttggtttccttaa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 11317037 - 11316970
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaa 251  Q
    |||||||||||| |||||| || ||||||||||||||||||| ||||| || ||||| ||||||||||    
T  11317037 ttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaatgcaaa 11316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 26850535 - 26850579
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaat 231  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  26850535 gaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaat 26850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 34750293 - 34750351
Alignment:
Q  182 cattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| |||| ||||||||| |||||||||||||| || ||||||| ||||||||    
T  34750293 cattggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaa 34750351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 48136701 - 48136790
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaac 214  Q
    |||||||| || ||||| ||||| |  |||||||||||| |||||| |||||| ||||||||||||||| ||  |||||||||||||||||    
T  48136701 gagaatgctaaccattgtccttggggtattggataagggaataaaaatagaaatatagcattggaaaattgt-gaaagtgataaatttaac 48136790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 11675399 - 11675293
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | |||| ||||||||||||  |||  |||||||||||||||| || ||||| |||||||| | ||||| ||| |   |||||||||    
T  11675399 aaaatagaaatattgtattgaaaaatggtaaaa--tgacgaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccacttttggt 11675302  T
Q  267 ttccttaac 275  Q
    |||||||||    
T  11675301 ttccttaac 11675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 39974827 - 39974900
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| ||| || ||||| ||||||| | | ||||||| |||||||||||||||||||||||||  |||||||    
T  39974827 aaaataaaaatattgcattagaaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaa 39974900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 50420744 - 50420699
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||    
T  50420744 taaaaagtgatagatttaactttttaaaagttaaaaaattgttgaa 50420699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 46160575 - 46160500
Alignment:
Q  192 tggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtt 267  Q
    |||| ||||||||| ||| |||||||| ||| |||||||  |||||||| ||||||| |||||  |||||||||||    
T  46160575 tggtgaaaagtgatgaatgtaacttttaaaaggttaaaaaattgttgaatctaatgcgaacatactacttttggtt 46160500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 49976185 - 49976232
Alignment:
Q  190 aatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgtt 237  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| |||||    
T  49976185 aatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 271202 - 271288
Alignment:
Q  182 cattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggttt 268  Q
    |||||||||| | |||||| | || ||||| ||||||||||||||||||  |||||||| | ||| ||||| |  ||||||||||||    
T  271202 cattggaaaacgataaaaaataatgaatttgactttttaaaagttaaaacattgttgaatccaatacaaactttctacttttggttt 271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 6822837 - 6822879
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagtt 226  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  6822837 ttggaaagtggtaaaaagtgatgaattcaactttttaaaagtt 6822879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 12060096 - 12060153
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||||| | |||||||||| |||| | ||||||||||||||||  ||||||||    
T  12060096 attggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgttgaa 12060153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 5e-51; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 27209696 - 27209862
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| | |||||||||| ||||||||| |||||| ||| |||||||||||||| |||| ||||||||||||||||||||||    
T  27209696 gagaatgctaaccattgtccttggggcattggataaagggataaaaatagaaatataacattggaaaatggtgaaaattgataaatttaactttttaaaa 27209795  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||    
T  27209796 gttaaaatgttgttgaaaccaatgcaaacatcctacttttggcttccttaaccattgccctcagggc 27209862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 125 - 277
Target Start/End: Complemental strand, 34874698 - 34874545
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  34874698 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaattttttaaaa 34874599  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    || |||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  34874598 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacca 34874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 137 - 283
Target Start/End: Complemental strand, 11386100 - 11385953
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||| ||||| |||||| |||||  |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11386100 cattgtccttgggacattagataattggataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttg 11386001  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  11386000 ttgaaaccaatgcaaacatgctacttttggttttcttaaccattgccc 11385953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 41147453 - 41147612
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| | |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||| |||||||||||||||||    
T  41147453 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaa 41147552  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || ||||| |||||||||| |||||||||||| ||||||||  |||||||||||||||||    
T  41147553 gtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttccttaaccattgccc 41147612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 4940741 - 4940875
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||| ||| ||    
T  4940741 cattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaatattgttaaaaccaataca 4940840  T
Q  250 aacatgttacttttggtttccttaaccattgccct 284  Q
    |||||| || |||||||||||||||| ||||||||    
T  4940841 aacatgctatttttggtttccttaactattgccct 4940875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 7190450 - 7190616
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || | ||||||||| | |||||| |||| |||||||| |||||| ||||||||  |||||| | |||||||||||||||||||||||||||    
T  7190450 gagaatgctaacctttgcccttggggcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaa 7190549  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||| ||| |||||    
T  7190550 gttaaaatggtgttgaaactaatgcaaacatgctacttttagcttccttaaccattgtcctaagggc 7190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 125 - 286
Target Start/End: Original strand, 22346212 - 22346374
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | | ||||||||||| |||||| |||||| |||| |||| |||||||| ||||||||||||||||| |||||||||    
T  22346212 gagaatgctaaccattgcccttggggctttggataagggaataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaa 22346311  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctca 286  Q
    || ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||| |||||    
T  22346312 gtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgtcctca 22346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 49508721 - 49508864
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||    
T  49508721 cattgcccttggggcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaa-gtgataaatttaactttttaaaagtcaaaatattg 49508819  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    | ||||| |||||||||||| ||||||||| ||| ||||||||||    
T  49508820 tcgaaaccaatgcaaacatgctacttttggcttctttaaccattg 49508864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 28277484 - 28277610
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    |||||||||| |||||||| |||||| ||| ||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaa 28277583  T
Q  251 acatgttacttttggtttccttaacca 277  Q
    |||||||||||||| ||||||||||||    
T  28277584 acatgttacttttgatttccttaacca 28277610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 286
Target Start/End: Complemental strand, 43433906 - 43433744
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||  ||||| |||| | |||||||||||||||||||| |||||| |||| |||  |||||||| |||||||||||||||||||||||||||    
T  43433906 gagaatgctaactattgctcttggggcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaa 43433807  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctca 286  Q
     |||||||||||||||||| ||| |||||||  ||||||||| ||||||||||||| ||||||    
T  43433806 attaaaatgttgttgaaaccaatacaaacatactacttttggcttccttaaccattaccctca 43433744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 47655346 - 47655495
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||  ||||||| |||||||||||||| |||||  ||||||||| |||||||| |||| ||||||||||||||||||||||    
T  47655346 gagaatgctaaccattgcccttaagacattgaataaggggataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaactttttaaaa 47655445  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttcctta 273  Q
    || |||||||||||||||| |||||||||||| ||||||||  |||||||    
T  47655446 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttgccttcctta 47655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 284
Target Start/End: Complemental strand, 50154561 - 50154444
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||| ||| ||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  50154561 aaaatataaatatagcattgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaaaccaatgcaaacatgttacttttggc 50154462  T
Q  267 ttccttaaccattgccct 284  Q
    ||||||||||||| ||||    
T  50154461 ttccttaaccattaccct 50154444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 49902030 - 49901906
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    |||||||||| |||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  49902030 attggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaaaccaatgcaa 49901931  T
Q  251 acatgttacttttggtttccttaac 275  Q
    ||||| ||||||||| |||||||||    
T  49901930 acatgatacttttggcttccttaac 49901906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 6170569 - 6170684
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| ||||||||||||||| |  |||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||      
T  6170569 aaaatagaaatatagcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttgac 6170668  T
Q  267 ttccttaaccattgcc 282  Q
    ||||||||||||||||    
T  6170669 ttccttaaccattgcc 6170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 932141 - 932287
Alignment:
Q  134 aatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatg 232  Q
    ||||||||  |||| | |||||||||||||||||||| |||||| |||||||||||||||| | |||| | |||||||||| ||||||||||| ||||||    
T  932141 aatcattgttcttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaattttttaaaagtcaaaatg 932240  T
Q  233 ttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    ||||||||||||||||||||||| |||||||   |||||||||||||    
T  932241 ttgttgaaactaatgcaaacatgctacttttaccttccttaaccatt 932287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 2125682 - 2125838
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||  |||| | |||||||||||||||||||| |||||| ||||||||| ||||| || |||||||||||||||||||||||||||    
T  2125682 gagaatgctaaccattgttcttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaa 2125781  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    || ||||||||| |||||| ||| ||| |||||||||||||  ||| ||||||||||    
T  2125782 gtcaaaatgttgatgaaacaaatacaaccatgttacttttgacttctttaaccattg 2125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 24140903 - 24140744
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||| ||| | ||||| |||||||||||||| |||||| |||  ||||||||||||| ||| |||||||| |||||||||| |||    
T  24140903 gagaatgctaaccattgcctttggggcattg-ataaggggataaaaatagaaatatactattggaaaatggtgaaacgtgataaacttaacttttttaaa 24140805  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    || |||||||||||||||| |||||||||||| || |||||| ||||||||||||||||||    
T  24140804 gtcaaaatgttgttgaaaccaatgcaaacatgctatttttggcttccttaaccattgccct 24140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 33930070 - 33929947
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| || ||| ||||||||| ||||| || |||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  33930070 attggataaggggataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 33929971  T
Q  251 acatgttacttttggtttccttaa 274  Q
    ||||| ||||||||| ||||||||    
T  33929970 acatgctacttttggcttccttaa 33929947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 11385797 - 11385946
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    |||||||||||   |||||||||||||||||||| |||||| |||| ||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  11385797 cattgcccttgcagcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttg 11385896  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    ||||||| |||| |   ||| ||||| |||  ||||||||||||||||||    
T  11385897 ttgaaaccaatgtaggaatgctacttatggcatccttaaccattgccctc 11385946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 42607326 - 42607438
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| || ||| ||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  42607326 attggataaggggataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 42607425  T
Q  251 acatgttactttt 263  Q
    ||||| |||||||    
T  42607426 acatgctactttt 42607438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 47895411 - 47895308
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  47895411 atagtattgaaaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttggcttccttaacca 47895312  T
Q  278 ttgc 281  Q
    ||||    
T  47895311 ttgc 47895308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 31975618 - 31975460
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggata-aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| |  ||||||||| | |||| ||||||||| ||| ||||| |||||| ||||||||| |||||||||||||||||||    
T  31975618 gagaatgctaaccattgcccttgaggtattggataaagagatataaatagaaatataacattgaaaaatgataaaaagtggtaaatttaactttttaaaa 31975519  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
     | ||||| ||||| |||||||||||||||||||| |||| | || |||||||||||||    
T  31975518 atcaaaatattgttaaaactaatgcaaacatgttatttttagctttcttaaccattgcc 31975460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 151 - 284
Target Start/End: Complemental strand, 52396547 - 52396414
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| |||||| |||| |||| |||||| ||||| ||||||||||||||||||||||||| ||||| || ||||||| ||||||    
T  52396547 cattggataaggggataaaaatagaaatatagtattgaaaaatgataaaa-gtgataaatttaactttttaaaagtcaaaatattattgaaacaaatgca 52396449  T
Q  250 aacatgttacttttggtttccttaaccattgccct 284  Q
    |||||| || ||||  |||||||||||||||||||    
T  52396448 aacatgctatttttaatttccttaaccattgccct 52396414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 123 - 251
Target Start/End: Complemental strand, 4656149 - 4656020
Alignment:
Q  123 tagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaa 221  Q
    |||||||||  |||||||||| | |  |||||||||||||  |||||| || ||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  4656149 tagagaatgttaatcattgccttcggaacattggataaggaaataaaaataaaaatataacattggaaaatagtaaaaagtgataaatttaactttttaa 4656050  T
Q  222 aagttaaaatgttgttgaaactaatgcaaa 251  Q
    || |||||||||||||||||||||||||||    
T  4656049 aaattaaaatgttgttgaaactaatgcaaa 4656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 40845379 - 40845253
Alignment:
Q  128 aatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagtt 226  Q
    ||||| || ||||||||||| ||||||| |||||||||||||| |||||| |||| |||| |||||||| ||||||||||||||||||||||||||| |     
T  40845379 aatgctaaccattgcccttgagacattgaataaggggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatc 40845280  T
Q  227 aaaatgttgttgaaactaatgcaaaca 253  Q
    ||||| |||||||||| || |||||||    
T  40845279 aaaatattgttgaaaccaaagcaaaca 40845253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 264
Target Start/End: Original strand, 28850885 - 28851024
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||| |||||| | |||||| |||||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  28850885 gagaatgctaaccattgcccttggggcattagataagagaataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaa 28850984  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttg 264  Q
    || ||||  |||||||||| |||||||| ||| ||||||||    
T  28850985 gtcaaaa-attgttgaaaccaatgcaaatatgctacttttg 28851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 32213876 - 32213988
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    |||||| |||| |||||| ||||||||||||||| |||||| | | |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  32213876 cattgctcttgggacattagataaggggataaaaatagaaatagaacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttg 32213975  T
Q  236 ttgaaactaatgc 248  Q
    ||||||| |||||    
T  32213976 ttgaaaccaatgc 32213988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 45721857 - 45721728
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||| ||||||| || ||| ||| ||||||||||||||||||| |||||||||||||||||||||| | ||||||||    |||  ||||||    
T  45721857 cattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaatgtta---aaatcaatgca 45721761  T
Q  250 aacatgttacttttggtttccttaaccattgcc 282  Q
    |||||| |||||||| |||||||||||||||||    
T  45721760 aacatgctacttttgatttccttaaccattgcc 45721728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 29966928 - 29966800
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttta-aaagttaaaatgttgttgaaactaatgc 248  Q
    |||||||||||||||||||| || ||| ||||||||| ||||||| ||||| |||||||||||| |||||  ||||| ||||| |||||||||| |||||    
T  29966928 cattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaaaccaatgc 29966829  T
Q  249 aaacatgttacttttggtttccttaacca 277  Q
    ||||||| ||||||||  |||||||||||    
T  29966828 aaacatgctacttttgacttccttaacca 29966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 50295434 - 50295549
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgc- 248  Q
    |||||||||||||| ||||| |||||| |||| |||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||  |||||     
T  50295434 cattggataagggggtaaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaatcaatgca 50295533  T
Q  249 aaacatgttacttttg 264  Q
    ||||||| ||||||||    
T  50295534 aaacatgctacttttg 50295549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 284
Target Start/End: Complemental strand, 8244207 - 8244068
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaa-atagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    |||||| |||| | ||||||||||||||||||| ||||||| ||| |||||||||||| |||    |||||||||||||||||| |||      |||||     
T  8244207 cattgctcttggggcattggataaggggataaatatagaaatataacattggaaaatgataa----tgataaatttaactttttcaaac-----atgttt 8244117  T
Q  236 ttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    ||||||| |||| |||||||||| |||||| ||||||||||||||||||    
T  8244116 ttgaaaccaatggaaacatgttatttttggcttccttaaccattgccct 8244068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 263
Target Start/End: Original strand, 26469557 - 26469696
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||||| ||||||||  | ||||||||| ||||||||| || ||| ||||||||| |||||  | |||| ||||||||||||||||||||||    
T  26469557 gagaatgctaatcactgcccttggaatattggataaagggataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaa 26469656  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    || ||||| || ||||||| |||| ||||||  |||||||    
T  26469657 gtcaaaatattattgaaaccaatgaaaacatactactttt 26469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 41898878 - 41898950
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| || | |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41898878 aaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaa 41898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 17403015 - 17402928
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||| |||  |  |||||||||||| ||||||    
T  17403015 aaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaatctaatgtaaaactactacttttggttttcttaac 17402928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 48938723 - 48938611
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||| ||||||||| |||||||| ||||||| |||||||||||| ||||  ||||||||  ||||| ||| ||  ||||||||||    
T  48938723 aaaatagaaatattgtattagaaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttggt 48938625  T
Q  267 ttccttaaccattg 280  Q
    ||||||||||||||    
T  48938624 ttccttaaccattg 48938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 51424245 - 51424137
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | |||| ||||| |  ||||||||| |||||||||||||||| |||||||  |||||||| | |||| |||||| |||||||||||    
T  51424245 aaaatagaaatattgtattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggt 51424146  T
Q  267 ttccttaac 275  Q
    ||| |||||    
T  51424145 ttctttaac 51424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 14331925 - 14331802
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||| ||||||| |||| |||  ||||||||||||||||||| ||||  ||||||||   |||| ||| ||  || |||||||    
T  14331925 aaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggt 14331826  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    |||||||||||||||||| |||||    
T  14331825 ttccttaaccattgccctgagggc 14331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 44359690 - 44359813
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | || || ||||||| ||||||||  ||||||||||||||||||| ||||  ||||||||   |||| ||| ||  || |||||||    
T  44359690 aaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggt 44359789  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    |||||||||||||||||| |||||    
T  44359790 ttccttaaccattgccctgagggc 44359813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 40920294 - 40920165
Alignment:
Q  149 gacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtg--ataaatttaactttttaaaagttaaaatgttgttgaaactaa 245  Q
    |||||||| |||| |||||||| |||||| || ||||||  || |||| |||||||  || ||||||||||||||||||||||||| |||||||| | ||    
T  40920294 gacattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaa 40920195  T
Q  246 tgcaaacatgttacttttggtttccttaac 275  Q
    ||||||     |||||||||||||||||||    
T  40920194 tgcaaatccactacttttggtttccttaac 40920165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 44286930 - 44286864
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    |||| |||||||||||||||||||||| ||||||| || || |||| ||||||||||||||||||||    
T  44286930 aaaaatgataaatttaactttttaaaaattaaaatattattaaaaccaatgcaaacatgttactttt 44286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 41493013 - 41492924
Alignment:
Q  151 cattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| |||| |||||||||||||| || ||||||| || |||| ||||||||| ||||| || |||||||||||||||| ||| ||||    
T  41493013 cattggttaagaggataaaatagaaatattgcattgggaagtggtgaaaagtgatgaattttacattttaaaagttaaaatattgatgaa 41492924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 43168229 - 43168106
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||| ||||||| ||||||||  | ||||||||||||||||| ||||  ||||||||   |||| ||| ||  |||||||| |    
T  43168229 aaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttgat 43168130  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    ||||||||||||| |||| |||||    
T  43168129 ttccttaaccatttccctgagggc 43168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 30222678 - 30222613
Alignment:
Q  198 aaagtgataaatttaactttttaaaa-gttaaaatgttgttgaaactaatgcaaacatgttacttt 262  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| |||||||| ||| ||||||    
T  30222678 aaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaatatgctacttt 30222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 27210792 - 27210705
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagtt-aaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    |||||||| |||| |||| |||||||||||||||||||| |||| |||||||||  |||||||||  | ||||||||| ||| |||||    
T  27210792 aaaatggtgaaaaatgatcaatttaactttttaaaagttaaaaaagttgttgaatttaatgcaaatttattacttttgatttacttaa 27210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 5945508 - 5945450
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagt 225  Q
    |||||||||| ||  ||||| |||||||| ||||||||||||||| |||||||||||||    
T  5945508 aaaatagaaatatgacattgaaaaatggtgaaaagtgataaattttactttttaaaagt 5945450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 16691382 - 16691309
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || | ||||| |||||||||||| |||  ||||||||||||||||||| ||||  ||||||||    
T  16691382 aaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaa 16691309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 8892789 - 8892901
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||||||||||| |||||| |  ||||||||||||||||||| ||||  ||||| ||   |||  ||| ||  ||||||| ||    
T  8892789 aaaatagaaacatcgtattggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttttagt 8892888  T
Q  267 ttccttaaccatt 279  Q
    |||||||||||||    
T  8892889 ttccttaaccatt 8892901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 9055897 - 9055941
Alignment:
Q  234 tgttgaaactaatgcaaacatgttacttttggtttccttaaccat 278  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  9055897 tgttgagactaatgcaaacatgctacttttggcttccttaaccat 9055941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 44043538 - 44043500
Alignment:
Q  192 tggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  44043538 tggtaaaaagtgatatatttaactttttaaaagtcaaaa 44043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 10161024 - 10161069
Alignment:
Q  207 aatttaactttttaaaagttaaaatgttgttgaaactaatgcaaac 252  Q
    ||||||||||||||||||||||||| | ||||||  ||||||||||    
T  10161024 aatttaactttttaaaagttaaaatatcgttgaatttaatgcaaac 10161069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 46296231 - 46296276
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| | |||||||||||||||||||||| ||||| ||||||||    
T  46296231 taaaaaataataaatttaactttttaaaagtcaaaatattgttgaa 46296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 23328493 - 23328437
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| ||||||||||||| | |  ||||||||||||||||||  ||||||||    
T  23328493 ttggaaaatagtaaaaagtgatagactagactttttaaaagttaaaaaattgttgaa 23328437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 34644225 - 34644145
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| |||| ||||| ||| ||||||||||||||| ||||||||   |||| |||| |  || ||||||||||||||||    
T  34644225 taaaaaatgatgaatttgactatttaaaagttaaaatattgttgaattcaatgtaaacttagtagttttggtttccttaac 34644145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 8e-50; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 29034818 - 29034658
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| | |||||||||||||||||||| || ||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  29034818 gagaatgctaaccattgtccttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 29034719  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    || ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  29034718 gtcaaaatgttgttgaaactaatgcaaacatgctacttttggctttcttaaccattgccct 29034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 24359713 - 24359839
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24359713 attggataaggggataaaaatagaaatatagcaatggaaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaa 24359812  T
Q  251 acatgttacttttggtttccttaacca 277  Q
    ||||| ||||||||| |||||||||||    
T  24359813 acatgctacttttggcttccttaacca 24359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 123 - 280
Target Start/End: Original strand, 5240308 - 5240466
Alignment:
Q  123 tagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaa 221  Q
    |||||||||| || ||||| ||||| | |||||||||| ||||||||| |||||| |||| |||| |||||||| |||||||||||||||||||||||||    
T  5240308 tagagaatgctaaccattgtccttgaggcattggataaagggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaa 5240407  T
Q  222 aagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    |||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||    
T  5240408 aagtcaaaatgttattgaaaccaatgcaaacatgctacttttggcttccttaaccattg 5240466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 149 - 286
Target Start/End: Complemental strand, 42222328 - 42222190
Alignment:
Q  149 gacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatg 247  Q
    |||||| ||||||||||||||| |||||| || | ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||     
T  42222328 gacattagataaggggataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaata 42222229  T
Q  248 caaacatgttacttttggtttccttaaccattgccctca 286  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  42222228 caaacatgttacttttagtttccttaaccattgccctca 42222190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 125 - 263
Target Start/End: Complemental strand, 40763380 - 40763241
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| ||| ||||| |||||||| |||||||||||||||||||||||||||    
T  40763380 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaa 40763281  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    ||||||||||||||||||| |||||||| ||| |||||||    
T  40763280 gttaaaatgttgttgaaaccaatgcaaatatgctactttt 40763241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 125 - 285
Target Start/End: Original strand, 46478537 - 46478694
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||||||||   ||||||||||||||||||||| |||||| ||| ||||| ||||| || |||| ||||||||||||||||||||||    
T  46478537 gagaatgctaatcattgccctt---acattggataaggggataaaaatagaaatatatcattgaaaaatagtgaaaa-tgataaatttaactttttaaaa 46478632  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||    
T  46478633 gttaaaatattgttgaaactaatgcaaatatgttacttttggcttcgttaaccattgtcctc 46478694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 8380545 - 8380411
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| || ||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||    
T  8380545 attggataaggggataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgaaa 8380446  T
Q  251 acatgttacttttggtttccttaaccattgccctc 285  Q
    ||||  ||||||||| |||||||||||||||||||    
T  8380445 acatactacttttggcttccttaaccattgccctc 8380411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 125 - 314
Target Start/End: Original strand, 27053471 - 27053662
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||| | |||||||| ||||  | |||||||||| ||||||||| |||||| |||||||  ||||||||| |||||||||||||||||||||||||||    
T  27053471 gagaatactaatcattgtccttagggcattggataaagggataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaactttttaaaa 27053570  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca--ttgccctcagggctgaggacaatggttagcaagaccc 314  Q
    || ||||| |||||||||| |||||||||||  |||||||||||||||||||||  ||||||| |   |||||| ||||||||||||||||||    
T  27053571 gtcaaaatattgttgaaaccaatgcaaacattctacttttggtttccttaaccacattgcccttacc-ctgagggcaatggttagcaagaccc 27053662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 125 - 288
Target Start/End: Original strand, 7322931 - 7323095
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| || |||||||||| |||||||| |||||| ||| | ||| |||||||| ||||||||||||||||| |||||||||    
T  7322931 gagaatgctaaccattgcccttgagatattggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaattttttaaaa 7323030  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagg 288  Q
    || |||||||||||||||| |||||||||||| ||||||||  ||| ||||||||||| ||||||    
T  7323031 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttctttaaccattgctctcagg 7323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 1910374 - 1910215
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    |||||||| |||||||||||||  | |||| ||||||||   |||||||||| ||| |||| ||||||||| |||| |||||||||||||||||||||||    
T  1910374 gagaatgctaatcattgcccttagggcatttgataagggataaaaatagaaatataacattagaaaatggtgaaaaatgataaatttaactttttaaaag 1910275  T
Q  225 ttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    |||||||||||||||||| |||| ||||||| ||||||||  ||| ||||||||||||||    
T  1910274 ttaaaatgttgttgaaacaaatgtaaacatgctacttttgacttctttaaccattgccct 1910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 286
Target Start/End: Complemental strand, 8292876 - 8292714
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||| | |||   |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||  ||||||||||    
T  8292876 gagaatgctaatcattgtctttggagcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaatttgcctttttaaaa 8292777  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctca 286  Q
    || |||||||||||||||  ||| |||||||| ||||||||  ||||||||||||||||||||    
T  8292776 gtcaaaatgttgttgaaatcaatccaaacatgctacttttgacttccttaaccattgccctca 8292714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 43567496 - 43567623
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||||||||| | |||||||||||| ||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  43567496 cattgcccttggggcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 43567595  T
Q  236 ttgaaactaatgcaaacatgttactttt 263  Q
    ||||||| |||||||||||| |||||||    
T  43567596 ttgaaaccaatgcaaacatgatactttt 43567623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 22521691 - 22521561
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    ||||||||||| |||||||| |||||| |||||||||||||||| | | |||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  22521691 cattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaatgca 22521592  T
Q  250 aacatgttacttttggtttccttaaccattg 280  Q
    |||||| ||||||||  || |||||||||||    
T  22521591 aacatgctacttttgactttcttaaccattg 22521561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 29687547 - 29687457
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  29687547 ttggaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 29687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 49069660 - 49069531
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||  ||||||| |||||| |||| |||| |||||||| ||||||||||||| ||||||||||||| | || || |||||||||| ||| ||    
T  49069660 cattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaaccaataca 49069561  T
Q  250 aacatgttacttttggtttccttaaccatt 279  Q
    ||||||||||||||||||||||||||||||    
T  49069560 aacatgttacttttggtttccttaaccatt 49069531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 151 - 286
Target Start/End: Original strand, 41188790 - 41188926
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||| |||||| |||||||| || ||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||  ||||||    
T  41188790 catttgataagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaatgctgttgaaatcaatgca 41188889  T
Q  250 aacatgttacttttggtttccttaaccattgccctca 286  Q
    |||||  ||| ||||| |||||||||||||| |||||    
T  41188890 aacatactacatttggcttccttaaccattgtcctca 41188926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 3681797 - 3681699
Alignment:
Q  153 ttggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    |||||||||||||||||| || ||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3681797 ttggataaggggataaaaataaaaatacaacattggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaa 3681699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 125 - 283
Target Start/End: Complemental strand, 36279250 - 36279094
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||| | |||| | ||||||||||  |||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  36279250 gagaatgctaaccattactcttggggcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaa 36279151  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
     | ||||   |||||||| ||||||||||||| ||||||||  || ||||||||||||||    
T  36279150 atcaaaa---tgttgaaattaatgcaaacatgctacttttgcctttcttaaccattgccc 36279094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 274
Target Start/End: Original strand, 5347950 - 5348097
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggata-aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||| |||||  | ||||| ||||||| ||| ||||||||| ||| |||||||||||| | |||||||||||||||||||||||||||    
T  5347950 gagaatgctaaccattacccttagggcattgaataagggaatataaatagaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaa 5348049  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    || ||||   ||||||||| |||||||||||| ||||||||| ||||||||    
T  5348050 gtcaaaa---tgttgaaaccaatgcaaacatgctacttttggcttccttaa 5348097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 125 - 265
Target Start/End: Original strand, 30538458 - 30538596
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||| ||||| |||||| ||||||||||||||| |||||| |||| ||| |||||| || |||| ||||||||||||||||||||||    
T  30538458 gagaatgctaatcattgtccttgggacattagataaggggataaaaatagaaatatagtattagaaaatagtgaaaaatgataaatttaactttttaaaa 30538557  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttgg 265  Q
     | ||||   ||||||||  ||||||||||||||||||||||    
T  30538558 atcaaaa---tgttgaaatcaatgcaaacatgttacttttgg 30538596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 22707179 - 22707049
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    |||||||| || ||||||| ||| | ||||| |||| ||   |||||||||| |||||||||||||||  | |||| |||||||||| ||||||||||||    
T  22707179 gagaatgctaaccattgcctttggggcattgaataaaggataaaaatagaaatatagcattggaaaataatgaaaaatgataaattttactttttaaaag 22707080  T
Q  225 ttaaaatgttgttgaaactaatgcaaacatg 255  Q
    |||| ||||||||||||| ||||||||||||    
T  22707079 ttaacatgttgttgaaaccaatgcaaacatg 22707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 48454812 - 48454907
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaat 231  Q
    |||| |||||| | |||||||||||||||||||| |||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  48454812 cattacccttggggcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 48454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 263
Target Start/End: Original strand, 43958087 - 43958200
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||| ||||||| |||||| |||| ||| |||||| || |||| |||||||||||| ||||||||||| ||||| ||  |||||| ||||||    
T  43958087 cattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaattttttaaaagtcaaaatattactgaaaccaatgca 43958186  T
Q  250 aacatgttactttt 263  Q
    ||||||||||||||    
T  43958187 aacatgttactttt 43958200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 40194884 - 40194818
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  40194884 aaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttt 40194818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 264
Target Start/End: Original strand, 8258634 - 8258756
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||||||||| | ||| |||||||||||||||| |||||| ||     || |||||||| ||||||||||||||||||||||||| ||| | ||| ||||    
T  8258634 attgcccttggggcatcggataaggggataaaaatagaaatat-----tgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgt 8258728  T
Q  237 tgaaactaatgcaaacatgttacttttg 264  Q
    |||||| |||||||||||  ||||||||    
T  8258729 tgaaaccaatgcaaacatactacttttg 8258756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 46042835 - 46042749
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacat 254  Q
    |||||||||| |||| |||| |||||||| |||||| |||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  46042835 aaaatagaaatatagtattg-aaaatggtgaaaagttataaatttaacttttttaaagtctaaatgttgttgaaaccaatgcaaacat 46042749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 276
Target Start/End: Original strand, 40066921 - 40067045
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| |||||| |||  |||| |||||||| |||| ||||||||||||||||||||||  |||||||||||| |||| ||| ||    
T  40066921 cattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaa-ataaaatgttgttaaaaccaataca 40067019  T
Q  250 aacatgttacttttggtttccttaacc 276  Q
    || ||  ||||||||  ||||||||||    
T  40067020 aa-atactacttttgccttccttaacc 40067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 44296945 - 44297030
Alignment:
Q  190 aatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| | |||||| | |||| |||| || |||||||||||||||||||    
T  44296945 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaac 44297030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 31626083 - 31626147
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaac 252  Q
    |||||| | ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  31626083 aaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaac 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 18529196 - 18529282
Alignment:
Q  189 aaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||| ||||||||| ||||||| |||||  |||| |||||||||||||| ||| |||||||||| || ||||||||| ||||||    
T  18529196 aaatggtgaaaagtgatgaatttaatttttttcaagtcaaaatgttgttgaatctattgcaaacatgctaattttggtttgcttaac 18529282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 16082473 - 16082570
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    ||||||||| |||| |||| |||||||| |||||||||||||  | |||||||| | |||||||||||  ||||||||| ||||||||| | ||||||    
T  16082473 gaaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttggattccttaacaagtgccct 16082570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 32204270 - 32204197
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || |||||| |||||| | ||||||||| ||||||||||||||||||||||||| || |||||    
T  32204270 aaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaa 32204197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 35404310 - 35404399
Alignment:
Q  202 tgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggct 291  Q
    |||| ||||||||||||||||||||||||| | |||||| |||||| |||| |  |||||||| |||||||||| | |||||| ||||||    
T  35404310 tgatgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaacctactacttttgatttccttaacaactgcccttagggct 35404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 48879742 - 48879645
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    ||||| |||| || ||||||||  ||||||| ||||||||||||||||| ||||||||  ||||| ||| ||| |||||||| ||| |||||||||||    
T  48879742 attgggaaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaaccattg 48879645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 29959095 - 29959035
Alignment:
Q  227 aaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcag 287  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||| ||||| ||||||    
T  29959095 aaaatgttgttgaaaccaatgcaaacataatacttttggtttccttaatcattgtcctcag 29959035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 16957711 - 16957639
Alignment:
Q  209 tttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||||||||||||| ||||| ||||||||  ||||| ||| || |||||||||| ||||||||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttgg-ttccttaaccattgcc 16957639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 16931962 - 16931867
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    |||||||||| |||||| ||||  ||||||||||||||||||| ||||| ||||||||  ||||| ||| ||  || ||||||||| ||||||||||    
T  16931962 attggaaaatagtaaaa-gtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccatt 16931867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 16937345 - 16937250
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    |||||||||| |||||| ||||  ||||||||||||||||||| ||||| ||||||||  ||||| ||| ||  || ||||||||| ||||||||||    
T  16937345 attggaaaatagtaaaa-gtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccatt 16937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 279
Target Start/End: Original strand, 30388697 - 30388793
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    |||| |||||||| |||| |||||||||||||||||||||||| ||||| || ||||||  |||  ||||||  ||||||||  ||| |||||||||    
T  30388697 attgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaaccatt 30388793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 40774264 - 40774336
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| || |||||| |||||| | |||| |||| ||||||||||||||||||||||||| ||| ||||    
T  40774264 aaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaa 40774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 4686080 - 4686127
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  4686080 attgaaaaatggtgaaaagtgattaatttaactttttaaaagttaaaa 4686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 35239829 - 35239915
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||| | |||||   |||| |||||| |||||||| ||| |||||||    
T  35239829 aaaatgataaaacgtgatgaatttaactttttaaaagttaaaatgctattgaattcaatg-aaacatattactttttgttaccttaac 35239915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 6548603 - 6548533
Alignment:
Q  182 cattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaac 252  Q
    |||||| ||| ||| |||| |||| ||||||||||||||||||||||||| |||||| | | |||||||||    
T  6548603 cattgggaaacggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaac 6548533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 10575802 - 10575896
Alignment:
Q  189 aaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    ||||||| |||||||| |||||||||||||||||| |  |||| ||||||||   |||| ||| ||  |||||||| |||| |||||||||||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttgatttctttaaccattgccc 10575896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 31360313 - 31360363
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaacttt 217  Q
    |||||||||| || | ||||| |||||||||||||||||||||||||||||    
T  31360313 aaaatagaaatattgtattgggaaatggtaaaaagtgataaatttaacttt 31360363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 44260558 - 44260631
Alignment:
Q  202 tgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||| ||||||| ||||||||||  |||||||| |||||  ||||||||||||  || ||||||||||||||||    
T  44260558 tgatgaatttaattttttaaaagccaaaatgttattgaatttaatgcaaacatactaattttggtttccttaac 44260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 275
Target Start/End: Original strand, 1907586 - 1907717
Alignment:
Q  144 cttgtgacattggataaggggataaaat-agaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaac 242  Q
    |||| ||||||||||||  ||||||||  ||||| || | |||| ||||||||||||| | || ||||||| ||||||| | | ||||| ||||||||      
T  1907586 cttgagacattggataaaaggataaaaagagaaatattgtattgaaaaatggtaaaaaataatgaatttaattttttaataatcaaaatattgttgaatg 1907685  T
Q  243 taatgcaaacatgttacttttggtttccttaac 275  Q
     |||||||||||  ||| |||||||||||||||    
T  1907686 caatgcaaacat-atacatttggtttccttaac 1907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 3720135 - 3720198
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||| || || ||||||  |||||||  ||| |||||||||||||||||||||||||||||    
T  3720135 aaaatagtaatattgcattgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaa 3720198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 5543112 - 5543061
Alignment:
Q  189 aaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||| |||||||||| |||| ||||||||||||||||||  ||||||||    
T  5543112 aaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaa 5543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 35003673 - 35003630
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||    
T  35003673 gaaaatggtgaaaagtgattaatttaactttttaaaaattaaaa 35003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 43189688 - 43189731
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||    
T  43189688 aaaagtgatgaatttgactttttaaaagttaaaatattgttgaa 43189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 44391082 - 44391019
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaat 231  Q
    ||||||||| || ||||| |||||| ||||||| | || ||||| |||||||||||||||||||    
T  44391082 aaatagaaatattgcattagaaaattgtaaaaaattatgaatttgactttttaaaagttaaaat 44391019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 18800197 - 18800242
Alignment:
Q  195 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  18800197 taaagagtgataaatttaactttttaaaaattacaatattgttgaa 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 46423425 - 46423388
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagt 225  Q
    |||||||||||||||||||||||||| || ||||||||    
T  46423425 aaaatggtaaaaagtgataaatttaatttcttaaaagt 46423388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 5977757 - 5977809
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||| || |||||||||  |||||||||||||||||||||||  ||||||||    
T  5977757 aaaatagtgaaaagtgatggatttaactttttaaaagttaaaaaattgttgaa 5977809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 35653236 - 35653399
Alignment:
Q  128 aatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagtt 226  Q
    ||||| || |||||||||||   |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| ||| |     
T  35653236 aatgctaaccattgcccttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttgaaaatc 35653335  T
Q  227 aaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||    
T  35653336 aaaatgttgttgaaaccaatgcaaacatggtacttttggcttccttaaccattgccctgagggc 35653399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 34546882 - 34546743
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| |||||| ||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34546882 attggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaattttttaaaagttaaaatgttgttgaaactaatgcaa 34546783  T
Q  251 acatgttacttttggtttccttaaccattgccctcagggc 290  Q
    | ||| ||||||||| |||||||||||||||||| |||||    
T  34546782 aaatgatacttttggcttccttaaccattgcccttagggc 34546743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 123 - 287
Target Start/End: Original strand, 4421940 - 4422105
Alignment:
Q  123 tagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaa 221  Q
    |||||||||  || ||||||||||  | ||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||     
T  4421940 tagagaatgttaaccattgcccttagggcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttac 4422039  T
Q  222 aagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcag 287  Q
    || | ||||||||||||||   |||||||||||||||||||||  |||||||||||||||||||||    
T  4422040 aaatcaaaatgttgttgaagtcaatgcaaacatgttacttttgacttccttaaccattgccctcag 4422105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 16315512 - 16315676
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || || |||||||  | ||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||  |||||||||| |    
T  16315512 gagaatgctaaccactgccctttgggcatcggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaat--aactttttaata 16315609  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    || |||||||||||||||| |||||||||| | ||||||||| |||||||||||||||||| |||||    
T  16315610 gtcaaaatgttgttgaaaccaatgcaaacacgctacttttggcttccttaaccattgccctgagggc 16315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 125 - 279
Target Start/End: Complemental strand, 35945377 - 35945222
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||||||||| |||| |  |||||||||||| |||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||||||     
T  35945377 gagaatgctaatcattgctcttggggtattggataagggaataaaaatagaaatataacattggaaaatagtgaaaagtgataaatttaactttttaaat 35945278  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    |||||||||||||||||||||||||||| ||| || |||||| || ||||||||||    
T  35945277 gttaaaatgttgttgaaactaatgcaaatatgatatttttggctttcttaaccatt 35945222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 137 - 285
Target Start/End: Original strand, 4962507 - 4962655
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    ||||||||||| ||||||||||||||    |||||||||| ||| |||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||    
T  4962507 cattgcccttgggacattggataaggaataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgt 4962606  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |||||||||| |||||||| ||||||||  || | ||||||||||||||    
T  4962607 tgaaactaatacaaacatgctacttttgtctttcctaaccattgccctc 4962655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 264
Target Start/End: Original strand, 43414042 - 43414182
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| ||  |||||||||| ||||  |||||||||||||||| |||||| |||||||||||||||||| |||| |||| |||||||||||||||||    
T  43414042 gagaatgctaagaattgcccttgggacaagggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaatttaactttttaaaa 43414141  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttg 264  Q
     | |||||||||||||||| |||||||||||||||||||||    
T  43414142 atcaaaatgttgttgaaaccaatgcaaacatgttacttttg 43414182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 139 - 281
Target Start/End: Original strand, 25017283 - 25017426
Alignment:
Q  139 ttgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgtt 237  Q
    ||||||||| | |||||||||||||||||||| |||||| |||| |||||||||| || ||||||||||||||||||||||||||||| ||||| | |||    
T  25017283 ttgcccttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgtt 25017382  T
Q  238 gaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    ||||| ||| |||||||| ||||||||  |||||||||||||||    
T  25017383 gaaaccaatacaaacatgctacttttgacttccttaaccattgc 25017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 5151594 - 5151468
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5151594 catttgataaggggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgca 5151495  T
Q  250 aacatgttacttttggtttccttaacc 276  Q
    |||||| ||||||||  ||||||||||    
T  5151494 aacatgctacttttgccttccttaacc 5151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 124 - 276
Target Start/End: Original strand, 28143100 - 28143253
Alignment:
Q  124 agagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    ||||||||| || ||||||||||| ||||||| |||||| ||||||| |||||| ||| |||||| ||||||| |||| | |||||||||||||||||||    
T  28143100 agagaatgctaaccattgcccttgggacattgaataaggagataaaaatagaaatataacattgggaaatggtgaaaaataataaatttaactttttaaa 28143199  T
Q  223 agttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacc 276  Q
    | | |||||||||||||||||||| |||||||| ||||||||| ||| ||||||    
T  28143200 aatcaaaatgttgttgaaactaatacaaacatgctacttttggcttctttaacc 28143253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 13951258 - 13951373
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtt 267  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||  ||||||||||| |||||||||||||||| ||||||| |||| ||||||||| |    
T  13951258 aaatagaaatatagcattgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaaaccaatgcaagcatgctacttttggct 13951357  T
Q  268 tccttaaccattgccc 283  Q
    ||||||||||||||||    
T  13951358 tccttaaccattgccc 13951373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 39568035 - 39567868
Alignment:
Q  124 agagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    ||||||||  || ||||||||||| | |||||||||| ||||||||| || ||| |||||||||||||||| | |||| |||||||||||||||||||||    
T  39568035 agagaatgataaccattgcccttggggcattggataatgggataaaaatataaatatagcattggaaaatgatgaaaaatgataaatttaactttttaaa 39567936  T
Q  223 agttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    | | ||||  |||||||||| |||||||||||| ||||||||  |||||||| ||||||||| |||||    
T  39567935 aatcaaaacattgttgaaaccaatgcaaacatgctacttttgacttccttaatcattgccctgagggc 39567868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 169 - 290
Target Start/End: Complemental strand, 12914261 - 12914140
Alignment:
Q  169 aatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggttt 268  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||| | ||||| |||||||||| |||||||||||  ||||||||| ||    
T  12914261 aatagaaatatagcattgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggctt 12914162  T
Q  269 ccttaaccattgccctcagggc 290  Q
    ||||||||||| ||||||||||    
T  12914161 ccttaaccattaccctcagggc 12914140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 117 - 282
Target Start/End: Complemental strand, 8410281 - 8410115
Alignment:
Q  117 aaaagatagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaact 215  Q
    |||| ||||||||||| || ||||||| ||| |  ||| ||||||||||||||| || ||| |||| ||| |||||||||||||| ||||||||||||||    
T  8410281 aaaaaatagagaatgctaaccattgcctttggggtattagataaggggataaaaataaaaatatagtattagaaaatggtaaaaaatgataaatttaact 8410182  T
Q  216 ttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    |||||||||| |||||||| || |||| ||| |||||||| || |||||| |||||||| |||||||    
T  8410181 ttttaaaagtcaaaatgttattaaaaccaatacaaacatgctagttttggcttccttaatcattgcc 8410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 3639072 - 3639207
Alignment:
Q  144 cttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaac 242  Q
    |||| ||||||| |||||||||||||| |||||| ||| |||||||||||||| || |||||||||||||| |||||||||| | |||| ||||||||||    
T  3639072 cttgagacattgaataaggggataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaattttttaaaag-tcaaatattgttgaaac 3639170  T
Q  243 taatgcaaacatgttacttttggtttccttaaccatt 279  Q
     ||||||||||| |||||||||  |||||||||||||    
T  3639171 caatgcaaacatattacttttgacttccttaaccatt 3639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 25568304 - 25568428
Alignment:
Q  159 aaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgtt 257  Q
    |||||||||||| || ||| ||||||||| |||||| | |||||||||| |||||||||||||||| | |||||||| ||||||| ||||||||||||||    
T  25568304 aaggggataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaaccaatgcaaacatgtt 25568403  T
Q  258 acttttggtttccttaaccattgcc 282  Q
    | |||| ||||||||||||||||||    
T  25568404 aattttagtttccttaaccattgcc 25568428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 125 - 250
Target Start/End: Complemental strand, 37243977 - 37243852
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    |||||||| |||||||||||||| | |||||||||| ||   |||||| ||| |||  ||||||||||||| |||||||||||||||||||||||||||     
T  37243977 gagaatgctaatcattgcccttgaggcattggataaaggataaaaataaaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaa 37243878  T
Q  225 ttaaaatgttgttgaaactaatgcaa 250  Q
    |||||||||||||||||  |||||||    
T  37243877 ttaaaatgttgttgaaatcaatgcaa 37243852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 151 - 284
Target Start/End: Complemental strand, 27823364 - 27823233
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||   |||||||  ||| ||    
T  27823364 cattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaat---gttgaaatcaataca 27823268  T
Q  250 aacatgttacttttggtttccttaaccattgccct 284  Q
    |||||| || |||||  |||||||| |||||||||    
T  27823267 aacatgctaattttgacttccttaatcattgccct 27823233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 39693087 - 39692984
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    ||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||  ||| |||||||||||||||||  |||||||||||    
T  39693087 atagcattgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaacca 39692988  T
Q  278 ttgc 281  Q
    ||||    
T  39692987 ttgc 39692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 338754 - 338881
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||||||||| | |||||||||| ||||||||| || ||| ||   |||| |||||| ||||||||||||||||||||||||||||| | ||||| |||    
T  338754 cattgcccttggggcattggataaagggataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattg 338853  T
Q  236 ttgaaactaatgcaaacatgttactttt 263  Q
    ||||||| |||||||||||| |||||||    
T  338854 ttgaaacaaatgcaaacatgctactttt 338881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 1759922 - 1759821
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    ||||||||||| |||||||| |||||| |||| |||| |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  1759922 cattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaaccaatgca 1759823  T
Q  250 aa 251  Q
    ||    
T  1759822 aa 1759821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 12068195 - 12068307
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| || ||| |||||||| || |||||      
T  12068195 aaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgacaccaatacaaacatgcta-ttttgac 12068293  T
Q  267 ttccttaaccattg 280  Q
    || |||||||||||    
T  12068294 tttcttaaccattg 12068307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 1479140 - 1479232
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaac 242  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||  | ||||||||||||||||||||||||||||| |||||||| |||||||    
T  1479140 cattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaac 1479232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 39167683 - 39167538
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||||||||||| |||||| | |||||||||||||||||| | ||||  ||||| ||   |||| ||| || |||||||||||    
T  39167683 aaaatagaaacattgtattggaaaatggtgaaaagtaa-aaatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttggt 39167585  T
Q  267 ttccttaaccattgccctcagggc-tgaggacaatggttagcaagac 312  Q
    || ||||||||||||||| ||||| | ||| ||||||||||||||||    
T  39167584 tttcttaaccattgccctaagggcatcagggcaatggttagcaagac 39167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 15915960 - 15915871
Alignment:
Q  128 aatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactt 216  Q
    ||||| || |||||| |||| | ||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  15915960 aatgctaaccattgcacttggggcattggataagggaataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 4838322 - 4838259
Alignment:
Q  214 ctttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  4838322 ctttttaaaagtcaaaatattgttgaaactaatgcaaacatgttatttttggcttccttaacca 4838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 20184570 - 20184677
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtt 267  Q
    ||||||||| || ||||||  ||| ||| ||||||||| ||||| ||||||||||||||||||  |||||||| ||||| ||| ||| ||||||||| ||    
T  20184570 aaatagaaatattgcattgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatt 20184669  T
Q  268 tccttaac 275  Q
    ||||||||    
T  20184670 tccttaac 20184677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 40099450 - 40099352
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaa-tggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||| ||||||| ||||||||||||||| |||||| ||| ||||||||| |||| |||| |||||||||||||||||| |||||||| || ||||||||    
T  40099450 cattgtccttgtggcattggataagggga-aaaataaaaatatagcattgaaaaaatggtgaaaagtgataaatttaaccttttaaaaattgaaatgttg 40099352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 39335540 - 39335454
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||||  || |||||||||| ||||    
T  39335540 aaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaacataataattttggtttctttaa 39335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 10017599 - 10017727
Alignment:
Q  124 agagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    ||||||||  || ||||| ||| | |||||| |||||| |||||||| |||||| |||| | |||||| |||| |||| ||||||||  |||||||||||    
T  10017599 agagaatgttaaccattgtcctagagacatttgataagaggataaaaatagaaatatagtactggaaa-tggtgaaaattgataaat--aactttttaaa 10017695  T
Q  223 agttaaaatgttgttgaaactaatgcaaacat 254  Q
    ||||||||||||||| |||| |||||||||||    
T  10017696 agttaaaatgttgttaaaaccaatgcaaacat 10017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 10406873 - 10406772
Alignment:
Q  169 aatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggttt 268  Q
    |||||||| || | |||| |||||||  ||||||||||||||||| ||||||||  | ||||| |||||||| | |||||||| ||||||||||||||||    
T  10406873 aatagaaatattgtattgaaaaatggagaaaagtgataaatttaattttttaaat-tcaaaatattgttgaatccaatgcaaaaatgttacttttggttt 10406775  T
Q  269 cct 271  Q
    |||    
T  10406774 cct 10406772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 275
Target Start/End: Complemental strand, 678522 - 678430
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||||||||| |||||| || |||||||| |||||||||||||||  |||||||| | | || |||| || || ||||||||||||||||    
T  678522 attggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaatccattgtaaacctgctaattttggtttccttaac 678430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 19894906 - 19894798
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || |||||  |||||||| |||  |||| ||||||||||||||||||||||||| ||||| || | ||| ||||| |  |||||||| |    
T  19894906 aaaatagaaatattgcattaaaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaaccttatacttttgat 19894807  T
Q  267 ttccttaac 275  Q
    |||||||||    
T  19894806 ttccttaac 19894798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 38610313 - 38610386
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || |||||| |||||| ||||||||||  ||||||||||||||||||| ||||  ||||||||    
T  38610313 aaaatagaaacattgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaa 38610386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 15915083 - 15915014
Alignment:
Q  208 atttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccatt 279  Q
    |||||||||||||||||||||||| || ||||||  ||  |||||||  |||||||||||||||||||||||    
T  15915083 atttaactttttaaaagttaaaatatttttgaaatcaa--caaacatactacttttggtttccttaaccatt 15915014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 39042096 - 39042170
Alignment:
Q  207 aatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    ||||||| |||||||||||||||||||||||||    |||| ||||||| || |||||| ||| |||||||||||    
T  39042096 aatttaattttttaaaagttaaaatgttgttgatgtcaatgtaaacatgctatttttggcttctttaaccattgc 39042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 6823773 - 6823858
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaattt-aactttttaaaagttaaaatgttgttgaaactaatgcaaa 251  Q
    |||||||||| || | || |||||| |||  ||||| |||||||| |||||||||||||||||||| |||||||| | ||||||||    
T  6823773 aaaatagaaatattgtatcggaaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaa 6823858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 12349585 - 12349628
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||    
T  12349585 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaa 12349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 24288553 - 24288502
Alignment:
Q  189 aaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||| |||||||||| |||||||||||||||||||| ||  ||||||||    
T  24288553 aaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaa 24288502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 24373668 - 24373719
Alignment:
Q  189 aaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||| |||||||||| |||||||||||||||||||| ||  ||||||||    
T  24373668 aaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaa 24373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 28599691 - 28599738
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    |||||||||| || |||| |||||||||| ||||||||||||||||||    
T  28599691 attggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaa 28599738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 3015106 - 3015144
Alignment:
Q  202 tgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  3015106 tgattaatttaactttttaaaagttaaaatattgttgaa 3015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 3241974 - 3242047
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||| ||| || ||||||| || | || |||| |||| |||| |||||||||||||||||||| ||||||||    
T  3241974 aaaataaaaatattgcattgggaagtagtgaaaattgatgaattaaactttttaaaagttaaaatattgttgaa 3242047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 16899635 - 16899680
Alignment:
Q  209 tttaactttttaaaagttaaaatgttgttgaaactaatgcaaacat 254  Q
    ||||||||||||||||| |||||||||||||| | ||| |||||||    
T  16899635 tttaactttttaaaagtcaaaatgttgttgaatccaatacaaacat 16899680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 27535167 - 27535114
Alignment:
Q  183 attggaaaatggtaaaaagtgataaattt-aactttttaaaagttaaaatgttg 235  Q
    |||| |||||||| ||||||||| ||||| || |||||||||||||||||||||    
T  27535167 attgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaatgttg 27535114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 5058812 - 5058772
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaa 228  Q
    ||||| || ||||||||||||||||||||||||||| ||||    
T  5058812 aaaattgtgaaaagtgataaatttaactttttaaaaattaa 5058772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 17168763 - 17168691
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||| || |||||| |||| ||| |||| |||| ||||| ||||||||||| ||||||| ||| ||||    
T  17168763 aaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgactttttaaaatttaaaatattgctgaa 17168691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 28996285 - 28996229
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttga 239  Q
    ||||||||||||| ||||||  | |||| |||||||||||||||||||  |||||||    
T  28996285 attggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttga 28996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 149 - 284
Target Start/End: Complemental strand, 2966647 - 2966511
Alignment:
Q  149 gacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatg 247  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  2966647 gacattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatg 2966548  T
Q  248 caaacatgttacttttggtttccttaaccattgccct 284  Q
    |||| ||| ||||||| | ||||||||||||||||||    
T  2966547 caaatatgctacttttagcttccttaaccattgccct 2966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 125 - 284
Target Start/End: Complemental strand, 6999333 - 6999173
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||||   || | || ||||||||| ||||||| |||||| |||| ||||||||||||| |||| ||||||||||||||||||||||    
T  6999333 gagaatgctaatcattgcttctggggcaatggataaggagataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaa 6999234  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    || |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  6999233 gtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccct 6999173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 128 - 313
Target Start/End: Original strand, 39085773 - 39085952
Alignment:
Q  128 aatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagtt 226  Q
    ||||| || |||||| |||| |||||||||||| ||||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||     
T  39085773 aatgctaaccattgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtc 39085872  T
Q  227 aaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaagacc 313  Q
    |||||||||||||||  |||||||||||| | ||||||  |||||||||||||||        ||||||||||||||||||||||||    
T  39085873 aaaatgttgttgaaatcaatgcaaacatgctgcttttgacttccttaaccattgc-------tctgaggacaatggttagcaagacc 39085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 16361684 - 16361537
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    ||||||||||   ||||||||||||| |||||| |||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  16361684 attgcccttggagcattggataagggaataaaaatagaaatataacattggaaaatggtaaaaattgataaatttaactttataaaagtcaaaatgttgt 16361585  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
     ||||| |||||||||||||||||||||| |||||||| |||||||||    
T  16361584 cgaaaccaatgcaaacatgttacttttggcttccttaatcattgccct 16361537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 39401513 - 39401671
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| ||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  39401513 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataa-tttaactttttaaaa 39401611  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || ||||| |||||||||| ||| |||||||| ||||||||| |||||||||||||||||    
T  39401612 gtcaaaattttgttgaaaccaatacaaacatgctacttttggcttccttaaccattgccc 39401671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 765128 - 765258
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| ||| ||||||||||| || |||||||||||||||||||||||||||    
T  765128 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaa 765227  T
Q  224 gttaaaatgttgttgaaactaatgcaaacat 254  Q
    || |||||||||||||||| |||||||||||    
T  765228 gtcaaaatgttgttgaaaccaatgcaaacat 765258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 138 - 285
Target Start/End: Complemental strand, 862707 - 862559
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||||||||  | ||||| |||| ||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||    
T  862707 attgcccttagggcattgaataatgggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgt 862608  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |||||| |||||||||||| ||||||||| |||||||| ||||||||||    
T  862607 tgaaaccaatgcaaacatgctacttttggcttccttaatcattgccctc 862559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 288
Target Start/End: Complemental strand, 27495254 - 27495090
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||| |||| | ||||| |||||||||||||| || ||| ||| |||| ||||||||| |||||||||||||||||| ||||||||    
T  27495254 gagaatgctaaccattgcacttggggcattgaataaggggataaaaataaaaatataacattagaaaatggtgaaaagtgataaatttaacattttaaaa 27495155  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagg 288  Q
     | |||||||||||||||| |||||||||||  ||||||||  ||||||||||||||||||||||    
T  27495154 atcaaaatgttgttgaaaccaatgcaaacatactacttttgacttccttaaccattgccctcagg 27495090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 150 - 315
Target Start/End: Original strand, 17118376 - 17118542
Alignment:
Q  150 acattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgc 248  Q
    ||||||||||| ||||||||| |||||| |||  | ||||||||| | |||| |||||||||||||||||||||| | ||| |||||||||||| |||||    
T  17118376 acattggataaagggataaaaatagaaatataatactggaaaatgttgaaaaatgataaatttaactttttaaaactcaaa-tgttgttgaaaccaatgc 17118474  T
Q  249 aaacatgttacttttggtttccttaaccattgccctcagggc-tgaggacaatggttagcaagaccca 315  Q
    ||| |||||| |||||| |||||||||||||| ||||| ||| ||||| |||||||||||||||||||    
T  17118475 aaatatgttatttttggcttccttaaccattgtcctcaaggcatgagggcaatggttagcaagaccca 17118542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 125 - 285
Target Start/End: Original strand, 17074466 - 17074626
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||  | |||| ||||| ||||||||| |||||| ||| || |  |||||||| |||||||||||||||||||||||||||    
T  17074466 gagaatgctaaccattgcccttagggcattagataaagggataaaaatagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17074564  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |  ||||||||||||||||||||||||| ||| || |||||| |||||||||||||||||||    
T  17074565 gacaaaatgttgttgaaactaatgcaaatatgctatttttggcttccttaaccattgccctc 17074626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 41436582 - 41436448
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    |||| |||||||||||||| || ||| |||| |||| |||||| | |||||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  41436582 attgaataaggggataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatgcaa 41436483  T
Q  251 acatgttacttttggtttccttaaccattgccctc 285  Q
    ||||| ||||||||  ||| |||||||||||||||    
T  41436482 acatgctacttttgacttcattaaccattgccctc 41436448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 125 - 285
Target Start/End: Original strand, 17056036 - 17056196
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaata-gaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||  | |||||||||| ||||||||| | |||| ||| || |  |||||||| |||||||||||||||||||||||||||    
T  17056036 gagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17056134  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |  |||||||||||||||| |||||||| ||| || |||||| |||||||||||||||||||    
T  17056135 gacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgccctc 17056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 125 - 285
Target Start/End: Original strand, 17068483 - 17068643
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaata-gaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||  | |||||||||| ||||||||| | |||| ||| || |  |||||||| |||||||||||||||||||||||||||    
T  17068483 gagaatgctaaccattgcccttagggcattggataaagggataaaaaaagaaatataacacta-aaaatggtgaaaagtgataaatttaactttttaaaa 17068581  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctc 285  Q
    |  |||||||||||||||| |||||||| ||| || |||||| |||||||||||||||||||    
T  17068582 gacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgccctc 17068643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 23685689 - 23685788
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||| |||||||| |||||||    
T  23685689 attggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgttacttttggcttccttaaacattgcc 23685788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 33726498 - 33726355
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||||||||| | |||||||||||||||||||| || ||| |||| |||| |||||||| |||| | |||||||||||||| ||||||||||||| ||||    
T  33726498 attgcccttggggcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgt 33726399  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    |||||  ||| |||||||| || ||||| |||||||||||||||    
T  33726398 tgaaatcaatacaaacatgctatttttgatttccttaaccattg 33726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 17603933 - 17603811
Alignment:
Q  134 aatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatg 232  Q
    |||||||||||||| | |||||||||| | ||||||| |||||| ||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||    
T  17603933 aatcattgcccttggggcattggataacgcgataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaatg 17603834  T
Q  233 ttgttgaaactaatgcaaacatg 255  Q
    || ||||||  ||||||||||||    
T  17603833 ttattgaaatcaatgcaaacatg 17603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 33864474 - 33864349
Alignment:
Q  137 cattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttg 235  Q
    ||||||||||| ||||||| ||||| |||||||| || ||| || ||||||||||||||| |||||| ||||||||||| |||||||||| ||||| |||    
T  33864474 cattgcccttgagacattgaataagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattg 33864375  T
Q  236 ttgaaactaatgcaaacatgttactt 261  Q
    ||||||| |||||||| |||||||||    
T  33864374 ttgaaaccaatgcaaatatgttactt 33864349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 17095108 - 17095204
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| || |||||  ||||||||||||||||||    
T  17095108 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctatttttgcattccttaaccattgccct 17095204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 125 - 290
Target Start/End: Complemental strand, 1321299 - 1321132
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| |||||   ||||||||||| |||||||| |||||| ||| ||||||||||||||||||| | |||||||||||| |||||||    
T  1321299 gagaatgctaaccattgtccttggagcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaatttaactctttaaaa 1321200  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa-ccattgccctcagggc 290  Q
     | |||||||||||||||  |||| ||||||| ||  ||||| |||||||| |||||||||| |||||    
T  1321199 atcaaaatgttgttgaaatcaatgtaaacatgctaactttggcttccttaacccattgccctgagggc 1321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 9201484 - 9201638
Alignment:
Q  136 tcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgtt 234  Q
    |||||| ||||| |||||||||||| | ||||||| ||| || |||  |||  |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9201484 tcattgtccttgagacattggataatgagataaaaataggaatataatattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgtt 9201583  T
Q  235 gttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    |||| ||| ||| |||||||||||||||||  ||| ||||| |||||||| |||||    
T  9201584 gttg-aaccaatacaaacatgttacttttgacttctttaactattgccctgagggc 9201638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 11445379 - 11445454
Alignment:
Q  206 aaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11445379 aaatttaactttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgc 11445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 125 - 280
Target Start/End: Original strand, 44299659 - 44299815
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||||  ||| | |||||| |||| |||||||| |||||| ||||| | | |||||||| |||||||||||||||||| ||||||||    
T  44299659 gagaatgctaatcattgcttttggggcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaatttaacattttaaaa 44299758  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    || ||||| |||||||||| |||| || |||  || |||||| ||||||||||||||    
T  44299759 gtcaaaatattgttgaaaccaatgtaagcatactatttttggcttccttaaccattg 44299815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 151 - 278
Target Start/End: Original strand, 35445294 - 35445423
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttt-aaaagttaaaatgttgttgaaactaatgc 248  Q
    ||||| |||||||||||||| || ||| ||| ||||| |||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||| ||| |    
T  35445294 cattgaataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaaaccaatac 35445393  T
Q  249 aaacatgttacttttggtttccttaaccat 278  Q
    ||||||| ||||||||  || |||||||||    
T  35445394 aaacatgctacttttgacttgcttaaccat 35445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 464884 - 464770
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaag-tgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttgg 265  Q
    |||||||||| ||| ||||| |||||||||||||  |||||| |||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||      
T  464884 aaaatagaaatataacattgaaaaatggtaaaaaaatgataattttaactttttaaaagttaaaatgttattgaaatcaatacaaacatgttacttttaa 464785  T
Q  266 tttccttaaccattg 280  Q
     |||||||| |||||    
T  464784 cttccttaatcattg 464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 167 - 276
Target Start/End: Complemental strand, 44173207 - 44173099
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| ||||||||| |||||| | |||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||| ||| ||||||     
T  44173207 aaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaaaccaatacaaacatatta-ttttggc 44173109  T
Q  267 ttccttaacc 276  Q
    ||| ||||||    
T  44173108 ttctttaacc 44173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 15004985 - 15004905
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||  ||| |||||||    
T  15004985 aaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttgacttctttaacca 15004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 2239689 - 2239562
Alignment:
Q  149 gacattggataaggggataaa-atagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatg 247  Q
    |||||||| |||| ||||||| ||||||| || ||| || ||||||||||||| |||| ||||||||||||||||||||||||| |||||||| | |||     
T  2239689 gacattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaata 2239590  T
Q  248 caaacatgttacttttggtttccttaac 275  Q
    |||| ||  |||||||||| | ||||||    
T  2239589 caaatatactacttttggtattcttaac 2239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 13997880 - 13998013
Alignment:
Q  123 tagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaa 221  Q
    |||||||||| || ||||||  ||| |  ||| |||||||| |||||| |||||| ||||||||| ||||| || |||| ||||||||||||||||||||    
T  13997880 tagagaatgctaaccattgcttttgaggaattagataagggaataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaatttaactttttaa 13997979  T
Q  222 aagttaaaatgttgttgaaactaatgcaaacatg 255  Q
    || ||||||| |||||||||  ||| ||||||||    
T  13997980 aaattaaaatattgttgaaatcaatacaaacatg 13998013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 167 - 275
Target Start/End: Original strand, 34334182 - 34334290
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||| |||||||||||||| ||| ||||| ||||||||| || ||||||| |||||||| | ||| |||||||| ||||||| ||    
T  34334182 aaaatagaaatattgtatttgaaaatggtaaaaaatgacaaattaaactttttacaaattaaaatattgttgaatccaatacaaacatgctacttttagt 34334281  T
Q  267 ttccttaac 275  Q
    |||||||||    
T  34334282 ttccttaac 34334290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 11659334 - 11659233
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    |||| ||||| || ||||||||  ||||||||||||||||| ||||||| ||||||||   |||| ||| ||  | ||||||||||||||||||||||||    
T  11659334 attgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttccttaaccattgcc 11659235  T
Q  283 ct 284  Q
    ||    
T  11659234 ct 11659233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 34220639 - 34220740
Alignment:
Q  140 tgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttg 238  Q
    |||||||  |||||||| |||| |||||||| ||||||  | ||||||| || |||| ||||||||| ||||||| ||||||||||||||||| ||||||    
T  34220639 tgcccttaagacattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgttg 34220738  T
Q  239 aa 240  Q
    ||    
T  34220739 aa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 747528 - 747585
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||  ||||||||    
T  747528 attggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaa 747585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 33849034 - 33848957
Alignment:
Q  207 aatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    ||||||||||||||||||| |||   ||||||||  ||||  ||| || |||||||||||||||||||||||||||||    
T  33849034 aatttaactttttaaaagtcaaaccattgttgaatttaatataaatatattacttttggtttccttaaccattgccct 33848957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 41890182 - 41890255
Alignment:
Q  217 tttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||||||||||||||| |||||||| | ||||||||| |  ||||||||||||||||||| | |||||| |||||    
T  41890182 tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtttccttaacaaatgcccttagggc 41890255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 2136524 - 2136401
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || ||||||||||||| | |||||||   ||||| |||||| |||||| ||||| ||||||||   ||| ||||| |  || |||||||    
T  2136524 aaaatagaaatattgcattggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaatacaaacctactaattttggt 2136425  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    ||||||||| | |||||| |||||    
T  2136424 ttccttaacaagtgccctaagggc 2136401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 29260167 - 29260257
Alignment:
Q  185 tggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||||||| |||||||||| |||| |||||| |||||||||||  ||||||||   ||||| ||| | | | ||||||||||||||||    
T  29260167 tggaaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaattcaatgcgaacttatcatttttggtttccttaac 29260257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 3454743 - 3454791
Alignment:
Q  191 atggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  3454743 atggtaaaaagtgataactttaactttttaaaag-taaaatattgttgaa 3454791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 10900271 - 10900344
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| ||  ||||| |||||| ||||||||||| ||||| | ||||||||||||||||| || |||||    
T  10900271 aaaatagaaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaa 10900344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 242
Target Start/End: Original strand, 43140314 - 43140419
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||| ||||| || |||||||||| |||||||| || ||| ||| ||||| ||||||   |||| |||||||||||||||||||||| | ||||| || |    
T  43140314 attgtccttgagatattggataagaggataaaaataaaaatataacattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaatattat 43140413  T
Q  237 tgaaac 242  Q
    ||||||    
T  43140414 tgaaac 43140419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 11445313 - 11445364
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaacttttt 219  Q
    ||||||||| ||| ||||| |||||||| |||| ||||||||||||||||||    
T  11445313 aaatagaaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 34512714 - 34512671
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||    
T  34512714 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaa 34512671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 8327038 - 8327004
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaat 231  Q
    |||||||| ||||||||||||||||||||||||||    
T  8327038 aaaagtgaaaaatttaactttttaaaagttaaaat 8327004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 30831706 - 30831636
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgtt 237  Q
    |||||||||| || |||||  |||||  |||||| |||| ||||||||||||||||||| ||||| |||||    
T  30831706 aaaatagaaatattgcattaaaaaattataaaaaatgatgaatttaactttttaaaagtaaaaatattgtt 30831636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 2805441 - 2805373
Alignment:
Q  197 aaaagtgataaatttaacttttt--aaaagttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    ||||||||| |||||||||||||  |||||| ||||| |||||||| ||||| |||||||  |||||||    
T  2805441 aaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaatacaaacatactactttt 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 37230306 - 37230253
Alignment:
Q  169 aatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    |||||||| || | |||| |||||||| |||||||||||| |||||||||||||    
T  37230306 aatagaaatattgtattgaaaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 7e-41; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 125 - 277
Target Start/End: Original strand, 19389288 - 19389441
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||| | |||||||||||||||||||| |||||| |||| |||||||||| || |||||||||||||||||||||||||||    
T  19389288 gagaatgctaaccattgcccttggggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaa 19389387  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacca 277  Q
    || ||||| | |||||||  |||||||||||| |||||||| ||||||||||||    
T  19389388 gtcaaaatatcgttgaaaacaatgcaaacatgctacttttgatttccttaacca 19389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 4990064 - 4989909
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||| |||||| ||||||||||||||| || |||| |||||||||||||||||||||     
T  4990064 gagaatgctaatcattgtccttgtagcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaatttaactttttaaat 4989965  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    || ||||   ||||||||| |||||||||||| ||||||||  ||||||||||||||||    
T  4989964 gtcaaaa---tgttgaaaccaatgcaaacatgctacttttgacttccttaaccattgcc 4989909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 152 - 281
Target Start/End: Complemental strand, 10694911 - 10694781
Alignment:
Q  152 attggataaggggat-aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||| |||||| ||| |||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  10694911 attggataaggggattaaaataaaaatatagtatttaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaa 10694812  T
Q  251 acatgttacttttggtttccttaaccattgc 281  Q
    | ||| ||||||||| |||||||||||||||    
T  10694811 atatgatacttttggcttccttaaccattgc 10694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 156 - 265
Target Start/End: Complemental strand, 18069062 - 18068952
Alignment:
Q  156 gataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacat 254  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  18069062 gataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaaactaatgcaaacat 18068963  T
Q  255 gttacttttgg 265  Q
      |||||||||    
T  18068962 tatacttttgg 18068952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 8018866 - 8018733
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgc- 248  Q
    |||||||||||||||||||| |||||| |||  ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||     
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttaaaactaatgca 8018767  T
Q  249 aaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||  ||||||||| ||||||||||||||||    
T  8018766 aaacatactacttttggcttccttaaccattgcc 8018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 26672894 - 26672755
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||| ||||||||| |||||| |||||||||||||||| ||||||  ||||||||||| ||||||||||| |||||||||||||||| |||  ||    
T  26672894 attggataaagggataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaattttttaaaagtcaaaatgttgttgaaaccaatataa 26672795  T
Q  251 acatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||||  || ||||| |||||||||||||||||||||||||    
T  26672794 acatcgtatttttgatttccttaaccattgccctcagggc 26672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 274
Target Start/End: Original strand, 21016035 - 21016185
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||| ||| | | |||||||||||||||||| |||||| ||| ||||| |||||||| |||||||||| ||||||||||||||||    
T  21016035 gagaatgctaaccattgcctttgaggctttggataaggggataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaactttttaaaa 21016134  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    || |||||||||||||| | |||||||||||| ||||||||  ||||||||    
T  21016135 gtcaaaatgttgttgaagccaatgcaaacatgctacttttgacttccttaa 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 123 - 276
Target Start/End: Complemental strand, 45338137 - 45337983
Alignment:
Q  123 tagagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaa 221  Q
    |||||||||| || ||||| ||||  | |||||||||||||||||||| |||||| ||| ||||| |||||||| |||| ||||||||||||||||||||    
T  45338137 tagagaatgctaaccattgtcctttgggcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaatttaactttttaa 45338038  T
Q  222 aagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaacc 276  Q
    || | |||||||| |||| || |||||||||||  ||||||||||||||||||||    
T  45338037 aaatcaaaatgttattgagaccaatgcaaacatactacttttggtttccttaacc 45337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 14855394 - 14855513
Alignment:
Q  157 ataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatg 255  Q
    |||||||||||||| |||||| |||| |||  ||||| || ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  14855394 ataaggggataaaaatagaaatatagtattaaaaaatagtgaaaagagataaatttaacattttaaaagttaaaatgttgttaaaactaatgcaaacatg 14855493  T
Q  256 ttacttttggtttccttaac 275  Q
     |||||||||||||||||||    
T  14855494 ctacttttggtttccttaac 14855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 26195383 - 26195490
Alignment:
Q  157 ataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatg 255  Q
    |||||||||||||| |||||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  26195383 ataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatacaaacatg 26195482  T
Q  256 ttactttt 263  Q
     |||||||    
T  26195483 ctactttt 26195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 25249345 - 25249450
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||| ||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  25249345 cattggataagggggtaaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgca 25249444  T
Q  250 aacatg 255  Q
    ||||||    
T  25249445 aacatg 25249450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 6433632 - 6433509
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||| ||  ||||||||      
T  6433632 aaaataaaaatatagcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagatactacttttgtc 6433533  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    ||||||||||||||| || |||||    
T  6433532 ttccttaaccattgctctgagggc 6433509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 6939246 - 6939152
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttactt 261  Q
    |||||||||| ||| ||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6939246 aaaatagaaatataacattgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttactt 6939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 128 - 255
Target Start/End: Complemental strand, 21016362 - 21016234
Alignment:
Q  128 aatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagtt 226  Q
    ||||| || ||||||| ||| | | |||||||||||||||||| |||||| |||  |||| |||||||| |||||||||| ||||||||||||||||||     
T  21016362 aatgctaaccattgcctttggggctttggataaggggataaaaatagaaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtc 21016263  T
Q  227 aaaatgttgttgaaactaatgcaaacatg 255  Q
    |||||||||||||| | ||||||||||||    
T  21016262 aaaatgttgttgaagccaatgcaaacatg 21016234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 282
Target Start/End: Complemental strand, 37433369 - 37433239
Alignment:
Q  152 attggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaa 250  Q
    ||||||||||||||||||| | || | ||| ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37433369 attggataaggggataaaaatcgacatataacattgaaaaatgatgaaaagtgataaatttaactttttaaa-gttaaaatgttgttgaaaccaatgcaa 37433271  T
Q  251 acatgttacttttggtttccttaaccattgcc 282  Q
    ||||  |||||||   |||||||| |||||||    
T  37433270 acatactacttttaacttccttaatcattgcc 37433239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 33741525 - 33741637
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgagga 296  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||  |  ||||| |||||| || |||||  || |    
T  33741525 aaaaatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaatatgttacttttgactctcttaatcattgcactgagggc--agaa 33741622  T
Q  297 caatggttagcaaga 311  Q
    |||||||||||||||    
T  33741623 caatggttagcaaga 33741637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 280
Target Start/End: Complemental strand, 44874430 - 44874308
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| || ||| ||| ||||| |||||||| ||||||||||||||||| |||||||||        ||||||||||| ||||||    
T  44874430 cattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaaatttttaaaa--------gttgttgaaaccaatgca 44874339  T
Q  250 aacatgttacttttggtttccttaaccattg 280  Q
    |||||| ||||||||  ||||||||||||||    
T  44874338 aacatgctacttttgtcttccttaaccattg 44874308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 34713953 - 34714048
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttcctta 273  Q
    |||| |||| ||||||||  |||||||||||||| |||| |||||||| |||||||||||||||| |||||||||||| ||||||||  |||||||    
T  34713953 atagtattgaaaaatggtgcaaagtgataaatttcacttcttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcctta 34714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 5129434 - 5129545
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||||||||    |||| ||||||||||||||| | |||| ||||||||| |||||| | ||||||||||||||||| |||||||||    
T  5129434 gagaatgctaaccattgcccttagagcatttgataaggggataaaaattgaaatatagcattgaaaaatgatgaaaagtgataaatttaattttttaaaa 5129533  T
Q  224 gttaaaatgttg 235  Q
    || |||||||||    
T  5129534 gtcaaaatgttg 5129545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 26892874 - 26892795
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaat 246  Q
    |||||||||| |||  |||| ||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  26892874 aaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaat 26892795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 3174563 - 3174436
Alignment:
Q  153 ttggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaat----gttgttgaaactaatg 247  Q
    |||||| ||||||||||| |||||| ||   ||||||||||||| |||| | |||||||| ||||||||||||| |||||    ||||||||||| |||     
T  3174563 ttggatgaggggataaaaatagaaatattatattggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaataaatgttgttgaaaccaata 3174464  T
Q  248 caaacatgttacttttggtttccttaac 275  Q
    |||||||| ||||||||| |||||||||    
T  3174463 caaacatgctacttttggcttccttaac 3174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 7532890 - 7532767
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||| ||||||||||||| |||||| || | ||||||||||||| ||||||||| ||||||  ||||||||||||  ||| |||||||| | ||| ||    
T  7532890 cattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttaggtttttaaaagtt--aatattgttgaatccaattca 7532793  T
Q  250 aacatgttacttttggtttccttaac 275  Q
    ||| |  |||||||||||||||||||    
T  7532792 aacctactacttttggtttccttaac 7532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 20212433 - 20212518
Alignment:
Q  190 aatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| | |||||| | |||| |||| || |||||||||||||||||||    
T  20212433 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaac 20212518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 30351666 - 30351583
Alignment:
Q  181 gcattggaaaatggtaaaaa-gtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttactttt 263  Q
    |||||| ||||||||||||| ||||  | ||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||    
T  30351666 gcattgaaaaatggtaaaaaagtgacgagtttaactttttaaaagttaaaatattgttgaatccaatgcaaacatattactttt 30351583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 39972189 - 39972290
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||| ||||||| ||||||||| ||||| ||||||||||||||||||  ||||| ||   |||||||||||  || |||||||||||||||| | ||||    
T  39972189 attgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttggtttccttaactagtgcc 39972288  T
Q  283 ct 284  Q
    ||    
T  39972289 ct 39972290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 4308876 - 4308789
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||  ||||||| | ||| ||||| |  || ||||||||||||||||    
T  4308876 aaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaacctactatttttggtttccttaac 4308789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 7444317 - 7444258
Alignment:
Q  216 ttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||||||||||||| |||||||| ||||||||||| |  |||||||||||||||||||    
T  7444317 ttttaaaagttaaaatattgttgaatctaatgcaaacctactacttttggtttccttaac 7444258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 38870092 - 38869969
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || ||||||||||||| | ||||||||  |||| ||| |||||||||| ||||| ||| ||||   |||| ||| ||  ||||||||||    
T  38870092 aaaatagaaacattgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggt 38869993  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    |||||| |||||||| || |||||    
T  38869992 ttccttgaccattgctctgagggc 38869969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 6396315 - 6396378
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaa 251  Q
    |||||||| || ||| || |||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  6396315 aaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatctaatacaaa 6396378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 20169372 - 20169309
Alignment:
Q  168 aaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaat 231  Q
    ||||||||| || ||||| |||||| ||||||| | || ||||| |||||||||||||||||||    
T  20169372 aaatagaaatattgcattagaaaattgtaaaaaattatgaatttgactttttaaaagttaaaat 20169309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 35973927 - 35974005
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||| |||||||||||| |||||||||| |||||| ||||||||  | || ||||| | ||| |||||||||| |||||    
T  35973927 aaaaatgataaatttaattttttaaaagataaaatattgttgaatttcatacaaacttattatttttggtttcattaac 35974005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 17320000 - 17320045
Alignment:
Q  192 tggtaaaaagtgataaatttaactttttaaaagttaaaatgttgtt 237  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||||    
T  17320000 tggtgaaaagagatgaatttaactttttaaaagttaaaatattgtt 17320045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 39491858 - 39491891
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaa 230  Q
    ||||||||| ||||||||||||||||||||||||    
T  39491858 aaaagtgatgaatttaactttttaaaagttaaaa 39491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 5300263 - 5300203
Alignment:
Q  215 tttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||||||| ||||| ||||||||   ||||||||| |  |||||||||||||||||||    
T  5300263 tttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaac 5300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 25381708 - 25381796
Alignment:
Q  187 gaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||||| | ||||| |||| ||||| | ||||| ||||||||||| |||||| | | ||| ||||||| ||| |||| |||||||||||    
T  25381708 gaaaatagaaaaaaatgattaattttatttttttaaagttaaaatattgttgtatccaattcaaacattttatttttagtttccttaac 25381796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 16750 - 16908
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||||| |  | |||||||||||||||||||| |||||| ||||||||| ||||| || |||| |||||||| |||||||||||||    
T  16750 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 16848  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  16849 gtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccc 16908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 26918 - 27076
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||||| |  | |||||||||||||||||||| |||||| ||||||||| ||||| || |||| |||||||| |||||||||||||    
T  26918 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 27016  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  27017 gtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccc 27076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 125 - 283
Target Start/End: Original strand, 37084 - 37242
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || |||||||| |  | |||||||||||||||||||| |||||| ||||||||| ||||| || |||| |||||||| |||||||||||||    
T  37084 gagaatgctaaccattgcccatagggcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaa 37182  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    || ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  37183 gtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgccc 37242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 124 - 281
Target Start/End: Original strand, 7274191 - 7274349
Alignment:
Q  124 agagaatgccaatcattgcccttgtgacattggataaggggataaa-atagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    ||||||||  || ||||| | ||| ||||||||| ||||| ||||| ||||||| ||| ||||||||||||   |||||||||||||||||| |||||||    
T  7274191 agagaatgttaaccattgtctttgggacattggacaagggaataaatatagaaatataacattggaaaatgacgaaaagtgataaatttaacattttaaa 7274290  T
Q  223 agttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgc 281  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||    
T  7274291 agttaaaatgttgttgaaatcaatacaaacatgttacttttggtttccttaatcattgc 7274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 126 - 316
Target Start/End: Complemental strand, 10855562 - 10855379
Alignment:
Q  126 agaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaag 224  Q
    ||||||| || ||||| ||||| | |||| ||||||||||||||| |||||| |||  |||| |||||| | ||||||||||||||||||||||||||||    
T  10855562 agaatgctaaccattgtccttggggcatttgataaggggataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaag 10855463  T
Q  225 ttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaagacccaa 316  Q
    | ||||||||||||||||  ||||||| ||| |||||||| |||| |||||||||||||||       ||||||||||||||||||||||||    
T  10855462 tcaaaatgttgttgaaac-catgcaaatatgctacttttgatttctttaaccattgccctc-------aggacaatggttagcaagacccaa 10855379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 7875202 - 7875318
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||| |||||||||     
T  7875202 aaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcagacatgctacttttggc 7875301  T
Q  267 ttccttaaccattgccc 283  Q
    |||||||| ||||||||    
T  7875302 ttccttaatcattgccc 7875318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 12191598 - 12191466
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||  ||| ||    
T  12191598 cattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatcaataca 12191499  T
Q  250 aacatgttacttttggtttccttaaccattgcc 282  Q
    |||||| ||||||||  ||||||||||||||||    
T  12191498 aacatgctacttttgccttccttaaccattgcc 12191466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 138 - 284
Target Start/End: Complemental strand, 5578392 - 5578245
Alignment:
Q  138 attgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||||||||| | |||||||| ||||||||||| |||||| ||||||||| |||||  | | || |||||||||||||||||||||||| ||||| ||||    
T  5578392 attgcccttgaggcattggatgaggggataaaaatagaaatatagcattgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgt 5578293  T
Q  237 tgaaactaatgcaaacatgttacttttggtttccttaaccattgccct 284  Q
    |||||| |||||||||||| ||||||||  ||||||||||||||||||    
T  5578292 tgaaacaaatgcaaacatgctacttttgacttccttaaccattgccct 5578245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 125 - 290
Target Start/End: Original strand, 26572060 - 26572221
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| || ||||| ||||| | |||||||||||||||||||| |||||| ||||     ||||||| |||||||||||||||||||  ||||||||    
T  26572060 gagaatgctaaccattgtccttggggcattggataaggggataaaaatagaaatatag-----gaaaatgataaaaagtgataaatttaatattttaaaa 26572154  T
Q  224 gttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    |||||||| ||||| |||| |||||||||||| ||||||||  |||||||||||||||||| |||||    
T  26572155 gttaaaatattgttaaaaccaatgcaaacatgctacttttgacttccttaaccattgccctgagggc 26572221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 7880448 - 7880564
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| |||||||||     
T  7880448 aaaatagaaatatagcattagaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttggc 7880547  T
Q  267 ttccttaaccattgccc 283  Q
    |||||||| ||||||||    
T  7880548 ttccttaatcattgccc 7880564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 16437567 - 16437726
Alignment:
Q  124 agagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaa 222  Q
    ||||||||| || |||||| |||  | ||||||||||| |||||||| |||||| ||| |||||||||||||| ||||        ||||||||||||||    
T  16437567 agagaatgctaaccattgctcttaaggcattggataagtggataaaaatagaaatataacattggaaaatggtgaaaa--------tttaactttttaaa 16437658  T
Q  223 agttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccctcagggc 290  Q
    ||| ||||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  16437659 agtaaaaatattgttgaaaccaatgcaaacatgctactgttggtttccttaaccattgccctcagggc 16437726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 6867020 - 6866915
Alignment:
Q  151 cattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||||||||||||||||| || ||| |||||||| ||||||||| |||||||||||||||||| |||||||||| |||||||||||||||  ||||||    
T  6867020 cattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaaatcaatgca 6866921  T
Q  250 aacatg 255  Q
    ||||||    
T  6866920 aacatg 6866915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 8324125 - 8324248
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| |||||||||  |||| || |||| |||||||||||||||||||||| |||||||||||||||||| |||  |||||||||| ||||       
T  8324125 aaaatagaaacatagcattgagaaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaccaatataaacatgttatttttacc 8324224  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    |||||||||||||| ||| |||||    
T  8324225 ttccttaaccattgtcctgagggc 8324248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 31220369 - 31220455
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||   |||||||||||  ||||||||||||||||||    
T  31220369 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataaaatgcaaacatactacttttggtttccttaa 31220455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 32786110 - 32786041
Alignment:
Q  214 ctttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgccc 283  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  32786110 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgccc 32786041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 29692319 - 29692427
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaa 223  Q
    |||||||| |||||||||||||| | ||||||||||  |||||||| |||||| |||| |||| |||||||| ||||||||||||||||||||||||| |    
T  29692319 gagaatgctaatcattgcccttggggcattggataaatggataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaga 29692418  T
Q  224 gttaaaatg 232  Q
    || ||||||    
T  29692419 gtcaaaatg 29692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 21186059 - 21186145
Alignment:
Q  188 aaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaa 274  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||||  || |||||||| |||||||||    
T  21186059 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatgcaaaattgctacttttgatttccttaa 21186145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 280
Target Start/End: Complemental strand, 12175647 - 12175535
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||| ||| |||| |||| |||||| |||||| ||||||||||||||||||||||||||||| ||| || |||| |||||||||||  |||||||       
T  12175647 aaaatataaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa-gttattaaaaccaatgcaaacatactacttttaag 12175549  T
Q  267 ttccttaaccattg 280  Q
    ||||||||||||||    
T  12175548 ttccttaaccattg 12175535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 212
Target Start/End: Complemental strand, 32786346 - 32786259
Alignment:
Q  125 gagaatgccaatcattgcccttgtgacattggataaggggataaaatagaaagatagcattggaaaatggtaaaaagtgataaattta 212  Q
    |||||||| || ||||||||||| |  ||||||||||||   |||||||||| ||| |||||||||||||| ||||| ||||||||||    
T  32786346 gagaatgctaaccattgcccttggggtattggataagggataaaaatagaaatataacattggaaaatggtgaaaagagataaattta 32786259  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 34780023 - 34780112
Alignment:
Q  191 atggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattg 280  Q
    ||||| ||||||||  ||||||||||||||||||||||||  ||||||||   |||| ||| ||  |||||||| |||||||||||||||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattg 34780112  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 28014740 - 28014638
Alignment:
Q  151 cattggataaggggataaaat-agaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgca 249  Q
    |||||| |||| || |||||| ||||| || | ||||| ||||||| |||| |||| | ||| ||||||||||||||||||| |||||||| | ||||||    
T  28014740 cattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatgca 28014641  T
Q  250 aac 252  Q
    |||    
T  28014640 aac 28014638  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 1947476 - 1947424
Alignment:
Q  184 ttggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgt 236  Q
    |||||||||||||||||||| |||||| |||||| ||||||| |||| |||||    
T  1947476 ttggaaaatggtaaaaagtgttaaattcaactttctaaaagtcaaaaagttgt 1947424  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 12226352 - 12226475
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | ||||  ||||| | ||||||||  ||||||||||||| ||||| ||||  ||||||||   |||| ||| ||  || |||||||    
T  12226352 aaaatagaaacattgtattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattcaatgtaaatatactatttttggt 12226451  T
Q  267 ttccttaaccattgccctcagggc 290  Q
    |||||||||||||| ||| |||||    
T  12226452 ttccttaaccattgtcctgagggc 12226475  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 19645995 - 19645941
Alignment:
Q  257 tacttttggtttccttaaccattgccctcagggctgaggacaatggttagcaagacccaaaa 318  Q
    ||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||    
T  19645995 tacttttagtttccttaaccattgccct-------gaggacaatggttagcaagacccaaaa 19645941  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 29964349 - 29964274
Alignment:
Q  207 aatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaaccattgcc 282  Q
    ||||||||||||||||||| ||||  ||||||||   |||| ||| || ||| |||||| ||||||||||||||||    
T  29964349 aatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaaccattgcc 29964274  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 5029489 - 5029546
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||| |||||||||||| ||  | |||||||||||||||||||||||||  |||||||    
T  5029489 attgaaaaatggtaaaatgttgtgaatttaactttttaaaagttaaaatagtgttgaa 5029546  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 27127528 - 27127601
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 240  Q
    |||||||||| || | ||||  ||||||| |||| |||| ||||||||||||||||||| || || ||||||||    
T  27127528 aaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaa 27127601  T

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Target: scaffold0002 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 392164 - 392261
Alignment:
Q  178 atagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||| | |||||||||    
T  392164 atagcattgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccgatgcaaacatgctacttttcgcttccttaac 392261  T

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Target: scaffold0809 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 4705 - 4764
Alignment:
Q  205 taaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttg 264  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||    
T  4705 taaatttaactttttaaaagtcaatatgttgttgaaattaatgcaaacatgctacttttg 4764  T

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Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 4249 - 4337
Alignment:
Q  126 agaatgccaatcattgcccttgtgacattggataaggggataaaa-tagaaagatagcattggaaaatggtaaaaagtgataaatttaa 213  Q
    ||||||| |||||||||  ||| |||||||||||  ||||||||| || ||| ||||||||||||||| || |||||||||||||||||    
T  4249 agaatgctaatcattgcttttgggacattggatagagggataaaaataaaaatatagcattggaaaattgtgaaaagtgataaatttaa 4337  T

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Target: scaffold0144 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 39675 - 39553
Alignment:
Q  167 aaaatagaaagatagcattggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggt 266  Q
    |||||||||| || | |||||||||| || |||| |||  ||||||||||||||||||| || ||  |||||||   |||| ||| ||  ||||||||||    
T  39675 aaaatagaaacattgtattggaaaatagtgaaaactgaagaatttaactttttaaaagtcaacat--tgttgaattcaatgtaaatatactacttttggt 39578  T
Q  267 ttccttaaccattgccctcagggct 291  Q
    |||||||||||||||||| ||||||    
T  39577 ttccttaaccattgccctgagggct 39553  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 37430 - 37507
Alignment:
Q  197 aaaagtgataaatttaactttttaaaagttaaaatgttgttgaaactaatgcaaacatgttacttttggtttccttaac 275  Q
    |||| |||| |||||||||||| |||||| |||||||| ||||| | ||||| |||||  |||||||| ||||||||||    
T  37430 aaaaatgatgaatttaacttttcaaaagtcaaaatgttattgaatccaatgc-aacattctacttttgatttccttaac 37507  T

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Target: scaffold2122 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 655 - 711
Alignment:
Q  183 attggaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttga 239  Q
    ||||||||||||| ||||||  | |||| |||||||||||||||||||  |||||||    
T  655 attggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttga 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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