View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11758_low_2 (Length: 1108)

Name: NF11758_low_2
Description: NF11758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11758_low_2
NF11758_low_2
[»] chr5 (52 HSPs)
chr5 (454-687)||(19931829-19932061)
chr5 (454-690)||(19924878-19925113)
chr5 (886-1101)||(19133611-19133823)
chr5 (454-670)||(19922147-19922363)
chr5 (226-421)||(36950150-36950345)
chr5 (884-1101)||(28402521-28402734)
chr5 (221-418)||(22729762-22729959)
chr5 (210-421)||(43097372-43097583)
chr5 (226-421)||(35941136-35941324)
chr5 (942-1101)||(19931480-19931635)
chr5 (226-401)||(11339771-11339946)
chr5 (553-689)||(16365722-16365861)
chr5 (456-689)||(8544600-8544828)
chr5 (276-421)||(10491122-10491267)
chr5 (471-599)||(19133339-19133467)
chr5 (553-683)||(32717938-32718072)
chr5 (456-687)||(39614825-39615064)
chr5 (471-690)||(1583449-1583666)
chr5 (554-689)||(12436695-12436829)
chr5 (481-690)||(17201216-17201437)
chr5 (578-667)||(14654940-14655030)
chr5 (553-654)||(43346632-43346733)
chr5 (594-690)||(17202828-17202925)
chr5 (630-690)||(19803648-19803708)
chr5 (466-688)||(36437221-36437438)
chr5 (594-689)||(11992218-11992314)
chr5 (630-690)||(36246322-36246382)
chr5 (631-690)||(17557946-17558005)
chr5 (635-690)||(28619979-28620034)
chr5 (610-667)||(1590162-1590219)
chr5 (578-683)||(20201629-20201739)
chr5 (630-690)||(17591636-17591696)
chr5 (454-653)||(18413229-18413426)
chr5 (575-690)||(32474167-32474282)
chr5 (454-638)||(42673940-42674126)
chr5 (17-83)||(11340068-11340134)
chr5 (610-676)||(36194039-36194105)
chr5 (612-684)||(13220055-13220127)
chr5 (553-597)||(20201746-20201790)
chr5 (456-599)||(249385-249523)
chr5 (553-600)||(17202349-17202396)
chr5 (480-640)||(6428276-6428435)
chr5 (553-599)||(11992149-11992195)
chr5 (561-595)||(14655039-14655073)
chr5 (757-795)||(19931721-19931759)
chr5 (555-597)||(36060155-36060197)
chr5 (554-599)||(37269581-37269626)
chr5 (614-654)||(11825454-11825494)
chr5 (557-597)||(32474281-32474321)
chr5 (615-687)||(39585777-39585851)
chr5 (757-794)||(19924774-19924811)
chr5 (645-690)||(42674141-42674186)
[»] scaffold0502 (4 HSPs)
scaffold0502 (210-421)||(8863-9074)
scaffold0502 (210-384)||(4200-4374)
scaffold0502 (17-65)||(4497-4545)
scaffold0502 (17-65)||(9197-9245)
[»] chr6 (45 HSPs)
chr6 (210-421)||(18338039-18338250)
chr6 (221-420)||(23848582-23848781)
chr6 (210-421)||(9972700-9972911)
chr6 (210-397)||(32932316-32932503)
chr6 (210-413)||(7553418-7553620)
chr6 (221-421)||(22958096-22958286)
chr6 (221-421)||(23830106-23830296)
chr6 (553-690)||(7972594-7972732)
chr6 (210-320)||(27101529-27101639)
chr6 (210-320)||(27143351-27143461)
chr6 (553-684)||(4665874-4666013)
chr6 (467-677)||(34889064-34889279)
chr6 (226-318)||(19543490-19543582)
chr6 (578-688)||(6111110-6111221)
chr6 (560-689)||(8049170-8049301)
chr6 (456-687)||(23410476-23410709)
chr6 (605-690)||(9095783-9095869)
chr6 (466-599)||(6110973-6111107)
chr6 (274-415)||(15121589-15121730)
chr6 (576-690)||(2437820-2437935)
chr6 (578-690)||(21527311-21527424)
chr6 (553-690)||(25056480-25056630)
chr6 (473-597)||(21527179-21527304)
chr6 (610-683)||(4122778-4122851)
chr6 (604-685)||(14093799-14093881)
chr6 (18-87)||(28498191-28498260)
chr6 (18-87)||(29810602-29810671)
chr6 (466-599)||(8460941-8461077)
chr6 (553-684)||(4184685-4184809)
chr6 (553-593)||(9095704-9095744)
chr6 (454-589)||(34259663-34259795)
chr6 (642-689)||(26252669-26252716)
chr6 (367-421)||(19543424-19543478)
chr6 (615-690)||(6396629-6396705)
chr6 (365-421)||(27101459-27101515)
chr6 (365-421)||(27143281-27143337)
chr6 (466-521)||(8049337-8049392)
chr6 (586-654)||(26252586-26252655)
chr6 (17-65)||(18338373-18338421)
chr6 (473-524)||(14093646-14093697)
chr6 (631-690)||(21014257-21014316)
chr6 (19-65)||(7553245-7553291)
chr6 (614-660)||(9353140-9353186)
chr6 (471-512)||(2437702-2437743)
chr6 (472-525)||(25056656-25056708)
[»] chr4 (77 HSPs)
chr4 (149-421)||(36048816-36049088)
chr4 (149-421)||(2228783-2229055)
chr4 (210-421)||(6262131-6262342)
chr4 (210-421)||(35904991-35905202)
chr4 (210-421)||(42567648-42567859)
chr4 (149-421)||(13393617-13393890)
chr4 (149-421)||(13396756-13397029)
chr4 (221-421)||(33366681-33366884)
chr4 (221-421)||(18891118-18891318)
chr4 (226-421)||(24423223-24423417)
chr4 (259-421)||(54256170-54256330)
chr4 (239-421)||(33361565-33361747)
chr4 (216-377)||(44160727-44160887)
chr4 (553-690)||(45635409-45635551)
chr4 (553-680)||(50720899-50721029)
chr4 (553-690)||(34031959-34032096)
chr4 (553-683)||(37209938-37210076)
chr4 (553-690)||(9089574-9089713)
chr4 (553-659)||(33889622-33889729)
chr4 (474-689)||(54982634-54982852)
chr4 (578-690)||(24538291-24538403)
chr4 (560-654)||(667994-668090)
chr4 (553-683)||(38840372-38840508)
chr4 (466-660)||(2492863-2493059)
chr4 (468-667)||(25493838-25494046)
chr4 (594-683)||(25490459-25490549)
chr4 (629-686)||(6949085-6949142)
chr4 (578-690)||(46195736-46195849)
chr4 (611-683)||(24074131-24074203)
chr4 (310-421)||(43444831-43444942)
chr4 (323-413)||(18888167-18888257)
chr4 (586-690)||(37371399-37371503)
chr4 (610-683)||(38434254-38434327)
chr4 (633-689)||(45666290-45666346)
chr4 (605-690)||(23529504-23529591)
chr4 (553-599)||(19443506-19443552)
chr4 (553-599)||(41502639-41502685)
chr4 (568-688)||(46016561-46016684)
chr4 (610-690)||(21956497-21956577)
chr4 (456-667)||(49263009-49263217)
chr4 (631-690)||(21342249-21342308)
chr4 (553-600)||(46195850-46195897)
chr4 (470-652)||(47944335-47944516)
chr4 (553-599)||(1821528-1821574)
chr4 (578-687)||(19443555-19443665)
chr4 (619-688)||(27650852-27650924)
chr4 (581-667)||(38044911-38044997)
chr4 (604-688)||(30913525-30913609)
chr4 (19-68)||(33367024-33367073)
chr4 (620-684)||(46196822-46196887)
chr4 (471-596)||(53370249-53370375)
chr4 (553-597)||(24538240-24538284)
chr4 (557-597)||(37371344-37371384)
chr4 (614-690)||(38045402-38045478)
chr4 (471-535)||(45666471-45666535)
chr4 (553-597)||(55343848-55343892)
chr4 (557-599)||(49299804-49299846)
chr4 (456-525)||(24073999-24074068)
chr4 (604-688)||(30912627-30912717)
chr4 (473-538)||(38434100-38434165)
chr4 (610-690)||(49299879-49299960)
chr4 (553-597)||(6949218-6949262)
chr4 (477-525)||(19443432-19443480)
chr4 (473-525)||(24538162-24538214)
chr4 (610-666)||(33808887-33808943)
chr4 (610-654)||(41502564-41502608)
chr4 (470-521)||(1821447-1821498)
chr4 (466-525)||(6949284-6949343)
chr4 (25-68)||(33361879-33361922)
chr4 (17-68)||(42567465-42567516)
chr4 (629-688)||(46250033-46250092)
chr4 (210-257)||(54256348-54256395)
chr4 (466-536)||(38044764-38044834)
chr4 (553-599)||(53393431-53393477)
chr4 (630-683)||(20782465-20782518)
chr4 (17-70)||(44160536-44160589)
chr4 (553-598)||(45666411-45666456)
[»] chr3 (76 HSPs)
chr3 (210-421)||(39032746-39032956)
chr3 (221-417)||(29960935-29961131)
chr3 (221-417)||(30010140-30010336)
chr3 (221-421)||(32280786-32280986)
chr3 (210-421)||(3469778-3469989)
chr3 (210-421)||(19240517-19240728)
chr3 (210-421)||(31112306-31112517)
chr3 (210-421)||(32285719-32285930)
chr3 (226-421)||(39039775-39039968)
chr3 (210-421)||(41272891-41273102)
chr3 (227-421)||(45677907-45678101)
chr3 (229-377)||(10626311-10626459)
chr3 (226-421)||(38445572-38445767)
chr3 (149-366)||(46611799-46612016)
chr3 (281-421)||(11172085-11172225)
chr3 (232-421)||(50158101-50158290)
chr3 (210-341)||(11458138-11458269)
chr3 (456-690)||(20841309-20841539)
chr3 (455-690)||(5493541-5493779)
chr3 (573-689)||(19578321-19578440)
chr3 (553-689)||(45646589-45646730)
chr3 (470-690)||(2093764-2093993)
chr3 (553-688)||(34668672-34668809)
chr3 (473-687)||(37030853-37031061)
chr3 (471-599)||(296539-296666)
chr3 (456-683)||(15638347-15638575)
chr3 (578-690)||(25841918-25842031)
chr3 (561-683)||(54675151-54675271)
chr3 (466-645)||(3751492-3751681)
chr3 (553-652)||(44940825-44940926)
chr3 (454-684)||(375740-375971)
chr3 (578-690)||(9588733-9588847)
chr3 (604-688)||(633294-633379)
chr3 (605-689)||(25342389-25342474)
chr3 (610-683)||(45759970-45760043)
chr3 (473-597)||(21959582-21959707)
chr3 (629-684)||(27264107-27264162)
chr3 (575-681)||(20140992-20141098)
chr3 (553-684)||(2440613-2440741)
chr3 (604-690)||(296422-296510)
chr3 (615-690)||(1272414-1272489)
chr3 (457-600)||(9588848-9588992)
chr3 (610-681)||(23272051-23272122)
chr3 (630-689)||(27817406-27817464)
chr3 (614-684)||(19234012-19234082)
chr3 (456-592)||(38750952-38751086)
chr3 (614-667)||(7259726-7259779)
chr3 (609-690)||(21959699-21959779)
chr3 (210-271)||(39350935-39350996)
chr3 (553-597)||(7259646-7259690)
chr3 (470-525)||(27817596-27817651)
chr3 (471-593)||(6512437-6512560)
chr3 (585-654)||(21934474-21934544)
chr3 (553-652)||(23701901-23702005)
chr3 (470-524)||(45667607-45667661)
chr3 (629-690)||(10614588-10614649)
chr3 (345-421)||(11457260-11457334)
chr3 (610-683)||(29556519-29556592)
chr3 (629-689)||(1405216-1405276)
chr3 (553-652)||(23720356-23720461)
chr3 (553-652)||(23738812-23738917)
chr3 (553-660)||(23772197-23772312)
chr3 (557-597)||(25841871-25841911)
chr3 (456-525)||(21934392-21934458)
chr3 (558-667)||(45667467-45667578)
chr3 (466-591)||(45759798-45759921)
chr3 (553-599)||(2599141-2599187)
chr3 (557-667)||(16237552-16237662)
chr3 (471-524)||(6472605-6472658)
chr3 (471-524)||(6749145-6749198)
chr3 (610-683)||(19187682-19187755)
chr3 (17-65)||(45677709-45677757)
chr3 (610-648)||(25479619-25479657)
chr3 (614-648)||(25485838-25485872)
chr3 (471-521)||(42735487-42735537)
chr3 (456-527)||(21915603-21915671)
[»] chr1 (47 HSPs)
chr1 (210-420)||(39574422-39574632)
chr1 (221-421)||(24515367-24515564)
chr1 (211-421)||(41140800-41141010)
chr1 (221-421)||(9764989-9765189)
chr1 (221-421)||(47858034-47858234)
chr1 (210-370)||(9758363-9758523)
chr1 (454-690)||(1674623-1674867)
chr1 (210-377)||(12017733-12017899)
chr1 (553-690)||(2655702-2655844)
chr1 (553-689)||(36319926-36320067)
chr1 (226-327)||(39581064-39581165)
chr1 (276-370)||(24523172-24523266)
chr1 (557-690)||(13254723-13254858)
chr1 (331-421)||(39580437-39580527)
chr1 (585-684)||(788278-788378)
chr1 (454-683)||(31622959-31623203)
chr1 (553-654)||(52414965-52415068)
chr1 (610-688)||(43021124-43021202)
chr1 (578-690)||(11238231-11238344)
chr1 (553-654)||(32769020-32769124)
chr1 (553-690)||(6295707-6295846)
chr1 (583-681)||(10430513-10430612)
chr1 (570-690)||(3901011-3901130)
chr1 (570-690)||(50488740-50488859)
chr1 (553-690)||(39386684-39386821)
chr1 (553-654)||(4671443-4671546)
chr1 (471-599)||(19269818-19269946)
chr1 (454-521)||(4395910-4395977)
chr1 (594-683)||(10101673-10101762)
chr1 (553-599)||(23699362-23699408)
chr1 (331-421)||(47854650-47854740)
chr1 (553-594)||(788219-788260)
chr1 (629-690)||(23698753-23698814)
chr1 (295-363)||(38278914-38278983)
chr1 (586-654)||(40519193-40519262)
chr1 (467-536)||(41116658-41116727)
chr1 (619-667)||(21535845-21535893)
chr1 (456-525)||(40519077-40519143)
chr1 (604-653)||(23699440-23699490)
chr1 (611-688)||(39157049-39157127)
chr1 (642-687)||(23699505-23699550)
chr1 (591-654)||(30280062-30280126)
chr1 (17-68)||(47858375-47858426)
chr1 (553-597)||(23697667-23697713)
chr1 (592-645)||(39157128-39157182)
chr1 (610-684)||(52281713-52281787)
chr1 (629-690)||(21967195-21967256)
[»] chr7 (57 HSPs)
chr7 (221-421)||(267756-267956)
chr7 (210-421)||(48853526-48853737)
chr7 (210-421)||(32517044-32517255)
chr7 (210-421)||(26450921-26451128)
chr7 (226-421)||(278838-279023)
chr7 (182-421)||(40771614-40771851)
chr7 (216-376)||(29148723-29148882)
chr7 (455-684)||(35792972-35793203)
chr7 (216-377)||(5172840-5173001)
chr7 (454-683)||(16196781-16197011)
chr7 (553-690)||(4962890-4963035)
chr7 (553-683)||(10534969-10535100)
chr7 (466-687)||(4567307-4567526)
chr7 (288-421)||(40771166-40771297)
chr7 (553-690)||(8614790-8614927)
chr7 (561-690)||(28226536-28226667)
chr7 (556-690)||(37124162-37124299)
chr7 (553-684)||(25290614-25290753)
chr7 (575-688)||(2273495-2273609)
chr7 (561-690)||(36412806-36412934)
chr7 (578-690)||(39430587-39430700)
chr7 (604-690)||(15643323-15643410)
chr7 (466-597)||(15643444-15643576)
chr7 (586-690)||(2798594-2798698)
chr7 (578-690)||(24394211-24394324)
chr7 (586-690)||(41747201-41747304)
chr7 (578-682)||(43368781-43368883)
chr7 (578-683)||(7809181-7809287)
chr7 (604-690)||(14735067-14735152)
chr7 (594-690)||(39617532-39617625)
chr7 (473-597)||(14771289-14771414)
chr7 (473-597)||(15221741-15221866)
chr7 (578-690)||(3835651-3835763)
chr7 (631-690)||(14771449-14771508)
chr7 (631-690)||(15221901-15221960)
chr7 (456-536)||(17269658-17269739)
chr7 (561-678)||(39599661-39599777)
chr7 (553-597)||(46671971-46672015)
chr7 (582-647)||(4678434-4678500)
chr7 (617-667)||(10026242-10026292)
chr7 (553-598)||(3835604-3835649)
chr7 (553-598)||(12394233-12394278)
chr7 (629-690)||(44550019-44550080)
chr7 (553-597)||(24394160-24394204)
chr7 (27-83)||(26450759-26450815)
chr7 (20-68)||(48853867-48853915)
chr7 (470-525)||(27723468-27723523)
chr7 (456-525)||(39427544-39427610)
chr7 (610-688)||(27723280-27723358)
chr7 (473-543)||(39432757-39432827)
chr7 (610-667)||(39432603-39432660)
chr7 (629-684)||(39247328-39247382)
chr7 (656-690)||(2271947-2271981)
chr7 (456-522)||(37124331-37124397)
chr7 (561-599)||(43368886-43368924)
chr7 (17-66)||(267565-267614)
chr7 (591-654)||(39427425-39427490)
[»] chr2 (76 HSPs)
chr2 (220-421)||(40113335-40113538)
chr2 (216-421)||(3949927-3950132)
chr2 (161-421)||(18341524-18341784)
chr2 (226-421)||(23888414-23888609)
chr2 (226-421)||(23892490-23892685)
chr2 (210-421)||(24138311-24138522)
chr2 (175-421)||(39190035-39190279)
chr2 (221-421)||(669939-670139)
chr2 (210-388)||(41826523-41826695)
chr2 (221-364)||(15144277-15144420)
chr2 (226-377)||(662751-662902)
chr2 (226-380)||(25336147-25336300)
chr2 (456-689)||(44898101-44898340)
chr2 (229-419)||(17527331-17527524)
chr2 (210-333)||(14661277-14661400)
chr2 (454-690)||(15507440-15507685)
chr2 (454-690)||(21252570-21252806)
chr2 (454-676)||(41541048-41541278)
chr2 (210-350)||(17530028-17530171)
chr2 (466-683)||(33659699-33659920)
chr2 (553-681)||(20171400-20171530)
chr2 (454-686)||(45273277-45273511)
chr2 (561-687)||(1770148-1770276)
chr2 (480-599)||(157953-158073)
chr2 (578-687)||(158078-158188)
chr2 (604-684)||(4316693-4316774)
chr2 (553-684)||(16806513-16806645)
chr2 (553-684)||(16845794-16845926)
chr2 (249-420)||(33425851-33426021)
chr2 (610-690)||(150299-150377)
chr2 (604-684)||(36244049-36244130)
chr2 (610-690)||(42756780-42756860)
chr2 (581-687)||(4700951-4701058)
chr2 (578-684)||(11083898-11084004)
chr2 (456-592)||(11084013-11084148)
chr2 (614-689)||(32113378-32113453)
chr2 (553-689)||(38589259-38589400)
chr2 (614-684)||(33659553-33659623)
chr2 (578-690)||(4959369-4959481)
chr2 (578-654)||(7486303-7486380)
chr2 (578-690)||(25965860-25965973)
chr2 (470-600)||(29408647-29408775)
chr2 (610-683)||(42872273-42872345)
chr2 (553-597)||(25965813-25965857)
chr2 (610-690)||(27746457-27746537)
chr2 (591-690)||(20891305-20891402)
chr2 (553-596)||(27746578-27746621)
chr2 (553-597)||(34424712-34424756)
chr2 (456-584)||(42872123-42872252)
chr2 (466-521)||(36243896-36243951)
chr2 (20-79)||(39190350-39190409)
chr2 (553-599)||(1397560-1397606)
chr2 (253-327)||(4840581-4840654)
chr2 (466-597)||(7486171-7486297)
chr2 (629-690)||(11073996-11074055)
chr2 (610-684)||(29882186-29882260)
chr2 (586-683)||(34424771-34424869)
chr2 (454-543)||(33024397-33024486)
chr2 (560-597)||(42756900-42756937)
chr2 (610-690)||(3309858-3309937)
chr2 (553-597)||(12411760-12411804)
chr2 (553-597)||(12423820-12423864)
chr2 (604-667)||(29408804-29408868)
chr2 (149-195)||(4840508-4840554)
chr2 (561-599)||(43042994-43043032)
chr2 (553-598)||(4316796-4316841)
chr2 (19-68)||(14661530-14661578)
chr2 (557-597)||(4959322-4959362)
chr2 (470-525)||(1397632-1397687)
chr2 (604-647)||(2218236-2218279)
chr2 (473-544)||(12412755-12412826)
chr2 (473-544)||(12424815-12424886)
chr2 (358-421)||(14661214-14661277)
chr2 (610-683)||(13140909-13140981)
chr2 (27-68)||(24138652-24138693)
chr2 (17-58)||(25336420-25336461)
[»] chr8 (65 HSPs)
chr8 (210-421)||(32038108-32038319)
chr8 (226-421)||(44626049-44626244)
chr8 (226-421)||(1262246-1262441)
chr8 (221-421)||(26005551-26005751)
chr8 (210-421)||(45266134-45266332)
chr8 (27-363)||(39517326-39517663)
chr8 (211-340)||(17497514-17497643)
chr8 (276-401)||(18324740-18324865)
chr8 (221-415)||(38143818-38144006)
chr8 (225-325)||(34548111-34548210)
chr8 (557-684)||(32233624-32233754)
chr8 (553-690)||(1530552-1530689)
chr8 (554-689)||(27231764-27231905)
chr8 (456-659)||(29315731-29315934)
chr8 (554-690)||(39628238-39628385)
chr8 (554-690)||(39637788-39637935)
chr8 (554-678)||(9455236-9455367)
chr8 (456-690)||(25496639-25496874)
chr8 (471-667)||(34038904-34039100)
chr8 (456-690)||(25400460-25400694)
chr8 (610-684)||(14896625-14896699)
chr8 (586-690)||(34146173-34146279)
chr8 (473-597)||(3443579-3443704)
chr8 (610-690)||(7578222-7578302)
chr8 (610-690)||(7695309-7695389)
chr8 (604-683)||(16599385-16599465)
chr8 (570-683)||(40557208-40557319)
chr8 (561-683)||(41411430-41411551)
chr8 (305-376)||(45272805-45272876)
chr8 (553-667)||(16393717-16393834)
chr8 (149-263)||(18324933-18325047)
chr8 (578-682)||(3443711-3443816)
chr8 (564-683)||(38401563-38401684)
chr8 (456-592)||(1358750-1358887)
chr8 (610-673)||(5870762-5870825)
chr8 (554-684)||(1256683-1256817)
chr8 (586-667)||(2742927-2743009)
chr8 (466-536)||(5870920-5870990)
chr8 (594-690)||(4418560-4418656)
chr8 (624-683)||(30887894-30887952)
chr8 (578-667)||(38457284-38457375)
chr8 (17-63)||(32037927-32037973)
chr8 (610-687)||(43026704-43026782)
chr8 (467-524)||(7695142-7695199)
chr8 (554-599)||(34146289-34146334)
chr8 (356-421)||(34548212-34548277)
chr8 (557-596)||(3741743-3741782)
chr8 (642-688)||(3741601-3741647)
chr8 (586-659)||(3741656-3741730)
chr8 (471-525)||(11087287-11087341)
chr8 (19-65)||(38144160-38144206)
chr8 (19-65)||(38151220-38151266)
chr8 (629-690)||(1358944-1359005)
chr8 (560-597)||(7578144-7578181)
chr8 (477-599)||(30887739-30887859)
chr8 (17-65)||(44626385-44626433)
chr8 (474-525)||(34146361-34146412)
chr8 (210-261)||(38151014-38151065)
chr8 (629-684)||(44666218-44666273)
chr8 (606-660)||(45083036-45083091)
chr8 (553-687)||(11087120-11087261)
chr8 (470-524)||(16393861-16393915)
chr8 (383-421)||(17497646-17497684)
chr8 (586-659)||(36682579-36682652)
chr8 (466-536)||(38457442-38457512)
[»] scaffold0045 (1 HSPs)
scaffold0045 (157-421)||(30009-30273)
[»] scaffold0062 (1 HSPs)
scaffold0062 (17-421)||(39961-40356)
[»] scaffold0040 (2 HSPs)
scaffold0040 (210-421)||(67701-67912)
scaffold0040 (210-421)||(60225-60436)
[»] scaffold1634 (1 HSPs)
scaffold1634 (216-421)||(36-241)
[»] scaffold0027 (1 HSPs)
scaffold0027 (149-421)||(134490-134761)
[»] scaffold1130 (1 HSPs)
scaffold1130 (480-690)||(375-584)
[»] scaffold0006 (1 HSPs)
scaffold0006 (496-667)||(46481-46651)
[»] scaffold0005 (2 HSPs)
scaffold0005 (553-688)||(256736-256871)
scaffold0005 (553-594)||(272310-272351)
[»] scaffold0118 (1 HSPs)
scaffold0118 (594-690)||(14909-15005)
[»] scaffold1327 (1 HSPs)
scaffold1327 (629-689)||(862-922)
[»] scaffold0188 (2 HSPs)
scaffold0188 (480-545)||(6296-6361)
scaffold0188 (604-684)||(6402-6483)
[»] scaffold1801 (1 HSPs)
scaffold1801 (553-638)||(1236-1323)
[»] scaffold1986 (1 HSPs)
scaffold1986 (466-512)||(322-368)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 1e-87; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 454 - 687
Target Start/End: Complemental strand, 19932061 - 19931829
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| |       |    
T  19932061 tatgttcttttcctttacacttgaaatttttaacaattactgctcatcttatttatagagttttaactcttcattgaaccattattataggtaaaaaaat 19931962  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataag 653  Q
    | || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19931961 t-gtctaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttagttttcaaatatataacatgaattagttttattgaaaaagataag 19931863  T
Q  654 aataattgacaaatggtataattgacaaatcgta 687  Q
    |||||||||||||| |||||| ||||||||||||    
T  19931862 aataattgacaaatagtataactgacaaatcgta 19931829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 454 - 690
Target Start/End: Complemental strand, 19925113 - 19924878
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||||||||| |||||||||||||||| ||            
T  19925113 tatgttcttttcctttacacttgaaatttttaacaattactgatcatcttattcatagagttttaactcttcattgaaccattattataaataaaaaaaa 19925014  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataag 653  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19925013 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttagttttcaaatatataacatgaattagttttattgaaaaagataag 19924914  T
Q  654 aataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||||||||||| | |||||||||||||    
T  19924913 aataattgacaaatggtataact-acaaatcgtaccc 19924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 886 - 1101
Target Start/End: Original strand, 19133611 - 19133823
Alignment:
Q  886 gtatctcccaatgatattttatctcaattcttaataaattcaaatctaaatatatctagacataatattttgatccctcccagttctttttggccagctt 985  Q
    |||| |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||| |||||||   |||||||||    
T  19133611 gtatatcccaatgatattttatctcaattcttagtagattcatatctaaatatatctagacataatattttgaaccctcctagttctt---ggccagctt 19133707  T
Q  986 caatacctagctagagttcaaggtattaaccatcgcatttattttggcagttcggtggttcttcaccttcgttaaaaagaaaggcactttttcacttgcg 1085  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  19133708 caacacctagctagggttcaaggtattaaccatcgcatttattttggcagttcggtggttcttcaccttcgttaaaaagaaaggcactttttcatttgca 19133807  T
Q  1086 ccttcattctctgctt 1101  Q
    ||||||||||||||||    
T  19133808 ccttcattctctgctt 19133823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 454 - 670
Target Start/End: Complemental strand, 19922363 - 19922147
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||            
T  19922363 tatgttcttttcctttacacttgaaatttttaacaattactgatcatcttatttatagagttttaactcttcattgaaccattattatagataaaaaaaa 19922264  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataag 653  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19922263 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacaaactttagttttcaaatatataacatgaattagttttattgaaaaagataag 19922164  T
Q  654 aataattgacaaatggt 670  Q
    ||||| |||||||||||    
T  19922163 aataactgacaaatggt 19922147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 36950150 - 36950345
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36950150 atgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccatttataaagaatagctcaat 36950249  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  36950250 cacacatattcatcaactaattagtgcttaacacaataaaccataatttatattatgacattaacttataataattgattattgtcaatccataat 36950345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 884 - 1101
Target Start/End: Complemental strand, 28402734 - 28402521
Alignment:
Q  884 tagtatctcccaatgatattttatctcaattcttaataaattcaaatctaaatatatctagacataatattttgatccctcccagttctttttggccagc 983  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  28402734 tagtatctcccaatgatattttatctcgattcataataaattaaaatctaaatatacctagacataatattttgaaccctcccagttctttatggccagc 28402635  T
Q  984 ttcaatacctagctagagttcaaggtattaaccatcgcatttattttggcagttcggtggttcttcaccttcgttaaaaagaaaggcactttttcacttg 1083  Q
    ||||||||    || | ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28402634 ttcaatac----cttgggttcaaggtattaaccatcacgtttattttagcagttcggtggttcttcaccttcgttaaaaagaaaggcactttttcacttg 28402539  T
Q  1084 cgccttcattctctgctt 1101  Q
    | ||||||||||||||||    
T  28402538 caccttcattctctgctt 28402521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 221 - 418
Target Start/End: Complemental strand, 22729959 - 22729762
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||     
T  22729959 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattggacttagctaaatggtccaacccatcacagtccatttagaaagaatagc 22729860  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccat 418  Q
     | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||| |||||||||    
T  22729859 ccgatcacacatattcatcaactaattagtgcttaacacaatagatcataatttatattatgacattaacttataataattgattattgtcaatccat 22729762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 43097583 - 43097372
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||    
T  43097583 ttaaccgtctgatgggatgacatttaaatagctaaacggctgagggcagggacctttcattgggcttagctaaatggtccaactcatcacggttcattta 43097484  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
     |||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||| | |||| |||||||||||| ||||||     
T  43097483 aaaagaatagtccaatcacacatattcatcaactaactagtgcttaactcaatagaccataatttatattataatattaacttataataattgattattg 43097384  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  43097383 tcaatccataat 43097372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 35941136 - 35941324
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  35941136 atgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagcgaaatggtccaacccatcacagtccatttagaaagaatagtccaat 35941235  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||||||||||||||||||||||||       ||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  35941236 cacacatattcatcaactaattagtgcttaacaca-------ataatttatattatgacattaacttataataattgattattatcaatctataat 35941324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 942 - 1101
Target Start/End: Complemental strand, 19931635 - 19931480
Alignment:
Q  942 tagacataatattttgatccctcccagttctttttggccagcttcaatacctagctagagttcaaggtattaaccatcgcatttattttggcagttcggt 1041  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||||||||||||||||||    
T  19931635 tagacataatattttgaaccctcccagttctttttggccagcttcaataccttgg----gttcaaggtattaaccatcgcatttattttggcagttcggt 19931540  T
Q  1042 ggttcttcaccttcgttaaaaagaaaggcactttttcacttgcgccttcattctctgctt 1101  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19931539 ggttcttcaccttcgttaaaaagaaaggcactttttcacttgcaccttcattctctgctt 19931480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 226 - 401
Target Start/End: Complemental strand, 11339946 - 11339771
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11339946 atgatgtttaaatagctaaacggctgagggcagggacctctcattgggtttagctaaatggtccaacccatcacggtccatttagaaagaatagtccaat 11339847  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatt 401  Q
    || | |||||||| ||||||| ||||||||| ||||||||||||| |||||||||| ||||||  |||||||||||    
T  11339846 cacatatattcattaactaatcagtgcttaatacaatagaccataatttatattataacattaatttataataatt 11339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 553 - 689
Target Start/End: Complemental strand, 16365861 - 16365722
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaa---aaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaaga 649  Q
    ||||||||||||||||||||||||||||||||||||||||| |   ||||| | ||||||||| |||||||||| ||  ||||||||||||||||||| |    
T  16365861 tttgtttaaatttgaagataacaagaaacaaattttgttttgagacaaaacaaactttagtttccaaatatatagcactaattagttttattgaaaaata 16365762  T
Q  650 taagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    |||||||||||||||||  |||||||||||||||| ||||    
T  16365761 taagaataattgacaaaaagtataattgacaaatcatacc 16365722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 456 - 689
Target Start/End: Original strand, 8544600 - 8544828
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| ||||||||||||||||||||||| ||  | ||||||||||||||||| |||||||||||| |  ||||||| ||   |         |||    
T  8544600 tgttcttttactttacacttgaaatttttaacagttgctactcatcttatttatagaattttaactcttcttgaaaccattgttt--gtaacaaaatttt 8544697  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||     | |||||||| ||||| ||||| | ||||||||||||||||||||||||||    
T  8544698 gtttgaatttgaagataacaagaaacaaactttgtttaaaaaaaa----tgtagttttccaaataaataacgttaattagttttattgaaaaagataaga 8544793  T
Q  655 ataattgacaaatggtataattgacaaatcgtacc 689  Q
     ||||||||| ||| ||||||||||||||||||||    
T  8544794 gtaattgacagatgatataattgacaaatcgtacc 8544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 276 - 421
Target Start/End: Complemental strand, 10491267 - 10491122
Alignment:
Q  276 tagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagttta 375  Q
    |||||||| |||||||||||||||||||||||||| ||||||||  ||||||  ||||||||| ||||||||||||| ||||||||||||||||| |||     
T  10491267 tagctaaacggtccaacccatcacggtccatttagtaagaatagcccaatcactcatattcattaactaattagtgcctaacacaatagaccataatttg 10491168  T
Q  376 tattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||| | || | |||||||||||| |||||| || |||||||||    
T  10491167 tattataatataaacttataataattgattattgtcgatccataat 10491122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 471 - 599
Target Start/End: Original strand, 19133339 - 19133467
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaaga 570  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||||| |||||| |||||||||| |        |||||||||||||||||    
T  19133339 cacttgaaatttttaacaattactactcatcttatttatagaattttaactcttcattgaactattattataggtaaaaaaaattgtttaaatttgaaga 19133438  T
Q  571 taacaagaaacaaattttgttttaaaaaa 599  Q
     ||||||||||||||||||||||||||||    
T  19133439 caacaagaaacaaattttgttttaaaaaa 19133467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 32717938 - 32718072
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa---aaccacctttagtttt-caaatatataacatgaattagttttattgaaaaag 648  Q
    |||||||||||||||||||||||||||| |||| |||||||||||   ||| | |||||||||| |||||||||| ||| ||||||||| |||||||||     
T  32717938 tttgtttaaatttgaagataacaagaaataaatattgttttaaaacaaaacaaactttagtttttcaaatatatagcattaattagtttaattgaaaaat 32718037  T
Q  649 ataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| ||||||| ||||||||||||||||    
T  32718038 ataagaataactgacaaagggtataattgacaaat 32718072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 456 - 687
Target Start/End: Complemental strand, 39615064 - 39614825
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| ||||| |||||||||||||||| |  | |||||||||||||| |||||||||| | | ||||||| ||||||| |       |||    
T  39615064 tgttcttttactttgcacttcaaatttttaacaattactatttatcttatttatagaattttaactctccatagaaccatcattataggtaacacaattt 39614965  T
Q  556 -gtttaaatttgaagataacaagaaacaaattttgttttaaaaaa------ccacctttagtttt-caaatatataacatgaattagttttattgaaaaa 647  Q
     |||||||||||||||||| |||||||||| ||||||| ||||||      | | ||||| |||| |||||||||| ||| |||||||||| ||||||||    
T  39614964 tgtttaaatttgaagataataagaaacaaactttgtttaaaaaaaaacaaacaaactttaatttttcaaatatatagcattaattagttttgttgaaaaa 39614865  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgta 687  Q
    ||||||| ||||| ||||| | ||||||||||||||||||    
T  39614864 gataagagtaattaacaaaggatataattgacaaatcgta 39614825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 471 - 690
Target Start/End: Complemental strand, 1583666 - 1583449
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaaga 570  Q
    |||||||||||||||||||||  | ||||||||  ||||||| |||||||||||| |||||||||| ||   |         ||||||||| ||||||||    
T  1583666 cacttgaaatttttaacaattgctactcatctttattatagaattttaactcttc-ttgaaccattgttt--gtaacaaaattttgtttaagtttgaaga 1583570  T
Q  571 taacaagaaacaaattttgttttaa-aaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatg 668  Q
    |||||| ||||||| |||||||||| ||||  | |||||||||| |||||| ||| ||| ||||||||||||||||||||| |||| | |||||||||      
T  1583569 taacaaaaaacaaactttgttttaaaaaaaaaaactttagttttccaaatagatagcattaattagttttattgaaaaagacaagagt-attgacaaaga 1583471  T
Q  669 gtataattgacaaatcgtaccc 690  Q
    ||||||||||||||||||||||    
T  1583470 gtataattgacaaatcgtaccc 1583449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 554 - 689
Target Start/End: Original strand, 12436695 - 12436829
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataa 652  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||  | || ||| |||||||||| ||| ||| ||||||||||||||||||| ||||    
T  12436695 ttgtttaaatttgaagataacaagaaacgaattttgtttaaaaaaa--aactgtagtttttcaaatagatagcattaattagttttattgaaaaatataa 12436792  T
Q  653 gaataattgacaaatggtataattgacaaatcgtacc 689  Q
    || |||||||||||  |||||||||| |||| |||||    
T  12436793 gagtaattgacaaagcgtataattgataaattgtacc 12436829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 481 - 690
Target Start/End: Complemental strand, 17201437 - 17201216
Alignment:
Q  481 ttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaagataacaagaaa 580  Q
    |||||||||||| | ||||||||||||||||| |||||||||||| | ||| |||| |  | |         ||||||||||||||||||||||||||||    
T  17201437 ttttaacaattattactcatcttatttatagaattttaactcttcttggaatcattgt--ttgtaacaaaattttgtttaaatttgaagataacaagaaa 17201340  T
Q  581 caaattttgttttaaaaaacc-------------acctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaa 666  Q
    |||| ||||||| |||||| |             | |||||||||| |||||| ||| ||| |||||||||||||||||||||||||| |||||||||||    
T  17201339 caaactttgtttaaaaaaaactttgtttagaaaaaactttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaa 17201240  T
Q  667 tggtataattgacaaatcgtaccc 690  Q
    || ||||||||||||||| |||||    
T  17201239 tgatataattgacaaatcataccc 17201216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 578 - 667
Target Start/End: Complemental strand, 14655030 - 14654940
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||||| ||||||| ||||||| | ||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  14655030 aaacaaaatttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaat 14654940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 553 - 654
Target Start/End: Original strand, 43346632 - 43346733
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagata 651  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||  | ||||||||||| ||||||||| ||| | ||||||||||| |||||||||    
T  43346632 tttgtttaaatttgtagataacaagaaacaaatttt-atttaaaaaaaaaactttagttttctaaatatatagcattacttagttttattaaaaaagata 43346730  T
Q  652 aga 654  Q
    |||    
T  43346731 aga 43346733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 594 - 690
Target Start/End: Original strand, 17202828 - 17202925
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||| | ||||||||||| ||||| ||||||| ||||||||||||||| |||||||| | ||||||||||| ||||||||||| ||||| |||||    
T  17202828 aaaaaacaaactttagttttccaaatagataacattaattagttttattgataaagataaaagtaattgacaaagggtataattgaaaaatcataccc 17202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 630 - 690
Target Start/End: Complemental strand, 19803708 - 19803648
Alignment:
Q  630 attagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  19803708 attagttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtaccc 19803648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 466 - 688
Target Start/End: Original strand, 36437221 - 36437438
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattat-tatagatnnnnnnntttgtttaaatt 564  Q
    |||| ||||||| |||||||||||||  | ||||||||||||||||| |||||||||||| | |||||||| | ||||          ||||||||||||    
T  36437221 cttttcacttgagatttttaacaattgctactcatcttatttatagaattttaactcttcttagaaccattgtctata---acaaaattttgtttaaatt 36437317  T
Q  565 tgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaa-ttagttttattgaaaaagataagaataattgac 663  Q
    |||||||||  ||||||||| ||||||| | ||||  | ||||   || |||| | ||| ||| || |||||||||||||||||||||||| |||||||     
T  36437318 tgaagataatgagaaacaaactttgtttaataaaa--aacttt--gttccaaagagatagcattaatttagttttattgaaaaagataagagtaattgat 36437413  T
Q  664 aaatggtataattgacaaatcgtac 688  Q
    ||| | ||||||||| |||||||||    
T  36437414 aaaggatataattgaaaaatcgtac 36437438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 594 - 689
Target Start/End: Original strand, 11992218 - 11992314
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||| | ||||||||||| ||||| ||| ||| ||||| ||||| |||||||||||| | ||||||||| || |||||||||||||||||||||    
T  11992218 aaaaaacaaactttagttttccaaataaatagcattaattaattttactgaaaaagataaaagtaattgacagattgtataattgacaaatcgtacc 11992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 630 - 690
Target Start/End: Original strand, 36246322 - 36246382
Alignment:
Q  630 attagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||    
T  36246322 attagttttattgaaaaagataagagtaattgagaaagggtataagtgacaaatcgtaccc 36246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 631 - 690
Target Start/End: Complemental strand, 17558005 - 17557946
Alignment:
Q  631 ttagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  17558005 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccc 17557946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 635 - 690
Target Start/End: Complemental strand, 28620034 - 28619979
Alignment:
Q  635 ttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  28620034 ttttattgaaaaagataagagtaattgacaaagggtgtaattgacaaatcgtaccc 28619979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 610 - 667
Target Start/End: Complemental strand, 1590219 - 1590162
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  1590219 ttttcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaat 1590162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 578 - 683
Target Start/End: Complemental strand, 20201739 - 20201629
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaat----aattgacaaatggtat 672  Q
    ||||||| ||| ||| ||||||  | ||||||||||| ||||||||||||| ||||||||||||||||||| |||| | |    |||||||||| |||||    
T  20201739 aaacaaactttctttaaaaaaataaactttagttttccaaatatataacattaattagttttattgaaaaatataaaagtaagaaattgacaaagggtat 20201640  T
Q  673 aattgacaaat 683  Q
    |||||||||||    
T  20201639 aattgacaaat 20201629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 630 - 690
Target Start/End: Complemental strand, 17591696 - 17591636
Alignment:
Q  630 attagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||| |||||    
T  17591696 attagttttattgaaaaagataagagtaattaagaaatggtataaatgacaaatcataccc 17591636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 454 - 653
Target Start/End: Original strand, 18413229 - 18413426
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||| |||| |||||||| ||||||||||||  |  |||||||||||||||| |||||||||||| |  |||||| |||   |         |    
T  18413229 tatgttcttttactttgcacttgaattttttaacaatttctattcatcttatttatagaattttaactcttcttgaaaccatcattt--gtaacaaaatt 18413326  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataa 652  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||  | || ||||||| ||||||  || ||| |||||  |||||||||||||||||    
T  18413327 ttgtttaaatttgaagataacaagaaacaaactgtgtttaaaaaaataaactgtagttttccaaatagctagcattaatta-atttattgaaaaagataa 18413425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 575 - 690
Target Start/End: Complemental strand, 32474282 - 32474167
Alignment:
Q  575 aagaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtata 673  Q
    |||||| ||| ||||||| ||||||| | ||||| ||||| ||||| ||| ||| ||||||||||||||||||| | | || ||||||| ||| ||||||    
T  32474282 aagaaaaaaactttgtttaaaaaaacaaactttaattttccaaatagatagcattaattagttttattgaaaaaaa-atgagtaattgataaagggtata 32474184  T
Q  674 attgacaaatcgtaccc 690  Q
    |||| ||||||||||||    
T  32474183 attggcaaatcgtaccc 32474167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 454 - 638
Target Start/End: Original strand, 42673940 - 42674126
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagtttt-aactcttcgttgaaccattattatagatnnnnnnn 552  Q
    ||||||| ||| |||| |||||||||||||||||||||  |  |||||||||||||||| |||| |||||||| | ||||  || || ||              
T  42673940 tatgttcttttactttgcacttgaaatttttaacaattgttattcatcttatttatagaatttttaactcttcttggaacatttcttgta---acaaaat 42674036  T
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt---aaaaaaccacctttagtttt-caaatatataacatgaattagtttt 638  Q
    ||| |||||||||||||||||||||||||||| ||||||||   ||||||  | |||||||||| |||||| ||||||| ||||||||||    
T  42674037 tttatttaaatttgaagataacaagaaacaaactttgttttaaaaaaaaaaaaactttagttttccaaatagataacatcaattagtttt 42674126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 11340134 - 11340068
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcatcaattataatgaatgaa 83  Q
    ||||||||||||||||||||||| ||||||||||| ||||   ||||||||||| |||| |||||||    
T  11340134 agttttagtgtttagccatggatcactagatacaagttatgacatatcatcaataataaagaatgaa 11340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 610 - 676
Target Start/End: Original strand, 36194039 - 36194105
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||||| || |||| |||||||||||||    
T  36194039 ttttcaaatagataacattaattagtttgattcaaaaagataagagtacttgaaaaatggtataatt 36194105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 612 - 684
Target Start/End: Original strand, 13220055 - 13220127
Alignment:
Q  612 ttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||||| ||| ||||||||||||||||| |||||||||| | || |||||||| | ||||||| |||||||    
T  13220055 ttcaaatagatagcatgaattagttttattaaaaaagataaaagtagttgacaaaagatataattaacaaatc 13220127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 20201790 - 20201746
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||||||||||| |||| |||||||    
T  20201790 tttgtttaaatttgaagataacaagaaacaaagtttggtttaaaa 20201746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 599
Target Start/End: Original strand, 249385 - 249523
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattata-gatnnnnnnntt 554  Q
    ||||| ||| |||| ||||||||||||||||||||||    |||||||||||||| | |||||||||||| |  || |||||||||| |         ||    
T  249385 tgttcttttactttgcacttgaaatttttaacaatta---ttcatcttatttataaaattttaactcttcataaaatcattattatatgtaacaaaattt 249481  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||   |||||||||||||||||||||||||| ||||||    
T  249482 tgtttaaat---aagataacaagaaacaaattttgtttaaaaaaa 249523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 553 - 600
Target Start/End: Original strand, 17202349 - 17202396
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaac 600  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||||    
T  17202349 tttgtttaaatttgaagataacaagaaaccaactttgtttaaaaaaac 17202396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 480 - 640
Target Start/End: Complemental strand, 6428435 - 6428276
Alignment:
Q  480 tttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaagataacaagaa 579  Q
    ||||||||||||| | ||||| ||||||||||| |||||||||||| |||||||||| ||   |         |||||| |||||| |||||||||| ||    
T  6428435 tttttaacaattactactcattttatttatagaattttaactcttc-ttgaaccattgttt--gtaacaaaattttgttaaaatttaaagataacaacaa 6428339  T
Q  580 acaaattttgtttt-aaaaaaccacctttagtttt-caaatatataacatgaattagttttat 640  Q
    ||||| |||||||| ||||||| | ||||| |||| |||||| ||| ||| ||||||||||||    
T  6428338 acaaactttgtttttaaaaaacaaactttaatttttcaaatagatagcattaattagttttat 6428276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 11992149 - 11992195
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  11992149 tttgtttaaatttggagataacaagaaataaactttgttttaaaaaa 11992195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 595
Target Start/End: Complemental strand, 14655073 - 14655039
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaa 595  Q
    |||||||||||||||||||||||||||||||||||    
T  14655073 aatttgaagataacaagaaacaaattttgttttaa 14655039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 757 - 795
Target Start/End: Complemental strand, 19931759 - 19931721
Alignment:
Q  757 cggatggagtaattgacaaattgtacattcaaattatcg 795  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19931759 cggatggagtaattgacaaattgtactttcaaattatcg 19931721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 555 - 597
Target Start/End: Original strand, 36060155 - 36060197
Alignment:
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  36060155 tgtttaaatttgaagataacaaaaaacaatttttgttttaaaa 36060197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 37269626 - 37269581
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||    
T  37269626 ttgtttaaatctgaagataacaggaaacaaattttgtttttaaaaa 37269581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 614 - 654
Target Start/End: Original strand, 11825454 - 11825494
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  11825454 caaatatacaacattaattagttttattgaaaaagataaga 11825494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 597
Target Start/End: Complemental strand, 32474321 - 32474281
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  32474321 tttaaatttgaagataacaagaaacaaactttgtcttaaaa 32474281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 615 - 687
Target Start/End: Original strand, 39585777 - 39585851
Alignment:
Q  615 aaatatataacatgaattagttttattgaa--aaagataagaataattgacaaatggtataattgacaaatcgta 687  Q
    ||||| ||| ||| ||||||||||||||||  ||||||||||| |||||||||| | | |||| |||||||||||    
T  39585777 aaatagatagcattaattagttttattgaataaaagataagaacaattgacaaaggatgtaatcgacaaatcgta 39585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 757 - 794
Target Start/End: Complemental strand, 19924811 - 19924774
Alignment:
Q  757 cggatggagtaattgacaaattgtacattcaaattatc 794  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  19924811 cggatgaagtaattgacaaattgtaccttcaaattatc 19924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 645 - 690
Target Start/End: Original strand, 42674141 - 42674186
Alignment:
Q  645 aaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| ||||||||||| ||||| |||||||||| ||||||    
T  42674141 aaagataagagtaattgacaaagggtatcattgacaaattgtaccc 42674186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 160; Significance: 1e-84; HSPs: 4)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 9074 - 8863
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  9074 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggttcaacccatcacggtccattta 8975  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||     
T  8974 gaaagaatagatcaatcacacatattcataaactaattagtgcttaacacaatagaccataatttatattatgactttaacttataataattgattattg 8875  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  8874 tcaatccataat 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502; HSP #2
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 210 - 384
Target Start/End: Complemental strand, 4374 - 4200
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  4374 ttaaccgtctgatgggatgacgtttaaatagctgaacggttgagggcagggacctctcattgggcttagctaaatggttcaacccatcacggtccattta 4275  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgac 384  Q
    ||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  4274 gaaagaatagtccaatcacacatattcataaactaattagtgtttaacacaatagaccataatttatattatgac 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4545 - 4497
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||||| | |||||||| ||||||| ||||||    
T  4545 agttttagtgtttagccatggatcattagatacagattatagcatatca 4497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 9245 - 9197
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||||| | |||||||| ||||||| ||||||    
T  9245 agttttagtgtttagccatggatcattagatacagattatagcatatca 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 1e-84; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 18338250 - 18338039
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  18338250 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggttcaacccatcacggtccattta 18338151  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||     
T  18338150 gaaagaatagatcaatcacacatattcataaactaattagtgcttaacacaatagaccataatttatattatgactttaacttataataattgattattg 18338051  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  18338050 tcaatccataat 18338039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 221 - 420
Target Start/End: Original strand, 23848582 - 23848781
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23848582 atgggatgacgtttaaatagctaaacggctaagggcagggacctctcattgggcttagctaaatggttcaacccatcacggtccatttagaaagaatagt 23848681  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     |||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  23848682 ccaatcacacatattcatcaattaattagtgctttacacaatagaccataatttatattatgacattaacttataataattgattattgtcaatccataa 23848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 9972911 - 9972700
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  9972911 ttaaccgtctgatgggataacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggttcaacccatcacggtccattta 9972812  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |  |||||||  ||||||||||||||||||||||||| | || |||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  9972811 gttagaatagcccaatcatacatattcatcaactaatgaatgtttaatacaatagaccatattataaattataacattaatttataataattgattattg 9972712  T
Q  410 tcaatccataat 421  Q
    |||||| |||||    
T  9972711 tcaatctataat 9972700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 210 - 397
Target Start/End: Original strand, 32932316 - 32932503
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| |||||| |||||||||| ||  |||||||||||| | |||||||||||||| |||||| | |||||||    
T  32932316 ttaaccgtctgatgggatgacgtttaaatagttaaacgactgagggcagagatctctcattgggctcaactaaatggtccaacacatcacagcccattta 32932415  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataat 397  Q
    |||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  32932416 gaaagaatagctcaatcacacatattcatcaattaattagtgtttaacacaatagaccataatttatattatgacattaacttataat 32932503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 210 - 413
Target Start/End: Original strand, 7553418 - 7553620
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||| ||||||||| ||||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||    
T  7553418 ttaaccgtctgatgggatgatgtttaaataactaaacggccgagggcagggacttctcactgggtttagctaaatggtccaacccatcacgatccattta 7553517  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
     |||||||||  |||||  ||||||||||| | |||||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||     
T  7553518 aaaagaatagcccaatcgcacatattcatc-attaattaatgcttaacaccatagaccataatttatattatgacattaacttataataattgattattg 7553616  T
Q  410 tcaa 413  Q
    ||||    
T  7553617 tcaa 7553620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 22958096 - 22958286
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  22958096 atgggatgacgtttaaatagctaatcggctgagggcagggacttctcattgggcttaactaaatggttcaacccatcacggtccatttaaaaagaataac 22958195  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
      ||||| |||| |||||||| ||||||||||||          |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  22958196 ctaatcacacattttcatcaattaattagtgctt----------accatagtttatattatgacattaacttataataattgattattgtcaatccataa 22958285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 221 - 421
Target Start/End: Complemental strand, 23830296 - 23830106
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  23830296 atgggatgacgtttaaatagctaatcggctgagggcagggacttctcattgggcttaactaaatggttcaacccatcacggtccatttaaaaagaataac 23830197  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
      ||||| |||| |||||||| ||||||||||||          |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  23830196 ctaatcacacattttcatcaattaattagtgctt----------accatagtttatattatgacattaacttataataattgattattgtcaatccataa 23830107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 7972594 - 7972732
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagata 651  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||| ||||||||||||||||||| ||     
T  7972594 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaaaaacaaactttagtttttcaaatatataacattaattagttttattgaaaaatatt 7972693  T
Q  652 agaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||||  |||||||||| ||||| |||||    
T  7972694 agaataattgacaaagtgtataattgataaatcataccc 7972732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 27101639 - 27101529
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| || | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27101639 ttaaccgtctgatgggataaagtttaaatagctaaacgactgagggcagggacatctcattgggcttaactaaatggttcaacccatcacggtccattta 27101540  T
Q  310 gaaagaatagt 320  Q
    |||||||||||    
T  27101539 gaaagaatagt 27101529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 27143461 - 27143351
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| || | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27143461 ttaaccgtctgatgggataaagtttaaatagctaaacgactgagggcagggacatctcattgggcttaactaaatggttcaacccatcacggtccattta 27143362  T
Q  310 gaaagaatagt 320  Q
    |||||||||||    
T  27143361 gaaagaatagt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 553 - 684
Target Start/End: Complemental strand, 4666013 - 4665874
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-------aaccacctttagtttt-caaatatataacatgaattagttttattgaa 644  Q
    ||||||||||||| |||||||||||||||||||||||||||||||       ||| | |||||||||| |||||||||| ||| ||||||||||||| ||    
T  4666013 tttgtttaaatttaaagataacaagaaacaaattttgttttaaaacaaaacaaacaaactttagtttttcaaatatatagcattaattagttttatttaa 4665914  T
Q  645 aaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||| |||||| ||||||| |||||||||||||||||||||    
T  4665913 aaatataagagtaattgataaatggtataattgacaaatc 4665874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 467 - 677
Target Start/End: Complemental strand, 34889279 - 34889064
Alignment:
Q  467 tttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttg 566  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| |||||||| ||| |  |||||||||||||| |           ||||| |||     
T  34889279 tttacacttgaaatttttaacaattattactcatcttatttatagaattttaactattcataaaaccattattataggtaataaaaaaaatttaactttt 34889180  T
Q  567 aagataacaagaaacaaattttgttt----taaaaaaccaccttt-agttttcaaatatataacatgaattagttttattgaaaaagataagaataattg 661  Q
    |||||||||| |||||||||||||||     ||||||| | |||| | |||||||||||||||||  |||||||||||||||||||||||||| |||||     
T  34889179 aagataacaataaacaaattttgtttcagagaaaaaacaaactttaatttttcaaatatataacaataattagttttattgaaaaagataagagtaatta 34889080  T
Q  662 acaaatggtataattg 677  Q
    |||||  |||||||||    
T  34889079 acaaagagtataattg 34889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 19543582 - 19543490
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaata 318  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  19543582 atgacgtttaaatagctaaacggctaagggcagggacctctcattcggcttagttaaatggtccaacccatcacggcccatttaaaaagaata 19543490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 578 - 688
Target Start/End: Original strand, 6111110 - 6111221
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||||| |    
T  6111110 aaacaaactttgtttaaaaaaacaaactttagttttccaaatatataacattaattagttttatttaaaaagataagagtaattgataaatggtataact 6111209  T
Q  677 gacaaatcgtac 688  Q
    ||||||||||||    
T  6111210 gacaaatcgtac 6111221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 560 - 689
Target Start/End: Complemental strand, 8049301 - 8049170
Alignment:
Q  560 aaatttgaagataacaagaaacaaattttgtttta-aaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaata 657  Q
    |||| |||||||||||||||||||||||||||| | |||||| | ||||||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||    
T  8049301 aaatgtgaagataacaagaaacaaattttgtttaagaaaaacaaactttagttttccaaatagatatcattaattagttttattgaaaaagataagagta 8049202  T
Q  658 attgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||||| |||| |||||| ||||| ||||    
T  8049201 attgacaaagggtaaaattgataaatcatacc 8049170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 456 - 687
Target Start/End: Complemental strand, 23410709 - 23410476
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| || ||||||||||||||||||| | || |||||||||||| | || ||||| ||| | ||||| |||| |||| |       |||    
T  23410709 tgttcttttactttgcatttgaaatttttaacaattactacttatcttatttataaaattgtaactattcatagaaccgttatcataggtaacaaaattt 23410610  T
Q  556 -gtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataag 653  Q
     |||||||||| |||||||||||||||||| ||||||  ||||||  | |||||| | || ||||||||||||| ||||||||||||| ||||||||||     
T  23410609 tgtttaaattttaagataacaagaaacaaactttgttaaaaaaaaaaaactttagctatccaaatatataacattaattagttttattaaaaaagataaa 23410510  T
Q  654 aataattgacaaatggtataattgacaaatcgta 687  Q
    | |||||  ||||  |||||||||||||||||||    
T  23410509 agtaatttgcaaagagtataattgacaaatcgta 23410476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 605 - 690
Target Start/End: Original strand, 9095783 - 9095869
Alignment:
Q  605 tttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9095783 tttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtataattgacaaatcataccc 9095869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 466 - 599
Target Start/End: Original strand, 6110973 - 6111107
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntttgtttaaatt 564  Q
    |||||||||| |||||||||||||||| | ||||||||||||||| | |||||||||||| |||||| |||||||||| |        ||| ||||| ||    
T  6110973 ctttacactttaaatttttaacaattactactcatcttatttataaaattttaactcttcattgaacaattattataggtaacaaaattttatttaagtt 6111072  T
Q  565 tgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||||||||||||| ||||||| ||||||    
T  6111073 tgaagataacaagaaacaaactttgtttcaaaaaa 6111107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 274 - 415
Target Start/End: Original strand, 15121589 - 15121730
Alignment:
Q  274 cttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtt 373  Q
    ||||| ||||| |||||||| ||||| ||||||||| ||| ||||  ||||||| ||||||||||||||||||||||  ||||||||||| |||||| ||    
T  15121589 cttagttaaatcgtccaaccgatcacagtccatttataaacaataactcaatcacacatattcatcaactaattagttattaacacaatataccataatt 15121688  T
Q  374 tatattatgacattagcttataataatttattattatcaatc 415  Q
    ||||||   | || | |||||||||||| |||||| ||||||    
T  15121689 tatattgaaagatgaacttataataattgattattgtcaatc 15121730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 576 - 690
Target Start/End: Original strand, 2437820 - 2437935
Alignment:
Q  576 agaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataa 674  Q
    ||||||||| ||||||  ||||||  |  |||||||||| ||||| ||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  2437820 agaaacaaactttgttaaaaaaaaaaaaatttagttttccaaatagatatcattaattagttttattgaaaaaaataagaataattgacaaagggtataa 2437919  T
Q  675 ttgacaaatcgtaccc 690  Q
    |||||||||| |||||    
T  2437920 ttgacaaatcataccc 2437935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 21527311 - 21527424
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | |||||||||| |||||||| | ||| ||||||||||| ||||||| || ||||||||||||||| ||| |||||    
T  21527311 aaacaaactttgtttaaaaaaacaaactttagtttttcaaatataaagcattaattagttttaatgaaaaatattagaataattgacaaagggtttaatt 21527410  T
Q  677 gacaaatcgtaccc 690  Q
    |||||||| |||||    
T  21527411 gacaaatcataccc 21527424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 553 - 690
Target Start/End: Complemental strand, 25056630 - 25056480
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacc------------acctttagttttc-aaatatataacatgaattagtttta 639  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||             | ||||||||||| ||||| ||| ||| |||||||||||    
T  25056630 tttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaactttgtttagaaaaaactttagttttccaaatagatagcattaattagtttta 25056531  T
Q  640 ttgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||||| |||||||||||  |||| ||||||||||| |||||    
T  25056530 ttgaaaaagataagagtaattgacaaagagtatgattgacaaatcataccc 25056480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 21527179 - 21527304
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagat 571  Q
    ||||||||||||||||| || | ||||| ||||| ||||| |||||||||||| | |||| ||||| |||| |       ||| ||||||||||||||||    
T  21527179 cttgaaatttttaacaagtactactcatgttattcatagaattttaactcttcatggaactattatcataggtaacaaaattttgtttaaatttgaagat 21527278  T
Q  572 aacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||||||||    
T  21527279 aacaagaaacaaattttgttttaaaa 21527304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 4122851 - 4122778
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  4122851 ttttcaaatagataacattaattaattttattgaaaaagataagagtaattgagaaatggtataagtgacaaat 4122778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 604 - 685
Target Start/End: Original strand, 14093799 - 14093881
Alignment:
Q  604 ctttagttttcaaa-tatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcg 685  Q
    |||||||||||||| |  ||| ||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  14093799 ctttagttttcaaaatcgatagcattaattagttttattgaaaaagataagagtaattgacaaagagtataattgacaaatcg 14093881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 28498191 - 28498260
Alignment:
Q  18 gttttagtgtttagccatggataactagatacaaattatagaatatcatcaattataatgaatgaagaaa 87  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  28498191 gttttagtatttagccatggatcactagatacaaattatagtatatcatcaataataaagaaggaagaaa 28498260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 29810602 - 29810671
Alignment:
Q  18 gttttagtgtttagccatggataactagatacaaattatagaatatcatcaattataatgaatgaagaaa 87  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  29810602 gttttagtatttagccatggatcactagatacaaattatagtatatcatcaataataaagaaggaagaaa 29810671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 466 - 599
Target Start/End: Complemental strand, 8461077 - 8460941
Alignment:
Q  466 ctttacacttgaaatttttaacaattaa--ttctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaa 562  Q
    |||| |||||||| |||||||||||||   | || |||||||||||||| |||||||| ||| | |||||||| |||||| |       ||| |||||||    
T  8461077 ctttgcacttgaagtttttaacaattatactacttatcttatttatagaattttaactattcatggaaccattgttataggtaacaaagttttgtttaaa 8460978  T
Q  563 tttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||| |||||||||||||||||| ||||||||||||||    
T  8460977 ttttaagataacaagaaacaaactttgttttaaaaaa 8460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 553 - 684
Target Start/End: Complemental strand, 4184809 - 4184685
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataa 652  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |  ||          |||||||||| ||| ||||| ||||||| ||||| ||||    
T  4184809 tttgtttaaatttaaagataacaagaaacaaattttgttttaaaacaaaac-------aaacaaatatatagcattaattaattttatttaaaaatataa 4184717  T
Q  653 gaataattgacaaatggtataattgacaaatc 684  Q
    || ||||||| |||| | ||||||||||||||    
T  4184716 gagtaattgataaatagaataattgacaaatc 4184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 593
Target Start/End: Original strand, 9095704 - 9095744
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt 593  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9095704 tttgtttaaatttgaagataacaagaaacaaattttgtttt 9095744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 454 - 589
Target Start/End: Complemental strand, 34259795 - 34259663
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||| |||| ||||||||||||||||||||||    |||||||||||||||| ||||||||||||    ||||||||||  || |       |    
T  34259795 tatgttcttttactttgcacttgaaatttttaacaatta---ttcatcttatttatagaattttaactcttcacaaaaccattattggaggtaatttttt 34259699  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttg 589  Q
    | |||||||| |||||||||||| ||||||||||||    
T  34259698 tggtttaaatctgaagataacaataaacaaattttg 34259663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 26252669 - 26252716
Alignment:
Q  642 gaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||    
T  26252669 gaaaaagatacgagtaattgacaaatggtataattgacaaatcgtacc 26252716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 367 - 421
Target Start/End: Complemental strand, 19543478 - 19543424
Alignment:
Q  367 catagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  19543478 cataatttatattatgacattaacttataataattgattattgtcaatccataat 19543424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 615 - 690
Target Start/End: Original strand, 6396629 - 6396705
Alignment:
Q  615 aaatatataacatgaattagttttattgaaaa-agataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||| || |||| |||||||||||||||||| |||||||||||||| | ||| |||||||||||||| || |||||    
T  6396629 aaatacattacattaattagttttattgaaaaaagataagaataattaagaaagggtataattgacaactcttaccc 6396705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 365 - 421
Target Start/End: Complemental strand, 27101515 - 27101459
Alignment:
Q  365 accatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||| |||||||||| |||||| |||||||||||| |||||| ||||||||||||    
T  27101515 accataatttatattataacattaacttataataattgattattgtcaatccataat 27101459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 365 - 421
Target Start/End: Complemental strand, 27143337 - 27143281
Alignment:
Q  365 accatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||| |||||||||| |||||| |||||||||||| |||||| ||||||||||||    
T  27143337 accataatttatattataacattaacttataataattgattattgtcaatccataat 27143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 8049392 - 8049337
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaact 521  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||| ||||||||    
T  8049392 ctttacacttgaaatttttaacaattgctactcatcttttttatagaattttaact 8049337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 586 - 654
Target Start/End: Original strand, 26252586 - 26252655
Alignment:
Q  586 tttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    ||||||| ||||||| | ||||| ||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  26252586 tttgtttaaaaaaacaaactttatttttccaaatatatagcattaattagttttattaaaaaagataaga 26252655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 18338421 - 18338373
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||||| | |||||||| ||||||| ||||||    
T  18338421 agttttagtgtttagccatggatcattagatacagattatagcatatca 18338373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 14093646 - 14093697
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    |||||||||||||| ||||  | ||||||||||||||||| |||||||||||    
T  14093646 cttgaaatttttaaaaattgttactcatcttatttatagaattttaactctt 14093697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 631 - 690
Target Start/End: Original strand, 21014257 - 21014316
Alignment:
Q  631 ttagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||| ||||||||| |||| | | ||||| ||| |||||||||||||||||||||||    
T  21014257 ttagtttgattgaaaaaaataaaagttattgagaaagggtataattgacaaatcgtaccc 21014316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7553245 - 7553291
Alignment:
Q  19 ttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||||    
T  7553245 ttttagtgtttagccatggatcattatatacaaattatagcatatca 7553291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 9353186 - 9353140
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataatt 660  Q
    |||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  9353186 caaatagatagcattaattagttttattgaaaaagataagagtaatt 9353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 471 - 512
Target Start/End: Original strand, 2437702 - 2437743
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttataga 512  Q
    |||||||||||||||||||||  | |||||||||||||||||    
T  2437702 cacttgaaatttttaacaattgttactcatcttatttataga 2437743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 472 - 525
Target Start/End: Complemental strand, 25056708 - 25056656
Alignment:
Q  472 acttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||||||||||| |||||||  | ||||||||||||||||| ||||||||||||    
T  25056708 acttgaaatttt-aacaattgttactcatcttatttatagaattttaactcttc 25056656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 7e-83; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 7e-83
Query Start/End: Original strand, 149 - 421
Target Start/End: Complemental strand, 36049088 - 36048816
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    |||||| ||||||||| |||||| || |||| ||||||||||| | || | ||||||| ||||||  || | |||| |||||||||||||||||||||||    
T  36049088 gagaggaataactaccttcattccgtttagcgttaggttttcagagtagtgttcagaataattaatcgtatgatgggatgacgtttaaatagctaaacgg 36048989  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||    
T  36048988 ctgagggcagagacctctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagcccaatcacacatattcatcatctaatta 36048889  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||| ||||||||| |||||||| |||||||||||| |||| |||||||||||| |||||| |||| |||||||    
T  36048888 gtgtttaacacaaaagaccataatttatattatgaaattaacttataataattgattattgtcaaaccataat 36048816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 149 - 421
Target Start/End: Complemental strand, 2229055 - 2228783
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||  | |||| || | ||||| |||| |||  ||||||||||||||| |||||||    
T  2229055 gagagggataactaccctcattccgttcagctttaggttttcacaatgttgttcaaaatacttaaccgtctgatgagatgacgtttaaatagttaaacgg 2228956  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
     ||||||| | ||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2228955 ttgagggctgagacctctaattgggcttagttaaatggttcaacccatcacggtccatttagaaagaatagctcaatcacacatattcatcaactaatta 2228856  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||| ||| |||||||||||| |||||||||| | |||| |||||||||||| |||||| || |||||||||    
T  2228855 gtgctcaactcaatagaccataatttatattataatattaacttataataattgattattgtcgatccataat 2228783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 6262342 - 6262131
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| || |||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  6262342 ttaaccgtctgatgggataacgtttaaatagctaaacggctaagggcagacacctctcattgggcttagctaaatggtccaacccatcacgatccattta 6262243  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||     
T  6262242 gaaagaatagtccaatcacacatattcgtcaattaattagtgcttaacacaatagaccataatttatattatgacattaacttataataattgattattg 6262143  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  6262142 tcaatccataat 6262131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 35904991 - 35905202
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    |||||||||| |||  ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  35904991 ttaactgtctgatgagatgacgtttaaatagctaaacggctaagggcagagacctctcattgggcttagctaaatggttcaacccatcacggtccattta 35905090  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||  |||||||||||| ||||||     
T  35905091 gaaagaatagttcaatcacccatattcatcaactaattagtgcttaacacaatagaccataatttacattatgatatttacttataataattgattattg 35905190  T
Q  410 tcaatccataat 421  Q
    | ||||||||||    
T  35905191 tgaatccataat 35905202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 42567648 - 42567859
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  42567648 ttaaccgtctgatgggatgacgtttaaatagttaaacagctgagggcagggacctctcattgggcttagctaaatggtccaactcatcacggtccattta 42567747  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
     |||||||||  |||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| | |||||||||||| ||||||     
T  42567748 aaaagaatagcccaatcagacatattcatcaactaattaatgcttaacgcaatagaccataatttatattatgacatcaacttataataattgattattg 42567847  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  42567848 tcaatccataat 42567859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 149 - 421
Target Start/End: Original strand, 13393617 - 13393890
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    ||||||||| ||| ||||||||| ||||| |||||||||||||||||||| |||||||   ||||| |||| |||  |||| ||||||||||||||| ||    
T  13393617 gagagggatgactgccctcattccgtctaactttaggttttcacaatactgttcagaatgtttaaccgtctgatgagatgaagtttaaatagctaaatgg 13393716  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||  |||||||||||||||||||    
T  13393717 ctgagggaaaggacctctcattgggcttagctaaatggtccaactcatcacggtccatttaaaaagaatagcttaatcacgcatattcatcaactaatta 13393816  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagc--ttataataatttattattatcaatccataat 421  Q
    ||| ||||| |||||||||||| |||||||||| | ||| ||  ||||||||||| |||||| ||||||||||||    
T  13393817 gtgtttaactcaatagaccataatttatattataatatt-gcttttataataattgattattgtcaatccataat 13393890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 149 - 421
Target Start/End: Original strand, 13396756 - 13397029
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    ||||||||| ||| ||||||||| ||||| |||||||||||||||||||| |||||||   ||||| |||| |||  |||| ||||||||||||||| ||    
T  13396756 gagagggatgactgccctcattccgtctaactttaggttttcacaatactgttcagaatgtttaaccgtctgatgagatgaagtttaaatagctaaatgg 13396855  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||  |||||||||||||||||||    
T  13396856 ctgagggaaaggacctctcattgggcttagctaaatggtccaactcatcacggtccatttaaaaagaatagcttaatcacgcatattcatcaactaatta 13396955  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagc--ttataataatttattattatcaatccataat 421  Q
    ||| ||||| |||||||||||| |||||||||| | ||| ||  ||||||||||| |||||| ||||||||||||    
T  13396956 gtgtttaactcaatagaccataatttatattataatatt-gcttttataataattgattattgtcaatccataat 13397029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 221 - 421
Target Start/End: Complemental strand, 33366884 - 33366681
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  33366884 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacgatccatttagaaagaataac 33366785  T
Q  321 tcaatcatacatattcatcaac---taattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatcca 417  Q
     |||||||||||||||||||||   |||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||||    
T  33366784 ccaatcatacatattcatcaactaataatgagtgcttaatacaatagaccatactataaattataacattaatttataataattgattattgtcaatcca 33366685  T
Q  418 taat 421  Q
    ||||    
T  33366684 taat 33366681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 18891118 - 18891318
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||||| | ||||||||||    
T  18891118 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttaactaaatggtctaacccatcacagtccattcaaaaagaatagt 18891217  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     ||||||||||||||||||||||||| ||||||||| |||||| |||||| | || ||||| ||||||  ||||||||||| |||||| |||||||||||    
T  18891218 ccaatcatacatattcatcaactaatgagtgcttaatacaatataccatattataaattataacattaatttataataattgattattgtcaatccataa 18891317  T
Q  421 t 421  Q
    |    
T  18891318 t 18891318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 24423223 - 24423417
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||| |||||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  24423223 atgacatttaaatagctaaacgactgagggaagggacctctcattgggcttagttaaatggtccaacccattacgatccatttagaaagaatagtccaat 24423322  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||| | ||||||||||||||||||||| |||||| ||||||| || |||||| |||||||||||| |||||| ||||||||||||    
T  24423323 cacacatattcatc-attaattagtgcttaacacaatataccataatttatataataacattaacttataataattgattattgtcaatccataat 24423417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 259 - 421
Target Start/End: Complemental strand, 54256330 - 54256170
Alignment:
Q  259 ggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaaca 358  Q
    |||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  54256330 ggacctctcattgagcttagctaaatggttcaaccgatcacggtccatttagaaagaatagttcaatca--catattcatcaattaattagtgcttaaca 54256233  T
Q  359 caatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||| |||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||    
T  54256232 caatagatcataatttatattatgacattaacatataataattgattattgtcaatccataat 54256170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 239 - 421
Target Start/End: Complemental strand, 33361747 - 33361565
Alignment:
Q  239 agctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcat 338  Q
    ||||||||||||||||  |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||    
T  33361747 agctaaacggctgaggttagggacctctcattagacttagctaaatggtccaacccatcacggtccatttagaaagaataacccaatcatacatatttat 33361648  T
Q  339 caactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||||| ||||||||| |||||||  |||| | || ||||| ||||||  ||||||||||| |||||| ||||||||||||    
T  33361647 caactaatgagtgcttaatacaataggtcatactataaattataacattaatttataataattgattattgtcaatccataat 33361565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 216 - 377
Target Start/End: Original strand, 44160727 - 44160887
Alignment:
Q  216 gtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaaga 315  Q
    |||| |||| |||||||||||||||||||||||| ||||||| |||  |||| ||||||||||||||||||| ||||||| |||| |||||||| |||||    
T  44160727 gtctgatgggatgacgtttaaatagctaaacggccgagggcaaggatctctcgttgggcttagctaaatggttcaacccaccacg-tccatttaaaaaga 44160825  T
Q  316 atagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttata 377  Q
    |||| ||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  44160826 atagctcaatcacacatattcatcaactaatttgtacttaacacaatagaccataatttata 44160887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 45635409 - 45635551
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacc----acctttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||||||||||||||||||||||||||||||||||||||      | ||||||||||| ||||||||||||| |||||||||||||||||||    
T  45635409 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaataaaaactttagttttccaaatatataacattaattagttttattgaaaaa 45635508  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
     |||||| ||||||||||||||||||||||| |||||||||||    
T  45635509 tataagagtaattgacaaatggtataattgataaatcgtaccc 45635551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 680
Target Start/End: Complemental strand, 50721029 - 50720899
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa--aaccacctttagtttt-caaatatataacatgaattagttttattgaaaaaga 649  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||  ||| | |||| ||||| |||||| ||| ||| |||||||||||||||||||||    
T  50721029 tttgtttaaatttgaagataataagaaacaaactttgtttaaaaataaacaaacttttgtttttcaaatagatagcattaattagttttattgaaaaaga 50720930  T
Q  650 taagaataattgacaaatggtataattgaca 680  Q
    ||||| |||||||||||||||||||||||||    
T  50720929 taagagtaattgacaaatggtataattgaca 50720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 34031959 - 34032096
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaa-ttttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||||| || ||||||||||||||| |||||||| ||||||  | ||||||||||| ||||| |||| || ||||||||||||||||||||||    
T  34031959 tttgtttaaatttaaaaataacaagaaacaaacttttgtttaaaaaaa--aactttagttttctaaatagataatattaattagttttattgaaaaagat 34032056  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    || | ||||| ||||| |||||||||||||||||||||||    
T  34032057 aaaactaattaacaaagggtataattgacaaatcgtaccc 34032096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 37209938 - 37210076
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa-------ccacctttagttttc-aaatatataacatgaattagttttattgaa 644  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||       | | ||||||||||| ||||| ||| |||  |||||||||||||||    
T  37209938 tttgtttaaatttgaagataacaagaaacaaactttgttttaaaaaaaaaaaaacaaactttagttttccaaatagatagcattgattagttttattgaa 37210037  T
Q  645 aaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  37210038 aaagataaaaataattgacaaagggtataattgacaaat 37210076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 9089574 - 9089713
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacca--cctttagttttcaaatatataacatgaattagttttattgaaaaagat 650  Q
    |||||||||||||||||||||||||||||| |  |||||| ||||||  |  | || | |||||||||| ||| ||| ||||||||||||||||||||||    
T  9089574 tttgtttaaatttgaagataacaagaaacatacattgtttaaaaaaaaaaagctttaatttttcaaatagatagcattaattagttttattgaaaaagat 9089673  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||| ||||||||||| |||| |||||| |||||||||||    
T  9089674 aagagtaattgacaaagggtacaattgataaatcgtaccc 9089713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 553 - 659
Target Start/End: Complemental strand, 33889729 - 33889622
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagata 651  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||  |  ||||||||| |||||||||| ||| ||||||||||||| |||||||||    
T  33889729 tttgtttaaatctgaagataacaagaaacaaattttgtttttaaaaaaaaattttagttttccaaatatatagcattaattagttttattaaaaaagata 33889630  T
Q  652 agaataat 659  Q
    ||| ||||    
T  33889629 agagtaat 33889622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 474 - 689
Target Start/End: Original strand, 54982634 - 54982852
Alignment:
Q  474 ttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattatta-tagatnnnnnnntttgtttaaatttgaagata 572  Q
    ||||||||||||||||||  | ||||||||||||||||| |||||||||||| |  ||||||| ||  |||         ||||| ||||||||||||||    
T  54982634 ttgaaatttttaacaattgttactcatcttatttatagaattttaactcttcttgaaaccattgtttgtag---caaaattttgtataaatttgaagata 54982730  T
Q  573 acaagaaacaaattttgttttaaaa---aaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||||||||||| ||||||| ||||   |||||  ||||||||||| ||||| ||| ||| | |||||||||||||||| ||||| | |||||||||||     
T  54982731 acaagaaacaaactttgtttaaaaagaaaaccaaactttagttttccaaatagatagcattagttagttttattgaaaaggataaaagtaattgacaaag 54982830  T
Q  668 ggtataattgacaaatcgtacc 689  Q
     ||||||||||||||| |||||    
T  54982831 agtataattgacaaattgtacc 54982852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 24538291 - 24538403
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||| | | |||||    
T  24538291 aaacaaactttgttt-aaaaaacaaactttagttttccaaatatataacactaattagttttattgaaaaatataagaataattgacaaaggttgtaatt 24538389  T
Q  677 gacaaatcgtaccc 690  Q
    |||||||| |||||    
T  24538390 gacaaatcataccc 24538403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 560 - 654
Target Start/End: Original strand, 667994 - 668090
Alignment:
Q  560 aaatttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||| |||||| |||||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  667994 aaatctgaagacaacaagaaacaaattttgttttaaaaaaacaaactttagttttccaaatatataacattaattagttttatttaaaaagataaga 668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 38840372 - 38840508
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaa-----aaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaa 646  Q
    |||||||||||||||||||||||||||||||| |||||||||||     |||| | |||||| |||||||||| ||| ||| ||||||||||| | ||||    
T  38840372 tttgtttaaatttgaagataacaagaaacaaactttgttttaaaataacaaacaaactttagtttttcaaatagatagcattaattagttttactaaaaa 38840471  T
Q  647 agataagaataattgacaaatggtataattgacaaat 683  Q
    |||||| | |||||| |||| | ||||||||||||||    
T  38840472 agataaaagtaattgtcaaaggatataattgacaaat 38840508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 466 - 660
Target Start/End: Complemental strand, 2493059 - 2492863
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatag-agttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatt 564  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||| | |||||||||||| |  ||||||| |  | |         ||||||||||||    
T  2493059 ctttacacttgaaatttttaacaattgctactcatcttttttatagaatttttaactcttcttataaccattgt--ttgtaacaaaattttgtttaaatt 2492962  T
Q  565 tgaagataacaagaaacaaattttgtttt--aaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataatt 660  Q
    |||||||||||| ||||||||||||||||  ||||||  | |||||| |||||||||| ||| ||| ||||||||||||| |||||||||||| |||||    
T  2492961 tgaagataacaaaaaacaaattttgtttttaaaaaaataaactttagtttttcaaatagatagcattaattagttttattaaaaaagataagagtaatt 2492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 468 - 667
Target Start/End: Complemental strand, 25494046 - 25493838
Alignment:
Q  468 ttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttga 567  Q
    ||||| ||||||||||||||||||  | ||||||||||||||| | |||||||||||| | |||||||| ||   |         |||||||||||||||    
T  25494046 ttacaattgaaatttttaacaattgttactcatcttatttatataattttaactcttcttggaaccattgttt--gtaacaaaattttgtttaaatttga 25493949  T
Q  568 agataacaagaaacaaattttgtttta----------aaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaat 656  Q
    ||||| ||||||||||| |||||||||          |||||| | ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |    
T  25493948 agataccaagaaacaaactttgttttattctttaaataaaaacaaactttagttttccaaatagataacattaattagttttattgaaaaagataagagt 25493849  T
Q  657 aattgacaaat 667  Q
    ||||| |||||    
T  25493848 aattgtcaaat 25493838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 594 - 683
Target Start/End: Complemental strand, 25490549 - 25490459
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    ||||||| | ||||||||||| ||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  25490549 aaaaaacaaactttagttttccaaatatataacattaattatttttattgaaaatgataagagtaattgacaaatggtataattaacaaat 25490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 629 - 686
Target Start/End: Complemental strand, 6949142 - 6949085
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgt 686  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6949142 aattagttttattgaaaaagataagagtaattgacaaatggtataattgacaaatcgt 6949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 578 - 690
Target Start/End: Complemental strand, 46195849 - 46195736
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | ||||| |||| |||||  ||||||| ||||||||||| |||||||||||| | ||||||||||| |||||||||    
T  46195849 aaacaaactttgtttaaaaaaacaaactttaatttttcaaattgataacattaattagttttactgaaaaagataaaagtaattgacaaagggtataatt 46195750  T
Q  677 gacaaatcgtaccc 690  Q
    ||||||| ||||||    
T  46195749 gacaaattgtaccc 46195736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 611 - 683
Target Start/End: Original strand, 24074131 - 24074203
Alignment:
Q  611 tttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  24074131 tttcaaatagataacattaattagttttattgaaaaagttaagagtaattgacaaagggtataattgacaaat 24074203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 310 - 421
Target Start/End: Complemental strand, 43444942 - 43444831
Alignment:
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |||||||||||  ||||  |||||||||||||||||| |||| |||||||||||||||||| |||||| ||| | |||| | |||||||||| | ||||     
T  43444942 gaaagaatagtctaatcgcacatattcatcaactaatgagtgtttaacacaatagaccataatttataatataatattaacctataataattgactattg 43444843  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  43444842 tcaatccataat 43444831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 323 - 413
Target Start/End: Original strand, 18888167 - 18888257
Alignment:
Q  323 aatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaa 413  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||    
T  18888167 aatcatacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattgtcaa 18888257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 37371399 - 37371503
Alignment:
Q  586 tttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||| ||||||| | |||| ||||| |||||||||| ||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  37371399 tttgtttaaaaaaacaaactttggtttttcaaatatatatcattaat-agttttattgaaaaatataagaataattgacaaagggtataattgataaatc 37371497  T
Q  685 gtaccc 690  Q
     |||||    
T  37371498 ataccc 37371503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 38434254 - 38434327
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||    
T  38434254 ttttcaaatatatagcactaattagttttattgaaaaatataagaataattgataaagggtataattgataaat 38434327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 633 - 689
Target Start/End: Complemental strand, 45666346 - 45666290
Alignment:
Q  633 agttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  45666346 agttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtacc 45666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 605 - 690
Target Start/End: Complemental strand, 23529591 - 23529504
Alignment:
Q  605 tttagttttc-aaatatataacatgaattagttttattgaaaaa-gataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| ||||| ||| ||| ||||||||||||||||||| ||||| | ||||||| ||| |||||||||||||||||||||||    
T  23529591 tttagttttccaaataaatagcattaattagttttattgaaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtaccc 23529504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 19443506 - 19443552
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19443506 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaaaaa 19443552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 41502685 - 41502639
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  41502685 tttgtttaaatctgaagataacaagaaacaaattttgttttaaaaaa 41502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 568 - 688
Target Start/End: Original strand, 46016561 - 46016684
Alignment:
Q  568 agataacaagaaacaaattttgttttaaaaaaccacctttagttttcaa---atatataacatgaattagttttattgaaaaagataagaataattgaca 664  Q
    ||||||||||||||||||||||||||  ||||  | ||||||||| | |   |||||||   | ||||||||| |||||||||||||||| ||||| |||    
T  46016561 agataacaagaaacaaattttgttttttaaaaaaaactttagtttaccatatatatatagttttaattagtttgattgaaaaagataagagtaattaaca 46016660  T
Q  665 aatggtataattgacaaatcgtac 688  Q
    |||| | |||| ||||||||||||    
T  46016661 aatgatgtaatcgacaaatcgtac 46016684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 21956497 - 21956577
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||  ||| || |||||||||||||||||||||||||| || |||| ||| | ||||| |||||||||||||||    
T  21956497 ttttcaaataggtaatattaattagttttattgaaaaagataagagtatttgagaaaagatataagtgacaaatcgtaccc 21956577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 456 - 667
Target Start/End: Complemental strand, 49263217 - 49263009
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntt 554  Q
    ||||| ||| ||||||||||||||||||||||||||  | ||||||||||||||||| ||||||  |||| ||| | |  |||| |  ||        ||    
T  49263217 tgttcttttactttacacttgaaatttttaacaattgctactcatcttatttatagaattttaatacttc-ttgtaactatattgtttataacaaaattt 49263119  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataaga 654  Q
    ||||||||||||||||| |||||||||||| ||| | || | |||| | ||||   || |||||| ||| ||| ||||||||||||||||||||||||||    
T  49263118 tgtttaaatttgaagatgacaagaaacaaagttt-tctttagaaacaaacttt--gttccaaatagatatcattaattagttttattgaaaaagataaga 49263022  T
Q  655 ataattgacaaat 667  Q
     ||||||| ||||    
T  49263021 gtaattgataaat 49263009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 631 - 690
Target Start/End: Original strand, 21342249 - 21342308
Alignment:
Q  631 ttagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| |||||    
T  21342249 ttagttttattgaaaaagataagagtaattaacaaatgatataattgataaatcataccc 21342308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 553 - 600
Target Start/End: Complemental strand, 46195897 - 46195850
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaac 600  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||    
T  46195897 tttgtttaaatttgaagataacaagaaacaaaattggttttaaaaaac 46195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 470 - 652
Target Start/End: Original strand, 47944335 - 47944516
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaag 569  Q
    ||||||||||||||||||||||  |  |||||||||||||| | |||||||||||| |  ||||||| || | ||        ||||||||||||| | |    
T  47944335 acacttgaaatttttaacaatttttattcatcttatttatataattttaactcttcttaaaaccattgtt-tgga-acaaaattttgtttaaatttta-g 47944431  T
Q  570 ataacaagaaacaaattttgtttt-aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataa 652  Q
    |||| |||| |||||||||||||| ||||||| | ||||| ||||| ||||| ||| ||| ||| ||||||||||||||||||||    
T  47944432 ataaaaagacacaaattttgttttaaaaaaacaaactttaattttctaaatagatagcattaataagttttattgaaaaagataa 47944516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 1821528 - 1821574
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  1821528 tttgtttaaatttgaagataacaataaacaaattttgtttaaaaaaa 1821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 578 - 687
Target Start/End: Original strand, 19443555 - 19443665
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| | ||||| ||||||| | ||||| |||| |||||| |||  || | ||||||||| | |||||||||| | ||||||||||| |||||||||    
T  19443555 aaacaaactatgtttaaaaaaacaaactttaatttttcaaatagatagtattacttagttttactaaaaaagataaaagtaattgacaaagggtataatt 19443654  T
Q  677 gacaaatcgta 687  Q
    |||||||||||    
T  19443655 gacaaatcgta 19443665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 619 - 688
Target Start/End: Original strand, 27650852 - 27650924
Alignment:
Q  619 atataacatgaattagttttattgaaaaagataagaa---taattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||| |||||||||||||||||| ||||| ||   ||||||||||||| ||||||||| |||||||||    
T  27650852 atataacattaattagttttattgaaaatgataataagagtaattgacaaatgatataattgataaatcgtac 27650924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 581 - 667
Target Start/End: Original strand, 38044911 - 38044997
Alignment:
Q  581 caaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||| ||||||||||||||  | ||||||||| |||||| |||| || ||||| ||||||||||||| ||||||  |||||||||||    
T  38044911 caaactttgttttaaaaaaaaaactttagtttccaaatagataatattaattaattttattgaaaaatataagagaaattgacaaat 38044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 604 - 688
Target Start/End: Complemental strand, 30913609 - 30913525
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||| |||| | ||||||| ||| ||||||||| ||||| |||||    
T  30913609 ctttagttttcgaaatatataacgttaattagttttattgaaaaacataa-agtaattgataaagggtataattcacaaaacgtac 30913525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 33367073 - 33367024
Alignment:
Q  19 ttttagtgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  33367073 ttttaatgtttagccatggatcactagatacaaattatagcatatcatca 33367024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 620 - 684
Target Start/End: Original strand, 46196822 - 46196887
Alignment:
Q  620 tataacatgaattagttttattgaaaaag-ataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||||| |||||||||||||||||||  |||||| |||||||||||| || |||||||||||||    
T  46196822 tataacattaattagttttattgaaaaaatataagagtaattgacaaatagtgtaattgacaaatc 46196887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 471 - 596
Target Start/End: Original strand, 53370249 - 53370375
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaag 569  Q
    ||||||||||||||||| || | | || |||||||||||||| |||||||| |||    |||||||||||||| |       ||| |||||||||| |||    
T  53370249 cacttgaaatttttaacgatgactacttatcttatttatagaattttaactattcaagtaaccattattataggtaacaaacttttgtttaaattttaag 53370348  T
Q  570 ataacaagaaacaaattttgttttaaa 596  Q
    |||| |||||||||| |||||||||||    
T  53370349 ataataagaaacaaactttgttttaaa 53370375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 24538240 - 24538284
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||    
T  24538240 tttgtttgaattcgaagataacaagaaacaaattttgttttaaaa 24538284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 37371344 - 37371384
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  37371344 tttaaatttgaagataacaagaaagaaattttgttttaaaa 37371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 614 - 690
Target Start/End: Complemental strand, 38045478 - 38045402
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||| ||| ||| ||||| ||||||||||| | |||||| ||||||| ||| ||||||||||| |||||||||||    
T  38045478 caaatagatagcattaattacttttattgaaagatataagagtaattgataaagggtataattgataaatcgtaccc 38045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 45666535 - 45666471
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccat 535  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||||||||| | |||||||    
T  45666535 cacttgaaaattttaacaattgttactcatcttatttatagaattttaactcttcttggaaccat 45666471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 55343892 - 55343848
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  55343892 tttgtttaaatttaaagataacatgaaacaaattttgttttaaaa 55343848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 557 - 599
Target Start/End: Original strand, 49299804 - 49299846
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  49299804 tttaaatttgaaaataacaagaaacaaattttgtttaaaaaaa 49299846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 24073999 - 24074068
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||| ||| |||| ||||||| |||||||||||||  | |||||||||||| |||| ||||||||||||    
T  24073999 tgttcttttactttgcacttgagatttttaacaattgttactcatcttatttctagaattttaactcttc 24074068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 604 - 688
Target Start/End: Complemental strand, 30912717 - 30912627
Alignment:
Q  604 ctttagttttcaaa---tatataacatgaattagttttattgaaaa--agataagaa-taattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||||||||   |||||||||  ||||||||||||||||||  | |||| || ||||||||||| ||||||||| |||||||||||    
T  30912717 ctttagttttcaaaatatatataacaataattagttttattgaaaacaaaataaaaagtaattgacaaagggtataattcacaaatcgtac 30912627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 473 - 538
Target Start/End: Original strand, 38434100 - 38434165
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattat 538  Q
    ||||||||||||||||| || | ||||| ||||||||||| |||||||||||| | |||| |||||    
T  38434100 cttgaaatttttaacaagtactactcatgttatttatagaattttaactcttcatggaactattat 38434165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 49299879 - 49299960
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaaga-taagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| |||||||  ||||||| |||||||||| | ||| | ||||| ||||| ||||||||||||||||| |||||    
T  49299879 ttttcaaatagataacattgattagttatattgaaaaaaaataaaagtaattaacaaagggtataattgacaaatcctaccc 49299960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 6949262 - 6949218
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||    
T  6949262 tttgtttcaatttgaagataacaagaaacaaactttgtttaaaaa 6949218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 19443432 - 19443480
Alignment:
Q  477 aaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||||||||||||||  | ||||||||||||||||| ||||||||||||    
T  19443432 aaatttttaacaattgttactcatcttatttatagaattttaactcttc 19443480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 24538162 - 24538214
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||| |||||    
T  24538162 cttgaaatttttaacaattactactcatgttatttatagaattttaagtcttc 24538214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 610 - 666
Target Start/End: Complemental strand, 33808943 - 33808887
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaa 666  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||| ||||| |||||    
T  33808943 ttttcaaatatataacattaattaattttattgaaaaatgtaagagtaattaacaaa 33808887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 610 - 654
Target Start/End: Complemental strand, 41502608 - 41502564
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  41502608 ttttcaaatatataacattaattaattttattaaaaaagataaga 41502564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 470 - 521
Target Start/End: Original strand, 1821447 - 1821498
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaact 521  Q
    ||||||||||||||||||||||  | ||||| ||||||||||| ||||||||    
T  1821447 acacttgaaatttttaacaattgttactcattttatttatagaattttaact 1821498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 466 - 525
Target Start/End: Complemental strand, 6949343 - 6949284
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||| |||||||||||||||||||||  | ||| ||||||||||||| |||||| |||||    
T  6949343 ctttgcacttgaaatttttaacaattgttactcttcttatttatagaattttaaatcttc 6949284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 33361922 - 33361879
Alignment:
Q  25 tgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||    
T  33361922 tgtttagccatcgatcactagatacaaattatagcatatcatca 33361879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 42567465 - 42567516
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||| || |||||||||||||| |||||||||| ||||||| |||||||||    
T  42567465 agtttaagggtttagccatggatcactagatacagattatagcatatcatca 42567516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 629 - 688
Target Start/End: Complemental strand, 46250092 - 46250033
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||| |||||||||||||||| ||||| ||||||  | |||| ||||||||||||    
T  46250092 aattagtttgattgaaaaagataagagtaattaacaaataatgtaatcgacaaatcgtac 46250033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 54256395 - 54256348
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggca 257  Q
    ||||| |||| |||| ||||||||||||||||||||| ||||||||||    
T  54256395 ttaaccgtctgatgggatgacgtttaaatagctaaactgctgagggca 54256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 38044764 - 38044834
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccatt 536  Q
    |||| |||||||||||||||||||||  |   ||||||||||||| | ||||||||||||||  |||||||    
T  38044764 ctttgcacttgaaatttttaacaatttctatccatcttatttatataattttaactcttcgtaaaaccatt 38044834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 53393477 - 53393431
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  53393477 tttgtttaaatttaaagataactagaaacaaactttgtttaaaaaaa 53393431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 630 - 683
Target Start/End: Complemental strand, 20782518 - 20782465
Alignment:
Q  630 attagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||||||| |||||| ||||||| |||  |||||||||| ||||    
T  20782518 attagttttattgaaaaatataagagtaattgagaaagtgtataattgaaaaat 20782465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 44160536 - 44160589
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcatcaat 70  Q
    ||||||||| ||||| || |||| | |||||||||||||||| |||||||||||    
T  44160536 agttttagtatttagtcagggatcattagatacaaattatagcatatcatcaat 44160589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 45666456 - 45666411
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaa 598  Q
    ||||||||||||| || ||||||||||||||| ||||||| |||||    
T  45666456 tttgtttaaatttcaaaataacaagaaacaaactttgtttaaaaaa 45666411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 3e-82; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 39032746 - 39032956
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39032746 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 39032845  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||     
T  39032846 gaaagaatagcccaatcacacatattcatcaactaattagtgcttaacagaatagaccata-attatattatgacattaacttataataattgattattg 39032944  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  39032945 tcaatccataat 39032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 221 - 417
Target Start/End: Original strand, 29960935 - 29961131
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29960935 atgggatgacgtttaaatagctaaacggctgagggcagagacctctcattgggtttagctaaatggtccaacccatcacggtccatttagaaagaatagt 29961034  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatcca 417  Q
     |||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||| ||||||||    
T  29961035 ccaatcacacatattcatcaactaattaatgcttaacacaatagaccataatttttattatgacattaacttataataattgattattgtcaatcca 29961131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 221 - 417
Target Start/End: Original strand, 30010140 - 30010336
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30010140 atgggatgacgtttaaatagctaaacggctgagggcagagacctctcattgggtttagctaaatggtccaacccatcacggtccatttagaaagaatagt 30010239  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatcca 417  Q
     |||||| |||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||| ||||||||    
T  30010240 ccaatcacacatattcatcaactaattaatgcttaacacaatagaccataatttttattatgacattaacttataataattgattattgtcaatcca 30010336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 32280786 - 32280986
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32280786 atgggatgacgtttaaatagctaaacggctgagggtagggacctctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 32280885  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
      ||||| |||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  32280886 caaatcacacatgttcatcaactaattagtgcttaatagaatagaccataatttatattatgacattaacttataataattgattattgtcaatccataa 32280985  T
Q  421 t 421  Q
    |    
T  32280986 t 32280986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 3469989 - 3469778
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  3469989 ttaaccgtctgatgggatgacgtttaaatagttaaacggctgagggcagggacctctcattgggcttcgctaaatggtccaaaccatcacggtccattta 3469890  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||     
T  3469889 gaaagaatagcccaatcacacatattcatcaattaattagtgcttaacacaatagaccataatttatattatgacattaacttatgataattgattattg 3469790  T
Q  410 tcaatccataat 421  Q
    ||||| ||||||    
T  3469789 tcaattcataat 3469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 19240517 - 19240728
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| || |||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  19240517 ttaaccgtctgatgggataacgtttaaatagttaaacggatgagggcagggacctctcattaggcttagctaaatggtccaatccatcacggtccattta 19240616  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||||||||| ||||||     
T  19240617 gaaagaatatctcaatcacacatattcatcaactaattagtgcttaacacaatataccataatttatattataacattaacttataataattgattattg 19240716  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  19240717 tcaatccataat 19240728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 31112517 - 31112306
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31112517 ttaaccgtctgatgggatgacgtttaaatagttaaacggctaagggcatggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 31112418  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  |||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||| ||||||     
T  31112417 gaaagaatagcccaatcacacttattcatcaactaattagtacttaacacaatagaccataatttatattatgatattaacttataataattgattattg 31112318  T
Q  410 tcaatccataat 421  Q
    |  |||||||||    
T  31112317 tagatccataat 31112306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 32285719 - 32285930
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||| | ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  32285719 ttaaccgtctgatgggatgacgtttaaattgttaaacggctgagggcagagacctctcattaggcttagctaaatggtccaacccatcacggtccattta 32285818  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
      || |||| |||||||| ||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||| |||||||||||| ||||||     
T  32285819 agaaaaataattcaatcacacatattcatcaactaattagtgtttaacagaataaaccataatttatattatgacattaacttataataattgattattg 32285918  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  32285919 tcaatccataat 32285930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 39039775 - 39039968
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  39039775 atgacgtttaaatagctaaacgactgagggcagg-acctctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagcccaat 39039873  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||||||||||||||| |||||| |||||||||||  |||||||||||||||| |||||||||| | |||||| ||||||||||||    
T  39039874 cacacatattcatcaactaattagtgtttaacagaatagaccata-attatattatgacattaacttataataactgattattgtcaatccataat 39039968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 41273102 - 41272891
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| |||||||   |||||||||||||| ||||| |||| ||||||||||    
T  41273102 ttaaccgtctaatgggatgacgtttaaatagataaacggctgagggcagggacctctcattaaacttagctaaatggttcaacctatcatggtccattta 41273003  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||   | ||||||||| ||||||     
T  41273002 gaaagaatagcacaatcatacatattcatcaactaattagtgcttaacacaatagaccataatttatattataacattttataataataattgattattg 41272903  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  41272902 tcaatccataat 41272891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 227 - 421
Target Start/End: Original strand, 45677907 - 45678101
Alignment:
Q  227 tgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatc 326  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  45677907 tgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttaggtaaatggtccaacccatcacggtctatttaaaaagaatagttcaatc 45678006  T
Q  327 atacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||| ||||||||||||| |  || ||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||  |||||||||||    
T  45678007 atacattttcatcaactaataaacgcataatacaatagaccatattataaattataacattaatttataataattgattattgccaatccataat 45678101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 229 - 377
Target Start/End: Original strand, 10626311 - 10626459
Alignment:
Q  229 acgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcat 328  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  10626311 acgtttaaatagctaaacggctgagggcagggaccactcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagcccaatcac 10626410  T
Q  329 acatattcatcaactaattagtgcttaacacaatagaccatagtttata 377  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  10626411 acatatccatctactaattagtgcttaacacaatagaccataatttata 10626459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 226 - 421
Target Start/End: Complemental strand, 38445767 - 38445572
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    |||||||||||||||||||||| | |||||||| ||| ||| ||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  38445767 atgacgtttaaatagctaaacgaccgagggcagagacctctaattggacttagctaaatggttcaacccatcacggttcatttagaaaaaatagttcaat 38445668  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || |||||||||||||||||||| ||||||||  ||||||||||| |||||||||||| |||| |||||||||||| |  ||| ||||||||||||    
T  38445667 cacacatattcatcaactaattaatgcttaactgaatagaccataatttatattatgatattaacttataataattgaacattgtcaatccataat 38445572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 149 - 366
Target Start/End: Complemental strand, 46612016 - 46611799
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    |||||| |||||||||||||||| || |||| ||| ||||||| | || | || ||||   ||||| |||| |||| |||||||||||||| ||||||||    
T  46612016 gagaggaataactaccctcattccgtttagcgttaagttttcagagtattgttgagaatgtttaaccgtctgatggcatgacgtttaaataactaaacgg 46611917  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||| |||| |||||||    
T  46611916 ctgagggcagtgacctcttattgggcttagctaaatggtccaactcatcacgatccatctagaaagaatagttcaatcacacatatttatcatctaatta 46611817  T
Q  349 gtgcttaacacaatagac 366  Q
    ||||||||||||||||||    
T  46611816 gtgcttaacacaatagac 46611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 281 - 421
Target Start/End: Original strand, 11172085 - 11172225
Alignment:
Q  281 aaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatatta 380  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  11172085 aaatgttccaacccatcacggtccatttagaaagaatagttcaatcacacatattcatcaactaattagtgcttatcagaatagaccataatttatatta 11172184  T
Q  381 tgacattagcttataataatttattattatcaatccataat 421  Q
    |||||||| |||||||||||| |||||| ||||||||||||    
T  11172185 tgacattaacttataataattgattattgtcaatccataat 11172225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 232 - 421
Target Start/End: Complemental strand, 50158290 - 50158101
Alignment:
Q  232 tttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcataca 331  Q
    |||||||||| ||||||||||||||| | || | ||||||  ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  50158290 tttaaatagccaaacggctgagggcatgaacctttcattgaacttagttaaatggtccaacccatcacggtccatttagaaataatagcacaatcataca 50158191  T
Q  332 tattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||||||||| ||||||||| ||| ||||||||| | || ||||| | ||||  ||||||||||| |||||| ||||||||||||    
T  50158190 tattcatcaactaatgagtgcttaatacagtagaccatattataaattataatattaatttataataattgattattgtcaatccataat 50158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 11458269 - 11458138
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  11458269 ttaaccgtctgatggtatgacgtttaaatagctaaacggctaagggcatggacctctcattgggcttagttaaatggtcaaatccatcacggtccattta 11458170  T
Q  310 gaaagaatagttcaatcatacatattcatcaa 341  Q
    |||| |||||| || | | |||||||||||||    
T  11458169 gaaacaatagtccagttacacatattcatcaa 11458138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 456 - 690
Target Start/End: Complemental strand, 20841539 - 20841309
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| |||||||||||||||||||||  | ||||||||||||||||| |||||||| ||| |  ||||||| ||   |         |||    
T  20841539 tgttcttttactttgcacttgaaatttttaacaattgttactcatcttatttatagaattttaacttttcttgaaaccattgttt--gtaacacaatttt 20841442  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||||||||| ||||||| |||||||||| ||||||| ||||||  || ||||||||| |||||| ||| ||| ||||||||||||||||||| |||||     
T  20841441 gtttaaatttaaagataataagaaacaaactttgtttaaaaaaaatac-tttagtttttcaaatagatagcattaattagttttattgaaaaaaataag- 20841344  T
Q  655 ataattgacaaatggtataattgacaaatcgtaccc 690  Q
     |||||||||||||||||||||||||||||||||||    
T  20841343 -taattgacaaatggtataattgacaaatcgtaccc 20841309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 455 - 690
Target Start/End: Complemental strand, 5493779 - 5493541
Alignment:
Q  455 atgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntt 554  Q
    |||||| ||| |||| |||||||| ||||||||||||  | ||||||||||||||||| |||||||| ||| |  ||||||| || ||          ||    
T  5493779 atgttcttttactttgcacttgaattttttaacaatttctactcatcttatttatagaattttaacttttcttacaaccattgtttta---acaaaattt 5493683  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgtttt-----aaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaag 648  Q
    ||||||||||||||||||| |||||||||| ||||||||     ||||||  |   |||||||| |||||| | ||||| ||||||||||||||||||||    
T  5493682 tgtttaaatttgaagataataagaaacaaactttgtttttaaaaaaaaaaaaaaaattagtttttcaaatagacaacattaattagttttattgaaaaag 5493583  T
Q  649 ataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  5493582 ataagagtaattgacaaagggtataattgacaaatcgtaccc 5493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 573 - 689
Target Start/End: Complemental strand, 19578440 - 19578321
Alignment:
Q  573 acaagaaacaaattttgttttaaaaaa--ccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatgg 669  Q
    |||||||||||| ||||||||||||||  | | |||| |||||| ||||||||||||| ||||||||||||||||||||| ||||  |||||||||| ||    
T  19578440 acaagaaacaaactttgttttaaaaaaaacaaacttttgttttctaaatatataacattaattagttttattgaaaaagacaagagcaattgacaaaggg 19578341  T
Q  670 tataattgacaaatcgtacc 689  Q
    ||||||||||||||||||||    
T  19578340 tataattgacaaatcgtacc 19578321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 553 - 689
Target Start/End: Complemental strand, 45646730 - 45646589
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacc----tttagtttt-caaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||||| |||||||| |||||||| ||||||| ||||||| | |    ||||||||| |||||| ||| ||| |||||||||||||||||||    
T  45646730 tttgtttaaatttgcagataacaggaaacaaactttgtttaaaaaaacaaacaaactttagtttttcaaatagatagcattaattagttttattgaaaaa 45646631  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    || || | ||||||||||| ||||||||||||||||||||||    
T  45646630 gaaaaaagtaattgacaaagggtataattgacaaatcgtacc 45646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 470 - 690
Target Start/End: Complemental strand, 2093993 - 2093764
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaag 569  Q
    ||||||||||||||||||||||  | ||||||||||||||| | |||||||||||| | ||||||||||| ||||        || ||||||||||||||    
T  2093993 acacttgaaatttttaacaattgttactcatcttatttataaaattttaactcttcttggaaccattatt-taga-acaaaatttagtttaaatttgaag 2093896  T
Q  570 ataacaagaaacaaattttgtttt----------aaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataa 658  Q
    ||||||||||||||| ||||||||          ||||||  | |||||| |||||||||| ||| ||| ||||| ||| | |||||||||||| | |||    
T  2093895 ataacaagaaacaaactttgtttttaaaaaaaaaaaaaaaaaaactttagtttttcaaatagatagcattaattaatttgactgaaaaagataaaagtaa 2093796  T
Q  659 ttgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||| ||||||||||||||||| |||||    
T  2093795 ttgacaaagggtataattgacaaatcataccc 2093764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 553 - 688
Target Start/End: Complemental strand, 34668809 - 34668672
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||||| |||||||||| ||||||||||||||| | |||| ||  ||||||||||| ||||| ||| ||| ||||||||||||| ||||| |     
T  34668809 tttgtttaaatttaaagataacaaaaaacaaattttgtttaagaaaaacatactttagttttccaaatagatagcattaattagttttattcaaaaaaaa 34668710  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtac 688  Q
    || | ||||||||||| |||||||||||||||||||||    
T  34668709 aaaagtaattgacaaagggtataattgacaaatcgtac 34668672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 473 - 687
Target Start/End: Original strand, 37030853 - 37031061
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaagata 572  Q
    ||||||||||||||||||| || ||||||||| |||| || |||||||||||| | |||||||| ||   |         ||||||||||||||||||||    
T  37030853 cttgaaatttttaacaattgatactcatcttagttatcgaattttaactcttcttggaaccattgttt--gtaacaaaattttgtttaaatttgaagata 37030950  T
Q  573 acaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtat 672  Q
    |||||||||||| ||||||| ||||||  | || |   || |||||| ||| ||| |||||||||||||||||||| ||| | |||||| |||| |||||    
T  37030951 acaagaaacaaactttgtttaaaaaaa--aactgtg--ttccaaatagatagcattaattagttttattgaaaaagctaaaagtaattggcaaagggtat 37031046  T
Q  673 aattgacaaatcgta 687  Q
    |||||||||||||||    
T  37031047 aattgacaaatcgta 37031061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 471 - 599
Target Start/End: Complemental strand, 296666 - 296539
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaaga 570  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||| ||| | |||||||||||||| |        ||||||||||||| ||||    
T  296666 cacttgaaatttttaacaattactactcatcttatttatagaattttaactattcatagaaccattattatata-acaaaattttgtttaaattttaaga 296568  T
Q  571 taacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||| || ||||||||||||||    
T  296567 taacaagaaacgaaatttgttttaaaaaa 296539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 456 - 683
Target Start/End: Original strand, 15638347 - 15638575
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| ||| ||| |||||||||||||| | ||||||||||||  ||| |||||||| ||| |  |||||||||||||| |       |||    
T  15638347 tgttcttttactttgcacatgatatttttaacaattactactcatcttattttaagaattttaactattcatgaaaccattattataggtaacaaaattt 15638446  T
Q  556 -gtttaaatttgaagataacaagaaacaaattttgtttt--aaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataa 652  Q
     |||| ||||| |||||||||||||||||| ||||||||  ||||||| | |||| | || |||||||| ||||| ||| |||||||| |||||||  ||    
T  15638447 tgtttgaattttaagataacaagaaacaaactttgtttttaaaaaaacaaacttttgattgcaaatataaaacattaataagttttatggaaaaag--aa 15638544  T
Q  653 gaataattgacaaatggtataattgacaaat 683  Q
    || ||||||| ||| ||||||||||||||||    
T  15638545 gattaattgataaagggtataattgacaaat 15638575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 25841918 - 25842031
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| |  |||||||||| ||||||||| ||| ||||||||||||||||||| |||||| ||||||||||| ||||| |||    
T  25841918 aaacaaactttgtttaaaaaaacaaattttagttttccaaatatatagcattaattagttttattgaaaaatataagattaattgacaaagggtatgatt 25842017  T
Q  677 gacaaatcgtaccc 690  Q
    |||||||| |||||    
T  25842018 gacaaatcataccc 25842031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 561 - 683
Target Start/End: Original strand, 54675151 - 54675271
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataat 659  Q
    ||||| |||||||||||||||||| ||||||||||||||  | |||||| ||||||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  54675151 aatttaaagataacaagaaacaaactttgttttaaaaaa--aactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaat 54675247  T
Q  660 tgacaaatggtataattgacaaat 683  Q
      ||||| ||||||||||| ||||    
T  54675248 caacaaagggtataattgataaat 54675271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 466 - 645
Target Start/End: Complemental strand, 3751681 - 3751492
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntttgtttaaatt 564  Q
    |||| ||||| |||||||||| ||||| | ||||||||||||||||| |||||||||||| |  |||||||||||||| |        ||||||||||||    
T  3751681 cttttcacttcaaatttttaaaaattactactcatcttatttatagaattttaactcttcatgaaaccattattataggtaagaaaattttgtttaaatt 3751582  T
Q  565 tgaagataacaagaaacaaattttgt-------ttta-aaaaaccaccttta-gttttcaaatatataacatgaattagttttattgaaa 645  Q
    | |||||||||||||||||| |||||       |||| |||||| | ||||| |||| |||||||||||||| |||||||||||||||||    
T  3751581 taaagataacaagaaacaaactttgtttctttgtttagaaaaacaaactttaggtttccaaatatataacattaattagttttattgaaa 3751492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 553 - 652
Target Start/End: Original strand, 44940825 - 44940926
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacc--acctttagttttcaaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |  || || | |||||||||||||| ||| ||||||||||||| ||||||||    
T  44940825 tttgtttaaatctgaaaataacaagaaacaaattttgttttaaaaaaacaaactttaatttttcaaatatatagcattaattagttttattaaaaaagat 44940924  T
Q  651 aa 652  Q
    ||    
T  44940925 aa 44940926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 454 - 684
Target Start/End: Complemental strand, 375971 - 375740
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| |||  ||| |||||||||||||||||||||| | ||||| ||||||||| | |||||||| |||    || ||||||||||| |       |    
T  375971 tatgttcttttattttgcacttgaaatttttaacaattactgctcattttatttataaaattttaactattc----aatcattattataggtaacaaaat 375876  T
Q  554 tt-gtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacc-tttagttttc-aaatatataa--catgaattagttttattgaaaaag 648  Q
    || ||| |||||| | |||||||||||||||| ||||||| |||||| ||   |||| ||||| ||||||||||  ||| ||||| ||||||| ||||||    
T  375875 tttgttaaaattttaggataacaagaaacaaactttgtttaaaaaaaacaaaatttaattttccaaatatataaagcattaattaattttattaaaaaag 375776  T
Q  649 ataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||| ||||||||||| | ||||||| |||||||    
T  375775 ataagagtaattgacaaaagatataattaacaaatc 375740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 578 - 690
Target Start/End: Complemental strand, 9588847 - 9588733
Alignment:
Q  578 aaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataat 675  Q
    ||||||| ||||||| |||||| ||  ||||||||||| ||||||||||||| |||||||||| ||||||||||||  | ||||||||||| ||||||||    
T  9588847 aaacaaactttgtttaaaaaaaacaaactttagttttccaaatatataacattaattagtttttttgaaaaagatattagtaattgacaaagggtataat 9588748  T
Q  676 tgacaaatcgtaccc 690  Q
    ||| ||||| |||||    
T  9588747 tgataaatcataccc 9588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 604 - 688
Target Start/End: Original strand, 633294 - 633379
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| | | |||||| ||||||||||    
T  633294 ctttagttttccaaatatataacattaattagttttattgaaaatgataagagtaattgacaaaggatgtaattgtcaaatcgtac 633379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 605 - 689
Target Start/End: Original strand, 25342389 - 25342474
Alignment:
Q  605 tttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    |||||||||| ||||||||||||| ||||||||||||| |||| ||||| | ||||||||||| | ||||||||||||||||||||    
T  25342389 tttagttttccaaatatataacattaattagttttattaaaaacgataaaagtaattgacaaaggatataattgacaaatcgtacc 25342474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 45759970 - 45760043
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| ||| ||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  45759970 ttttcaaatagatagcattaattagttttattgagaaagataagagtaattgacaaagggtataattgacaaat 45760043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 21959582 - 21959707
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagat 571  Q
    ||||||||||||||||| || | ||||| ||||||||||| |||||||||||| | |||| ||||| |||| |       ||| ||||||||||||||||    
T  21959582 cttgaaatttttaacaagtactactcatgttatttatagaattttaactcttcatggaactattatcataggtaacaacattttgtttaaatttgaagat 21959681  T
Q  572 aacaagaaacaaattttgttttaaaa 597  Q
    ||||| |||| |||||||||||||||    
T  21959682 aacaataaactaattttgttttaaaa 21959707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 629 - 684
Target Start/End: Complemental strand, 27264162 - 27264107
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27264162 aattaattttattgaaaaagataagagtaattgacaaatggtataattgacaaatc 27264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 575 - 681
Target Start/End: Original strand, 20140992 - 20141098
Alignment:
Q  575 aagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataa 674  Q
    |||||||||| ||||||| | ||||  || || | |||| ||||| ||||||| |||| ||||||||||||||||||||| ||||||| ||| |||||||    
T  20140992 aagaaacaaactttgtttaagaaaaaaactttaattttttaaatacataacattaatttgttttattgaaaaagataagagtaattgagaaaaggtataa 20141091  T
Q  675 ttgacaa 681  Q
    |||||||    
T  20141092 ttgacaa 20141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 553 - 684
Target Start/End: Original strand, 2440613 - 2440741
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagata 651  Q
    ||||||||||||| || | ||||| ||||||| ||||||| ||||||  | |||||||||| ||||||||||  || ||||| |||||||||||| ||||    
T  2440613 tttgtttaaattttaaaa-aacaacaaacaaactttgtttaaaaaaa--aactttagtttttcaaatatatataattaattaattttattgaaaa-gata 2440708  T
Q  652 agaataattgacaaatggtataattgacaaatc 684  Q
    | | ||||||||||| |||||||||||||||||    
T  2440709 aaactaattgacaaagggtataattgacaaatc 2440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 604 - 690
Target Start/End: Complemental strand, 296510 - 296422
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaa-gataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| ||||||||| ||| |||||||||||| |||||| ||||||| ||||||||||| ||||||| ||||||||| |||||    
T  296510 ctttagttttccaaatatatagcataaattagttttatagaaaaaagataagagtaattgacaaagggtataactgacaaatcataccc 296422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 615 - 690
Target Start/End: Complemental strand, 1272489 - 1272414
Alignment:
Q  615 aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||| ||| ||||||||||||||||||| |||||| ||||||||||| |||||| |||| ||||| |||||    
T  1272489 aaatatatagcattaattagttttattgaaaaatataagagtaattgacaaagggtatagttgaaaaatcataccc 1272414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 457 - 600
Target Start/End: Complemental strand, 9588992 - 9588848
Alignment:
Q  457 gttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt- 555  Q
    |||| ||| |||| |||||||||||||||| ||||  | ||||||||||||||| | |||||||| ||| |  || ||||||||||| |       |||     
T  9588992 gttcttttactttgcacttgaaatttttaataattcctactcatcttatttatataattttaactattcatgaaatcattattataggtaacaaagtttt 9588893  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaaaaaac 600  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||    
T  9588892 gtttaaattttaagataacaagaaacaaactttgttttataaaac 9588848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 23272122 - 23272051
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaa 681  Q
    |||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| |||  |||||||||||||    
T  23272122 tttttaaatatatagcattaatttgttttattgaaaaagataagaataattgagaaaatgtataattgacaa 23272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 630 - 689
Target Start/End: Complemental strand, 27817464 - 27817406
Alignment:
Q  630 attagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  27817464 attagttttattgaaaaagataa-aataattgacaaaaggtataattgacaaaccgtacc 27817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 614 - 684
Target Start/End: Original strand, 19234012 - 19234082
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||||||| ||| ||||  |||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  19234012 caaatatatagcattaattttttttattgaaaaagataagagtaattgacaaagggtataattgaaaaatc 19234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 592
Target Start/End: Original strand, 38750952 - 38751086
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattata-gatnnnnnnntt 554  Q
    ||||| ||| |||||||||||||||||||||||||||    || ||||||||||||| |||||||||||| |  || |||||||||| |         ||    
T  38750952 tgttcttttactttacacttgaaatttttaacaatta---ttcgtcttatttatagaattttaactcttcataaaatcattattatatgtaacaaaattt 38751048  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttt 592  Q
    ||||||||| || |||||||||||||||||||||||||    
T  38751049 tgtttaaatctgtagataacaagaaacaaattttgttt 38751086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 614 - 667
Target Start/End: Original strand, 7259726 - 7259779
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  7259726 caaatatatagcattaattagttttattgaaaaatataagaataattgacaaat 7259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 609 - 690
Target Start/End: Original strand, 21959699 - 21959779
Alignment:
Q  609 gttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||| ||||||||||||  ||||||||||| ||||||  |||||||||||||||||| ||||||||||| ||||| |||||    
T  21959699 gttttaaaatatataacactaattagttttaatgaaaat-ataagaataattgacaaagggtataattgataaatcataccc 21959779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 39350996 - 39350935
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattg 271  Q
    ||||| |||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  39350996 ttaaccgtctgatgggatgacgtttaaatagctaaacggttgagggcagggacctctcattg 39350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 7259646 - 7259690
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  7259646 tttgtttaaatttgaagataataagaaacaaattttgttttaaaa 7259690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 27817651 - 27817596
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  27817651 acacttgaaatttttaacaattaccactcatcttatttatagaattttaactcttc 27817596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 471 - 593
Target Start/End: Original strand, 6512437 - 6512560
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntttgtttaaatttgaag 569  Q
    ||||||||||||||||||| || | ||||||||||||||| | | |||||||||| |  |||||||||||||| |        ||||| ||||||||| |    
T  6512437 cacttgaaatttttaacaactactcctcatcttatttataaaatgttaactcttcatgaaaccattattataggtaacaaaattttgtataaatttgagg 6512536  T
Q  570 ataacaagaaacaaattttgtttt 593  Q
    ||||||||||||||| ||| ||||    
T  6512537 ataacaagaaacaaactttttttt 6512560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 585 - 654
Target Start/End: Original strand, 21934474 - 21934544
Alignment:
Q  585 ttttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||||||| ||||||| | ||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  21934474 ttttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattaaaaaagataaga 21934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 553 - 652
Target Start/End: Original strand, 23701901 - 23702005
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt--aaaaaaccacctttag-ttttcaa--atatataacatgaattagttttattgaaaaa 647  Q
    ||||||||||||| |||||||||  ||||||||||||||||  ||||||  | |||||| |||||||  |||||||||||  ||||||||||||||||||    
T  23701901 tttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaaaaa 23702000  T
Q  648 gataa 652  Q
     ||||    
T  23702001 tataa 23702005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 470 - 524
Target Start/End: Complemental strand, 45667661 - 45667607
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    ||||||||||||||||||||||  | ||||||||||||||||| |||||||||||    
T  45667661 acacttgaaatttttaacaattgttactcatcttatttatagaattttaactctt 45667607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 10614649 - 10614588
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||| |||||    
T  10614649 aattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttaccc 10614588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 11457334 - 11457260
Alignment:
Q  345 attagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||||||||||| | ||||||||| |||||||||  | |||| |||||||||||| |||||| ||||||||||||    
T  11457334 attagtgcttaacatagtagaccataatttatatta--atattaacttataataattgattattttcaatccataat 11457260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 29556519 - 29556592
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| | |||||   |||||||||||||||||||||||| ||||||| |||| |||||||||| ||||    
T  29556519 ttttcaaatagagaacatttgttagttttattgaaaaagataagagtaattgagaaattgtataattgataaat 29556592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 629 - 689
Target Start/End: Complemental strand, 1405276 - 1405216
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||| ||||| ||||| || ||| |||||||||||||||||||||||||||| |||||    
T  1405276 aattagtgttatttaaaaatattagagtaattgacaaatggtataattgacaaattgtacc 1405216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 652
Target Start/End: Original strand, 23720356 - 23720461
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt---aaaaaaccacctttag-ttttcaa--atatataacatgaattagttttattgaaaa 646  Q
    ||||||||||||| |||||||||  ||||||||||||||||   ||||||  | |||||| |||||||  |||||||||||  |||||||||||||||||    
T  23720356 tttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaaaa 23720455  T
Q  647 agataa 652  Q
    | ||||    
T  23720456 atataa 23720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 652
Target Start/End: Original strand, 23738812 - 23738917
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt---aaaaaaccacctttag-ttttcaa--atatataacatgaattagttttattgaaaa 646  Q
    ||||||||||||| |||||||||  ||||||||||||||||   ||||||  | |||||| |||||||  |||||||||||  |||||||||||||||||    
T  23738812 tttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaaaa 23738911  T
Q  647 agataa 652  Q
    | ||||    
T  23738912 atataa 23738917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 660
Target Start/End: Original strand, 23772197 - 23772312
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt-----aaaaaaccacctttag-ttttcaa--atatataacatgaattagttttattgaa 644  Q
    ||||||||||||| |||||||||  ||||||||||||||||     ||||||  | |||||| |||||||  |||||||||||  |||||||||||||||    
T  23772197 tttgtttaaatttaaagataacattaaacaaattttgtttttaaaaaaaaaaaaaactttagtttttcaaatatatataacatttattagttttattgaa 23772296  T
Q  645 aaagataagaataatt 660  Q
    ||| |||||| |||||    
T  23772297 aaatataagagtaatt 23772312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 25841871 - 25841911
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  25841871 tttaaatttgaagataacaaaaaacaaattttgttttaaaa 25841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 21934392 - 21934458
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||| ||| |||| ||||||||||||||||||||||    |||||||||||||||| ||||||||||||    
T  21934392 tgttcatttactttgcacttgaaatttttaacaatta---ttcatcttatttatagaattttaactcttc 21934458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 558 - 667
Target Start/End: Complemental strand, 45667578 - 45667467
Alignment:
Q  558 ttaaatttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaa 655  Q
    |||||||| |||| |||||||| |||| ||||||| |||||| ||  |||| |||||| ||||| ||| ||| ||||| |||||||||||||||| | |     
T  45667578 ttaaattttaagaaaacaagaatcaaactttgtttaaaaaaaacaaactttcgttttccaaatagatagcattaattaattttattgaaaaagatcaaag 45667479  T
Q  656 taattgacaaat 667  Q
    ||||||||||||    
T  45667478 taattgacaaat 45667467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 466 - 591
Target Start/End: Original strand, 45759798 - 45759921
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaattt 565  Q
    |||| |||||||||| ||||||||||  | ||||||||||||||| | |||||||||||| | |||||||| |||   ||       |||||||||||||    
T  45759798 ctttgcacttgaaatatttaacaattgctactcatcttatttatacaattttaactcttcttggaaccattgttagtaat--gaaattttgtttaaattt 45759895  T
Q  566 gaagataacaagaaacaaattttgtt 591  Q
     ||||||||||||||| || ||||||    
T  45759896 aaagataacaagaaacgaactttgtt 45759921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 2599187 - 2599141
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  2599187 tttgtttaaatttaaagataacaagaaacaaactttgtttaaaaaaa 2599141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 557 - 667
Target Start/End: Original strand, 16237552 - 16237662
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaat 656  Q
    ||||||||||||||| |||| ||| ||| ||||||| ||||||  |  || | ||| |||||| ||| ||| |||||| |||||||||||| |||| | |    
T  16237552 tttaaatttgaagattacaaaaaaaaaactttgtttaaaaaaaaaaaattaattttccaaatagatagcattaattagctttattgaaaaatataatagt 16237651  T
Q  657 aattgacaaat 667  Q
    |||||||||||    
T  16237652 aattgacaaat 16237662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 471 - 524
Target Start/End: Original strand, 6472605 - 6472658
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    ||||||||||||||||||| || | ||||||||||||||| | |||||||||||    
T  6472605 cacttgaaatttttaacaactactactcatcttatttataaaattttaactctt 6472658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 6749198 - 6749145
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    ||||||||||||||||||| || | ||||||||||||||| | |||||||||||    
T  6749198 cacttgaaatttttaacaactactactcatcttatttataaaattttaactctt 6749145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 19187682 - 19187755
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||  |||| |||| |  |||||||| ||||||    
T  19187682 ttttcaaatatatatcattaattagttttattgaaaaaaataagtgtaatcgacacagagtataatttacaaat 19187755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 45677709 - 45677757
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    |||||||||||||| |||||||| | |||||||||||||||| ||||||    
T  45677709 agttttagtgtttacccatggatcattagatacaaattatagtatatca 45677757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 610 - 648
Target Start/End: Complemental strand, 25479657 - 25479619
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaag 648  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  25479657 ttttcaaatatataacattaattagtttgattgaaaaag 25479619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 614 - 648
Target Start/End: Complemental strand, 25485872 - 25485838
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaag 648  Q
    |||||||||||||| ||||||||||||||||||||    
T  25485872 caaatatataacatcaattagttttattgaaaaag 25485838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 471 - 521
Target Start/End: Original strand, 42735487 - 42735537
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaact 521  Q
    |||||||||||| |||||||| || ||||||||||||||||| | ||||||    
T  42735487 cacttgaaatttctaacaattgatactcatcttatttatagaatcttaact 42735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 21915671 - 21915603
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgt 527  Q
    ||||| ||| |||| ||||||||||||||| |||||| ||   ||||||| |||||| ||||||||||||||    
T  21915671 tgttcttttactttgcacttgaaatttttagcaattattt---atcttatctatagaattttaactcttcgt 21915603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 1e-81; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 210 - 420
Target Start/End: Complemental strand, 39574632 - 39574422
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39574632 ttaaccgtctgatgggatgacgtttaaatagctaaacggctaagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 39574533  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |     
T  39574532 gaaagaatagcccaatcacacatattcatcaactaattagtgcttaacacaatagaccataatttatattatgacattaacttataataattgattactg 39574433  T
Q  410 tcaatccataa 420  Q
    ||||| |||||    
T  39574432 tcaattcataa 39574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 24515367 - 24515564
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| |||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  24515367 atgggatgacgtttaaatagctaaatggctgagggcagagacctctcattggacttagctaaatggtccaacccatcacggtccatttagaaagaatagc 24515466  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     | |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||   ||||||||||| |||||| |||||||||||    
T  24515467 ccgatcacacatattcatcaactaattagtgcttaacacaatagaccataatttatattataacatt---ttataataattgattattgtcaatccataa 24515563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 211 - 421
Target Start/End: Complemental strand, 41141010 - 41140800
Alignment:
Q  211 taactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttag 310  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||     
T  41141010 taaccgtctaatgggatgacgtttaaatagctaaacggctgagggcagggacctctcatcaggcttagctaaatggtccaacccatcacggtccatttaa 41140911  T
Q  311 aaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattat 410  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| |||||   | ||||||||| |||||| |    
T  41140910 aaagaatagaccaatcatacatattcatcaactaattaatgcttaacataatagaccataatttatattataacattttataataataattgattattgt 41140811  T
Q  411 caatccataat 421  Q
    |||||||||||    
T  41140810 caatccataat 41140800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 9764989 - 9765189
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  9764989 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccatttataaagaatagc 9765088  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     ||||||||||||||||||||||||| ||||||||| ||| ||||||||| | || ||||| ||||||  ||||||||||| ||||||   |||||||||    
T  9765089 ccaatcatacatattcatcaactaatgagtgcttaatacagtagaccatattataaattataacattaatttataataattgattattgaaaatccataa 9765188  T
Q  421 t 421  Q
    |    
T  9765189 t 9765189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 221 - 421
Target Start/End: Complemental strand, 47858234 - 47858034
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||     
T  47858234 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccattacgatcaatttagaaagaatagc 47858135  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
    |||||||||||||||||||||||||| |||| |||| ||||||||||||| | || ||||| ||||||  ||||  ||||| |||||| |||||| ||||    
T  47858134 tcaatcatacatattcatcaactaatgagtgtttaatacaatagaccatattataaattataacattaatttattttaattgattattgtcaatctataa 47858035  T
Q  421 t 421  Q
    |    
T  47858034 t 47858034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 210 - 370
Target Start/End: Original strand, 9758363 - 9758523
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  9758363 ttaaccgtctgatgggatgacgtttaaatagctaaatggctgaaggcagtgacctctcattgggcttagctaaatgttccaacccatcacggtccattta 9758462  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccata 370  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  9758463 gaaagaatagcccaatcatacatattcatcaactaatgagtgcttaatacagtagaccata 9758523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 454 - 690
Target Start/End: Original strand, 1674623 - 1674867
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||| |||| ||||||||||||||||||| || | ||||||||||||||||| |||||||| ||| | |||||||||| ||||||       |    
T  1674623 tatgttcttttactttgcacttgaaatttttaacaagtattactcatcttatttatagaattttaacttttcatggaaccattatcatagataacaaaat 1674722  T
Q  554 ttg-tttaaatttgaagataacaagaaacaaattttgttttaaaa-------aaccacctttagtttt-caaatatataacatgaattagttttattgaa 644  Q
    ||  |||||||||||||||||||||||||||||||| ||||||||       ||| | |||||||||| |||||||||||||| ||||||||||||||||    
T  1674723 tttatttaaatttgaagataacaagaaacaaattttattttaaaaccaaaaaaacaaactttagtttttcaaatatataacattaattagttttattgaa 1674822  T
Q  645 aaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||    
T  1674823 aaatataagaataattgacaaa-ggtataattgacaaatcgtaccc 1674867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 210 - 377
Target Start/End: Original strand, 12017733 - 12017899
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||||||||  || ||||| ||||||||||||||||||| ||||||||||||||||    
T  12017733 ttaactgtctgatgggatgacgtttaaatagttaaacggctgagggcagggac--cttattggacttagctaaatggtccaactcatcacggtccattta 12017830  T
Q  310 gaaa-gaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttata 377  Q
    |||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  12017831 gaaaagaataattcaatcagacatattcatcaactaattagtgtttaacacaatagatcataatttata 12017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 553 - 690
Target Start/End: Complemental strand, 2655844 - 2655702
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaacc----acctttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||||||||||||||||||||||||||||||||||||||      | ||||||||||| ||||||||||||| |||||||||||||||||||    
T  2655844 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaataaaaactttagttttccaaatatataacattaattagttttattgaaaaa 2655745  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
     |||||| ||||||||||||||||||||||| |||||||||||    
T  2655744 tataagagtaattgacaaatggtataattgataaatcgtaccc 2655702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 553 - 689
Target Start/End: Original strand, 36319926 - 36320067
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa----ccacctttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||    | | | ||||||||| ||||| ||| ||| |||||||||||||||||||    
T  36319926 tttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaaaaaacaaacattagttttccaaatagatagcattaattagttttattgaaaaa 36320025  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  36320026 gataagagtaattgacaaatggtataattgacaaatcgtacc 36320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 226 - 327
Target Start/End: Complemental strand, 39581165 - 39581064
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||    
T  39581165 atgacgtttaaatagctaaacgactgagggcagggacctctcattgggcttagctaaattgttcaactcatcacggtccatttagaaagaatatttcaat 39581066  T
Q  326 ca 327  Q
    ||    
T  39581065 ca 39581064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 24523172 - 24523266
Alignment:
Q  276 tagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccata 370  Q
    |||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24523172 tagctaaatggtccaacccatcacggtccatttaaaaagaatagaccaatcacacatattcatcaattaattagtgcttaacacaatagaccata 24523266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 557 - 690
Target Start/End: Original strand, 13254723 - 13254858
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaa-aaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||  | |||||||| || ||||| ||| ||| ||||||||||||||||||||||||||    
T  13254723 tttaaatttgaagataataagaaacaaattttgtttaaaaataataaactttagttctccaaatagatagcattaattagttttattgaaaaagataaga 13254822  T
Q  655 ataattgacaaatggtataattgacaaatcgtaccc 690  Q
     ||||||| ||| |||||||||||||||||||||||    
T  13254823 gtaattgataaaaggtataattgacaaatcgtaccc 13254858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 39580527 - 39580437
Alignment:
Q  331 atattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  39580527 atattcatcaactaattagtacttaacacaatagaccataatttatattatgacattaacttataataattgattattgtcaatccataat 39580437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 585 - 684
Target Start/End: Original strand, 788278 - 788378
Alignment:
Q  585 ttttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  788278 ttttgttttaaaaaacaaactttatttttccaaatatataacattaattagttttattgaaaaatattagaataattgacaaatggtataattgataaat 788377  T
Q  684 c 684  Q
    |    
T  788378 c 788378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 454 - 683
Target Start/End: Original strand, 31622959 - 31623203
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnn- 552  Q
    ||||||| ||| |||||||||||||||||||||||| ||   ||||||||||||||| | |||||||||||| | |||  |||||||||| |            
T  31622959 tatgttcttttactttacacttgaaatttttaacaagtaccactcatcttatttataaaattttaactcttcatggaattattattatagttaacaaaaa 31623058  T
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-------------aaccacctttagttttc-aaatatataacatgaattagtttt 638  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||             ||| |  |||||||||| ||||||||||||| ||||| ||||    
T  31623059 tttgtttaaatttaaagataagaagaaacaaattttgttttaaaacaaaacttaaaaaaacaaattttagttttcgaaatatataacattaattaatttt 31623158  T
Q  639 attgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    || |||||| |||||||||||||| ||| ||||||||||| ||||    
T  31623159 atggaaaaatataagaataattgataaagggtataattgataaat 31623203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 553 - 654
Target Start/End: Complemental strand, 52415068 - 52414965
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt-taaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||| ||||||||| ||||||||||||||||||  ||||||| | |||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  52415068 tttgtttaaatctgaagataagaagaaacaaattttgtttaaaaaaaacaaactttagttttccaaatatataacattaattagttttattaaaaaagat 52414969  T
Q  651 aaga 654  Q
    ||||    
T  52414968 aaga 52414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 610 - 688
Target Start/End: Complemental strand, 43021202 - 43021124
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||||    
T  43021202 ttttcaaatatataacattaattagttttattgataaatataagagtaattggcaaatggtataattgacaaatcgtac 43021124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 11238231 - 11238344
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||  |  |||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||| |||| ||||||| |    
T  11238231 aaacaaactttgtttaaaaaaataaattttagttttccaaatatatatcattaattagttttattgaaaaatataagaataattgccaaagggtataact 11238330  T
Q  677 gacaaatcgtaccc 690  Q
    ||||||||||||||    
T  11238331 gacaaatcgtaccc 11238344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 553 - 654
Target Start/End: Complemental strand, 32769124 - 32769020
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttg--ttttaaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaaga 649  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||  | |||||| |||||||||||||| ||| ||||||||||||| |||||||    
T  32769124 tttgtttaaatatgaagataacaagaaacaaattttgttttttaaaaaataaactttagtttttcaaatatatatcattaattagttttattaaaaaaga 32769025  T
Q  650 taaga 654  Q
    |||||    
T  32769024 taaga 32769020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 6295707 - 6295846
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt-taaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||  |   |||| |||||||||| ||| ||| ||||||||||||| ||||||||    
T  6295707 tttgtttaaatttgaagataacaagaaacaaattttgtttaaaaaaaaaaaaaattagtttttcaaatagatagcattaattagttttatttaaaaagat 6295806  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    || | ||| ||||||| ||||||||| | |||||| ||||    
T  6295807 aaaagtaagtgacaaagggtataattaataaatcgcaccc 6295846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 583 - 681
Target Start/End: Original strand, 10430513 - 10430612
Alignment:
Q  583 aattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaa 681  Q
    |||||||||| |||| || | ||| |||||| |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10430513 aattttgtttaaaaatacaaacttgagttttgcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaatggtataattgacaa 10430612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 570 - 690
Target Start/End: Complemental strand, 3901130 - 3901011
Alignment:
Q  570 ataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatg 668  Q
    ||||||||||||||| ||||||||||||||  || ||||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||  ||||| |    
T  3901130 ataacaagaaacaaactttgttttaaaaaaaaac-tttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagg 3901033  T
Q  669 gtataattgacaaatcgtaccc 690  Q
    |||||||||| |||| ||||||    
T  3901032 gtataattgataaattgtaccc 3901011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 570 - 690
Target Start/End: Original strand, 50488740 - 50488859
Alignment:
Q  570 ataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatg 668  Q
    ||||||||||||||| ||||||||||||||  || ||||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||  ||||| |    
T  50488740 ataacaagaaacaaactttgttttaaaaaaaaac-tttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagg 50488837  T
Q  669 gtataattgacaaatcgtaccc 690  Q
    |||||||||| |||| ||||||    
T  50488838 gtataattgataaattgtaccc 50488859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 553 - 690
Target Start/End: Complemental strand, 39386821 - 39386684
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt-taaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagat 650  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||||  | ||||| |||| |||||| ||   || ||||||  ||||||||||||||    
T  39386821 tttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaaaataaactttatttttccaaatagattgtattaattag--ttattgaaaaagat 39386724  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||| ||||||||||| ||||||||||| ||||| |||||    
T  39386723 aagagtaattgacaaagggtataattgaaaaatcataccc 39386684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 553 - 654
Target Start/End: Complemental strand, 4671546 - 4671443
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaa-aaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||| |  ||||||||| ||||||||||  || ||||||||||||| ||||||||    
T  4671546 tttgtttaaatctgaagataataagaaacaaattttgttttaaaaaaacaaattttagttttccaaatatatagtattaattagttttattaaaaaagat 4671447  T
Q  651 aaga 654  Q
    ||||    
T  4671446 aaga 4671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 471 - 599
Target Start/End: Complemental strand, 19269946 - 19269818
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntttgtttaaatttgaag 569  Q
    ||||||||||||| |||||||| | ||||||||||||||||| |||||||| ||| |  |||||||||||||| |        ||||||| |||||||||    
T  19269946 cacttgaaatttt-aacaattactactcatcttatttatagaattttaactattcatgaaaccattattataggtaaaaaaaatttgtttcaatttgaag 19269848  T
Q  570 ataacaagaaacaaattttgttttaaaaaa 599  Q
    |||||||||| |||| ||||||||||||||    
T  19269847 ataacaagaagcaaactttgttttaaaaaa 19269818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 4395910 - 4395977
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaact 521  Q
    ||||||| ||| |||| |||||||||||||||||||||| |  |||||||||||||||| ||||||||    
T  4395910 tatgttcttttactttgcacttgaaatttttaacaattactattcatcttatttatagaattttaact 4395977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 594 - 683
Target Start/End: Original strand, 10101673 - 10101762
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    ||||||| | ||||||||||| ||||| ||| ||| | |||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||    
T  10101673 aaaaaacaaactttagttttccaaatagatagcatta-ttagttttattgaaaaagataagagtaattgagaaagggtataagtgacaaat 10101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 23699362 - 23699408
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  23699362 tttgtttaaatctgaagataacaagaaacacattttgttttaaaaaa 23699408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 47854740 - 47854650
Alignment:
Q  331 atattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    |||||||||||||||| |||| |||| ||||||||||||| | || ||||| ||||||  ||||  ||||| |||||| ||||||||||||    
T  47854740 atattcatcaactaatgagtgtttaatacaatagaccatattataaattataacattaatttattttaattgattattgtcaatccataat 47854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 553 - 594
Target Start/End: Original strand, 788219 - 788260
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttta 594  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  788219 tttgtttaaatttgaagataacaagaaataaattttgtttta 788260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 23698814 - 23698753
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||||| ||||| |||||| ||||||||||| | ||||||||||||||| |||||    
T  23698814 aattagttttatttaaaaatataagagtaattgacaaaggatataattgacaaatcataccc 23698753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 38278983 - 38278914
Alignment:
Q  295 atcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtg-cttaacacaata 363  Q
    ||||||||||||| ||| | |||||| |||||| |||||||||||||||||||||||  |||||||||||    
T  38278983 atcacggtccattcagagacaatagtccaatcacacatattcatcaactaattagtgtattaacacaata 38278914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 586 - 654
Target Start/End: Original strand, 40519193 - 40519262
Alignment:
Q  586 tttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    ||||||| ||||||| | ||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  40519193 tttgtttaaaaaaacaaactttagttttccaaatatatagcattaattagttttattaaaaaagataaga 40519262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 467 - 536
Target Start/End: Complemental strand, 41116727 - 41116658
Alignment:
Q  467 tttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccatt 536  Q
    ||||||| ||||||||||||||| |  | ||||||||||||||||| |||||||||||| || |||||||    
T  41116727 tttacacgtgaaatttttaacaaatgctactcatcttatttatagaattttaactcttctttaaaccatt 41116658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 619 - 667
Target Start/End: Original strand, 21535845 - 21535893
Alignment:
Q  619 atataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  21535845 atatagcattaattagttttattgaaaaatataagaataattgacaaat 21535893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 40519077 - 40519143
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||| ||| |||| ||||||||||||||||||||||    |||||||||||||||| ||||||||||||    
T  40519077 tgttcttttactttgcacttgaaatttttaacaatta---ttcatcttatttatagaattttaactcttc 40519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 604 - 653
Target Start/End: Original strand, 23699440 - 23699490
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataag 653  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  23699440 ctttagttttccaaatatatagcattaattagttttattgaaaaagataag 23699490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 611 - 688
Target Start/End: Complemental strand, 39157127 - 39157049
Alignment:
Q  611 tttcaaatatataacatgaattagttttatt-gaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    ||||||||||||||||| |||||||| ||||  ||||| |||||| ||||| ||||| ||||||| |||||||| ||||    
T  39157127 tttcaaatatataacattaattagttctattaaaaaaaaataagagtaattaacaaagggtataactgacaaattgtac 39157049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 642 - 687
Target Start/End: Original strand, 23699505 - 23699550
Alignment:
Q  642 gaaaaagataagaataattgacaaatggtataattgacaaatcgta 687  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||    
T  23699505 gaaaaagatacgagtaattgacaaagggtataattgacaaatcgta 23699550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 591 - 654
Target Start/End: Complemental strand, 30280126 - 30280062
Alignment:
Q  591 tttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    |||||||||| | ||||||||||| ||||||| ||||| ||||||||||||| || |||||||||    
T  30280126 tttaaaaaacaaactttagttttccaaatatacaacattaattagttttattaaagaagataaga 30280062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 47858426 - 47858375
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||||||||||||| ||||||| | |||||||||||||||  |||||||||    
T  47858426 agttttagtgtttaggcatggatcattagatacaaattataacatatcatca 47858375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 23697667 - 23697713
Alignment:
Q  553 tttgtttaaatttgaagataac-aagaaacaaatttt-gttttaaaa 597  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||    
T  23697667 tttgtttaaatttgaagataacaaagaaacaaattttggttttaaaa 23697713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 592 - 645
Target Start/End: Complemental strand, 39157182 - 39157128
Alignment:
Q  592 ttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaa 645  Q
    ||||||||| | |||||||||| |||||||||||||| |||||||| ||||||||    
T  39157182 ttaaaaaacaaactttagtttttcaaatatataacattaattagttctattgaaa 39157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 610 - 684
Target Start/End: Complemental strand, 52281787 - 52281713
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    |||| ||||| ||||||| ||||||||||||||||||||||  || || |||| ||| | ||||| |||||||||    
T  52281787 tttttaaatagataacattaattagttttattgaaaaagatccgagtagttgagaaaggatataagtgacaaatc 52281713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 629 - 690
Target Start/End: Original strand, 21967195 - 21967256
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| |||||||||| ||| ||||| | |||||||| || ||||||||| |||||    
T  21967195 aattagttttaatgaaaaagatgagagtaattaagaaatggtacaagtgacaaatcttaccc 21967256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 2e-80; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 267756 - 267956
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  267756 atgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtcaaacccatcacggtccatttagaaagaatagc 267855  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||||||||| |||||| |||||||||||    
T  267856 ccaatcagacatattcatcaactaattagtgcttaacgcaatagaccataatttatattatgacatcaacttataataattgattattgtcaatccataa 267955  T
Q  421 t 421  Q
    |    
T  267956 t 267956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 48853737 - 48853526
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48853737 ttaaccgtctgatgggatgacgtttaaatagttaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 48853638  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  48853637 gaaagaatagtccaatcatacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattg 48853538  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  48853537 tcaatccataat 48853526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 32517255 - 32517044
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  32517255 ttaaccgtctaatgggatgacgtttaaatagctaaacggctgagggcatggacctctcattgggcttagctaaatggtccaacccatcacggtcaattta 32517156  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    | ||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  32517155 gtaagaatagcccaatcatacatattcatcaactaataagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattg 32517056  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  32517055 tcaatccataat 32517044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 26450921 - 26451128
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  26450921 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggaagggacctctcattgggcttagctaaatggtccaacccatcacagtccattta 26451020  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    |||    |||  |||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||     
T  26451021 gaa----tagcccaatcacaaatattcatcatctaattagtgcttaacacaatagaccataatttatattatgacattaacttataataattgattattg 26451116  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  26451117 tcaatccataat 26451128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 278838 - 279023
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||||| ||||||| |||         ||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  278838 atgacgtttaaatagctaaacggctgagg-cagggacctct---------tagctaaatggtccaacccatcacggtccatttagaaagaatagcccaat 278927  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  278928 cagacatattcatcaactaattagtgcttaacgcaatagaccataatttatattatgacatcaatttataataattgattattgtcaatccataat 279023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 182 - 421
Target Start/End: Original strand, 40771614 - 40771851
Alignment:
Q  182 taggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagcta 281  Q
    ||||||||||| ||||| |||| ||   |||| ||||| |||| |||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  40771614 taggttttcaccatactgttcataatgcttaattgtctgatggaatgatgtttaaatagctaaacggctgagggcaaggacctctcattgagcttagcta 40771713  T
Q  282 aatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattat 381  Q
    ||||   |||  |||||||||||||||||||| ||||| ||||||| |||||||||  | |||||||||||| |||||||||||||||| |||||||||     
T  40771714 aatgagtcaattcatcacggtccatttagaaacaatagctcaatcacacatattcactagctaattagtgctcaacacaatagaccataatttatatta- 40771812  T
Q  382 gacattagcttataataatttattattatcaatccataat 421  Q
     | |||| |||||||||||| ||| |  ||||||||||||    
T  40771813 -agattaacttataataattgattgtcgtcaatccataat 40771851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 216 - 376
Target Start/End: Original strand, 29148723 - 29148882
Alignment:
Q  216 gtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaaga 315  Q
    |||| |||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||| ||||| |||||||||||||||    
T  29148723 gtctgatgggatgacgtttaaatagctaaacggctgagggcagg-acctctcattggacttagctaaatgttccaaccaatcaccgtccatttagaaaga 29148821  T
Q  316 atagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttat 376  Q
    ||| |  || |||||||||||||||||||||||||| |||| || |||||| ||| |||||    
T  29148822 ataatcgaaacatacatattcatcaactaattagtgtttaataccatagactataatttat 29148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 455 - 684
Target Start/End: Original strand, 35792972 - 35793203
Alignment:
Q  455 atgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntt 554  Q
    |||||| ||| |||||||||||||  |||||||||||  | ||||||||||||||||| |||||||| ||| | |||||||| ||   | |       ||    
T  35792972 atgttcttttactttacacttgaatattttaacaatttctactcatcttatttatagaattttaacttttcttagaaccattgttt--gttacaaaattt 35793069  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttttaa---aaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagat 650  Q
    |||||||||||||||||||||||||||||| ||||||||||   ||||  | | ||||||||| ||||| | ||||| ||||||||||||||||||||||    
T  35793070 tgtttaaatttgaagataacaagaaacaaactttgttttaagaaaaaaaaaacattagttttccaaatagacaacattaattagttttattgaaaaagat 35793169  T
Q  651 aagaataattgacaaatggtataattgacaaatc 684  Q
    |||| ||||||||||| |||||||||||||||||    
T  35793170 aagagtaattgacaaagggtataattgacaaatc 35793203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 216 - 377
Target Start/End: Complemental strand, 5173001 - 5172840
Alignment:
Q  216 gtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaaga 315  Q
    |||| |||| ||||||||||||||||||||||| |||||||| | || |||||||| |||||| ||||| || |||||||||| |||| ||||||||| |    
T  5173001 gtctaatgggatgacgtttaaatagctaaacggttgagggcaagaacctctcattgtgcttaggtaaatagttcaacccatcatggtcaatttagaaaca 5172902  T
Q  316 atagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttata 377  Q
    ||| | |||||| | |||||||||||||||||||||||||| |||||||| |||| ||||||    
T  5172901 ataatccaatcacatatattcatcaactaattagtgcttaatacaatagatcataatttata 5172840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 454 - 683
Target Start/End: Complemental strand, 16197011 - 16196781
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagtttt--aactcttcgttgaaccattattatagatnnnnnn 551  Q
    ||||||| ||| |||| |||||||| ||||||| |||| || ||||||||||||||||| ||||  |||||||| | |||||||| ||   | |          
T  16197011 tatgttcttttactttgcacttgaagtttttaaaaattgatactcatcttatttatagaattttttaactcttcttggaaccattgttt--gttacaaaa 16196914  T
Q  552 ntttgtttaaatttgaagataacaagaaacaaattttgtttta-aaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaaga 649  Q
     |||||||||||||||||| ||||||||||||| ||||||| | |||||| | |||||||||| ||| || ||||||| |||||||||||||||||||||    
T  16196913 ttttgtttaaatttgaagaaaacaagaaacaaactttgtttaataaaaacaaactttagttttccaattagataacatcaattagttttattgaaaaaga 16196814  T
Q  650 taagaataattgacaaatggtataattgacaaat 683  Q
    ||||| ||| ||||||| ||||||||||||||||    
T  16196813 taagagtaa-tgacaaagggtataattgacaaat 16196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 4962890 - 4963035
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-------aaccacctttagtttt-caaatatataacatgaattagttttattgaa 644  Q
    |||||||||||||||||||||||| ||||||||||||||||||||       ||| | |||||||||| |||||||||| ||  ||||||||||||||||    
T  4962890 tttgtttaaatttgaagataacaataaacaaattttgttttaaaacaaaacaaacaaactttagtttttcaaatatatagcactaattagttttattgaa 4962989  T
Q  645 aaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||| |||||||||||||||||| ||||||||||| ||||| |||||    
T  4962990 aaatataagaataattgacaaaaggtataattgataaatcataccc 4963035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 10534969 - 10535100
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagata 651  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||  | ||||| |||| |||||| || |||| |||||||||||||||||||||||    
T  10534969 tttggttaaatttgaagataacaagaaacaaactatgttttaaaaaaaaaactttaatttttcaaatagattacattaattagttttattgaaaaagata 10535068  T
Q  652 agaataattgacaaatggtataattgacaaat 683  Q
    |||  |||||||||| ||||||||||||||||    
T  10535069 agaggaattgacaaaaggtataattgacaaat 10535100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 466 - 687
Target Start/End: Complemental strand, 4567526 - 4567307
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaattt 565  Q
    |||| |||||||||||||||||||||  | ||||||||||||||||| |||||||||||| | |||||||| ||   |         |||||||||||||    
T  4567526 cttttcacttgaaatttttaacaattgctactcatcttatttatagaattttaactcttcttggaaccattgttt--gtaacaaaattttgtttaaattt 4567429  T
Q  566 gaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaa-tatataacatgaattagttttattgaaaaagataagaataattgaca 664  Q
    |||||||| |||||||||| ||||||| || |||  || |||||||||| || || ||| ||| |||||||||||||||||||||||| | || ||||||    
T  4567428 gaagataagaagaaacaaactttgtttaaagaaaaaac-tttagttttccaactagatagcattaattagttttattgaaaaagataaaagtagttgaca 4567330  T
Q  665 aatggtataattgacaaatcgta 687  Q
    || |||||||| |||||||||||    
T  4567329 aagggtataatcgacaaatcgta 4567307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 40771297 - 40771166
Alignment:
Q  288 ccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacatt 387  Q
    |||||| |||||| |||||||||||| |||||  |||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||  ||| |||    
T  40771297 ccaacctatcacgttccatttagaaacaatagcccaatcacacatattcatcaactaattagtgtttaacacaatagaccataatttatat--tgagatt 40771200  T
Q  388 agcttataataatttattattatcaatccataat 421  Q
    | |||||||||||| |||||  ||||||||||||    
T  40771199 aacttataataattgattatcgtcaatccataat 40771166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 8614790 - 8614927
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttt-aaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagat 650  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||| |||||||||| ||||||  ||||||||||||| ||||| ||    
T  8614790 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaaaaacatttagtttttcaaatagataacaataattagttttatt-aaaaaaat 8614888  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||| |||||||| || ||||||||||| |||||||||||    
T  8614889 aagagtaattgac-aagggtataattgaaaaatcgtaccc 8614927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 561 - 690
Target Start/End: Complemental strand, 28226667 - 28226536
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaa-aaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataa 658  Q
    ||||| |||||||||||||||||| ||||||  ||| |||  | |||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  28226667 aattttaagataacaagaaacaaactttgttaaaaataaaaaaactttagtttttcaaatatataacattaattagttttattgaaaaagataagagcaa 28226568  T
Q  659 ttgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||| ||||||||||||||| |||||||    
T  28226567 ttgacaaaaggtataattgacaaagcgtaccc 28226536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 556 - 690
Target Start/End: Complemental strand, 37124299 - 37124162
Alignment:
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaaaa--aaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataa 652  Q
    |||||||| |||||||||||||||| || |||||||| ||||  || || ||||||||||| ||||| | | ||| ||||||||||||||||||||||||    
T  37124299 gtttaaatgtgaagataacaagaaataatttttgtttgaaaataaaacaactttagttttccaaatagagagcattaattagttttattgaaaaagataa 37124200  T
Q  653 gaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    || ||||| ||||| |||||||||||||||| ||||||    
T  37124199 gagtaatttacaaagggtataattgacaaattgtaccc 37124162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 553 - 684
Target Start/End: Complemental strand, 25290753 - 25290614
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-------aaccacctttagtttt-caaatatataacatgaattagttttattgaa 644  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||       ||| | |||||||||| ||||||||  |||| ||||||||||||||||    
T  25290753 tttgtttaaatttgatgataacaggaaacaaattttgttttaaaataaaacaaacaaactttagtttttcaaatatacgacattaattagttttattgaa 25290654  T
Q  645 aaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||| |||||||||||||||||| | ||||||||| |||||    
T  25290653 aaatataagaataattgacaaaagatataattgataaatc 25290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 575 - 688
Target Start/End: Original strand, 2273495 - 2273609
Alignment:
Q  575 aagaaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtata 673  Q
    |||||||||| ||||||| | ||||| | ||||||||||| ||||||||| ||| ||| |||||||||||||||||||||| |||||||||||  |||||    
T  2273495 aagaaacaaactttgtttcataaaacaaactttagttttccaaatatatagcattaataagttttattgaaaaagataagagtaattgacaaagcgtata 2273594  T
Q  674 attgacaaatcgtac 688  Q
    |||||||||| ||||    
T  2273595 attgacaaattgtac 2273609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 561 - 690
Target Start/End: Original strand, 36412806 - 36412934
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataat 659  Q
    ||||| |||||||||||||||||| ||||||||||||||  | |||||| ||||||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  36412806 aatttaaagataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaat 36412903  T
Q  660 tgacaaatggtataattgacaaatcgtaccc 690  Q
      ||||| ||||||||||| |||| ||||||    
T  36412904 aaacaaagggtataattgataaattgtaccc 36412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 39430587 - 39430700
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| | ||||| | |||||||||| |||||||||| ||  ||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  39430587 aaacaaactttgtttaataaaacaaactttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaagagtataatt 39430686  T
Q  677 gacaaatcgtaccc 690  Q
    | |||||| |||||    
T  39430687 gtcaaatcttaccc 39430700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 604 - 690
Target Start/End: Complemental strand, 15643410 - 15643323
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||| |||||| ||||||| ||| ||||||||||| |||||||||||    
T  15643410 ctttagttttccaaatatatagcattaattagttttattgaaaaaaataagagtaattgataaagggtataattgagaaatcgtaccc 15643323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 466 - 597
Target Start/End: Complemental strand, 15643576 - 15643444
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatt 564  Q
    |||| |||||||||||||||| || || |  |||||||||||||||| |||||||||||| |  ||||||||| |||| |       ||| |||||||||    
T  15643576 ctttgcacttgaaatttttaaaaagtactattcatcttatttatagaattttaactcttcatgtaaccattatgatagctaacaaaattttgtttaaatt 15643477  T
Q  565 tgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||| ||||||||||||||||||||    
T  15643476 tgaagataacaataaacaaattttgttttaaaa 15643444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 586 - 690
Target Start/End: Complemental strand, 2798698 - 2798594
Alignment:
Q  586 tttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||| |||| || | |||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  2798698 tttgtttaaaaatacaaactttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaattgacaga-ggtataatcgacaaatc 2798600  T
Q  685 gtaccc 690  Q
     |||||    
T  2798599 ataccc 2798594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 24394211 - 24394324
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| |||| || | ||||||||||| ||||||||| ||| | ||||||||||| ||||| |||||| || |||||||| |||||||||    
T  24394211 aaacaaactttgtttaaaaatacaaactttagttttccaaatatatatcattagttagttttattcaaaaatataagagtagttgacaaagggtataatt 24394310  T
Q  677 gacaaatcgtaccc 690  Q
    || |||||||||||    
T  24394311 gataaatcgtaccc 24394324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 41747201 - 41747304
Alignment:
Q  586 tttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcg 685  Q
    ||||||| ||||||| | ||||||| || ||||||||||||  ||||||||| ||| |||| ||||||||||| |||||||||||||| ||||||| |||    
T  41747201 tttgtttaaaaaaacaaactttagtatttaaatatataacaataattagtttcatt-aaaaggataagaataactgacaaatggtatatttgacaagtcg 41747299  T
Q  686 taccc 690  Q
    |||||    
T  41747300 taccc 41747304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 578 - 682
Target Start/End: Complemental strand, 43368883 - 43368781
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| |||||||||||||| |   |||||||||| ||||||||||| | ||||||||||||| |||||||||| | ||||||||||| ||||| |||    
T  43368883 aaacaaactttgttttaaaaaaac---tttagttttccaaatatataactttaattagttttatttaaaaagataaaagtaattgacaaagggtatgatt 43368787  T
Q  677 gacaaa 682  Q
    ||||||    
T  43368786 gacaaa 43368781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 578 - 683
Target Start/End: Original strand, 7809181 - 7809287
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttca-aatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||||||||||  | |||||||||||  |||| |||  || ||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  7809181 aaacaaaatttgttttaaaaaataaactttagttttcctaatacatagtattaattagttttatttaaaaagataaaagtaattgagaaatggtataatt 7809280  T
Q  677 gacaaat 683  Q
    |||||||    
T  7809281 gacaaat 7809287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 604 - 690
Target Start/End: Original strand, 14735067 - 14735152
Alignment:
Q  604 ctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||||  ||||||| | |||||||||||||||||||||||| ||||| | |||| |||||| |||||||||||||||    
T  14735067 ctttagttttcaaattgataacatta-ttagttttattgaaaaagataagagtaattaagaaatagtataaatgacaaatcgtaccc 14735152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 594 - 690
Target Start/End: Complemental strand, 39617625 - 39617532
Alignment:
Q  594 aaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||| | ||||||||||| ||   ||||||| ||||| |||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  39617625 aaaaaacaaactttagttttccaa---ataacattaattaattttattgaaaaagataaaagtaattgacaaaaggtataactgacaaatcgtaccc 39617532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 14771289 - 14771414
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagat 571  Q
    ||||||||||||||||  || | ||||| ||||||||||| |||||||||||| | |||| ||||| |||  |       ||| ||||||||||||||||    
T  14771289 cttgaaatttttaacatgtattactcatgttatttatagaattttaactcttcatggaactattatcatatttaacaaaattttgtttaaatttgaagat 14771388  T
Q  572 aacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||| ||||    
T  14771389 aacaagaaacaaattttgtttaaaaa 14771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 15221741 - 15221866
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagat 571  Q
    ||||||||||||||||  || | ||||| ||||||||||| |||||||||||| | |||| ||||| |||  |       ||| ||||||||||||||||    
T  15221741 cttgaaatttttaacatgtattactcatgttatttatagaattttaactcttcatggaactattatcatatttaacaaaattttgtttaaatttgaagat 15221840  T
Q  572 aacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||| ||||    
T  15221841 aacaagaaacaaattttgtttaaaaa 15221866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 3835651 - 3835763
Alignment:
Q  578 aaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataat 675  Q
    ||||||| ||||||| |||||| ||  ||||||||||| ||||| |||| || ||||||||  |||||||||||||||| | ||||||| | ||||||||    
T  3835651 aaacaaactttgtttaaaaaaaacaaactttagttttccaaatagataatattaattagtt--attgaaaaagataagagtgattgacagagggtataat 3835748  T
Q  676 tgacaaatcgtaccc 690  Q
    |||||||||||||||    
T  3835749 tgacaaatcgtaccc 3835763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 631 - 690
Target Start/End: Original strand, 14771449 - 14771508
Alignment:
Q  631 ttagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  14771449 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccc 14771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 631 - 690
Target Start/End: Original strand, 15221901 - 15221960
Alignment:
Q  631 ttagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  15221901 ttagttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccc 15221960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 456 - 536
Target Start/End: Complemental strand, 17269739 - 17269658
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaatt-ctcatcttatttatagagttttaactcttcgttgaaccatt 536  Q
    ||||| ||| |||| |||||||||||||||||||||||||  |||||||||||||||| |||||||| ||| | ||||||||    
T  17269739 tgttcttttactttgcacttgaaatttttaacaattaattattcatcttatttatagaattttaactattcatagaaccatt 17269658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 678
Target Start/End: Original strand, 39599661 - 39599777
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattg-aaaaagataagaataa 658  Q
    ||||| ||||||| || ||||||| ||||||| |||||| |   ||||||||| |||||||||| ||| |||||||||||| | |||||||||||| |||    
T  39599661 aattttaagataaaaacaaacaaactttgtttaaaaaaaac---tttagtttttcaaatatatagcattaattagttttatcgaaaaaagataagagtaa 39599757  T
Q  659 ttgacaaatggtataattga 678  Q
    |||| ||| |||||||||||    
T  39599758 ttgataaagggtataattga 39599777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 46671971 - 46672015
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  46671971 tttgtttaaatttgaagataacaagaaataaattttgttttaaaa 46672015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 582 - 647
Target Start/End: Complemental strand, 4678500 - 4678434
Alignment:
Q  582 aaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    ||||||||||| |||||||   ||||||||||| ||||||||||||| |||||||||||||||||||    
T  4678500 aaattttgtttaaaaaaacatactttagttttccaaatatataacattaattagttttattgaaaaa 4678434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 617 - 667
Target Start/End: Original strand, 10026242 - 10026292
Alignment:
Q  617 atatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  10026242 atatataacattaattagttttattgaaaaagataagagtaattaacaaat 10026292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 553 - 598
Target Start/End: Original strand, 3835604 - 3835649
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaa 598  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||    
T  3835604 tttgtttaaatttgaagataacaagaaacaaactttgtttaaaaaa 3835649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 12394278 - 12394233
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaa 598  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  12394278 tttgtttaaatttgatgataacaagaaacaaactttgttttaaaaa 12394233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 44550080 - 44550019
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| |||||||||||||| ||||||| |||||||| || ||||||||| |||||    
T  44550080 aattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttaccc 44550019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 24394160 - 24394204
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  24394160 tttgtttaaatatgaagataacaagaaataaattttgttttaaaa 24394204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 26450759 - 26450815
Alignment:
Q  27 tttagccatggataactagatacaaattatagaatatcatcaattataatgaatgaa 83  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||| |||| |||||||    
T  26450759 tttagccatggatcactatatacaaattatagcatatcatcaataataaagaatgaa 26450815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 48853915 - 48853867
Alignment:
Q  20 tttagtgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||    
T  48853915 tttagtgtttagccatagatcactagatacaaattatagcatatcatca 48853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 27723523 - 27723468
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||||||||||||||||||||  | ||||||||||||||||| ||||| ||||||    
T  27723523 acacttgaaatttttaacaattgttactcatcttatttatagaattttagctcttc 27723468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 39427610 - 39427544
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||| ||| |||| |||||||||||||||||||||| |   ||||||||||||||| ||||||||||||    
T  39427610 tgttcatttactttgcacttgaaatttttaacaattatt---catcttatttatagaattttaactcttc 39427544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 610 - 688
Target Start/End: Complemental strand, 27723358 - 27723280
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    |||||||| | ||| ||| ||||||||||| |||||||||||| | ||||| |||||  |||||| |||||||||||||    
T  27723358 ttttcaaacagatagcattaattagttttactgaaaaagataaaagtaattaacaaagagtataagtgacaaatcgtac 27723280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 473 - 543
Target Start/End: Complemental strand, 39432827 - 39432757
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatag 543  Q
    ||||||||||||||||| || | ||||| ||||||||||| |||||||||||| | |||| ||||| ||||    
T  39432827 cttgaaatttttaacaagtactactcatgttatttatagaattttaactcttcatggaactattatcatag 39432757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 610 - 667
Target Start/End: Complemental strand, 39432660 - 39432603
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||||||||||||| ||  ||| ||||||||||||||| |||| ||||||||||||||    
T  39432660 ttttcaaatatatagcactaataagttttattgaaaaatataaaaataattgacaaat 39432603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 629 - 684
Target Start/End: Original strand, 39247328 - 39247382
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||||||||||| |||||| |||| |||||| |||| ||||||||||||    
T  39247328 aattagttttattgaaaaa-ataagagtaatggacaaagggtacaattgacaaatc 39247382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 656 - 690
Target Start/End: Original strand, 2271947 - 2271981
Alignment:
Q  656 taattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| |||||||||||||||||||||||    
T  2271947 taattgacaaagggtataattgacaaatcgtaccc 2271981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 456 - 522
Target Start/End: Complemental strand, 37124397 - 37124331
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactc 522  Q
    ||||| ||| |||| ||||||||||||||||||| |  | |||||||| |||||||| |||||||||    
T  37124397 tgttcttttactttgcacttgaaatttttaacaaatgctactcatcttttttatagaattttaactc 37124331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 599
Target Start/End: Complemental strand, 43368924 - 43368886
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  43368924 aattttaagataacaagaaacaaactttgttttaaaaaa 43368886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 267565 - 267614
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcat 66  Q
    ||||| || |||||||||||||| |||||||||| ||||||| |||||||    
T  267565 agtttaagggtttagccatggatcactagatacagattatagcatatcat 267614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 591 - 654
Target Start/End: Complemental strand, 39427490 - 39427425
Alignment:
Q  591 tttaaaaaaccacctttagttttc-aaatatataacatgaatt-agttttattgaaaaagataaga 654  Q
    |||||||||| | ||||||||||| ||||||||| ||| |||| ||||||||| ||||||||||||    
T  39427490 tttaaaaaacaaactttagttttccaaatatatagcattaatttagttttattaaaaaagataaga 39427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 2e-80; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 2e-80
Query Start/End: Original strand, 220 - 421
Target Start/End: Complemental strand, 40113538 - 40113335
Alignment:
Q  220 catggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatag 319  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40113538 catgggatgacgtttaaatagctaaacagctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccatttaaaaagaatag 40113439  T
Q  320 ttcaatcatacatattcatcaactaat--tagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatcca 417  Q
     ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||    
T  40113438 ctcaatcacacatattcatcaactaattatagtgcttaacacaatagaccataatttatattatgacattaacttataataattaattattgtcaatcca 40113339  T
Q  418 taat 421  Q
    ||||    
T  40113338 taat 40113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 216 - 421
Target Start/End: Complemental strand, 3950132 - 3949927
Alignment:
Q  216 gtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaaga 315  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3950132 gtctcatgggatgacgtttaaatagttaaacggctgagggcaaggacctctcattgggcttagctaaatggtctaacccatcacggtccatttagaaaga 3950033  T
Q  316 atagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatc 415  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||| |||||| ||||||    
T  3950032 atagttcaatcacacatatttatcaattaattagtgcttgacacaatagactataatttatattatgacattaacttataataattgattattgtcaatc 3949933  T
Q  416 cataat 421  Q
    ||||||    
T  3949932 cataat 3949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 161 - 421
Target Start/End: Original strand, 18341524 - 18341784
Alignment:
Q  161 taccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacggctgagggcaggg 260  Q
    ||||||||||| || |||| ||||||||||| | || | ||| |||   ||||| |||| |||| ||||||||||||||||||||| | ||| |||||||    
T  18341524 taccctcattcggtttagcgttaggttttcagagtagtgttcggaatgcttaaccgtctgatgggatgacgtttaaatagctaaacagttgaaggcaggg 18341623  T
Q  261 acatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacaca 360  Q
    || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  18341624 acctctcattgagcttagctaaatggtccaacccatcacggtccatatagaaagaatagctcaatcacacatattcatcatctaattagtgcttaacaca 18341723  T
Q  361 atagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||| |||| ||||||||||||||||| |||||||||||| |||||| | ||||||||||    
T  18341724 atagatcataatttatattatgacattaacttataataattaattattgtgaatccataat 18341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 23888414 - 23888609
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  23888414 atgacgtttaaatagctaaacggctgagggcagggacctctcattgggattagctaaatggtccaacccatcacggtccatttagaaagaatagtccgat 23888513  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||||||||    
T  23888514 catacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattgtcaatccataat 23888609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 226 - 421
Target Start/End: Original strand, 23892490 - 23892685
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  23892490 atgacgtttaaatagctaaacggctgagggcagggacctctcattgggattagctaaatggtccaacccatcacggtccatttagaaagaatagtccgat 23892589  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||||||||    
T  23892590 catacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattgtcaatccataat 23892685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 24138522 - 24138311
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  24138522 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattggacttaactaaatggtccaacccatcacggtccattta 24138423  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
     ||||||||  |||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  24138422 aaaagaataactcaatcatacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattg 24138323  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  24138322 tcaatccataat 24138311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 175 - 421
Target Start/End: Complemental strand, 39190279 - 39190035
Alignment:
Q  175 ctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggc 274  Q
    |||||||||||||||||||||  | || |||| ||||||  ||   |||| |||||||||| |||||||||||||||||||||||||| ||||||||| |    
T  39190279 ctagctttaggttttcacaatgttgttgagaataattaatcgtg--atgggatgacgtttacatagctaaacggctgagggcagggacctctcattggac 39190182  T
Q  275 ttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagttt 374  Q
    |||||||||||||||||||||||||||||||||||| || |||||  ||||||  ||||||||||||||||||| || |||||||||||||||||| |||    
T  39190181 ttagctaaatggtccaacccatcacggtccatttagtaacaatagcccaatcactcatattcatcaactaattaatgtttaacacaatagaccataattt 39190082  T
Q  375 atattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||| | |||| || ||||||||| |||||| ||||||||||||    
T  39190081 atattataagattaactcataataattgattattgtcaatccataat 39190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 221 - 421
Target Start/End: Complemental strand, 670139 - 669939
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||||||||||||||| |||||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  670139 atgggatgacgtttaaatagctgaacggctgagggcatgaacctctcattgggcttagctaaatggtctaacccatcacggtccatttagaaagaataga 670040  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||  || | ||||  ||||||||||| |||||| |||||||||||    
T  670039 tcaatcacacatattcatcaagtaattagtgcttaacacaatagaccacaatttataaaataatattaatttataataattgattattgtcaatccataa 669940  T
Q  421 t 421  Q
    |    
T  669939 t 669939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 41826695 - 41826523
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||||||      |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41826695 ttaaccgtctgatgggatgacgtttaaatagctaaacgg------gcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 41826602  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacatta 388  Q
     ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||    
T  41826601 aaaagaatagctcaatcaaacatattcatcaactaattagtgcttaacacaatagaccataatttatactataacatta 41826523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 221 - 364
Target Start/End: Original strand, 15144277 - 15144420
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||     
T  15144277 atgggatgacatttaaatagctaaacggctgagggcagggatctctcattgggcttagttaaatggtccaactcatcacggtccatttagaaagaatagc 15144376  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatag 364  Q
     |||||| ||||||||||||||||||||||||||||||||||||    
T  15144377 acaatcacacatattcatcaactaattagtgcttaacacaatag 15144420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 226 - 377
Target Start/End: Complemental strand, 662902 - 662751
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||| |||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  662902 atgacgtttaaatagctgaacgactgagggcagtgacctctcattggacttagctaaatggtccaacccatcacggtccatttagaaagaatagctcaat 662803  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttata 377  Q
    || ||||||||||||| ||||||||| ||||||||||| |||| | ||||||    
T  662802 cacacatattcatcaagtaattagtgtttaacacaataaaccacaatttata 662751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 226 - 380
Target Start/End: Complemental strand, 25336300 - 25336147
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||  ||||| |||||  || ||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  25336300 atgacgtttaaatagctaaatagctgatggcaga-acctctcattagacttaactaaatggttcaacccatcacggtccatttagaaagaatagttcaat 25336202  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatatta 380  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25336201 cacacatattcatcaactaattagtgcttaacacaacagaccatagtttatatta 25336147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 456 - 689
Target Start/End: Complemental strand, 44898340 - 44898101
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| ||||| || ||||||||||||| | | | ||||||||||||| |||||||||||| | ||||||||||||||| |       |||    
T  44898340 tgttcttttactttgcacttaaattttttaacaattattgcccctcttatttatagaattttaactcttcatagaaccattattataggtaataaaattt 44898241  T
Q  556 -gtttaaatttgaagataacaagaaacaaattttgttttaaaaaac----cacctttagtttt-caaatatataacatgaattagttttattgaaaaaga 649  Q
     ||||||||||||||||||||||||||  | ||||||| |||||||    || |||||||||| |||||||||||||| |||||||||||||||||||||    
T  44898240 tgtttaaatttgaagataacaagaaacgcactttgtttaaaaaaacaaaccaactttagtttttcaaatatataacattaattagttttattgaaaaaga 44898141  T
Q  650 taagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||| ||||||||||| ||||||||||| ||||||||||    
T  44898140 taagagtaattgacaaagggtataattgaaaaatcgtacc 44898101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 229 - 419
Target Start/End: Original strand, 17527331 - 17527524
Alignment:
Q  229 acgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcat 328  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||||     
T  17527331 acgtttaaatagctaaactgttgagagcagggacctctcattgggcttagctaaatagtccaacccatcacggtccatttagaaagaatggcccaatcac 17527430  T
Q  329 acatattcatcaactaat---tagtgcttaacacaataga-ccatagtttatattatgacattagcttataataatttattattatcaatccata 419  Q
    ||||||||||||||||||   ||||||||||||||||| | |||||   |||| ||| | |||| |||||||||||| |||||| ||||||||||    
T  17527431 acatattcatcaactaattagtagtgcttaacacaataaacccata-aatataatataatattaacttataataattgattattgtcaatccata 17527524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 210 - 333
Target Start/End: Complemental strand, 14661400 - 14661277
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||    
T  14661400 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagagcagggacctcccattgagcttagctaaatggtccaacccatcacggtccattta 14661301  T
Q  310 gaaagaatagttcaatcatacata 333  Q
     |||||||||| ||||||||||||    
T  14661300 aaaagaatagtccaatcatacata 14661277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 454 - 690
Target Start/End: Complemental strand, 15507685 - 15507440
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccatta--ttatagatnnnnnn 551  Q
    ||||||| ||| |||| |||||||||||||||||||||| | ||||||||||||||||  |||||||| ||| | |||||||||  |||||| |          
T  15507685 tatgttcgtttactttgcacttgaaatttttaacaattattactcatcttatttatagtattttaactattcatggaaccattaatttataggtagcaaa 15507586  T
Q  552 nttt-gtttaaatttgaagataacaagaaacaaattttgttttaaaa------aaccacctttagtttt-caaatatataacatgaattagttttattga 643  Q
     ||| |||| ||||| |||||||||| ||||||| ||||||||||||      ||| | |||||||||| ||| |||||| ||| ||||||||| |||||    
T  15507585 attttgtttgaattttaagataacaaaaaacaaactttgttttaaaagaaacaaacaaactttagtttttcaattatatagcattaattagttt-attga 15507487  T
Q  644 aaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  15507486 aaaagataagagtaattgacaaagggtataattgacaaatcataccc 15507440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 454 - 690
Target Start/End: Complemental strand, 21252806 - 21252570
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||| ||||  ||||||||||||||||||||  | ||||||||||||||||| |||||||||||| | |||||||| ||    |        |    
T  21252806 tatgttcttttactttgtacttgaaatttttaacaattgttactcatcttatttatagaattttaactcttcttggaaccattgtttgcaa---caaatt 21252710  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaa--aaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagat 650  Q
    |||||||||||| ||||||||||||||| |||||||||| ||  ||||  | |||||||||| |||||| ||| ||| ||||| ||||||||||||||||    
T  21252709 ttgtttaaatttaaagataacaagaaactaattttgtttaaagaaaaataaactttagtttttcaaatagatagcattaattaattttattgaaaaagat 21252610  T
Q  651 aagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||  |||||||||||  ||||||||||||||||||||||    
T  21252609 aagtgtaattgacaaagagtataattgacaaatcgtaccc 21252570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 454 - 676
Target Start/End: Complemental strand, 41541278 - 41541048
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnn 552  Q
    ||||||| |||| ||  |||||||||||||||||||||||| | |||||||||||||||  ||||||| ||| | |||||||||||||||||            
T  41541278 tatgttcttttctttagcacttgaaatttttaacaattaatacgcatcttatttatagaactttaactattcatcgaaccattattatagataacaaaat 41541179  T
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt------taaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaa 645  Q
    ||||||||||||| |||||||||||||||||| ||| |||       ||||||  | |||||| |||||||||||||| ||| |||||||||||||||||    
T  41541178 tttgtttaaattttaagataacaagaaacaaactttatttaaaaaacaaaaaataaactttagtttttcaaatatatagcattaattagttttattgaaa 41541079  T
Q  646 aagataagaataattgacaaatggtataatt 676  Q
    ||||||||| ||| ||||||| | |||||||    
T  41541078 aagataagagtaaatgacaaaagatataatt 41541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 210 - 350
Target Start/End: Original strand, 17530028 - 17530171
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcac---ggtccat 306  Q
    ||||| |||| |||| |||||||| ||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||   |||||||    
T  17530028 ttaaccgtctgatgggatgacgttgaaatagctaaacggctgagcgcagtgacctctcattgggtttagctaaatggtccaacccatcacggtggtccat 17530127  T
Q  307 ttagaaagaatagttcaatcatacatattcatcaactaattagt 350  Q
    ||| |||||||    |||||| ||||||||||||||||||||||    
T  17530128 ttaaaaagaatgacacaatcacacatattcatcaactaattagt 17530171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 466 - 683
Target Start/End: Complemental strand, 33659920 - 33659699
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatt 564  Q
    |||| ||||| |||||||||||||||| | || |||||||||||||| ||||| || ||  | |||||||| |||||| |       ||| |||||||||    
T  33659920 ctttgcactttaaatttttaacaattactacttatcttatttatagaattttagctatttatggaaccattgttataggtaacaaaattttgtttaaatt 33659821  T
Q  565 tgaagataacaagaaacaa--attttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattg 661  Q
      |||||||||||||||||  | || |||| ||||||| | ||| |||||| ||||||||||| || |||||||||||||||||||||||||| ||||||    
T  33659820 gtaagataacaagaaacaagcaattagtttaaaaaaacaaacttcagtttttcaaatatataatattaattagttttattgaaaaagataagagtaattg 33659721  T
Q  662 acaaatggtataattgacaaat 683  Q
    ||||||| ||||||||||||||    
T  33659720 acaaatgatataattgacaaat 33659699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 553 - 681
Target Start/End: Original strand, 20171400 - 20171530
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-aaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagat 650  Q
    |||||||| |||| || |||||||||| |||| ||||||| |||| ||| | ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20171400 tttgtttatattttaacataacaagaaccaaactttgtttaaaaataacaaactttagttttccaaatatataacattaattagttttattgaaaaagat 20171499  T
Q  651 aagaataattgacaaatggtataattgacaa 681  Q
    |||| ||||||||||| ||||||||||||||    
T  20171500 aagagtaattgacaaagggtataattgacaa 20171530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 454 - 686
Target Start/End: Original strand, 45273277 - 45273511
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnt 553  Q
    ||||||| ||| |||| ||||||||||||||| |||||  | |||||||||||| |||  |||||||||||| | |||||||| ||   |         |    
T  45273277 tatgttcttttactttgcacttgaaatttttagcaatttttgctcatcttatttgtaggattttaactcttcttggaaccattgttt--gtaacaaagtt 45273374  T
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccac---ctttagttttc-aaatatataacatgaattagttttattgaaaaaga 649  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||  |    ||||| ||||| ||||| ||| ||| |||||||||||||||||||||    
T  45273375 ttgtttaaattttaagataacaagaaacaaactttgtttaaaaaaaatataaactttatttttctaaatagatatcattaattagttttattgaaaaaga 45273474  T
Q  650 taagaataattgacaaatggtataattgacaaatcgt 686  Q
    ||||| ||||||||||| |||||||||||| ||||||    
T  45273475 taagagtaattgacaaagggtataattgacgaatcgt 45273511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 561 - 687
Target Start/End: Original strand, 1770148 - 1770276
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataa 658  Q
    ||||| |||||||||||||| | | |||||||||||||| ||  |||||||||| |||||||||||||| |||||||||||||||||||  ||||| | |    
T  1770148 aattttaagataacaagaaatagactttgttttaaaaaaacaaactttagtttttcaaatatataacattaattagttttattgaaaaaattaagagtga 1770247  T
Q  659 ttgacaaatggtataattgacaaatcgta 687  Q
    |||||||||| ||||||||| ||||||||    
T  1770248 ttgacaaatgatataattgataaatcgta 1770276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 157953 - 158073
Alignment:
Q  480 tttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntttgtttaaatttgaagataacaaga 578  Q
    ||||||||||||| | ||| ||||||||||| | |||||||||||| |||||||||||||||||||        ||||||||||||||||| ||||||||    
T  157953 tttttaacaattactactcgtcttatttataaaattttaactcttcattgaaccattattatagataacaaaattttgtttaaatttgaaggtaacaaga 158052  T
Q  579 aacaaattttgttttaaaaaa 599  Q
    |||||| ||||||||||||||    
T  158053 aacaaactttgttttaaaaaa 158073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 578 - 687
Target Start/End: Original strand, 158078 - 158188
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| |  |||||||||| |||||||||| || |||||||||||||||||||||||||| |||||  |||| |||||||||    
T  158078 aaacaaactttgtttaaaaaaacaaattttagttttccaaatatataaaattaattagttttattgaaaaagataagagtaatttgcaaagggtataatt 158177  T
Q  677 gacaaatcgta 687  Q
    |||||||||||    
T  158178 gacaaatcgta 158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 604 - 684
Target Start/End: Complemental strand, 4316774 - 4316693
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  4316774 ctttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaaagatataattgacaaatc 4316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 553 - 684
Target Start/End: Original strand, 16806513 - 16806645
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattag-ttttattgaaaaagat 650  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||  | |||||| |||||||||| | ||||| |||||| |||| |||||||| ||    
T  16806513 tttgtttaaatttgaggataacaagaatcaaattttg-tttaaaaaaataactttagtttttcaaatagacaacattaattagttttttttgaaaaatat 16806611  T
Q  651 aagaataattgacaaatggtataattgacaaatc 684  Q
    |||  ||||||||||| |||||||||||||||||    
T  16806612 aagtgtaattgacaaagggtataattgacaaatc 16806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 553 - 684
Target Start/End: Original strand, 16845794 - 16845926
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattag-ttttattgaaaaagat 650  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||  | |||||| |||||||||| | ||||| |||||| |||| |||||||| ||    
T  16845794 tttgtttaaatttgaggataacaagaatcaaattttg-tttaaaaaaataactttagtttttcaaatagacaacattaattagttttttttgaaaaatat 16845892  T
Q  651 aagaataattgacaaatggtataattgacaaatc 684  Q
    |||  ||||||||||| |||||||||||||||||    
T  16845893 aagtgtaattgacaaagggtataattgacaaatc 16845926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 249 - 420
Target Start/End: Complemental strand, 33426021 - 33425851
Alignment:
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    ||||||| |||||| |||||||| |||||||||||| ||| |||| |||| | ||||||||||||  |||   |||| | |||||||||||| ||||||     
T  33426021 ctgagggtagggacctctcattgagcttagctaaatagtcaaacctatcatgatccatttagaaactataacacaattacacatattcatcatctaattc 33425922  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
    ||| ||||||||||| | |||| |||||||||  | |||| | |||||||||| |||||| |||||||||||    
T  33425921 gtgtttaacacaatacatcataatttatattaaaagattaac-tataataattgattattgtcaatccataa 33425851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 150299 - 150377
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||| |||||||||||| ||||||||||    
T  150299 ttttcaaatatataacattaattagttttattgaaaa--ataagagtaattgacaaagggtataattgacgaatcgtaccc 150377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 604 - 684
Target Start/End: Original strand, 36244049 - 36244130
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||    
T  36244049 ctttagttttccaaatatataacattaattagttttattaaaaaatataagagtaattgacaaagggtataattgacaaatc 36244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 42756860 - 42756780
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  42756860 tttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaaagatataattgacaaatcataccc 42756780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 581 - 687
Target Start/End: Original strand, 4700951 - 4701058
Alignment:
Q  581 caaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgac 679  Q
    |||||||||||| ||||||| |  |||||||||| |||||||||  || ||||| |||||||||||| ||||||| |||||||||||| ||||||||||     
T  4700951 caaattttgtttaaaaaaacaatatttagttttccaaatatatagtattaattaattttattgaaaacgataagagtaattgacaaatagtataattgat 4701050  T
Q  680 aaatcgta 687  Q
    ||||||||    
T  4701051 aaatcgta 4701058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 578 - 684
Target Start/End: Complemental strand, 11084004 - 11083898
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | |||||||||| |||||||||||||| ||||||||||||| |||||||| |||  |||||||||| |||||||||    
T  11084004 aaacaaactttgttt-aaaaaacaaactttagtttttcaaatatataacattaattagttttattaaaaaagatcagagaaattgacaaaaggtataatt 11083906  T
Q  677 gacaaatc 684  Q
     |||||||    
T  11083905 aacaaatc 11083898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 456 - 592
Target Start/End: Complemental strand, 11084148 - 11084013
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| || ||||||||||||||||||| | |||||||||||||| || |||||||| ||| | ||||||||||||||| |       |||    
T  11084148 tgttcttttactttgcatttgaaatttttaacaattactactcatcttatttat-gaattttaactattcatggaaccattattataggtgacaaaattt 11084050  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttt 592  Q
    |||||||||| |||||| ||||||||||| |||||||    
T  11084049 gtttaaattttaagatagcaagaaacaaactttgttt 11084013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 614 - 689
Target Start/End: Original strand, 32113378 - 32113453
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||| ||| | ||||||||||||||| ||||    
T  32113378 caaatatataacattaattagttttattgaaaaatataagaataattgataaaggatataattgacaaatcatacc 32113453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 553 - 689
Target Start/End: Original strand, 38589259 - 38589400
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacc----tttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    ||||||||||| ||||||||| ||||| |||| |||| || ||||||  | |    |||||||||| ||||| ||| ||| ||||  |||||||||||||    
T  38589259 tttgtttaaatgtgaagataaaaagaagcaaactttggttaaaaaaaaaaacaagttttagttttctaaatagatagcattaattgattttattgaaaaa 38589358  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||| | ||||||||||||||||||||||| ||||||||||    
T  38589359 gataaaagtaattgacaaatggtataattgataaatcgtacc 38589400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 614 - 684
Target Start/End: Complemental strand, 33659623 - 33659553
Alignment:
Q  614 caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||| | |||| ||||||||||||||||    
T  33659623 caaatatataacattaattagttttattgaaaaatataagagtaattaataaattgtataattgacaaatc 33659553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 4959369 - 4959481
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| || ||||||| || ||||||||| ||| ||||| ||||||| ||||  |||||||| ||||||||| |||||||||    
T  4959369 aaacaaactttgtttaaaaaaacaac-tttagttatccaaatatatagcattaattaattttattaaaaactataagaatgattgacaaacggtataatt 4959467  T
Q  677 gacaaatcgtaccc 690  Q
    |||||||| |||||    
T  4959468 gacaaatcataccc 4959481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 578 - 654
Target Start/End: Original strand, 7486303 - 7486380
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataaga 654  Q
    ||||||||||||||| |||||||   ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  7486303 aaacaaattttgtttaaaaaaacagactttagttttccaaatatataacattaattagttttattgaaaaatataaga 7486380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 578 - 690
Target Start/End: Original strand, 25965860 - 25965973
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| | ||||  | |||||||||| |||||||||||    ||| ||||||||||||||| |||||| ||||||||||| |||||| ||    
T  25965860 aaacaaactttgtttaagaaaataaactttagtttttcaaatatataatgataatgagttttattgaaaaatataagagtaattgacaaagggtatagtt 25965959  T
Q  677 gacaaatcgtaccc 690  Q
    ||||||||||||||    
T  25965960 gacaaatcgtaccc 25965973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 470 - 600
Target Start/End: Original strand, 29408647 - 29408775
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaag 569  Q
    ||||||||||| ||||||||||  | ||||| ||||||||||| |||||||||||  | |||||||| || ||||        |||||||||||||||||    
T  29408647 acacttgaaatctttaacaattgttactcattttatttatagaattttaactcttattggaaccattgtt-taga-acaaaattttgtttaaatttgaag 29408744  T
Q  570 ataacaagaaacaaattttgttttaaaaaac 600  Q
    |||||||||||||| |||||||| |||||||    
T  29408745 ataacaagaaacaagttttgtttaaaaaaac 29408775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 42872273 - 42872345
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||||||    
T  42872273 ttttcaaatatataacattaattagttt-attaaaaaaaataagagtaattgacaaaaggtataattgacaaat 42872345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 25965813 - 25965857
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25965813 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 25965857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 610 - 690
Target Start/End: Complemental strand, 27746537 - 27746457
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| | ||||  ||||| ||||||||||||||||| |||||    
T  27746537 ttttcaaatatatagcattaattagttttattgaaaaatataaaagtaataaacaaaaggtataattgacaaatcataccc 27746457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 591 - 690
Target Start/End: Original strand, 20891305 - 20891402
Alignment:
Q  591 tttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| | ||||||||||| || ||||||||| |||||||||||||| |||| | |||| ||||||||||||| ||||||||| |||| ||||||    
T  20891305 tttaaaaaacaaactttagttttccaa-atataacattaattagttttattg-aaaatacaagagtaattgacaaatgatataattgataaattgtaccc 20891402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 553 - 596
Target Start/End: Complemental strand, 27746621 - 27746578
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaa 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27746621 tttgtttaaatttgaagataacaagaaacaaattttgttttaaa 27746578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 34424712 - 34424756
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  34424712 tttgtttaaatttgaagataacaaaaaacaaattttgttttaaaa 34424756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 456 - 584
Target Start/End: Original strand, 42872123 - 42872252
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntt 554  Q
    ||||| ||| ||||||||||||||||||||||||||| | ||||||| ||||||| | |||||| | ||| |  ||||||| |||||| |        ||    
T  42872123 tgttcttttactttacacttgaaatttttaacaattattactcatctgatttataaaattttaattattcataaaaccattgttataggtaacaaagttt 42872222  T
Q  555 tgtttaaatttgaagataacaagaaacaaa 584  Q
    ||||||||||| ||||||||||||||||||    
T  42872223 tgtttaaattttaagataacaagaaacaaa 42872252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 36243896 - 36243951
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaact 521  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  36243896 cttttcacttgaaatttttaacaattattactcatcttatttatagaattttaact 36243951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 39190409 - 39190350
Alignment:
Q  20 tttagtgtttagccatggataactagatacaaattatagaatatcatcaattataatgaa 79  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||| |||    
T  39190409 tttagtgtttagtcatggatcactagatacaaattatagcatatcatcaataataaagaa 39190350  T

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Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 1397606 - 1397560
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1397606 tttgtttaaatttaaagataataagaaacaaattttgttttaaaaaa 1397560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 4840581 - 4840654
Alignment:
Q  253 gggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatca 327  Q
    |||||||||| |||| ||| |||||||||||||||||||| |||||| || ||||||||||||||| | ||||||    
T  4840581 gggcagggacctctctttgagcttagctaaatggtccaactcatcac-gttcatttagaaagaataatccaatca 4840654  T

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Target: chr2; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 597
Target Start/End: Original strand, 7486171 - 7486297
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaattt 565  Q
    |||| |||||| |||||||||||| || |  |||||||||||||||| |||||||||||| |  |||||||||   | |        |||||||||||||    
T  7486171 ctttgcacttgcaatttttaacaagtattattcatcttatttatagaattttaactcttcatgaaaccattatctaaca-----aattttgtttaaattt 7486265  T
Q  566 gaagataacaagaaacaaattttgttttaaaa 597  Q
    |||||||||||||||||||| ||| |||||||    
T  7486266 gaagataacaagaaacaaatattgctttaaaa 7486297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 629 - 690
Target Start/End: Original strand, 11073996 - 11074055
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||||  ||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  11073996 aattagtttta--gaaaaagataagagtaattgacaaagggtataattgacaaattgtaccc 11074055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 610 - 684
Target Start/End: Original strand, 29882186 - 29882260
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||||||||||  |||||||||||| |||||||||||| || |||| ||| ||||||| | |||||||    
T  29882186 ttttcaaatatataacattgattagttttattcaaaaagataagagtagttgagaaagggtataagtaacaaatc 29882260  T

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Target: chr2; HSP #57
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 586 - 683
Target Start/End: Original strand, 34424771 - 34424869
Alignment:
Q  586 tttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    ||||||| || |||| | |||| |||||| |||||||||| || |||||||||| |||||||| |||| |||||| |||||| ||| ||||||||||||    
T  34424771 tttgtttaaacaaacaaacttttgttttccaaatatataatattaattagttttgttgaaaaatataataataatcgacaaagggtttaattgacaaat 34424869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 33024486 - 33024397
Alignment:
Q  454 tatgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatag 543  Q
    ||||||| ||| |||| ||||||||||||||||| |||||| ||||| || |||||| | |||||||| ||| |  ||||||||||||||    
T  33024486 tatgttcttttactttgcacttgaaatttttaacgattaatactcattttgtttataaaattttaactattcatgaaaccattattatag 33024397  T

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Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 560 - 597
Target Start/End: Complemental strand, 42756937 - 42756900
Alignment:
Q  560 aaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42756937 aaatttgaagataacaagaaacaaattttgttttaaaa 42756900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 3309858 - 3309937
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| ||| ||  ||||||||||||||||||| |||| | ||||||||||||  ||||||||||||||| |||||    
T  3309858 ttttcaaatagatagcaataattagttttattgaaaaa-ataaaagtaattgacaaattctataattgacaaatcttaccc 3309937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 12411804 - 12411760
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  12411804 tttgtttaaatttgaagataagatgaaacaaattttgttttaaaa 12411760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 553 - 597
Target Start/End: Complemental strand, 12423864 - 12423820
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  12423864 tttgtttaaatttgaagataagatgaaacaaattttgttttaaaa 12423820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 604 - 667
Target Start/End: Original strand, 29408804 - 29408868
Alignment:
Q  604 ctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||    
T  29408804 ctttagttttgcaaatagataacattaattacttttattgaaaaagataaaagtaattgacaaat 29408868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 4840508 - 4840554
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaat 195  Q
    ||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  4840508 gagagggatgactaccctcattccgtctagctttagtttttcacaat 4840554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 599
Target Start/End: Complemental strand, 43043032 - 43042994
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  43043032 aattttaagataacaagaaacaaattttgttttaaaaaa 43042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 4316841 - 4316796
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaa 598  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||    
T  4316841 tttgtttaaatttaaagataacaaggaacaaactttgttttaaaaa 4316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 14661578 - 14661530
Alignment:
Q  19 ttttagtgtttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  14661578 ttttagtgtttagccatggatcac-agatacaaattatagcatatcatca 14661530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 4959322 - 4959362
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  4959322 tttaaatttgaagataacaagaaacaaaaattgttttaaaa 4959362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 1397687 - 1397632
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||||||||||| ||||||||  | ||||||||||||||||| ||||||| ||||    
T  1397687 acacttgaaatttgtaacaattgttcctcatcttatttatagaattttaacacttc 1397632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 604 - 647
Target Start/End: Complemental strand, 2218279 - 2218236
Alignment:
Q  604 ctttagttttcaaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||    
T  2218279 ctttagttttcaaatagatatcattaattagttttattgaaaaa 2218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 473 - 544
Target Start/End: Complemental strand, 12412826 - 12412755
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattataga 544  Q
    ||||||||||| ||||| ||||  |||| ||||||||||| |||||||||||| | |||| ||||| |||||    
T  12412826 cttgaaattttcaacaagtaataatcattttatttatagaattttaactcttcatggaacaattatcataga 12412755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 473 - 544
Target Start/End: Complemental strand, 12424886 - 12424815
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattataga 544  Q
    ||||||||||| ||||| ||||  |||| ||||||||||| |||||||||||| | |||| ||||| |||||    
T  12424886 cttgaaattttcaacaagtaataatcattttatttatagaattttaactcttcatggaacaattatcataga 12424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 14661277 - 14661214
Alignment:
Q  358 acaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||||||||    
T  14661277 acaatagaccatattataaattataacattaatttataataattgattattgtcaatccataat 14661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 13140909 - 13140981
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| |||||||  |||||||||||||||||| || ||| |||||||  || ||||||||||| ||||    
T  13140909 ttttcaaatagataacatttattagttttattgaaaaatat-agagtaattgaagaaaggtataattgataaat 13140981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 24138693 - 24138652
Alignment:
Q  27 tttagccatggataactagatacaaattatagaatatcatca 68  Q
    ||||| ||||||| |||||||||||||||||| |||||||||    
T  24138693 tttagtcatggatcactagatacaaattatagcatatcatca 24138652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 25336461 - 25336420
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatag 58  Q
    |||||||||||| |||||||||| ||||||||||| ||||||    
T  25336461 agttttagtgttaagccatggatcactagatacaagttatag 25336420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 6e-80; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 32038108 - 32038319
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32038108 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 32038207  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  32038208 gaaagaatagtccaatcatacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattg 32038307  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  32038308 tcaatccataat 32038319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 226 - 421
Target Start/End: Complemental strand, 44626244 - 44626049
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44626244 atgacgtttaaatagctaaacggctgaaggcagagacctctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagctcaat 44626145  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
     | ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||| |||||| ||||||||||||    
T  44626144 tagacatattcatcaactaattagtgcttaacacaataaaccataatttatattatgacatcaacttataataattgattattgtcaatccataat 44626049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 226 - 421
Target Start/End: Complemental strand, 1262441 - 1262246
Alignment:
Q  226 atgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaat 325  Q
    ||||||||||||| |||||||||||||||||| |||  ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||    
T  1262441 atgacgtttaaatggctaaacggctgagggcatggatctctcattaggcttagctaaatggtcaaactcatcacggtccatttagaaagaatagcccaat 1262342  T
Q  326 catacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    || ||||||||||||||||||||||||||||||||||||| |||| |||||||||  |||||| |||||||||||| |||||| ||||||||||||    
T  1262341 cacacatattcatcaactaattagtgcttaacacaatagatcataatttatattagaacattaacttataataattgattattctcaatccataat 1262246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 221 - 421
Target Start/End: Original strand, 26005551 - 26005751
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagt 320  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||     
T  26005551 atgggatgacgtttaaatagctaaacggctgagggtagggacctctcattgggcttagctaaatggtccaacccatcacagtccatttagtaagaatagc 26005650  T
Q  321 tcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataa 420  Q
     |||||||||||||||||||| |||| ||||||||| | |||| |||||| | || ||||| | ||||  ||||||||||| |||||| |||||||||||    
T  26005651 ccaatcatacatattcatcaattaatgagtgcttaatataataaaccatattataaattataatattaatttataataattgattattgtcaatccataa 26005750  T
Q  421 t 421  Q
    |    
T  26005751 t 26005751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 210 - 421
Target Start/End: Original strand, 45266134 - 45266332
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| |||||||||||||||||||||| |||||||||| ||  ||||||||||||||             |||||||||| ||||||||    
T  45266134 ttaaccgtctgatggaatgacgtttaaatagctaaacgactgagggcagtgatctctcattgggctta-------------acccatcacgatccattta 45266220  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  ||||||  |||||| |||||||||||||||||||| |||||| || ||| ||||||||||||||||| |||||||||||||||||||     
T  45266221 gaaagaatagcccaatcacccatatttatcaactaattagtgcttaatacaatatactataatttatattatgacattaacttataataatttattattg 45266320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 27 - 363
Target Start/End: Complemental strand, 39517663 - 39517326
Alignment:
Q  27 tttagccatggataactagatacaaattatagaatatcatcaattataa----tgaatgaagaaactgtgtactttgaatgaattagggttgaggaagga 122  Q
    |||||||||| || ||||||||||| |||||| ||||||||||| | ||    |||||||||||| ||||||| || ||   |||||| ||||  |||||    
T  39517663 tttagccatgtatcactagatacaagttatagcatatcatcaataacaaagaatgaatgaagaaattgtgtacctttaa---attagg-ttgataaagga 39517568  T
Q  123 taaccaccgaccacgccgataactacgagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcat 222  Q
    ||||| || || | || || ||||| ||||| |||||||| |||| |||  ||||| ||||||||||||||||  | |||||||   ||||| |||| ||    
T  39517567 taaccgccaacaaagctgacaactatgagagagataactatcctcgttccatctagttttaggttttcacaatgttgttcagaatgcttaaccgtctgat 39517468  T
Q  223 ggta-tgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagtt 321  Q
    || | ||| ||||||||||||||||| ||||  |||| ||| ||||||||  || |||||||| ||| ||||||| || |||||||||  || |||||||    
T  39517467 gggaatgatgtttaaatagctaaacgactgaaagcagagacctctcattgaactcagctaaattgtcaaacccattacagtccatttaataacaatagtt 39517368  T
Q  322 caatcatacatattcatcaactaattagtgcttaacacaata 363  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  39517367 caatcacacatattcatcgactaattagtgcttaacacaata 39517326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 211 - 340
Target Start/End: Original strand, 17497514 - 17497643
Alignment:
Q  211 taactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttag 310  Q
    |||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||    
T  17497514 taaccgtctgatgggatgacgtttaaatagctaaacgactgagggcagggacctctcattgggtttggctaaatggtccaacccatcacggtccatttag 17497613  T
Q  311 aaagaatagttcaatcatacatattcatca 340  Q
    ||||||||   |||||| ||||||||||||    
T  17497614 aaagaataacccaatcacacatattcatca 17497643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 276 - 401
Target Start/End: Complemental strand, 18324865 - 18324740
Alignment:
Q  276 tagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagttta 375  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| ||||    
T  18324865 tagctaaatgattcaacccatcacggtccatttagaaagaatagttcaatcgcacttattcatcaactaattagtgcttaacacaatagaccataattta 18324766  T
Q  376 tattatgacattagcttataataatt 401  Q
    || ||| | |||| ||||||||||||    
T  18324765 taatataatattaacttataataatt 18324740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 221 - 415
Target Start/End: Complemental strand, 38144006 - 38143818
Alignment:
Q  221 atggtatgacgtttaaatagctaaacggctgaggg--cagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaata 318  Q
    |||| |||| |||||||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||||||||| ||| |||||| ||||||||    
T  38144006 atgggatgaggtttaaatagctaaacggctgagggggcagggacctctcattgggcttggataaatggtccaacccatcatggttcatttaaaaagaata 38143907  T
Q  319 gttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatc 415  Q
       |||||||        |||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||    
T  38143906 tcccaatcat--------atcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattgtcaatc 38143818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 34548111 - 34548210
Alignment:
Q  225 tatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaa 324  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  34548111 tatgacgtttaa-tagctaaacggctgagggcaaggacctctcattgagcttagctaaatggtctaatccatcacggtccatttagaaagaatagctcaa 34548209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 557 - 684
Target Start/End: Complemental strand, 32233754 - 32233624
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataa-catgaattagttttattgaaaaagataag 653  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||  |  ||||||| ||| ||||| |||| ||| |||||||||||||||||||||||||    
T  32233754 tttaaatttgaagataacaataaacaaactttgtttaaaaaaaaaaaactttagtgttccaaatagataagcattaattagttttattgaaaaagataag 32233655  T
Q  654 aataattgacaaatggtataattgacaaatc 684  Q
    | ||||||||||| |||||||||||||||||    
T  32233654 agtaattgacaaagggtataattgacaaatc 32233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 553 - 690
Target Start/End: Original strand, 1530552 - 1530689
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataa 652  Q
    ||||||| |||||||||| ||||||||||||  |||| || ||||||  || ||  ||||||||||| ||| ||| ||| ||||||||||||||| ||||    
T  1530552 tttgtttcaatttgaagaaaacaagaaacaagctttgattaaaaaaaaaactttaggttttcaaatagatagcattaatcagttttattgaaaaaaataa 1530651  T
Q  653 gaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    || |||||||||||  ||||||||||||||||||||||    
T  1530652 gagtaattgacaaaatgtataattgacaaatcgtaccc 1530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 554 - 689
Target Start/End: Complemental strand, 27231905 - 27231764
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-----aaccacctttagttttc-aaatatataacatgaattagttttattgaaaaa 647  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||     ||| | ||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  27231905 ttgtttaaatttaaagataacaagaaacaaactttgtttaaaaagaacgaacaaactttagttttccaaatagatagcattaattagttttattgaaaaa 27231806  T
Q  648 gataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
     |||||||||||| |||||  |||||||||| ||||||||||    
T  27231805 aataagaataattaacaaagagtataattgataaatcgtacc 27231764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 456 - 659
Target Start/End: Original strand, 29315731 - 29315934
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| ||||||||||||||||||||||||||| |   | ||||||||||||| |||||||||||| |  ||  |||||||||  |       |||    
T  29315731 tgttcttttactttacacttgaaatttttaacaattatt---cgtcttatttatagaattttaactcttcataaaatgattattatatgtaacaaaattt 29315827  T
Q  556 -gtttaaatttgaagataacaagaaacaaattttgtttt-aaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataa 652  Q
     |||||||| || |||||||||||||||||||||||||| ||||||  | |||||||||| |||||||||| ||| | ||||||||||| ||||||||||    
T  29315828 tgtttaaatctgtagataacaagaaacaaattttgttttaaaaaaaaaaactttagttttccaaatatatagcattacttagttttattaaaaaagataa 29315927  T
Q  653 gaataat 659  Q
    || ||||    
T  29315928 gagtaat 29315934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 554 - 690
Target Start/End: Original strand, 39628238 - 39628385
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgtttt---------aaaaaaccacctttagttttc-aaatatataacatgaattagttttattga 643  Q
    ||||||||||||||||||||||||||||||| ||| ||||         ||||||| | ||||||||||| ||||| ||||||| |||||||||||||||    
T  39628238 ttgtttaaatttgaagataacaagaaacaaacttttttttcaaaaaaaaaaaaaacaaactttagttttccaaatagataacattaattagttttattga 39628337  T
Q  644 aaaagataagaataattga-caaatggtataattgacaaatcgtaccc 690  Q
    |||| |||||| |||||||  ||| |||||||||||||||||||||||    
T  39628338 aaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccc 39628385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 554 - 690
Target Start/End: Original strand, 39637788 - 39637935
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgtttt---------aaaaaaccacctttagttttc-aaatatataacatgaattagttttattga 643  Q
    ||||||||||||||||||||||||||||||| ||| ||||         ||||||| | ||||||||||| ||||| ||||||| |||||||||||||||    
T  39637788 ttgtttaaatttgaagataacaagaaacaaacttttttttcaaaaaaaaaaaaaacaaactttagttttccaaatagataacattaattagttttattga 39637887  T
Q  644 aaaagataagaataattga-caaatggtataattgacaaatcgtaccc 690  Q
    |||| |||||| |||||||  ||| |||||||||||||||||||||||    
T  39637888 aaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccc 39637935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 554 - 678
Target Start/End: Complemental strand, 9455367 - 9455236
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaa-------aaccacctttagtttt-caaatatataacatgaattagttttattgaaa 645  Q
    |||||||||||||||||||||||||||  ||||| |||||||||       ||| | ||||| |||| |||||||||| ||| |||||||||||||||||    
T  9455367 ttgtttaaatttgaagataacaagaaaataattt-gttttaaaacgaaacaaacaaactttattttttcaaatatatagcattaattagttttattgaaa 9455269  T
Q  646 aagataagaataattgacaaatggtataattga 678  Q
    || ||||||||||||||||||||||||||||||    
T  9455268 aatataagaataattgacaaatggtataattga 9455236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 456 - 690
Target Start/End: Complemental strand, 25496874 - 25496639
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| ||||| ||||||||||||| |  | ||||||||||||||||| ||| |||||||| |  ||||||| || || |        |||    
T  25496874 tgttcttttactttgcacttaaaatttttaacaactgctactcatcttatttatagaatttaaactcttcttgaaaccattgtt-tata-acaaaatttt 25496777  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaa--aaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataa 652  Q
    |||||||||| ||||||| |||||||||| |||| || ||  ||||| | |||||| |||||||||| ||| ||| ||||||||||||||||||||||||    
T  25496776 gtttaaatttaaagataataagaaacaaactttgcttaaaataaaacaaactttagtttttcaaatagatagcattaattagttttattgaaaaagataa 25496677  T
Q  653 gaataattgacaaatggtataattgacaaatcgtaccc 690  Q
     | ||||| ||||| ||||||||||| ||||| |||||    
T  25496676 aagtaattaacaaagggtataattgataaatcataccc 25496639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 471 - 667
Target Start/End: Complemental strand, 34039100 - 34038904
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttg-tttaaatttgaag 569  Q
    ||||||||||||||||||| ||   ||| ||||||||||||| |||||||| ||| | ||| ||||||||||| |       |||  ||||||||| |||    
T  34039100 cacttgaaatttttaacaacta---ctcgtcttatttatagaattttaactattcatggaatcattattataggtaacaaaattttatttaaattttaag 34039004  T
Q  570 ataacaagaaacaaattttgttttaaaaaacca--cctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||||||||||||| ||||||| |||||| ||  | || | |||| ||||||||||||| || || ||||||||||||||||||  |||||||||||||    
T  34039003 ataacaagaaacaaactttgtttaaaaaaaacaaactttaattttttaaatatataacattaactatttttattgaaaaagataaatataattgacaaat 34038904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 456 - 690
Target Start/End: Complemental strand, 25400694 - 25400460
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt 555  Q
    ||||| ||| |||| ||||| ||||||||||||| |  | ||||||||||||||||| ||| |||||||| |  ||||||| ||    ||       |||    
T  25400694 tgttcttttactttgcacttaaaatttttaacaactgctactcatcttatttatagaatttaaactcttcttgaaaccattgttt---ataacaaaattt 25400598  T
Q  556 gtttaaatttgaagataacaagaaacaaattttgttttaaa--aaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataa 652  Q
    |||||||||| ||||||| |||||||||| |||| || |||  |||| | ||||||||||| ||||| ||| ||| |||||||||||||||||| |||||    
T  25400597 gtttaaatttaaagataataagaaacaaactttgcttaaaataaaacaaactttagttttccaaatagatagcattaattagttttattgaaaaggataa 25400498  T
Q  653 gaataattgacaaatggtataattgacaaatcgtaccc 690  Q
     | ||||| ||||| ||||||||||| ||||| |||||    
T  25400497 aagtaattaacaaagggtataattgataaatcataccc 25400460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 610 - 684
Target Start/End: Complemental strand, 14896699 - 14896625
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  14896699 tttttaaatatataacattaattagttttattgaaaaagataagagtaattgacaaatgatatatttgacaaatc 14896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 586 - 690
Target Start/End: Complemental strand, 34146279 - 34146173
Alignment:
Q  586 tttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||||||| ||  ||||||||||| ||||| | | ||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  34146279 tttgttttaaaaaaacaaactttagttttccaaatagacatcattaattagttttattgaaaaagataagagtaattgacaaagagtataattgacaaat 34146180  T
Q  684 cgtaccc 690  Q
    |||||||    
T  34146179 cgtaccc 34146173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 3443579 - 3443704
Alignment:
Q  473 cttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttg-tttaaatttgaagat 571  Q
    |||| |||||||||||| || | ||||| ||||||||||| |||||||| ||| | |||| ||||| ||||||       |||| |||||||||||||||    
T  3443579 cttggaatttttaacaagtactactcatattatttatagaattttaacttttcatggaactattatcatagataacaaaatttggtttaaatttgaagat 3443678  T
Q  572 aacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||||||||    
T  3443679 aacaagaaacaaattttgttttaaaa 3443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 7578222 - 7578302
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||    
T  7578222 tttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaagggtataattgacagatcataccc 7578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 610 - 690
Target Start/End: Original strand, 7695309 - 7695389
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    |||||||||| ||||||| || ||||||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||    
T  7695309 ttttcaaatagataacattaactagttttattgaaaaagataagagtaattaaaaaatgatataattgacaaatcgtaccc 7695389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 604 - 683
Target Start/End: Original strand, 16599385 - 16599465
Alignment:
Q  604 ctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  16599385 ctttagttttacaaatatatatcattaattagttttattgaaaaagataagagtaattgataaatggtataactgacaaat 16599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 570 - 683
Target Start/End: Complemental strand, 40557319 - 40557208
Alignment:
Q  570 ataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatg 668  Q
    ||||||||||||||| ||||||||||||||  | |||||||||| ||||| |||||||| ||||||||| |||||||||||||||| ||||  ||||| |    
T  40557319 ataacaagaaacaaactttgttttaaaaaa--aactttagtttttcaaatttataacattaattagttt-attgaaaaagataagagtaatcaacaaagg 40557223  T
Q  669 gtataattgacaaat 683  Q
    |||||||||| ||||    
T  40557222 gtataattgataaat 40557208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 561 - 683
Target Start/End: Original strand, 41411430 - 41411551
Alignment:
Q  561 aatttgaagataacaagaaacaaattttgttttaaaaaaccacctttag-ttttcaaatatataacatgaattagttttattgaaaaagataagaataat 659  Q
    ||||| |||||||||||||||||| ||||||||||||||  | |||||| ||||||||| |||||| | |||||||||| ||||||||||||||| ||||    
T  41411430 aatttaaagataacaagaaacaaactttgttttaaaaaa-aaactttagtttttcaaatttataactttaattagtttt-ttgaaaaagataagagtaat 41411527  T
Q  660 tgacaaatggtataattgacaaat 683  Q
      ||||| ||||||||||| ||||    
T  41411528 caacaaagggtataattgataaat 41411551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 45272805 - 45272876
Alignment:
Q  305 atttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttat 376  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  45272805 atttagaaagaatagtccaattacacatattcatcaactaattagtgtttaacacgatagaccatagtttat 45272876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 553 - 667
Target Start/End: Complemental strand, 16393834 - 16393717
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa--ccacctttagtttt-caaatatataacatgaattagttttattgaaaaaga 649  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||||||  | | |||||||||| |||||| ||| ||| ||||||||||||||||||||     
T  16393834 tttgtttaaatttgaagataacaaaaaataaactttgtttaaaaaaaaccaaactttagttttccaaatagatagcattaattagttttattgaaaaagc 16393735  T
Q  650 taagaataattgacaaat 667  Q
    ||| | ||||||||||||    
T  16393734 taaaagtaattgacaaat 16393717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 18325047 - 18324933
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    |||||| |||||||| ||||||| || |||| ||||||||||| | |||| |||||||   ||||| |||| |||| ||||||||||||||| ||||||     
T  18325047 gagaggaataactactctcattccgtttagcgttaggttttcagagtactgttcagaatgtttaaccgtctgatgggatgacgtttaaatagttaaacga 18324948  T
Q  249 ctgagggcagggaca 263  Q
    |||||||||||||||    
T  18324947 ctgagggcagggaca 18324933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 578 - 682
Target Start/End: Original strand, 3443711 - 3443816
Alignment:
Q  578 aaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataatt 676  Q
    ||||||| ||||||| ||||||| | |||||||||| |||||||||| ||| ||||||||| ||||||||| ||||||| ||||| |||  |||||||||    
T  3443711 aaacaaactttgtttaaaaaaacaaactttagtttttcaaatatatagcattaattagtttgattgaaaaaaataagaacaattgtcaacgggtataatt 3443810  T
Q  677 gacaaa 682  Q
    ||||||    
T  3443811 gacaaa 3443816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 564 - 683
Target Start/End: Complemental strand, 38401684 - 38401563
Alignment:
Q  564 ttgaagataacaagaaacaaattttgttttaaaaaaccac-ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattg 661  Q
    ||||||||||||||||||||  ||||||| ||||||  |  ||||| ||||| ||||| ||||||| ||||| ||||||| |||||||||||| ||||||    
T  38401684 ttgaagataacaagaaacaatctttgtttaaaaaaaataaactttaattttcgaaataaataacattaattaattttattaaaaaagataagagtaattg 38401585  T
Q  662 acaaatggtataattgacaaat 683  Q
    ||||||  ||||||||||||||    
T  38401584 acaaataatataattgacaaat 38401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 456 - 592
Target Start/End: Original strand, 1358750 - 1358887
Alignment:
Q  456 tgttcctttcctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat-nnnnnnntt 554  Q
    ||||| ||| |||| |||||||| |||||||||||||   ||||||||||| ||||| |||||||| ||| | ||||||||||||||| |        ||    
T  1358750 tgttcttttactttgcacttgaattttttaacaattaccactcatcttattcatagaattttaactattcatggaaccattattataggtaacaaaattt 1358849  T
Q  555 tgtttaaatttgaagataacaagaaacaaattttgttt 592  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  1358850 tgtttaaattttaagataacaagaaacaaactttgttt 1358887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 610 - 673
Target Start/End: Complemental strand, 5870825 - 5870762
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtata 673  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  5870825 ttttcaaatagataacattaattagttttattgaaaatgataagaataattgacaaatgatata 5870762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 554 - 684
Target Start/End: Original strand, 1256683 - 1256817
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaa----aaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaag 648  Q
    |||||||||||||||||| |||||||||||| ||||||| |||    |||  | ||||| ||||| ||||| || |||| ||||| |||||||  |||||    
T  1256683 ttgtttaaatttgaagattacaagaaacaaactttgtttaaaaaaagaaataaactttaattttctaaatagatgacattaattaattttatt-taaaag 1256781  T
Q  649 ataagaataattgacaaatggtataattgacaaatc 684  Q
    |||||| ||||||||||| || ||||||||||||||    
T  1256782 ataagagtaattgacaaagggcataattgacaaatc 1256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 586 - 667
Target Start/End: Original strand, 2742927 - 2743009
Alignment:
Q  586 tttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||||| ||||||| | ||||| |||| |||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||    
T  2742927 tttgtttaaaaaaacaaactttaatttttcaaatatatagcattaattagttttattgaaaaatataaaaataattgacaaat 2743009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 5870990 - 5870920
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccatt 536  Q
    |||| |||||||||||||||||||||  | ||||||||||||||||| |||||||||||| | ||||||||    
T  5870990 ctttgcacttgaaatttttaacaattgttactcatcttatttatagaattttaactcttcttggaaccatt 5870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 594 - 690
Target Start/End: Complemental strand, 4418656 - 4418560
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||| | ||||||||||| ||||||||| ||| ||||||||||||| |||||||| ||  |||||||||||  |||||||||||||||| |||||    
T  4418656 aaaaaactaactttagttttccaaatatatagcattaattagttttatt-aaaaagatgagggtaattgacaaagagtataattgacaaatcataccc 4418560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 624 - 683
Target Start/End: Original strand, 30887894 - 30887952
Alignment:
Q  624 acatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaat 683  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  30887894 acattaattagttttattaaaaaagataagagtaattgacaaa-ggtataattgacaaat 30887952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 578 - 667
Target Start/End: Complemental strand, 38457375 - 38457284
Alignment:
Q  578 aaacaaattttgtttt-aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
    ||||||| ||| |||| ||||||| | ||||||||||| ||||| ||| ||| |||||||||||||||||||||||| ||||||||| ||||    
T  38457375 aaacaaactttattttgaaaaaacaaactttagttttccaaatagatagcattaattagttttattgaaaaagataaaaataattgataaat 38457284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 32037927 - 32037973
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatat 63  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  32037927 agttttagtgtttagccatggatcactagatacaaattatagcatat 32037973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 610 - 687
Target Start/End: Original strand, 43026704 - 43026782
Alignment:
Q  610 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattga-caaatggtataattgacaaatcgta 687  Q
    ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||  |||  || ||||||||||||||||    
T  43026704 ttttcaaatatgtaacattaattaattttattgaaaaatataagaataattgataaaaacgtgtaattgacaaatcgta 43026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 467 - 524
Target Start/End: Original strand, 7695142 - 7695199
Alignment:
Q  467 tttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||| |||||||||||    
T  7695142 tttacacttgaaatttttaaaaattgttactcatcttatttatagaattttaactctt 7695199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 34146334 - 34146289
Alignment:
Q  554 ttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaa 599  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  34146334 ttgtttaaatttgaagataacaagaaacagactttgttttaaaaaa 34146289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 34548212 - 34548277
Alignment:
Q  356 acacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||||||||| ||||||||||  |||||  ||||||||||| |||||| ||||||||||||    
T  34548212 acacaatagaccataatttatattatatcattaatttataataattgattattgtcaatccataat 34548277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 557 - 596
Target Start/End: Complemental strand, 3741782 - 3741743
Alignment:
Q  557 tttaaatttgaagataacaagaaacaaattttgttttaaa 596  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  3741782 tttaaatatgaagataacaagaaacaaattttgttttaaa 3741743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 3741647 - 3741601
Alignment:
Q  642 gaaaaagataagaataattgacaaatggtataattgacaaatcgtac 688  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||    
T  3741647 gaaaaagatacgagtaactgacaaatggtataattgacaaatcgtac 3741601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 659
Target Start/End: Complemental strand, 3741730 - 3741656
Alignment:
Q  586 tttgttttaaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataat 659  Q
    ||||||| ||||||  | ||||||||||| ||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  3741730 tttgtttaaaaaaataagctttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaat 3741656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 471 - 525
Target Start/End: Complemental strand, 11087341 - 11087287
Alignment:
Q  471 cacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    |||||||||||||||||||||  | || |||||||||||||| ||||||||||||    
T  11087341 cacttgaaatttttaacaattgttacttatcttatttatagaattttaactcttc 11087287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 38144206 - 38144160
Alignment:
Q  19 ttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||    
T  38144206 ttttagtgtttagccatggatcattagatacaaattatagcatatca 38144160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 38151266 - 38151220
Alignment:
Q  19 ttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||    
T  38151266 ttttagtgtttagccatggatcattagatacaaattatagcatatca 38151220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 690
Target Start/End: Original strand, 1358944 - 1359005
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||||||| |||||||||| ||| ||||||| ||| || |||||||||||||| |||||    
T  1358944 aattagttttaatgaaaaagattagagtaattgataaagggcataattgacaaatcataccc 1359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 560 - 597
Target Start/End: Original strand, 7578144 - 7578181
Alignment:
Q  560 aaatttgaagataacaagaaacaaattttgttttaaaa 597  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  7578144 aaatttgaagataacaagaaacaaattttattttaaaa 7578181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 477 - 599
Target Start/End: Original strand, 30887739 - 30887859
Alignment:
Q  477 aaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnntttgtttaaatttgaagataacaa 576  Q
    ||||||| ||||||| ||  |||||||||||||||| |||||||||||| | |||||||| ||  | ||       ||||||||||||| ||||||||||    
T  30887739 aaattttgaacaattgatattcatcttatttatagaattttaactcttcttagaaccattgtttgaaat--aaaattttgtttaaatttaaagataacaa 30887836  T
Q  577 gaaacaaattttgttttaaaaaa 599  Q
     ||||||| ||| |||| |||||    
T  30887837 aaaacaaactttatttttaaaaa 30887859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 44626433 - 44626385
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatca 65  Q
    ||||||||| |||||||||| || |||||||||||||||||| ||||||    
T  44626433 agttttagtttttagccatgaatcactagatacaaattatagcatatca 44626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 34146412 - 34146361
Alignment:
Q  474 ttgaaatttttaacaattaattctcatcttatttatagagttttaactcttc 525  Q
    ||||||||||||||||||  | ||||||||||||||||| |||||| |||||    
T  34146412 ttgaaatttttaacaattgttactcatcttatttatagaattttaaatcttc 34146361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 38151065 - 38151014
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcaggga 261  Q
    ||||| |||| ||||  ||||||||||||||||||||| |||||||||||||    
T  38151065 ttaaccgtctgatggggtgacgtttaaatagctaaacgactgagggcaggga 38151014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 629 - 684
Target Start/End: Original strand, 44666218 - 44666273
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||||||||||||||||||  |||||| ||| ||||||| ||| |||||    
T  44666218 aattagttttattgaaaaagataagagaaattgagaaagggtataagtgagaaatc 44666273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 606 - 660
Target Start/End: Original strand, 45083036 - 45083091
Alignment:
Q  606 ttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataatt 660  Q
    ||||||||| ||||| || |||| |||||||||||||||||||||||||| |||||    
T  45083036 ttagttttccaaatacattacattaattagttttattgaaaaagataagagtaatt 45083091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 553 - 687
Target Start/End: Complemental strand, 11087261 - 11087120
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt-----taaaaaaccac--ctttagttttcaaatatataacatgaattagttttattgaaa 645  Q
    ||||||||||||||||||||| |||||||||  |||||||     |||||||  |   ||||  |||||||||| | || || ||||| ||||||||| |    
T  11087261 tttgtttaaatttgaagataataagaaacaagctttgtttaaaaataaaaaaataaaactttgtttttcaaatagacaatattaattaattttattgaga 11087162  T
Q  646 aagataagaataattgacaaatggtataattgacaaatcgta 687  Q
    ||||||||| ||||||  |||   ||||||||||||||||||    
T  11087161 aagataagagtaattggtaaaatttataattgacaaatcgta 11087120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 470 - 524
Target Start/End: Complemental strand, 16393915 - 16393861
Alignment:
Q  470 acacttgaaatttttaacaattaattctcatcttatttatagagttttaactctt 524  Q
    |||||||||||||||||| |||  | ||| ||||||||||||| |||||||||||    
T  16393915 acacttgaaatttttaacgattgctactcttcttatttatagaattttaactctt 16393861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 17497646 - 17497684
Alignment:
Q  383 acattagcttataataatttattattatcaatccataat 421  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  17497646 acattaacttataataattgattattatcaatccataat 17497684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 586 - 659
Target Start/End: Complemental strand, 36682652 - 36682579
Alignment:
Q  586 tttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagataagaataat 659  Q
    ||||||| ||||||  | |||||||||| |||||||||| ||| ||||||||||||| |||||||||||| ||||    
T  36682652 tttgtttaaaaaaataaactttagtttttcaaatatata-cattaattagttttattaaaaaagataagagtaat 36682579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 466 - 536
Target Start/End: Complemental strand, 38457512 - 38457442
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccatt 536  Q
    |||| ||||||||||||||||||| |  |  |||||||||||||| | |||||||||||| | ||||||||    
T  38457512 ctttgcacttgaaatttttaacaactgttgttcatcttatttataaaattttaactcttcttggaaccatt 38457442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 149; Significance: 4e-78; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 157 - 421
Target Start/End: Complemental strand, 30273 - 30009
Alignment:
Q  157 taactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacggctgagggc 256  Q
    ||||||||||||||| |||||||||||||||||||||||  | ||||  | | ||||| |||| |||| ||||||||||||||||||||||||||| ||     
T  30273 taactaccctcattccgtctagctttaggttttcacaatgttgttcattatacttaaccgtctgatggaatgacgtttaaatagctaaacggctgaaggt 30174  T
Q  257 agggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaattagtgcttaa 356  Q
    || ||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  30173 agagacctctcattggacttagctaaatggttcaatccatcacggtccatttagaaagaatagctcaatcacacatattcatcaactaattagtgtttaa 30074  T
Q  357 cacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||||||||| |||| |||||| ||| | |||| |||||||||||| |||||| ||||||||||||    
T  30073 cacaatagatcataatttataatataatattaacttataataattgattattgtcaatccataat 30009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 17 - 421
Target Start/End: Original strand, 39961 - 40356
Alignment:
Q  17 agttttagtgtttagccatggataactagatacaaattatagaatatcatcaattataatgaatg----aagaaactgtgtactttgaatgaattagggt 112  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| | ||| || |    |||||| ||||||  ||   ||||||||  |    
T  39961 agttttagtgtttagtcatggataactagatacaaattatagcatatcattaataacaataaaaggaataagaaattgtgtatatt---tgaattaga-t 40056  T
Q  113 tgaggaaggataaccaccgaccacgccgataactacgagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaatta 212  Q
    ||| ||||||||||| |||||         |||||  |||||||| ||||||||||||| |||||| |||| |||||||||||  | |||| || |||||    
T  40057 tgatgaaggataaccgccgac---------aactataagagggatgactaccctcattccgtctagttttatgttttcacaatgatgttcataataatta 40147  T
Q  213 actgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaa 312  Q
    || |||| |||| |||||| |||||||||| ||||||||||||||  ||| |||||| |||||||||||||||||||||| || ||||||||||||| ||    
T  40148 accgtctgatgggatgacggttaaatagcttaacggctgagggcaatgacctctcatcgggcttagctaaatggtccaactcagcacggtccatttaaaa 40247  T
Q  313 agaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatca 412  Q
    ||||||  ||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||| ||| | |||| |||||||||||| |||||| |||    
T  40248 agaataactcaatcacacatattcatcaactaattagtgcttagcacagtagaccataatttataatataatattaacttataataattgattattgtca 40347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 140; Significance: 9e-73; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 67912 - 67701
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  67912 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 67813  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    ||||||||||  ||||||||||||||||||||||||| |||| | || ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  67812 gaaagaatagcccaatcatacatattcatcaactaatgagtgttcaatacaatagaccatattataaattataacattaatttataataattgattattg 67713  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  67712 tcaatccataat 67701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 210 - 421
Target Start/End: Complemental strand, 60436 - 60225
Alignment:
Q  210 ttaactgtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccattta 309  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  60436 ttaaccgtctgatgggatgacgtttaaatagctaaacggctgagggcagggacctctcattgggcttagctaaatggtccaacccatcacggtccattta 60337  T
Q  310 gaaagaatagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattatta 409  Q
    | ||||||||  ||||||||||||||||||||||||| |||| | || ||||||||||||| | || ||||| ||||||  ||||||||||| ||||||     
T  60336 gtaagaatagcccaatcatacatattcatcaactaatgagtgttcaatacaatagaccatattataaattataacattaatttataataattgattattg 60237  T
Q  410 tcaatccataat 421  Q
    ||||||||||||    
T  60236 tcaatccataat 60225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1634 (Bit Score: 138; Significance: 1e-71; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 216 - 421
Target Start/End: Original strand, 36 - 241
Alignment:
Q  216 gtctcatggtatgacgtttaaatagctaaacggctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaaga 315  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  36 gtctgatgggatgacgtttaaatagttaaacggctgagggcagggacctctcatttggcttagctaaatggtccaacccatcacgatccatttagaaaga 135  T
Q  316 atagttcaatcatacatattcatcaactaattagtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatc 415  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| | || ||||| ||||||  ||||||||||| |||||| ||||||    
T  136 atagtccaatcatacatattcatcaactaatgagtgcttaatacaatagaccatattataaattataacattaatttataataattgattattgtcaatc 235  T
Q  416 cataat 421  Q
    ||||||    
T  236 cataat 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 129; Significance: 3e-66; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 149 - 421
Target Start/End: Original strand, 134490 - 134761
Alignment:
Q  149 gagagggataactaccctcattctgtctagctttaggttttcacaatactattcagaagaattaactgtctcatggtatgacgtttaaatagctaaacgg 248  Q
    |||||| ||||||||| |||||| || |||| ||||||||||| | || | |||||||  |||||| |||| |||| ||||||||||||||||||||||     
T  134490 gagaggaataactaccgtcattccgtttagcgttaggttttcagagta-tgttcagaatgattaaccgtctgatggaatgacgtttaaatagctaaacga 134588  T
Q  249 ctgagggcagggacatctcattgggcttagctaaatggtccaacccatcacggtccatttagaaagaatagttcaatcatacatattcatcaactaatta 348  Q
    ||||||  |||||| |||||||||||||| ||||||||| |||||||||||||||||||||| || |||||| ||||||  | ||||||||||||||| |    
T  134589 ctgaggctagggacctctcattgggcttatctaaatggttcaacccatcacggtccatttagtaacaatagtccaatcactcgtattcatcaactaatca 134688  T
Q  349 gtgcttaacacaatagaccatagtttatattatgacattagcttataataatttattattatcaatccataat 421  Q
    ||| |||||| |||| |||||| |||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  134689 gtgtttaacagaatataccataatttatattataagattaacttataataaattattattatcaatccataat 134761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 92; Significance: 4e-44; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 480 - 690
Target Start/End: Complemental strand, 584 - 375
Alignment:
Q  480 tttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagataacaaga 578  Q
    |||||||||| || | ||||| ||||||||||| |||||||||||| |  ||| ||||| ||||||       ||| |||||||||||||||| ||||||    
T  584 tttttaacaagtactactcatgttatttatagaattttaactcttcatgaaactattatcatagataacaaaattttgtttaaatttgaagatgacaaga 485  T
Q  579 aacaaattttgttttaaaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattga 678  Q
    ||||||||||||||||||| |  | |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||| |||||    
T  484 aacaaattttgttttaaaaca--aactttagttttcaaatatataacattaattagttttattgaaaattataagaataattgacaaagggtatgattga 387  T
Q  679 caaatcgtaccc 690  Q
     ||||| |||||    
T  386 aaaatcataccc 375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 73; Significance: 9e-33; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 496 - 667
Target Start/End: Original strand, 46481 - 46651
Alignment:
Q  496 ctcatcttatttatagagttttaactcttcgttgaaccattattatagatnnnnnnnttt-gtttaaatttgaagataacaagaaacaaattttgtttta 594  Q
    ||||| ||||||||||| |||||||||||| | |||| ||||| ||||||       ||| |||||||||||||||| |||||||||||||||||||||     
T  46481 ctcatgttatttatagaattttaactcttcatggaactattatcatagataacaaaattttgtttaaatttgaagatgacaagaaacaaattttgtttt- 46579  T
Q  595 aaaaaccacctttagttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaat 667  Q
     ||||| | ||||| |||||||||||||| ||| ||||| ||||||||||||  |||||||||||||||||||    
T  46580 -aaaacaaactttaattttcaaatatatagcattaattaattttattgaaaattataagaataattgacaaat 46651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 2e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 553 - 688
Target Start/End: Complemental strand, 256871 - 256736
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttttaaaaaaccacctttagtttt-caaatatataacatgaattagttttattgaaaaagata 651  Q
    |||||||||| ||||||||||||||||||||  | |  |||||||||  | |||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  256871 tttgtttaaaattgaagataacaagaaacaacctat-atttaaaaaaaaaactttagttttccaaatagataacattaattagttttattgaaaaagata 256773  T
Q  652 agaataattgacaaatggtataattgacaaatcgtac 688  Q
    |||  ||||||||||||||||||||||||||| ||||    
T  256772 agagaaattgacaaatggtataattgacaaatggtac 256736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 553 - 594
Target Start/End: Original strand, 272310 - 272351
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgtttta 594  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  272310 tttgtttaaatttgaagataataagaaacaaattttgtttta 272351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 594 - 690
Target Start/End: Complemental strand, 15005 - 14909
Alignment:
Q  594 aaaaaaccacctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtaccc 690  Q
    ||||||| | ||||||||||| ||||||||||||| |||||||||||||| ||||||| ||  ||||||||||| ||||||||||||||||| |||||    
T  15005 aaaaaactaactttagttttccaaatatataacattaattagttttattg-aaaagatgagggtaattgacaaaaggtataattgacaaatcataccc 14909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 629 - 689
Target Start/End: Complemental strand, 922 - 862
Alignment:
Q  629 aattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatcgtacc 689  Q
    ||||||||| |||||||||||||| | ||||||| ||| ||||||||||||||||||||||    
T  922 aattagtttcattgaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtacc 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 480 - 545
Target Start/End: Original strand, 6296 - 6361
Alignment:
Q  480 tttttaacaattaattctcatcttatttatagagttttaactcttcgttgaaccattattatagat 545  Q
    ||||||||||||| | || |||||||||||||| |||||||| ||| |  ||||||||||||||||    
T  6296 tttttaacaattactactaatcttatttatagaattttaactattcatgaaaccattattatagat 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 604 - 684
Target Start/End: Original strand, 6402 - 6483
Alignment:
Q  604 ctttagttttc-aaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataattgacaaatc 684  Q
    ||||||||||| ||||||||||||  ||||| ||||||||||||| |||  | ||||||||||| | ||||||||| |||||    
T  6402 ctttagttttccaaatatataacaataattaattttattgaaaaacatagaagtaattgacaaaggatataattgataaatc 6483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1801 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold1801
Description:

Target: scaffold1801; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 553 - 638
Target Start/End: Complemental strand, 1323 - 1236
Alignment:
Q  553 tttgtttaaatttgaagataacaagaaacaaattttgttt-taaaaaaccacctttagtttt-caaatatataacatgaattagtttt 638  Q
    |||||| |||||| |||||| ||||||||||| |||||||  ||||||| | |||||||||| |||||| ||| ||| ||||||||||    
T  1323 tttgttcaaatttaaagatatcaagaaacaaactttgtttaaaaaaaacaaactttagttttccaaataaatagcattaattagtttt 1236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 368 - 322
Alignment:
Q  466 ctttacacttgaaatttttaacaattaattctcatcttatttataga 512  Q
    |||| ||||||||||||||||| |||| | |||||||||||||||||    
T  368 ctttgcacttgaaatttttaacgattactactcatcttatttataga 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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