View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11758_low_32 (Length: 368)
Name: NF11758_low_32
Description: NF11758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11758_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 356
Target Start/End: Complemental strand, 10596197 - 10595860
Alignment:
| Q |
19 |
cacccttcacattaaagggcaaccatccactccacattcttggctcaacttttggctgcacatcagcatttggccttttatcatgtaacattttatcctg |
118 |
Q |
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| T |
10596197 |
cacccttcacatcaaagggcaaccatccactccacattcttggctcaacttttggctgcacatcagcatttggccttttatcatgtaacaatttatcctg |
10596098 |
T |
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| Q |
119 |
ctcatccaccttaaaattttccggttgtttgttaccataatactctggtggaatccaagccaaagggtatggaaaattcctaaactgaattggaaccata |
218 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10596097 |
ctcatccaccttaaaactttccggttgtttgttaccataatactctggttgaatccaagccaaagggtatggaaaattcctaaactgaattggaaccata |
10595998 |
T |
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| Q |
219 |
gcatcattctctttcttaccaacatcaggtttttgctcttccaccttcacagatttgtcttccctttggctgcatgaatgattagaacagccacaacaat |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
10595997 |
gcatcattctctttcttaccaacatcaggtttttgctcttccaccttcacagatttgtcttccttttggctgcatgaatgattagaacagccacaacaat |
10595898 |
T |
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| Q |
319 |
gatgttcccttggcatatatttatcatactcgtatctc |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
10595897 |
gatgttcccttggcatatatttatcatactcgtatctc |
10595860 |
T |
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