View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11759_low_3 (Length: 329)
Name: NF11759_low_3
Description: NF11759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11759_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 2819707 - 2819388
Alignment:
| Q |
1 |
tttggtttccctttatcaccttgaagtgtgatctcaactaatgtagctggaggtgttccaatgagtccattgcaagctaatcttccatcacaatccccag |
100 |
Q |
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| T |
2819707 |
tttggtctccctttatcaccttgaagtgtgatttcaactaatgtagctggaggtgttccaatgagtccattgcaagctaatcttccatcacaatccccag |
2819608 |
T |
|
| Q |
101 |
tttcacaagatggtttccaattatttgaagcaaaattgcaacctgttctagcccaaattctaccactccatgaccatggtgctagaattttctttgtttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2819607 |
tttcacaagatggtttccaattatttgaagcaaaattgcaacctgttctagcccaaattctaccactccatgaccatggtgctagaattttctttgtttg |
2819508 |
T |
|
| Q |
201 |
gcctgaaggaaggtagaatccaccatctgctataattggttgaccagtgtttggtgctgttgctggccatattggaaagggacatttattgtgtatatag |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
2819507 |
gcctgaaggaaggtagaatccaccatctgctataattggttgaccagtgtttggtgctgttgcaggccatattggaaagggacatttattgtgtatatag |
2819408 |
T |
|
| Q |
301 |
aatgttgcttgatgtccatc |
320 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
2819407 |
aatgttgcttgatgtccatc |
2819388 |
T |
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