View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1175_low_20 (Length: 305)
Name: NF1175_low_20
Description: NF1175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1175_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 67 - 244
Target Start/End: Complemental strand, 6315310 - 6315133
Alignment:
| Q |
67 |
ctgttgccatatgacaagtacccctgttgtggttttttccatctactatatgcctcgtgttaatctccaaattctaagtattttgctgctttttcttttg |
166 |
Q |
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| T |
6315310 |
ctgttgccatatgacaagtacccctgttgtggtcttttccatctactatatgcctcgtgttaatctccaaattctaagtattttgctgctttttcttttg |
6315211 |
T |
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| Q |
167 |
ccatttcaaaacaacagggaactaaatagcttgttggattgttgccaggcatattccaaagctgcttacttcttctct |
244 |
Q |
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| T |
6315210 |
ccatttcaaaacaacagggaactaaatagcttgttggattgttgccaggcatattccaaagctgcttacttcttctct |
6315133 |
T |
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