View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1175_low_3 (Length: 922)

Name: NF1175_low_3
Description: NF1175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1175_low_3
NF1175_low_3
[»] chr7 (80 HSPs)
chr7 (3-430)||(13750007-13750434)
chr7 (643-914)||(13750706-13750976)
chr7 (492-673)||(13750495-13750676)
chr7 (530-691)||(44748460-44748621)
chr7 (498-673)||(45399871-45400050)
chr7 (494-673)||(43961011-43961191)
chr7 (492-673)||(18788415-18788600)
chr7 (531-690)||(26005412-26005571)
chr7 (531-673)||(9392713-9392855)
chr7 (531-673)||(43113752-43113894)
chr7 (492-673)||(43962430-43962609)
chr7 (492-673)||(18787226-18787411)
chr7 (306-420)||(40739077-40739191)
chr7 (531-673)||(9391597-9391739)
chr7 (531-673)||(44417535-44417677)
chr7 (530-673)||(19217705-19217848)
chr7 (705-796)||(13748072-13748159)
chr7 (531-673)||(44420421-44420562)
chr7 (531-673)||(48793414-48793556)
chr7 (531-691)||(43114985-43115144)
chr7 (530-673)||(29187927-29188070)
chr7 (535-673)||(29186742-29186880)
chr7 (541-673)||(7011711-7011844)
chr7 (541-673)||(7027069-7027202)
chr7 (541-673)||(27072562-27072694)
chr7 (541-673)||(27205619-27205751)
chr7 (548-668)||(44746809-44746929)
chr7 (550-673)||(3537504-3537627)
chr7 (492-672)||(37237083-37237264)
chr7 (642-691)||(9391519-9391568)
chr7 (531-673)||(13597222-13597363)
chr7 (642-691)||(19217627-19217676)
chr7 (642-691)||(43962638-43962687)
chr7 (642-691)||(44417457-44417506)
chr7 (642-691)||(48792443-48792492)
chr7 (535-673)||(48792521-48792659)
chr7 (642-691)||(48793585-48793634)
chr7 (642-690)||(7057398-7057446)
chr7 (222-297)||(43006678-43006753)
chr7 (561-673)||(44230505-44230617)
chr7 (642-688)||(3537429-3537475)
chr7 (621-687)||(13599246-13599312)
chr7 (642-691)||(3538632-3538681)
chr7 (642-691)||(29186664-29186713)
chr7 (642-691)||(42611435-42611484)
chr7 (642-691)||(43113674-43113723)
chr7 (642-691)||(43960945-43960994)
chr7 (642-691)||(44231911-44231960)
chr7 (642-691)||(45688867-45688916)
chr7 (642-691)||(19008931-19008980)
chr7 (642-691)||(26006812-26006861)
chr7 (642-691)||(27071020-27071069)
chr7 (642-691)||(27207244-27207293)
chr7 (642-691)||(29188099-29188148)
chr7 (642-691)||(32519818-32519867)
chr7 (643-691)||(7011633-7011681)
chr7 (643-691)||(7026991-7027039)
chr7 (534-602)||(13599158-13599226)
chr7 (619-691)||(13749063-13749135)
chr7 (643-691)||(27072724-27072772)
chr7 (643-691)||(27205541-27205589)
chr7 (812-884)||(13748182-13748253)
chr7 (648-691)||(18788635-18788678)
chr7 (548-603)||(32518560-32518615)
chr7 (618-672)||(32519734-32519788)
chr7 (623-673)||(37235891-37235941)
chr7 (642-691)||(19016766-19016815)
chr7 (650-691)||(37235813-37235854)
chr7 (650-691)||(37237302-37237343)
chr7 (642-691)||(44420591-44420640)
chr7 (214-297)||(22745382-22745465)
chr7 (648-691)||(44230427-44230470)
chr7 (616-673)||(12630641-12630699)
chr7 (658-688)||(45400095-45400125)
chr7 (654-691)||(8661678-8661715)
chr7 (650-691)||(9392892-9392933)
chr7 (642-691)||(13597144-13597193)
chr7 (653-690)||(18787149-18787186)
chr7 (650-691)||(24653748-24653789)
chr7 (643-688)||(44746729-44746774)
[»] chr4 (54 HSPs)
chr4 (3-258)||(56234531-56234786)
chr4 (492-673)||(22621945-22622127)
chr4 (531-673)||(7261441-7261583)
chr4 (531-673)||(38032318-38032460)
chr4 (509-673)||(22623018-22623183)
chr4 (530-673)||(38031246-38031389)
chr4 (492-673)||(17356439-17356624)
chr4 (531-673)||(34095557-34095699)
chr4 (534-673)||(10802967-10803106)
chr4 (531-670)||(10804093-10804232)
chr4 (531-673)||(8815255-8815397)
chr4 (368-427)||(56234781-56234840)
chr4 (550-673)||(48499442-48499565)
chr4 (616-673)||(56233802-56233859)
chr4 (303-387)||(7989141-7989225)
chr4 (531-640)||(35927014-35927123)
chr4 (531-673)||(23757868-23758011)
chr4 (642-691)||(10804264-10804313)
chr4 (531-673)||(48501222-48501363)
chr4 (548-673)||(8814213-8814337)
chr4 (642-688)||(17357932-17357978)
chr4 (642-691)||(10802889-10802938)
chr4 (531-673)||(18091658-18091800)
chr4 (642-691)||(22621867-22621916)
chr4 (642-691)||(34121299-34121348)
chr4 (642-691)||(34122871-34122920)
chr4 (616-673)||(35193179-35193236)
chr4 (531-604)||(36074692-36074765)
chr4 (642-691)||(38031168-38031217)
chr4 (642-691)||(38032489-38032538)
chr4 (642-691)||(48463053-48463102)
chr4 (643-691)||(7261613-7261661)
chr4 (643-691)||(17356361-17356409)
chr4 (492-671)||(56234875-56235058)
chr4 (652-691)||(22624389-22624428)
chr4 (531-602)||(35925840-35925911)
chr4 (642-691)||(8815426-8815475)
chr4 (620-673)||(17357850-17357903)
chr4 (650-691)||(18091580-18091621)
chr4 (642-691)||(35191817-35191866)
chr4 (616-668)||(35191900-35191952)
chr4 (222-297)||(1273167-1273242)
chr4 (530-670)||(5433304-5433444)
chr4 (648-691)||(8814135-8814178)
chr4 (642-689)||(48081396-48081443)
chr4 (650-691)||(48080270-48080311)
chr4 (642-691)||(56233724-56233773)
chr4 (643-691)||(56235090-56235138)
chr4 (642-689)||(35193265-35193312)
chr4 (214-297)||(55953107-55953190)
chr4 (648-690)||(23758046-23758088)
chr4 (642-688)||(48081659-48081705)
chr4 (642-688)||(48499367-48499413)
chr4 (650-691)||(5574200-5574241)
[»] chr6 (29 HSPs)
chr6 (492-673)||(34996619-34996801)
chr6 (492-672)||(3000654-3000832)
chr6 (492-673)||(32348894-32349077)
chr6 (492-668)||(34995434-34995614)
chr6 (505-669)||(32712437-32712602)
chr6 (531-673)||(32347886-32348028)
chr6 (531-673)||(32713781-32713923)
chr6 (531-673)||(11801240-11801382)
chr6 (306-420)||(29466282-29466396)
chr6 (531-673)||(18572963-18573104)
chr6 (642-691)||(29477759-29477808)
chr6 (642-691)||(11801411-11801460)
chr6 (642-691)||(18572885-18572934)
chr6 (642-691)||(18574362-18574411)
chr6 (642-691)||(32349106-32349155)
chr6 (541-603)||(21094553-21094615)
chr6 (642-688)||(32712358-32712404)
chr6 (642-691)||(3000862-3000911)
chr6 (534-603)||(19383056-19383124)
chr6 (616-673)||(29479177-29479234)
chr6 (642-691)||(34995352-34995401)
chr6 (648-688)||(19383222-19383262)
chr6 (548-603)||(27719883-27719938)
chr6 (648-691)||(29479269-29479312)
chr6 (541-602)||(21095287-21095348)
chr6 (642-691)||(32347808-32347857)
chr6 (642-691)||(32713952-32714001)
chr6 (214-297)||(8411418-8411501)
chr6 (648-689)||(34996836-34996877)
[»] chr1 (43 HSPs)
chr1 (492-691)||(52761453-52761654)
chr1 (530-673)||(7110304-7110447)
chr1 (531-673)||(7111373-7111515)
chr1 (492-673)||(45229461-45229643)
chr1 (530-673)||(51693225-51693368)
chr1 (531-673)||(51468417-51468559)
chr1 (306-420)||(6242139-6242253)
chr1 (505-673)||(17244253-17244425)
chr1 (535-673)||(52086705-52086841)
chr1 (548-668)||(5488782-5488902)
chr1 (550-673)||(50484913-50485036)
chr1 (531-673)||(51468799-51468941)
chr1 (564-673)||(5488579-5488688)
chr1 (495-603)||(21203159-21203271)
chr1 (492-668)||(45228358-45228539)
chr1 (531-673)||(38235048-38235189)
chr1 (564-670)||(40187683-40187789)
chr1 (642-691)||(52086627-52086676)
chr1 (564-673)||(18819340-18819449)
chr1 (642-690)||(25181502-25181550)
chr1 (648-691)||(1823367-1823410)
chr1 (642-691)||(18820825-18820874)
chr1 (642-691)||(51468339-51468388)
chr1 (642-691)||(51693147-51693196)
chr1 (531-673)||(52759441-52759583)
chr1 (650-691)||(7110226-7110267)
chr1 (650-691)||(52759363-52759404)
chr1 (564-669)||(1823227-1823331)
chr1 (648-691)||(5488942-5488985)
chr1 (383-422)||(45228698-45228737)
chr1 (642-685)||(50485065-50485108)
chr1 (642-688)||(45229672-45229718)
chr1 (642-691)||(17244175-17244224)
chr1 (642-691)||(17245733-17245782)
chr1 (642-691)||(40187603-40187652)
chr1 (642-687)||(47532961-47533006)
chr1 (642-691)||(51468970-51469019)
chr1 (643-691)||(18819262-18819310)
chr1 (616-668)||(50483593-50483645)
chr1 (548-603)||(1822057-1822112)
chr1 (643-690)||(5488502-5488549)
chr1 (619-673)||(17245651-17245704)
chr1 (616-665)||(52087757-52087806)
[»] chr3 (91 HSPs)
chr3 (492-691)||(35758064-35758266)
chr3 (530-673)||(28777584-28777727)
chr3 (505-670)||(47431058-47431224)
chr3 (531-673)||(28776526-28776668)
chr3 (505-673)||(46903495-46903664)
chr3 (531-673)||(31937113-31937255)
chr3 (531-668)||(37610661-37610798)
chr3 (550-673)||(31938224-31938347)
chr3 (530-673)||(46902409-46902552)
chr3 (531-673)||(2233203-2233345)
chr3 (494-673)||(35759088-35759271)
chr3 (534-673)||(5689797-5689936)
chr3 (531-673)||(43393951-43394094)
chr3 (531-673)||(17740908-17741050)
chr3 (531-673)||(19042228-19042370)
chr3 (531-673)||(37609399-37609541)
chr3 (531-673)||(21729086-21729228)
chr3 (531-665)||(52522013-52522146)
chr3 (564-673)||(54353101-54353210)
chr3 (642-691)||(10979244-10979293)
chr3 (642-691)||(11348540-11348589)
chr3 (531-673)||(17116280-17116421)
chr3 (642-691)||(31937035-31937084)
chr3 (642-691)||(31938376-31938425)
chr3 (642-691)||(34014508-34014557)
chr3 (534-602)||(47429771-47429839)
chr3 (642-689)||(43394123-43394170)
chr3 (531-667)||(47917511-47917647)
chr3 (531-670)||(11346893-11347032)
chr3 (648-690)||(35759306-35759348)
chr3 (642-691)||(2232602-2232651)
chr3 (531-673)||(2232680-2232822)
chr3 (642-691)||(17116202-17116251)
chr3 (642-691)||(17117468-17117517)
chr3 (616-673)||(17742276-17742333)
chr3 (616-673)||(19043596-19043653)
chr3 (642-691)||(21727910-21727959)
chr3 (531-673)||(23073272-23073414)
chr3 (642-691)||(23073443-23073492)
chr3 (642-691)||(24376497-24376546)
chr3 (642-691)||(28777756-28777805)
chr3 (642-691)||(53101842-53101891)
chr3 (616-673)||(53765949-53766006)
chr3 (616-673)||(54354374-54354431)
chr3 (648-688)||(5691169-5691209)
chr3 (550-663)||(10978093-10978206)
chr3 (648-688)||(37610801-37610841)
chr3 (616-672)||(52525342-52525398)
chr3 (642-690)||(53766035-53766083)
chr3 (648-691)||(2233380-2233423)
chr3 (548-668)||(53180719-53180839)
chr3 (642-688)||(46902334-46902380)
chr3 (642-688)||(55209785-55209831)
chr3 (619-673)||(55209860-55209914)
chr3 (620-673)||(21727988-21728041)
chr3 (642-691)||(23091191-23091240)
chr3 (621-673)||(33113306-33113359)
chr3 (642-687)||(43392630-43392675)
chr3 (616-673)||(50881092-50881149)
chr3 (616-673)||(53764506-53764563)
chr3 (650-691)||(54354468-54354509)
chr3 (564-673)||(5691026-5691134)
chr3 (650-690)||(37609322-37609362)
chr3 (642-690)||(47429628-47429676)
chr3 (531-656)||(50879782-50879907)
chr3 (643-691)||(50881179-50881227)
chr3 (643-691)||(53178701-53178749)
chr3 (618-670)||(53178782-53178834)
chr3 (643-691)||(54353023-54353071)
chr3 (505-670)||(11348340-11348508)
chr3 (636-691)||(46986153-46986208)
chr3 (642-689)||(52525428-52525475)
chr3 (619-670)||(55210894-55210945)
chr3 (650-688)||(15290566-15290604)
chr3 (642-688)||(52521930-52521976)
chr3 (642-691)||(17742362-17742411)
chr3 (642-691)||(19043682-19043731)
chr3 (620-669)||(23091273-23091322)
chr3 (642-691)||(34015837-34015886)
chr3 (642-691)||(46903693-46903742)
chr3 (650-690)||(11346813-11346853)
chr3 (642-689)||(33113379-33113426)
chr3 (643-690)||(53180874-53180920)
chr3 (648-690)||(27749107-27749149)
chr3 (616-658)||(47429713-47429755)
chr3 (639-689)||(53101545-53101594)
chr3 (531-601)||(55209931-55210001)
chr3 (650-691)||(5689725-5689766)
chr3 (642-691)||(27750500-27750549)
chr3 (531-604)||(33111743-33111816)
chr3 (650-691)||(44116763-44116804)
[»] chr5 (34 HSPs)
chr5 (530-670)||(19228919-19229059)
chr5 (496-669)||(12372396-12372573)
chr5 (531-673)||(19229971-19230113)
chr5 (531-691)||(4031881-4032043)
chr5 (492-669)||(6803480-6803660)
chr5 (564-673)||(9083227-9083336)
chr5 (531-689)||(4032923-4033081)
chr5 (616-673)||(9082057-9082114)
chr5 (642-691)||(13276819-13276868)
chr5 (531-673)||(13278129-13278271)
chr5 (531-673)||(39349558-39349700)
chr5 (548-673)||(18655567-18655692)
chr5 (618-673)||(13276897-13276952)
chr5 (550-673)||(39350562-39350685)
chr5 (642-691)||(8447077-8447126)
chr5 (642-691)||(12372314-12372363)
chr5 (620-673)||(12373708-12373761)
chr5 (642-691)||(18654296-18654345)
chr5 (548-673)||(18654374-18654500)
chr5 (642-691)||(18655721-18655770)
chr5 (642-689)||(19228840-19228887)
chr5 (618-673)||(39164134-39164188)
chr5 (648-691)||(39350720-39350763)
chr5 (530-603)||(12373614-12373687)
chr5 (642-691)||(19230142-19230191)
chr5 (642-691)||(39349480-39349529)
chr5 (648-691)||(12373796-12373839)
chr5 (650-691)||(6803701-6803742)
chr5 (643-691)||(9081979-9082027)
chr5 (653-688)||(6801977-6802012)
chr5 (643-690)||(25001643-25001690)
chr5 (642-688)||(13278300-13278346)
chr5 (642-691)||(9083365-9083414)
chr5 (642-691)||(35952505-35952554)
[»] chr8 (38 HSPs)
chr8 (492-668)||(30640880-30641060)
chr8 (492-667)||(26366049-26366228)
chr8 (492-668)||(26364824-26365001)
chr8 (507-673)||(521970-522137)
chr8 (492-669)||(30644563-30644740)
chr8 (531-673)||(41636909-41637051)
chr8 (530-673)||(9245328-9245471)
chr8 (535-673)||(9244143-9244281)
chr8 (371-422)||(26365839-26365890)
chr8 (531-673)||(20309001-20309143)
chr8 (531-673)||(21095634-21095776)
chr8 (642-691)||(26364741-26364790)
chr8 (505-673)||(43584486-43584655)
chr8 (648-691)||(20308923-20308966)
chr8 (648-691)||(21095556-21095599)
chr8 (541-673)||(34642743-34642874)
chr8 (648-691)||(41638227-41638270)
chr8 (642-691)||(3714589-3714638)
chr8 (642-691)||(9244065-9244114)
chr8 (616-673)||(41638135-41638192)
chr8 (618-673)||(20310037-20310092)
chr8 (618-673)||(21096670-21096725)
chr8 (642-689)||(34642667-34642714)
chr8 (642-691)||(20310121-20310170)
chr8 (642-691)||(21096754-21096803)
chr8 (642-690)||(522166-522214)
chr8 (643-691)||(43584408-43584456)
chr8 (642-688)||(30640801-30640847)
chr8 (650-688)||(43586021-43586059)
chr8 (650-691)||(26366271-26366312)
chr8 (642-691)||(31202966-31203015)
chr8 (642-691)||(43134118-43134167)
chr8 (643-690)||(34644029-34644076)
chr8 (128-209)||(44189679-44189752)
chr8 (642-691)||(9245500-9245550)
chr8 (654-691)||(22012157-22012194)
chr8 (654-691)||(22013320-22013357)
chr8 (642-691)||(41636831-41636880)
[»] scaffold0878 (3 HSPs)
scaffold0878 (492-673)||(2879-3067)
scaffold0878 (492-673)||(1847-2031)
scaffold0878 (642-691)||(3096-3145)
[»] chr2 (23 HSPs)
chr2 (492-673)||(27892191-27892376)
chr2 (531-673)||(16602803-16602945)
chr2 (492-673)||(27891184-27891369)
chr2 (642-691)||(27891106-27891155)
chr2 (642-691)||(27892405-27892454)
chr2 (357-430)||(27948827-27948905)
chr2 (620-673)||(38243942-38243995)
chr2 (561-670)||(23833048-23833157)
chr2 (643-691)||(23833940-23833988)
chr2 (306-387)||(3604422-3604503)
chr2 (642-691)||(16604258-16604307)
chr2 (642-691)||(38244024-38244073)
chr2 (642-691)||(16602725-16602774)
chr2 (642-690)||(19577395-19577443)
chr2 (648-691)||(43814521-43814564)
chr2 (650-691)||(5034893-5034934)
chr2 (620-669)||(38242965-38243014)
chr2 (618-673)||(26388296-26388351)
chr2 (492-581)||(5033629-5033721)
chr2 (649-691)||(23832968-23833010)
chr2 (643-689)||(26388220-26388266)
chr2 (642-688)||(43814650-43814696)
chr2 (642-691)||(5033478-5033527)
[»] scaffold0141 (4 HSPs)
scaffold0141 (550-673)||(31111-31234)
scaffold0141 (550-673)||(35202-35325)
scaffold0141 (642-691)||(31033-31082)
scaffold0141 (642-691)||(35354-35403)
[»] scaffold0049 (4 HSPs)
scaffold0049 (550-673)||(79487-79610)
scaffold0049 (550-673)||(83578-83701)
scaffold0049 (642-691)||(83730-83779)
scaffold0049 (642-691)||(79409-79458)
[»] scaffold1425 (3 HSPs)
scaffold1425 (642-691)||(1670-1719)
scaffold1425 (643-691)||(134-182)
scaffold1425 (531-673)||(1499-1641)
[»] scaffold0018 (3 HSPs)
scaffold0018 (642-691)||(25414-25463)
scaffold0018 (620-673)||(25332-25385)
scaffold0018 (541-602)||(25252-25313)
[»] scaffold0026 (2 HSPs)
scaffold0026 (505-597)||(104405-104501)
scaffold0026 (642-691)||(104301-104350)
[»] scaffold0349 (1 HSPs)
scaffold0349 (548-603)||(9305-9360)


Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 3 - 430
Target Start/End: Original strand, 13750007 - 13750434
Alignment:
Q  3 aggttgagatgtaaatcatataccgtgatgctgtgcgttttggaaataaatgaagttgttgatttttgttgggatttggctgggaatatgaagaaactaa 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13750007 aggttgagctgtaaatcatataccgtgatgctgtgcgttttggaaataaatgaagttgttgaatttttttgggatttggctgggaatatgaagaaactaa 13750106  T
Q  103 agggttaggtgttttgaactggagaagatgcaacttctggagtagccccgcataatttctcatataagttgttggctgttggcattcactctacaaaatt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13750107 agggttaggtgttttgaactggagaagatgcaacttctggagtagccccgcataatttctcatataagttgttggccgttggcattcactctacaaaatt 13750206  T
Q  203 aaaggataaattgaggtagatgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaattttactgg 302  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13750207 aaaggataaattgagttagatgatgatggtggtgtttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaattttactgg 13750306  T
Q  303 aataacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaagacatgaatattggggt 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13750307 aataacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaactaatgggtttttgagagaagaagacatgaatattggggt 13750406  T
Q  403 tttaaaagcataatttgatgaagatgat 430  Q
    ||||||||||||||||||||||||||||    
T  13750407 tttaaaagcataatttgatgaagatgat 13750434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 643 - 914
Target Start/End: Original strand, 13750706 - 13750976
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagccnnnnnnnnnnnnntgttcttcgtccccaactacatatataatctccaaatc 742  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||    
T  13750706 caaattgaataaaagaaataagttaagggaccggcagatcaattaagccagaaaaaaaaga-tgttcttcgtccccaactacatatataatctccaaatc 13750804  T
Q  743 gttctcctgttcaaatcagcagccacacctcaacaattcaaatacttctttacagnnnnnnnnaggagctgcaacaaattgattctttgcactttgaaaa 842  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  13750805 gttctcctgttcaaatcagcagccacacctcaacaattcaaatacttctttacagttttttttaggagctgcaacaaattgattctttgcactttgaaaa 13750904  T
Q  843 ggtnnnnnnntgaaatctggattctttgaattttcccaatagaaccacagtgtttctcttcgtattcatctc 914  Q
    |||       ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13750905 ggtaaaaaaatgaaatctggattctttgaattttcccaatagaaccacagtgtttctcttcatattcatctc 13750976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 13750495 - 13750676
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacctt 591  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13750495 ttatgaagatgaagaaggatgaatgtatatgaagatatagaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacctt 13750594  T
Q  592 cgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||  |||       ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13750595 cgtaatccaacggtctgtttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 13750676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 530 - 691
Target Start/End: Original strand, 44748460 - 44748621
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||||||||||||||   ||        ||||||||||||||    
T  44748460 ggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaatt 44748559  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||| ||| | |||||||||||||||| ||||||||| |||||||| ||||||||    
T  44748560 atcaaaattggaccatattgaataaaagaaataaattaagggactggcagatcgattaagcc 44748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 498 - 673
Target Start/End: Original strand, 45399871 - 45400050
Alignment:
Q  498 agatgaagaaggatgaatgtatatgaagat-acg---gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcg 593  Q
    |||||| |||||||||||||| |||||||| | |   |||||||| ||||||| ||||||||| || |  |||||||||||||||||| |||||||||||    
T  45399871 agatgatgaaggatgaatgtagatgaagatgaaggaagaagaagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcg 45399970  T
Q  594 taatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  ||        ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  45399971 taatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaagtaaataaaagaaataagttaagggac 45400050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 494 - 673
Target Start/End: Complemental strand, 43961191 - 43961011
Alignment:
Q  494 atgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttc 592  Q
    ||||||||||  |||||||| |||| |||||||| | ||||||||| ||||||| ||||||||| || |  |||||||||||||||||| |||||||||     
T  43961191 atgaagatgataaaggatgagtgtagatgaagatgagggaagaagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttt 43961092  T
Q  593 gtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||  |||       || ||||||||||||||||||||||  |||| |||||||||||||||| |||||||||    
T  43961091 gtaatccaacggtctgtttttgtagaggattaaaattatcaaaattggatcaaattgaataaaagaaataaattaagggac 43961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 18788415 - 18788600
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaa---gaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||| |||||||  ||||||||||||| |||||||| | ||||   ||||| ||||||| ||||||||| || || ||||||| |||||||||| |||||    
T  18788415 ttattaagatgataaaggatgaatgtagatgaagatgagggaaagagaagaagaaagtaaataaattaggtgttggtgatacattataaaatctgataga 18788514  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||  ||        || |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  18788515 ccttcgtaatccaacggtctatttttttagaggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 18788600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 690
Target Start/End: Complemental strand, 26005571 - 26005412
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||| || ||||||| ||||||||  || || |||||||||||||||||| ||||||||| |||||||||||  ||        || ||| ||||||||    
T  26005571 gaagatgaagaaagtacataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaatta 26005472  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26005471 tcaaaattgaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 26005412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 9392713 - 9392855
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| ||  | |||||||||||||||||| ||||||||  |||||||||||  ||        |||||||||||||||    
T  9392713 gaagaagaagaaagtaaataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaatta 9392812  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  9392813 tcaaaattggaccaaattgaataaaagaaataagttaagggac 9392855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 43113894 - 43113752
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||| | ||||||||| || || |||||||||||||||||| ||||||||  |||||||||||  ||        |||||||||||||||    
T  43113894 gaagaagaagaaagcaaataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaatta 43113795  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  43113794 tcaaaattggaccaaattgaataaaagaaataagttaagggac 43113752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 43962430 - 43962609
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacctt 591  Q
    |||||||||||| |||||||||||||| |||| |  |  |||||||| ||||| | ||||||||| || |  ||||| |||||||||||| |||||||||    
T  43962430 ttatgaagatgatgaaggatgaatgtagatgagggaa--gaagaagaagaaaggaaataaattaggtgttagtgatatactataaaatctgatagacctt 43962527  T
Q  592 cgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||  |||       ||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  43962528 cgtaatccaacggtctgtttttttagatgattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggac 43962609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 492 - 673
Target Start/End: Complemental strand, 18787411 - 18787226
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||| |||||||| ||||| ||||| ||  ||    ||||||| ||||||| ||||||||  || || |||||||| ||||||||| ||| |    
T  18787411 ttatgaagatgatgaaggatggatgtagatgaatatgagggaagaagaagaagaaagtaaataaattaagtgttggtgatacaccataaaatctgataaa 18787312  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||| ||||||||||||  ||        ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  18787311 cctccgtaatccaacggtctatttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 18787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 306 - 420
Target Start/End: Complemental strand, 40739191 - 40739077
Alignment:
Q  306 aacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaagacatgaatattggggtttt 405  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||    ||||||| |||||| ||||||||||||||||||||||| |||||| ||||    
T  40739191 aacatgatgaaggaagaagcaaagatccaagatggaaattcataaatgggcatcgaaataatggttttttgagagaagaagacatgaagattgggttttt 40739092  T
Q  406 aaaagcataatttga 420  Q
    |||| ||||||||||    
T  40739091 aaaaacataatttga 40739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 9391739 - 9391597
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||| | || ||||||||||||||||||||| |||||||||||||||||||||  ||        |  ||||||||||||    
T  9391739 gaagaagaagaaagtaaataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaatta 9391640  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||  ||||| |||||||||||||||||| |||||||    
T  9391639 tcaaaattgtaccaaattgaataaaagaaataagtgaagggac 9391597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 44417677 - 44417535
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||| |||||||||||| |||||||| ||||||||||| | ||        |||||||||||||||    
T  44417677 gaagaagaagaaagtaaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaatta 44417578  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||| |||| ||||||||||||||||    
T  44417577 tcaaaattggaccaaattgaagaaaataaataagttaagggac 44417535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 530 - 673
Target Start/End: Complemental strand, 19217848 - 19217705
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || || |||||||||||||||||  |||||||| ||||||||||||  ||        |||| |||||||||    
T  19217848 ggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaatt 19217749  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||    
T  19217748 atcaaaattgtaccaaattgaataaaagaaataagttaatggac 19217705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 705 - 796
Target Start/End: Original strand, 13748072 - 13748159
Alignment:
Q  705 tgttcttcgtccccaactacatatataatctccaaatcgttctcctgttcaaatcagcagccacacctcaacaattcaaatacttctttaca 796  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||| |   |||||||||||||||||||||||||||||||||||    
T  13748072 tgttcttcgtcccaaactacatatataatctccaaatcgctct-ctgttcaagt---cagccacacctcaacaattcaaatacttctttaca 13748159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 44420421 - 44420562
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||| ||| |||||||||||||||||||||   |        |||| ||||||||||    
T  44420421 gaagaagaagaaagtaaataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaatta 44420519  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| | ||| ||||||||||||||||||||||||||    
T  44420520 tcaaaattggactaaattgaataaaagaaataagttaagggac 44420562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 48793414 - 48793556
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||| | || || |||||||||||||||||| ||| ||||| |||||||||||  ||        ||| |||||||||||    
T  48793414 gaagaagaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaatta 48793513  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  |||| ||||||||||||||||||||||||||    
T  48793514 tcaaaattggatcaaattgaataaaagaaataagttaagggac 48793556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 531 - 691
Target Start/End: Original strand, 43114985 - 43115144
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| | |||||||| ||||||||||||| |||||| |  |||||||||||  ||        | |||||||||||||    
T  43114985 gaagaagaagaaagtaaataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttcttttttaagggattaaaatta 43115084  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||  |||| ||||||||||||||||||||| |||||  || ||||||||||||    
T  43115085 tcaaaattggatcaaattgaataaaagaaataagttaa-ggaccatcacatcaattaagcc 43115144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 530 - 673
Target Start/End: Original strand, 29187927 - 29188070
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || || |||| ||||||||||||| ||||||||  | |||||||||  ||        ||||||||||||||    
T  29187927 ggaagaagaagaaagtaaataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaatt 29188026  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| | ||| ||||||||| |||||| |||||||||    
T  29188027 atcaaaattggactaaattgaataaaataaataaattaagggac 29188070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 29186880 - 29186742
Alignment:
Q  535 aagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaa 634  Q
    |||| |||| || ||||||||| || || |||||||||||||||||| |||||||| |||||||| |||  ||        | |||||||||||||||||    
T  29186880 aagaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaa 29186781  T
Q  635 aattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||  ||||| ||||||||| ||||||||||||||||    
T  29186780 aattgaaccaaattgaataaaataaataagttaagggac 29186742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 541 - 673
Target Start/End: Complemental strand, 7011844 - 7011711
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnn-aggggattaaaattatcaaaattg 639  Q
    |||||| ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||  ||         |  |||||||||||||||||||||    
T  7011844 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7011745  T
Q  640 gcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||| ||||||||||||||||| ||||||||    
T  7011744 gaccaaattgaataaaagaaataagctaagggac 7011711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 541 - 673
Target Start/End: Complemental strand, 7027202 - 7027069
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnn-aggggattaaaattatcaaaattg 639  Q
    |||||| ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||  ||         |  |||||||||||||||||||||    
T  7027202 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7027103  T
Q  640 gcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||| ||||||||||||||||| ||||||||    
T  7027102 gaccaaattgaataaaagaaataagctaagggac 7027069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 541 - 673
Target Start/End: Original strand, 27072562 - 27072694
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattgg 640  Q
    |||||| ||||||||| || || ||||| |||||||||||| ||||||||  |||||||||||   |        || |||||||||||||||||||| |    
T  27072562 aaagtaaataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27072661  T
Q  641 cccaaaatgaataaaagaaataagttaagggac 673  Q
     ||||| ||||||||||||||||||||||||||    
T  27072662 accaaattgaataaaagaaataagttaagggac 27072694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 541 - 673
Target Start/End: Complemental strand, 27205751 - 27205619
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattgg 640  Q
    |||||| ||||||||| || || ||||| |||||||||||| ||||||||  |||||||||||   |        || |||||||||||||||||||| |    
T  27205751 aaagtaaataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27205652  T
Q  641 cccaaaatgaataaaagaaataagttaagggac 673  Q
     ||||| ||||||||||||||||||||||||||    
T  27205651 accaaattgaataaaagaaataagttaagggac 27205619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 548 - 668
Target Start/End: Complemental strand, 44746929 - 44746809
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    ||||||||| || |||| |||||||||||||| | |||||||| ||||||||||||  ||        | ||||||||||||||||||||| | |||||     
T  44746929 ataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaaat 44746830  T
Q  648 tgaataaaagaaataagttaa 668  Q
    |||||||||||||||||||||    
T  44746829 tgaataaaagaaataagttaa 44746809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 550 - 673
Target Start/End: Complemental strand, 3537627 - 3537504
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| ||||| ||||| |||||||||| | |||||||||||||||||||||   |        |||||||||||||||| |||||| | | ||| ||    
T  3537627 aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattagactaaattg 3537528  T
Q  650 aataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||    
T  3537527 aataaaagaaataagttaagggac 3537504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 672
Target Start/End: Original strand, 37237083 - 37237264
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaa---gaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||| |||||||||||| | |||||||| | ||||   || || ||||||| ||||||||| || || | |||||||||||||||| |||||    
T  37237083 ttatgaagatgatgaaggatgaatgaagatgaagatgatggaagatgatgaagaaagtaaataaattaggtgttggtcatacactataaaatctgataga 37237182  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaaggga 672  Q
    ||| ||||||||||||| ||        || ||||| |||||||||||||||| ||||| | ||||||  |||||||||||||||    
T  37237183 cctccgtaatccaacgatctctttttttagaggatt-aaattatcaaaattggaccaaatttaataaa--aaataagttaaggga 37237264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 9391568 - 9391519
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9391568 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 9391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 13597363 - 13597222
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| | |||||||||||  |        || ||||||||||||    
T  13597363 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaatta 13597264  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||| |  |||| | ||||||||||||||||| ||||||    
T  13597263 tcaaaatt-gatcaaatttaataaaagaaataagttcagggac 13597222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 19217676 - 19217627
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19217676 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 19217627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 43962638 - 43962687
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43962638 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 43962687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 44417506 - 44417457
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44417506 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 44417457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 48792492 - 48792443
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48792492 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 48792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 48792659 - 48792521
Alignment:
Q  535 aagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaa 634  Q
    |||| ||||||| ||||||| | || || |||||||||||||||||| ||| ||| | |||||||||||  ||        ||| |||||||||||||||    
T  48792659 aagaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatcaa 48792560  T
Q  635 aattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||| |  |||| ||||||||||||||||||||||||||    
T  48792559 aattagatcaaattgaataaaagaaataagttaagggac 48792521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 48793585 - 48793634
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48793585 ccaaaatgaataaaagaaataagttaagggaccggcaaatcaattaagcc 48793634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 642 - 690
Target Start/End: Original strand, 7057398 - 7057446
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7057398 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 43006753 - 43006678
Alignment:
Q  222 atgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaatttt 297  Q
    |||||| ||||||| ||||||| ||||| |||| |||||||||| ||||||||||| ||||| |||||||||||||    
T  43006753 atgatggtggtggtgtttattccagatttaaggatttgattatatgattttttatgaagttgaaatgatgaatttt 43006678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 673
Target Start/End: Complemental strand, 44230617 - 44230505
Alignment:
Q  561 tgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaa 660  Q
    |||||||||||| |||||||| ||||||||  |||||||||||  ||        |||||||| ||||||| |||||||| ||||| |||||||||||||    
T  44230617 tgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaataaaagaaa 44230518  T
Q  661 taagttaagggac 673  Q
    |||||||| ||||    
T  44230517 taagttaaaggac 44230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 3537475 - 3537429
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  3537475 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 621 - 687
Target Start/End: Original strand, 13599246 - 13599312
Alignment:
Q  621 attaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaatta 687  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| |||  |||||||||||||    
T  13599246 attaaaattatcaaaattggagcaaattgaataaaagaaataagttaaaggattggcagatcaatta 13599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 3538632 - 3538681
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  3538632 ccaaattgaataaaagaaataagttaagggaccggcggatcaattaagcc 3538681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 29186713 - 29186664
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  29186713 ccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 29186664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 42611484 - 42611435
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  42611484 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 42611435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 43113723 - 43113674
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  43113723 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 43113674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 43960994 - 43960945
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  43960994 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 43960945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 44231911 - 44231960
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  44231911 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 44231960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 45688916 - 45688867
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  45688916 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 45688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 19008980 - 19008931
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  19008980 ccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaagcc 19008931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 26006812 - 26006861
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  26006812 ccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcc 26006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 27071069 - 27071020
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  27071069 ccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 27207244 - 27207293
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  27207244 ccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27207293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 29188099 - 29188148
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  29188099 ccaaattgaataaaagaaataagttaaaggaccggcagatcatttaagcc 29188148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 32519818 - 32519867
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  32519818 ccaaattgaataaaagaaataaattaagggaccggcagatcaatttagcc 32519867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 7011681 - 7011633
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  7011681 caaattgaataaaagaaataagttaagggactgacagatcaattaagcc 7011633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 7027039 - 7026991
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||    
T  7027039 caaattgaataaaagaaataagttaagggactgacagatcaattaagcc 7026991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 13599158 - 13599226
Alignment:
Q  534 gaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaac 602  Q
    ||||| ||||||| ||||||||| || |  |||||||||||||||||| |||||||| |||||||||||    
T  13599158 gaagaagaaagtaaataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaac 13599226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 691
Target Start/End: Complemental strand, 13749135 - 13749063
Alignment:
Q  619 ggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||    |||| | |||| ||||||||||||| ||||||| |||||||||||||||    
T  13749135 ggattaaaattatcaaaattaaatcaaattaaatataagaaataagttatgggaccgccagatcaattaagcc 13749063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 27072724 - 27072772
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  27072724 caaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 27072772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 27205589 - 27205541
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  27205589 caaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 27205541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 812 - 884
Target Start/End: Original strand, 13748182 - 13748253
Alignment:
Q  812 tgcaacaaattgattctttgcactttgaaaaggtnnnnnnntgaaatctggattctttgaattttcccaatag 884  Q
    |||||||||||||||||| |||||||||||||||       ||||| | ||||||||||||||||||||||||    
T  13748182 tgcaacaaattgattctt-gcactttgaaaaggtaaaaaaatgaaaaccggattctttgaattttcccaatag 13748253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 18788635 - 18788678
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  18788635 tgaataaaagaaataaattaagggaccggcatatcaattaagcc 18788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 32518615 - 32518560
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||    
T  32518615 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacg 32518560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 672
Target Start/End: Original strand, 32519734 - 32519788
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaaggga 672  Q
    |||||||||||||| |||||||  ||||| |||||||||||||||| ||||||||    
T  32519734 gggattaaaattattaaaattgaaccaaattgaataaaagaaataatttaaggga 32519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 673
Target Start/End: Complemental strand, 37235941 - 37235891
Alignment:
Q  623 taaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||||||||||||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggac 37235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 19016766 - 19016815
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||| ||||||||||| ||||||||||| |||||||||||||||    
T  19016766 ccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaagcc 19016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 37235854 - 37235813
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  37235854 aataaaagaaataagttaagggaccggcaggccaattaagcc 37235813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 37237302 - 37237343
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  37237302 aataaaagaaataaattaagggacgggcagatcaattaagcc 37237343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 44420591 - 44420640
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||| ||||| ||||||||||||    
T  44420591 ccaaattgaataaaagaaataagttaaaggatcggcatatcaattaagcc 44420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 22745465 - 22745382
Alignment:
Q  214 tgaggtagatgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaatttt 297  Q
    |||| ||||||||||||||||| ||||||| | ||  |||| ||||||||||   ||||| ||| ||||| |||||||||||||    
T  22745465 tgagttagatgatgatggtggtgtttattccatatctaaggatttgattatatcgtttttaatgaagttgaaatgatgaatttt 22745382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 44230470 - 44230427
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||    
T  44230470 tgaataaaagaaataatctaagggatcggcagatcaattaagcc 44230427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 12630699 - 12630641
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa-gttaagggac 673  Q
    ||||||||||||||||||||||| | ||||| ||||||||| ||| || ||||||||||    
T  12630699 aggggattaaaattatcaaaattagaccaaattgaataaaaaaaaaaaggttaagggac 12630641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 658 - 688
Target Start/End: Original strand, 45400095 - 45400125
Alignment:
Q  658 aaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||||||||    
T  45400095 aaataagttaagggaccggcagatcaattaa 45400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 8661715 - 8661678
Alignment:
Q  654 aaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  8661715 aaagaattaagttaagggaccggctgatcaattaagcc 8661678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 9392892 - 9392933
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||    
T  9392892 aataaaagaaataagttaaaggaacggaagatcaattaagcc 9392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 13597193 - 13597144
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||| ||||| ||| |||||| |||||||||||    
T  13597193 ccaaattgaataaaagaaatacgttaaaggatcggcagttcaattaagcc 13597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 690
Target Start/End: Complemental strand, 18787186 - 18787149
Alignment:
Q  653 aaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  18787186 aaaagaaataaattaagggaccgacagatcaattaagc 18787149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 24653748 - 24653789
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  24653748 aataaaagaattaagttaagggaccggaggatcaattaagcc 24653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 688
Target Start/End: Complemental strand, 44746774 - 44746729
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||| ||||||||| |||||||||||| ||||| ||||||||||||    
T  44746774 caaattgaataaaaaaaataagttaagagaccgacagatcaattaa 44746729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 4e-99; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 3 - 258
Target Start/End: Original strand, 56234531 - 56234786
Alignment:
Q  3 aggttgagatgtaaatcatataccgtgatgctgtgcgttttggaaataaatgaagttgttgatttttgttgggatttggctgggaatatgaagaaactaa 102  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||    
T  56234531 aggttgagttgtaaatcatataccgtgatgttgtgcattttggaaataaatgaagttgttgaatttttttgggatttggctgagaatatgaagaaaataa 56234630  T
Q  103 agggttaggtgttttgaactggagaagatgcaacttctggagtagccccgcataatttctcatataagttgttggctgttggcattcactctacaaaatt 202  Q
    |||||| ||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  56234631 agggtttgggtgtttgaagtggagaagatgcaacttctggagtagccccgcataatttctcatataagttgttggccgttggcattcactctacaaaact 56234730  T
Q  203 aaaggataaattgaggtagatgatgatggtggtttttattctagattcaagggttt 258  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  56234731 aaaggataaattgagttagatgatggtggcggtgtttattctagattcaagggttt 56234786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 492 - 673
Target Start/End: Complemental strand, 22622127 - 22621945
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    |||||||||||| |||||||||||||| |||||||| | ||||||||| ||||||| ||||||| | ||  | |||||||||||||||||| ||||||||    
T  22622127 ttatgaagatgatgaaggatgaatgtagatgaagatgagggaagaagaagaaagtaaataaattcggtgtcggtgatacactataaaatctgatagacct 22622028  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
     ||||||||||||  ||        ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  22622027 ccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagtaaagggac 22621945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 7261441 - 7261583
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||||||||||||| |  ||        |||||||||||||||    
T  7261441 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaatta 7261540  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  7261541 tcaaaattggaccaaattgaataaaagaaataagttaagggac 7261583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 38032318 - 38032460
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||  ||        |||||||||||||||    
T  38032318 gaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatta 38032417  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| |||||||||||    
T  38032418 tcaaaattggaccaaattgaataaaagaaatcagttaagggac 38032460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 509 - 673
Target Start/End: Original strand, 22623018 - 22623183
Alignment:
Q  509 gatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacct 607  Q
    |||||||||| |||||||| | ||||||||| || |||| ||||||||| || || ||||||| |||||||||| |||||||| ||||||||||||  ||    
T  22623018 gatgaatgtagatgaagatgagggaagaagaagagagtaaataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtct 22623117  T
Q  608 gnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
            ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  22623118 ctttttgtaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagtaaagggac 22623183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 530 - 673
Target Start/End: Complemental strand, 38031389 - 38031246
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||| |||||| |||||  ||        | ||||||||||||    
T  38031389 ggaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaatt 38031290  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  38031289 atcaaaattggaccaaattgaataaaagaaatcagttaagggac 38031246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 492 - 673
Target Start/End: Complemental strand, 17356624 - 17356439
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||| | |||||||||||| | ||||||||  ||    ||||||| ||||||| || || ||| || || |||||||||||||||||| |||||    
T  17356624 ttatgaagataatgaaggatgaatgaagatgaagatgagggaagaagaagaagaaagtaaatgaactaggtgttggtgatacactataaaatctgataga 17356525  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||| ||||||||||||  ||        |||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  17356524 cctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaacaaattgaataaaagaaataagttaagggac 17356439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 34095557 - 34095699
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| ||  | |||||||||||||||||| |||||||| |||||| |||||  ||        |||||||||||||||    
T  34095557 gaagaagaagaaagtaaataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaatta 34095656  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||| |||||||||||||||||||||    
T  34095657 tcaaaattggaccaaattgaacaaaagaaataagttaagggac 34095699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 673
Target Start/End: Complemental strand, 10803106 - 10802967
Alignment:
Q  534 gaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatca 633  Q
    ||||| ||||||| ||||||| | || || ||||||| |||||||||| ||| |||| ||||||||||||  ||        |||| |||||||||||||    
T  10803106 gaagaagaaagtaaataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatca 10803007  T
Q  634 aaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  10803006 aaattggaccaaattgaataaaagaaataagttaagggac 10802967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 670
Target Start/End: Original strand, 10804093 - 10804232
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||| || ||||||| |||||||||  | |||||||||||| |||||||| |||||||| ||||||||||||  ||        || ||||||||||||    
T  10804093 gaagatgaagaaagtaaataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaatta 10804192  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    |||||||||  ||||| |||||||||||||||||||||||    
T  10804193 tcaaaattgaaccaaattgaataaaagaaataagttaagg 10804232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 8815255 - 8815397
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||| | || || |||||||||||||||||| |||||||| ||||||||||||   |        || ||||||||||||    
T  8815255 gaagaagaagaaagtaaataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaatta 8815354  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||  |||||| |||||||||||||||||||    
T  8815355 tcaaaattggaccaatttgaatagaagaaataagttaagggac 8815397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 56234781 - 56234840
Alignment:
Q  368 gggtttttgagagaagaagacatgaatattggggttttaaaagcataatttgatgaagat 427  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  56234781 gggtttttgagagtagaagacatgaagattggggttttaaaagcataatttgatgaagat 56234840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Complemental strand, 48499565 - 48499442
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || ||||||||  |||||||| ||||||||  |||||||||||| ||        ||||||||||||||||||||||||| ||||| ||    
T  48499565 aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaaattg 48499466  T
Q  650 aataaaagaaataagttaagggac 673  Q
    ||||||| ||||||||||||||||    
T  48499465 aataaaataaataagttaagggac 48499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 56233859 - 56233802
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  56233859 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 56233802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 303 - 387
Target Start/End: Original strand, 7989141 - 7989225
Alignment:
Q  303 aataacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaaga 387  Q
    ||||||||||||| ||||||| |||| ||| ||||||||||||||||||    || |||||||||||||||||||||||||||||    
T  7989141 aataacatgatgaaggaagaagcaaagatcaaagatgaaaattcataaacgggcaccgaattaatgggtttttgagagaagaaga 7989225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 531 - 640
Target Start/End: Original strand, 35927014 - 35927123
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||||||||||||  ||||||||||||||||||||| ||        ||| |||||||||||    
T  35927014 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaatta 35927113  T
Q  631 tcaaaattgg 640  Q
    ||||||||||    
T  35927114 tcaaaattgg 35927123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 23757868 - 23758011
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||| ||||||||| |||||||| |||||| |||||  ||         | ||||||||||||    
T  23757868 gaagaagaagaaagtaaataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaatta 23757967  T
Q  631 tcaaaattggcccaaaatg-aataaaagaaataagttaagggac 673  Q
    ||||||||||  ||||||  ||||||||||||||||||||||||    
T  23757968 tcaaaattggatcaaaatttaataaaagaaataagttaagggac 23758011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 10804264 - 10804313
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10804264 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 10804313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 48501222 - 48501363
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || ||||||||||| ||||||||| | |||||| ||||||| ||||  ||        |||||||||||| ||    
T  48501222 gaagaagaagaaagtaaataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaa-ta 48501320  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | |||||| | ||||| ||||||||||||||||||||| ||||    
T  48501321 ttaaaattagaccaaattgaataaaagaaataagttaaaggac 48501363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 548 - 673
Target Start/End: Complemental strand, 8814337 - 8814213
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    ||||||||| || || || ||||||||||||||| |||||||| |||||||||||   ||        |||| |||||||||||||||||| | |||||     
T  8814337 ataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtct-attttttagggtattaaaattatcaaaattcgaccaaat 8814239  T
Q  648 tgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||||    
T  8814238 tgaataaaagaaataagttaagggac 8814213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 642 - 688
Target Start/End: Original strand, 17357932 - 17357978
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17357932 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 10802938 - 10802889
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  10802938 ccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 10802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 18091800 - 18091658
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||  ||||| |||||  ||        | | |||||||||||    
T  18091800 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaatta 18091701  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| | ||| ||||||||| | ||||||||| ||||    
T  18091700 tcaaaattggactaaattgaataaaatagataagttaatggac 18091658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 22621916 - 22621867
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  22621916 ccaaattgaataaaagaaataagttaagggactggcagatcaattaagcc 22621867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 34121348 - 34121299
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  34121348 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 34121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 34122871 - 34122920
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  34122871 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 34122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 35193179 - 35193236
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  35193179 aggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggac 35193236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 604
Target Start/End: Original strand, 36074692 - 36074765
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacga 604  Q
    |||||||| |||| || ||||||||| || || |||||||||||||||| | ||||||||||||||||||||||    
T  36074692 gaagaagaggaaattaaataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaacga 36074765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 38031217 - 38031168
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  38031217 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 38031168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 38032489 - 38032538
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  38032489 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 38032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 48463053 - 48463102
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  48463053 ccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 48463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 7261613 - 7261661
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  7261613 caaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 7261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 17356409 - 17356361
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  17356409 caaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 17356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 492 - 671
Target Start/End: Original strand, 56234875 - 56235058
Alignment:
Q  492 ttatgaagatga-agaaggatgaatgtatatgaagat--acg--gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatag 586  Q
    |||||||||||| ||||||||||||||| || |||||  | |  ||| |||| ||||||| ||||||||| || || ||||||| |||||||||| ||||    
T  56234875 ttatgaagatgacagaaggatgaatgtagataaagatgaaagaagaataagaagaaagtaaataaattaggtgttggtgatacattataaaatctgatag 56234974  T
Q  587 accttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaaggg 671  Q
    ||||||||||| ||  |  |||       || ||||||||| |||||||||| | || || ||||||||||||||||||||||||    
T  56234975 accttcgtaattcattggtctg-ttttttagaggattaaaagtatcaaaattagaccgaattgaataaaagaaataagttaaggg 56235058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 652 - 691
Target Start/End: Original strand, 22624389 - 22624428
Alignment:
Q  652 taaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22624389 taaaagaaataagttaagggaccggcagatcaattaagcc 22624428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 531 - 602
Target Start/End: Complemental strand, 35925911 - 35925840
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaac 602  Q
    |||||||| ||||||| ||||||||| || ||| ||||||||||||||||| ||||| || |||||||||||    
T  35925911 gaagaagaagaaagtaaataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaac 35925840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 8815426 - 8815475
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  8815426 ccaaattgaataaaagaaataagttaacggaccggcaaatcaattaagcc 8815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 17357850 - 17357903
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||||||||  || | ||||||||||||||||||||||||||    
T  17357850 gattaaaattatcaaaattggatcatattgaataaaagaaataagttaagggac 17357903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 18091621 - 18091580
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  18091621 aataaaagaaataagttaagggatcggcagatcaattaagcc 18091580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 35191866 - 35191817
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  35191866 ccaaattgaataaaagaaataagttaagggaccggcgaatcaattaagcc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 35191952 - 35191900
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    ||||||||||||||||||||||||  | ||| |||||||||||||||||||||    
T  35191952 aggggattaaaattatcaaaattgaactaaattgaataaaagaaataagttaa 35191900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 1273167 - 1273242
Alignment:
Q  222 atgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaatttt 297  Q
    |||||| ||||||| ||||||| ||||| || | |||||||||| ||||||||||  ||||| |||||||||||||    
T  1273167 atgatggtggtggtgtttattccagatttaaagatttgattatatgattttttataaagttgaaatgatgaatttt 1273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 530 - 670
Target Start/End: Original strand, 5433304 - 5433444
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| |||| || ||||||||| || |  ||||||| |||||||||| |||||||| |||||| ||||   ||        |||| |||||||||    
T  5433304 ggaagaagaagaaattaaataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaatttttagggtattaaaatt 5433403  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    |||||||||||   ||| ||||||||| |||||||||||||    
T  5433404 atcaaaattggagtaaattgaataaaataaataagttaagg 5433444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 8814178 - 8814135
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  8814178 tgaataaaagaaataagttaagggaccgatagatcaattaagcc 8814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 48081396 - 48081443
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  48081396 ccaaattgaataaaaggaataagttaagggaccggcaaatcaattaag 48081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 48080311 - 48080270
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  48080311 aataaaagaaataagttaagtgaccgacagatcaattaagcc 48080270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 56233773 - 56233724
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||  ||||| ||||||||    
T  56233773 ccaaattgaataaaagaaataagttaagggaccgatagatctattaagcc 56233724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 56235090 - 56235138
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||| ||||||||| | |||||||||||||||    
T  56235090 caaattgaataaaagaaataaattaagggactgacagatcaattaagcc 56235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 35193265 - 35193312
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||||||||| ||||||||| ||||| |||||||||    
T  35193265 ccaaattgaataaaagaaataaattaagggactggcaggtcaattaag 35193312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 55953190 - 55953107
Alignment:
Q  214 tgaggtagatgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaatttt 297  Q
    |||| ||||||||| ||||||| ||||||| ||||| || | |||||||||| | ||||| ||  ||||| |||||||||||||    
T  55953190 tgagttagatgatggtggtggtgtttattccagatttaatgatttgattatatggtttttgattaagttgaaatgatgaatttt 55953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 23758046 - 23758088
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||||||||||||||| |||| | |||||||||||||||||||    
T  23758046 tgaataaaagaaataaattaaagaaccggcagatcaattaagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 642 - 688
Target Start/End: Original strand, 48081659 - 48081705
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||||    
T  48081659 ccaaattgaataaaaggaataagttaagggaccgacacatcaattaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 48499413 - 48499367
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||    
T  48499413 ccaaattgaataaaagaaataagttaaggtggcggcagatcaattaa 48499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 5574241 - 5574200
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  5574241 aataaaagaattaagttaagggaccggaggatcaattaagcc 5574200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 1e-40; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 34996619 - 34996801
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    ||||||||||||  ||||| ||| ||| |||||||| | ||||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||    
T  34996619 ttatgaagatgataaaggaagaaggtagatgaagatgagggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacct 34996718  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||  |||       ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34996719 tcgtaatccaacggtctgtttttttaggagattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 34996801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 492 - 672
Target Start/End: Original strand, 3000654 - 3000832
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    ||||||||||||  ||||||||||||| |||||||| | |||||||||   ||||| ||||||||| || |  |||||||||||||||||| ||||||||    
T  3000654 ttatgaagatgataaaggatgaatgtagatgaagatgatggaagaaga---aagtaaataaattaggtgttagtgatacactataaaatctgatagacct 3000750  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaaggga 672  Q
    |||||||||||||| |||       ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  3000751 tcgtaatccaacgatctgtgtttttaggggattaaaattatcaaaattggactaaattgaataaaagaaataagttaaggga 3000832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 32348894 - 32349077
Alignment:
Q  492 ttatgaagatgaa-gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacc 589  Q
    ||||||||||||  |||||||||||| | |||||||| | ||||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||    
T  32348894 ttatgaagatgattgaaggatgaatgaagatgaagatgatggaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacc 32348993  T
Q  590 ttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||||||||||  ||        ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  32348994 tccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaatcagttaagggac 32349077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 492 - 668
Target Start/End: Complemental strand, 34995614 - 34995434
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||| ||||||| |||||||||||| | ||||||||  |    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||    
T  34995614 ttattaagatgatgaaggatgaatgcagatgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgataga 34995515  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    ||||||||||| ||||  |||       |||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  34995514 ccttcgtaatctaacggtctgtttttttaggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaa 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 505 - 669
Target Start/End: Complemental strand, 32712602 - 32712437
Alignment:
Q  505 gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    |||||||||||||| |||||||| | ||||||||| ||||||| |||| |||| || || || ||||||||||||| | |||||||| ||||||||||||    
T  32712602 gaaggatgaatgtagatgaagatgagggaagaagaagaaagtaaataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacg 32712503  T
Q  604 acctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
      ||        ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  32712502 gtctctttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaag 32712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 32348028 - 32347886
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||  ||||||||||||  ||        |||||||||||||||    
T  32348028 gaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaatta 32347929  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| | |||||||||    
T  32347928 tcaaaattggaccaaattgaataaaagaaatcacttaagggac 32347886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 32713781 - 32713923
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  |         |||||||||||||||    
T  32713781 gaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaatta 32713880  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  32713881 tcaaaattggaccaaattgaataaaagaaataagttaagggac 32713923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 11801240 - 11801382
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||| | ||||||| ||||||||| || | ||||||||||||||||| | |||||||| ||||||||||||  ||        |||||||||||||||    
T  11801240 gaagaataagaaagtaaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaatta 11801339  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| |||||||||||    
T  11801340 tcaaaattggaccaaattgaataaaagaaatcagttaagggac 11801382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 306 - 420
Target Start/End: Complemental strand, 29466396 - 29466282
Alignment:
Q  306 aacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaagacatgaatattggggtttt 405  Q
    |||||||||| ||||||| |||| |||||||||| |||||||||||    ||||||| |||||| |||||||||||| ||| |||||| |||||| ||||    
T  29466396 aacatgatgaaggaagaagcaaagatccaagatggaaattcataaatgggcatcgaaataatggttttttgagagaataaggcatgaagattgggttttt 29466297  T
Q  406 aaaagcataatttga 420  Q
    |||| ||||||||||    
T  29466296 aaaaacataatttga 29466282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 18573104 - 18572963
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||  || || ||||||||| |||||| | |||||||| ||||||||||| |           |||||||||||||||    
T  18573104 gaagaagaagaaagtaaataaattatgtgttggtgatacactgtaaaatttgatagacctccgtaatccaac-agtgtcttttttaggggattaaaatta 18573006  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  18573005 tcaaaattggcccaatttgaataaaagaaataagttaagggac 18572963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 29477808 - 29477759
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29477808 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 29477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 11801411 - 11801460
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  11801411 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 11801460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 18572934 - 18572885
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  18572934 ccaaattgaataaaagaaataagttaacggaccggcagatcaattaagcc 18572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 18574362 - 18574411
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  18574362 ccaaattgaataaaagaaataagtcaagggaccggcagatcaattaagcc 18574411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 32349106 - 32349155
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  32349106 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 32349155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 21094615 - 21094553
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    |||||| ||||||||| || || ||||||||||||||||||| ||||||| ||||||||||||    
T  21094615 aaagtaaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacg 21094553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 32712404 - 32712358
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  32712404 ccaaactgaataaaagaaataagttaagggaccgacagatcaattaa 32712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 3000862 - 3000911
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||||    
T  3000862 ccaaattgaataaaagaaataagttaagggaccgacaaatcaattaagcc 3000911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 19383056 - 19383124
Alignment:
Q  534 gaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||| |||||||||||||    
T  19383056 gaagaagaaagtaaataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacg 19383124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 29479177 - 29479234
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||| ||||||| |||||||| ||||| ||||||||||||||||||||| ||||    
T  29479177 aggggattgaaattattaaaattggaccaaattgaataaaagaaataagttaaaggac 29479234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 34995401 - 34995352
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  34995401 ccaaattgaataaaagaaataagttaaaggaccgacagatcaattaagcc 34995352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 688
Target Start/End: Original strand, 19383222 - 19383262
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  19383222 tgaataaaagaaataagttaagggaccggcggatcaattaa 19383262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 27719938 - 27719883
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||    
T  27719938 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacg 27719883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 29479269 - 29479312
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||| |||||||| ||||||||||||||||||    
T  29479269 tgaataaaagaaataatttaagggatcggcagatcaattaagcc 29479312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 602
Target Start/End: Original strand, 21095287 - 21095348
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaac 602  Q
    |||||| ||||||||| || || ||||||||||||||||||  ||||||| |||||||||||    
T  21095287 aaagtaaataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaac 21095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 32347857 - 32347808
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  32347857 ccaaattgaataaaagaaataaattaaggaaccagcagatcaattaagcc 32347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 32713952 - 32714001
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||    
T  32713952 ccaaactgaataaaagaaataagttacaggaccagcagatcaattaagcc 32714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 8411501 - 8411418
Alignment:
Q  214 tgaggtagatgatgatggtggtttttattctagattcaagggtttgattatacgattttttatggagttgtaatgatgaatttt 297  Q
    |||| ||||||||||||||||| ||||||| | ||  |||| ||||||||||   ||||| ||| ||||| |||||||||||||    
T  8411501 tgagttagatgatgatggtggtgtttattccatatctaaggatttgattatatcgtttttaatgaagttgaaatgatgaatttt 8411418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 689
Target Start/End: Original strand, 34996836 - 34996877
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  34996836 tgaataaaagaaataagttcagggaccgacaaatcaattaag 34996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 492 - 691
Target Start/End: Original strand, 52761453 - 52761654
Alignment:
Q  492 ttatgaagatgaa-gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacc 589  Q
    ||||||||||||  |||||||||||| | |||||||| | ||||||||  ||||||| ||||||||| || || |||||||||||||||||| |||||||    
T  52761453 ttatgaagatgattgaaggatgaatgaagatgaagatgatggaagaaggagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacc 52761552  T
Q  590 ttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    | || |||||||||  ||        ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  52761553 tccgcaatccaacggtctcttttttcaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaaggaaccggcatatcaattaag 52761652  T
Q  690 cc 691  Q
    ||    
T  52761653 cc 52761654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 530 - 673
Target Start/End: Complemental strand, 7110447 - 7110304
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| |||||||||  | ||||||||||||||||||||| |||||||| || |||||||||| ||        ||||||||||||||    
T  7110447 ggaagaagaagaaagtaaataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaatt 7110348  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  7110347 atcaaaattggaccaaattgaataaaagaaatcagttaagggac 7110304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 7111373 - 7111515
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||  ||        |||||||||||||||    
T  7111373 gaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatta 7111472  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| |||||| ||||    
T  7111473 tcaaaattggaccaaattgaataaaagaaatcagttaatggac 7111515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 45229461 - 45229643
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    |||||||||||| |||||||||||||| |||||||| | ||||||| | |||| || ||||||||| || || |||| || |||||||||| ||||||||    
T  45229461 ttatgaagatgatgaaggatgaatgtagatgaagatgaaggaagaacaagaaactaaataaattaggtgttggtgatccattataaaatctgatagacct 45229560  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
     ||||||||||| | ||        |  ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  45229561 ccgtaatccaacaatctttttttttataggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggac 45229643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 530 - 673
Target Start/End: Complemental strand, 51693368 - 51693225
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || || |||||||||||||||||  |||||||| ||||||||||||  ||        |||| |||||||||    
T  51693368 ggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaatt 51693269  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||    
T  51693268 atcaaaattgaaccaaattgaataaaagaaataagttaaaggac 51693225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 51468559 - 51468417
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||||||  |||||| ||||||| | || || |||||||||||||||||| |||||||| ||||||||| | | ||        |||||||||||||||    
T  51468559 gaagaagaaaaaagtaaataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatctttttttttaggggattaaaatta 51468460  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | |||||||| ||||| ||||||||||||||||||||||||||    
T  51468459 ttaaaattggaccaaattgaataaaagaaataagttaagggac 51468417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 306 - 420
Target Start/End: Original strand, 6242139 - 6242253
Alignment:
Q  306 aacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaagacatgaatattggggtttt 405  Q
    ||||||| || ||||||| |||| |||||||||| |||||||||||    ||||||| |||||| ||||||||||||||||||||||| |||| | ||||    
T  6242139 aacatgacgaaggaagaagcaaagatccaagatggaaattcataaatgggcatcgaaataatggttttttgagagaagaagacatgaagattgagttttt 6242238  T
Q  406 aaaagcataatttga 420  Q
    |||| ||||||||||    
T  6242239 aaaaacataatttga 6242253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 505 - 673
Target Start/End: Complemental strand, 17244425 - 17244253
Alignment:
Q  505 gaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatcca 600  Q
    |||||||||||||| ||||||||  ||    ||||||| ||||||| ||||||||| |   | ||||||| |||||||||| |||||||| |||||||||    
T  17244425 gaaggatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattaggtatcggtgatacattataaaatctgatagacctccgtaatcca 17244326  T
Q  601 acgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||  ||        ||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  17244325 acggtctctttttttaggagattaaaattatcaaaattggaccaaattgaatcaaagaaataagttaagggac 17244253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 52086841 - 52086705
Alignment:
Q  535 aagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaa 634  Q
    |||| ||||||| | ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||   |        |||||||||||||||| ||    
T  52086841 aagaagaaagtaaaaaaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacgg--tttttttttaggggattaaaattattaa 52086744  T
Q  635 aattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||| | ||| ||||||||||||||||||||||||||    
T  52086743 aattggactaaattgaataaaagaaataagttaagggac 52086705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 668
Target Start/End: Original strand, 5488782 - 5488902
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    ||||||||| || || |||||||||||||||| | |||||||| ||||||||||||  ||        | ||||||||||||||||||||||| |||||     
T  5488782 ataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaaat 5488881  T
Q  648 tgaataaaagaaataagttaa 668  Q
    |||||||||||||||||||||    
T  5488882 tgaataaaagaaataagttaa 5488902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Original strand, 50484913 - 50485036
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || ||||||||| |||||||| ||||||||  ||||||||| |  ||        ||||||||||||||||||||||||| ||||| ||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  650 aataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||    
T  50485013 aataaaagaaataagttaagggac 50485036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 51468799 - 51468941
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||| |||||||||||||| || |||||||||| |   |        |||||||||||||||    
T  51468799 gaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaatta 51468898  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | |||||||| ||||| |||||| |||||||||||| ||||||    
T  51468899 ttaaaattggaccaaattgaatagaagaaataagtttagggac 51468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 5488688 - 5488579
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||||||||||||| |||||||| ||||||||||||  ||        | |||||||||||||||||||||||  |||| ||||||||||||||||    
T  5488688 tgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattgaataaaagaaataa 5488589  T
Q  664 gttaagggac 673  Q
    ||||| ||||    
T  5488588 gttaaaggac 5488579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 495 - 603
Target Start/End: Complemental strand, 21203271 - 21203159
Alignment:
Q  495 tgaagatgaagaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    |||| |||| |||||||||||||| ||||||||  |    |||||| | ||||||| ||||||||| || ||||||||||||||||||||| ||||||||    
T  21203271 tgaaaatgatgaaggatgaatgtagatgaagatgagaaaagaagaataagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacct 21203172  T
Q  591 tcgtaatccaacg 603  Q
    | |||||||||||    
T  21203171 ttgtaatccaacg 21203159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 492 - 668
Target Start/End: Complemental strand, 45228539 - 45228358
Alignment:
Q  492 ttatgaagatgaa-gaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatag 586  Q
    ||||||||||||  |||||||||||||| ||||||||  ||    ||||||| ||||||| ||||||||   | |  |||||||||||||||| | ||||    
T  45228539 ttatgaagatgattgaaggatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattaagcgtttgtgatacactataaaatttgatag 45228440  T
Q  587 accttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    | || ||||||||||||  ||        |||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  45228439 atctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaa 45228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 38235048 - 38235189
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||| |||||||| |||||| ||||||||||||||   ||         ||||||||| |||    
T  38235048 gaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttt-tgggattaaactta 38235146  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | |||||||| ||||| | ||||||||||||||||||||||||    
T  38235147 ttaaaattggaccaaatttaataaaagaaataagttaagggac 38235189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 564 - 670
Target Start/End: Complemental strand, 40187789 - 40187683
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||| ||||||||| |||||||| ||||||||||||  ||        |||||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  40187789 tgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagtaaaagaaataa 40187690  T
Q  664 gttaagg 670  Q
    |||||||    
T  40187689 gttaagg 40187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 52086676 - 52086627
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52086676 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 52086627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 18819449 - 18819340
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||||||||||||| ||| |||| ||||||||||||   |        |||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  18819449 tgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaataaaagaaataa 18819350  T
Q  664 gttaagggac 673  Q
     |||||||||    
T  18819349 attaagggac 18819340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 642 - 690
Target Start/End: Complemental strand, 25181550 - 25181502
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25181550 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 25181502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 1823367 - 1823410
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1823367 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 18820825 - 18820874
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  18820825 ccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 18820874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 51468388 - 51468339
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  51468388 ccaaattgaataaaaaaaataagttaagggaccggcagatcaattaagcc 51468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 51693196 - 51693147
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  51693196 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 51693147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 52759583 - 52759441
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||  ||||| |||||  ||        | | |||||||||||    
T  52759583 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaatta 52759484  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| | ||| ||||||||| | ||||||||| ||||    
T  52759483 tcaaaattggactaaattgaataaaatagataagttaatggac 52759441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 7110267 - 7110226
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7110267 aataaaagaaataaattaagggaccggcagatcaattaagcc 7110226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 52759404 - 52759363
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  52759404 aataaaagaaataagttaagggatcggcagatcaattaagcc 52759363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 669
Target Start/End: Original strand, 1823227 - 1823331
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||||||||||||| |||||||||||||||||||||   |        ||  |||||||||||||||||||||  |||| ||||||||| ||||||    
T  1823227 tgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaataaaa-aaataa 1823325  T
Q  664 gttaag 669  Q
    ||||||    
T  1823326 gttaag 1823331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 5488942 - 5488985
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  5488942 tgaataaaagaaataagttaagggatcggcggatcaattaagcc 5488985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 45228737 - 45228698
Alignment:
Q  383 gaagacatgaatattggggttttaaaagcataatttgatg 422  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  45228737 gaagacatgaagattggggttttaaaagcataatttgatg 45228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 685
Target Start/End: Original strand, 50485065 - 50485108
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaat 685  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  50485065 ccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 642 - 688
Target Start/End: Original strand, 45229672 - 45229718
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  45229672 ccaaattgaataaaagaaataaattaagggaccgacagatcaattaa 45229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 17244224 - 17244175
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||| |||||||| | |||||||||    
T  17244224 ccaaattgaataaaagaaataagttaaggaaccggcaggttaattaagcc 17244175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 17245733 - 17245782
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||| |||||| |||||||||||||    
T  17245733 ccaaattgaataaaagaaataaattaaggaaccggcggatcaattaagcc 17245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 40187652 - 40187603
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||| || |||||| |||||||||||||||    
T  40187652 ccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaagcc 40187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 687
Target Start/End: Complemental strand, 47533006 - 47532961
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaatta 687  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||    
T  47533006 ccaaattgaataaaaaaaataacttaagggaccggcagatcaatta 47532961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 51468970 - 51469019
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||| |||||||||||||||| | |||||||||||||||    
T  51468970 ccaaattgaataaaaaaaataagttaagggactgacagatcaattaagcc 51469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 18819310 - 18819262
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||||||    
T  18819310 caaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcc 18819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 50483645 - 50483593
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    |||||| ||||||||| |||||||| ||||| |||||||||||||||| ||||    
T  50483645 aggggagtaaaattataaaaattggaccaaattgaataaaagaaataaattaa 50483593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 1822112 - 1822057
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||||||| || | ||||||||||||||||||  |||||||||||||| ||||||    
T  1822112 ataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacg 1822057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 5488549 - 5488502
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  5488549 caaattgaataaaagaaataaattaagggaccaacagatcaattaagc 5488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 619 - 673
Target Start/End: Original strand, 17245651 - 17245704
Alignment:
Q  619 ggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||||||||| ||||| | ||||||| ||||||||||||||||    
T  17245651 ggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggac 17245704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 665
Target Start/End: Original strand, 52087757 - 52087806
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagt 665  Q
    |||||| |||||||||||||||||   |||| ||||||||||||||||||    
T  52087757 aggggactaaaattatcaaaattgaatcaaattgaataaaagaaataagt 52087806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 5e-37; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 492 - 691
Target Start/End: Complemental strand, 35758266 - 35758064
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacggaagaagacgaa---agtatataaattagttgatgatgatacactataaaatctaatagac 588  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||| |||   |||| ||||||||| || || ||||||||| |||||||| ||||||    
T  35758266 ttatgaagatgatgaaggatgaatgtagatgaagagagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagac 35758167  T
Q  589 cttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
     ||||||||||||||   ||          |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||    
T  35758166 attcgtaatccaacggtttgttttttttttggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggaccggcagattgattaa 35758067  T
Q  689 gcc 691  Q
    |||    
T  35758066 gcc 35758064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 530 - 673
Target Start/End: Original strand, 28777584 - 28777727
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||  ||        ||||||||||||||    
T  28777584 ggaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatt 28777683  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  28777684 atcaaaattggaccaaattgaataaaagaaatcagttaagggac 28777727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 505 - 670
Target Start/End: Original strand, 47431058 - 47431224
Alignment:
Q  505 gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    |||||||||||||| |||||||| | ||||||||| ||||||| ||||||||| ||  | ||||||||||||||||||||||||||| | ||||||||||    
T  47431058 gaaggatgaatgtagatgaagatgatggaagaagaagaaagtaaataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacg 47431157  T
Q  604 acctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
      ||        ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  47431158 gtctctttttttaggggattaaaattatcaaaattggaccaaattgaacaaaagaaataagttaagg 47431224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 28776668 - 28776526
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || |||||||||| |||||||||| |||||||| ||||||||||||  ||        |||||||||||||||    
T  28776668 gaagaagaagaaagtaaataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaatta 28776569  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| |||||||||||    
T  28776568 tcaaaattggaccaaattgaataaaagaaatcagttaagggac 28776526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 46903495 - 46903664
Alignment:
Q  505 gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    |||||||||||| | ||||| || | ||||||||| ||||||| ||||||||| || || ||||||||||||||||||||||||||| ||||||||||||    
T  46903495 gaaggatgaatgaagatgaaaatgatggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacg 46903594  T
Q  604 acctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
      ||        ||||||||||||| ||||||||||  ||||| ||||||||||||||||||||| ||||    
T  46903595 gtctttttttttaggggattaaaatcatcaaaattgtaccaaattgaataaaagaaataagttaaaggac 46903664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 31937255 - 31937113
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| | ||||||| || || |||||||||||||||||| |||||||| ||||||||||||  ||        |||||||||||||||    
T  31937255 gaagaagaagaaagtaaaaaaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatta 31937156  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||||||||||||| |||||||| |||||||    
T  31937155 tcaaaattggaccaaaatgaataaaataaataagtgaagggac 31937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 531 - 668
Target Start/End: Original strand, 37610661 - 37610798
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||  ||        |||||||||||||||    
T  37610661 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaatta 37610760  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    |||||||||| ||||| ||||||||| |||||||||||    
T  37610761 tcaaaattggaccaaattgaataaaaaaaataagttaa 37610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 550 - 673
Target Start/End: Original strand, 31938224 - 31938347
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || |||||||||||||||||| |||||||||||||||||||||  ||        |||||||||||||||| |||||||| | ||| ||    
T  31938224 aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 31938323  T
Q  650 aataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||    
T  31938324 aataaaagaaataagttaagggac 31938347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 530 - 673
Target Start/End: Complemental strand, 46902552 - 46902409
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||| | || |  |||||||||||||||||| |||||||| ||||||| ||| | ||        ||||||||||||||    
T  46902552 ggaagaagaagaaagtaaataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaatt 46902453  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||    
T  46902452 atcaaaattgcaccaaattgaataaaagaaataagttaagggac 46902409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 2233203 - 2233345
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| |||||||  |||||||| || || |||||| ||||||||||| ||||| || | ||||||||||| ||        || ||||||||||||    
T  2233203 gaagaagaagaaagtaattaaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacgatctctttttttagaggattaaaatta 2233302  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  2233303 tcaaaattggaccaaattgaataaaagaaataagttaagggac 2233345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 494 - 673
Target Start/End: Original strand, 35759088 - 35759271
Alignment:
Q  494 atgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacc 589  Q
    |||||||||| ||| |||||||||| ||||||||  ||    ||||||| ||||||| ||||||||| || || ||||||||| |||||||| ||||||     
T  35759088 atgaagatgatgaatgatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagaca 35759187  T
Q  590 ttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||  |||           ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  35759188 ttcgtaatccaacggtctgttttttttttagattaaaattatcaaaattggaccaaattgaataaaagaaataaattaagggac 35759271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 673
Target Start/End: Complemental strand, 5689936 - 5689797
Alignment:
Q  534 gaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatca 633  Q
    ||||| ||||||| ||||||||  || || |||||||||||||||||| |||||||| ||||||||||||  ||        |  |||||||||||||||    
T  5689936 gaagaagaaagtaaataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatca 5689837  T
Q  634 aaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||| ||||| | ||||||||||||||||||||||||    
T  5689836 aaattggaccaaatttaataaaagaaataagttaagggac 5689797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 43393951 - 43394094
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  ||        ||||| |||||||||    
T  43393951 gaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaatta 43394050  T
Q  631 tcaaaattggcccaaaatgaataaaag-aaataagttaagggac 673  Q
    |||||||||| ||||  |||||||||| ||||||||||||||||    
T  43394051 tcaaaattggaccaatttgaataaaagaaaataagttaagggac 43394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 17741050 - 17740908
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| |||||||| |||  ||        |  ||||||||||||    
T  17741050 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaatta 17740951  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  |||| | ||||||||||||||||||||||||    
T  17740950 tcaaaattggatcaaatttaataaaagaaataagttaagggac 17740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 19042370 - 19042228
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| |||||||| |||  ||        |  ||||||||||||    
T  19042370 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaatta 19042271  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  |||| | ||||||||||||||||||||||||    
T  19042270 tcaaaattggatcaaatttaataaaagaaataagttaagggac 19042228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 37609541 - 37609399
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || |||||| ||||||| |||||| |||||||| | ||||||||||  ||        |||||||||||||||    
T  37609541 gaagaagaagaaagtaaataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaatta 37609442  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||||||  |||| ||||||||||||||||||| ||||||    
T  37609441 ttaaaattggatcaaattgaataaaagaaataagttgagggac 37609399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 21729086 - 21729228
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||| || ||||||| ||||||||| || ||||||||||||||||||| |  ||||||||| |||||||| |  ||        || ||||||||||||    
T  21729086 gaagatgaagaaagtaaataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaatta 21729185  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||   |||| ||||||||||||||||||||||||||    
T  21729186 tcaaaattgaatcaaattgaataaaagaaataagttaagggac 21729228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 665
Target Start/End: Complemental strand, 52522146 - 52522013
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| |||||||||||   ||        ||||||||||| |||    
T  52522146 gaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtct-tttttttaggggattaaagtta 52522048  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagt 665  Q
    |||||||||| ||||| ||||||||| ||||||||    
T  52522047 tcaaaattggaccaaattgaataaaataaataagt 52522013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 54353210 - 54353101
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||| ||||||||| |||||||||||||||||||||  ||         ||||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  54353210 tgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagtaaaagaaataa 54353111  T
Q  664 gttaagggac 673  Q
    ||||||||||    
T  54353110 gttaagggac 54353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 10979244 - 10979293
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10979244 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 11348540 - 11348589
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11348540 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 11348589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 17116421 - 17116280
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||  ||||||||| || || |||||||||||||| ||| || ||||| ||||||||||||   |        |||| ||||||||||    
T  17116421 gaagaagaagaaagtgaataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttaggg-attaaaatta 17116323  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  17116322 tcaaaattgaaccaaattgaataaaagaaataagttaagggac 17116280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 31937084 - 31937035
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31937084 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31937035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 31938376 - 31938425
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31938376 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31938425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 34014557 - 34014508
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34014557 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 34014508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 47429839 - 47429771
Alignment:
Q  534 gaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaac 602  Q
    ||||| ||||||| ||||||||| || || ||||||||||||||||||||||||||| |||||||||||    
T  47429839 gaagaagaaagtaaataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaac 47429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 43394123 - 43394170
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43394123 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 667
Target Start/End: Original strand, 47917511 - 47917647
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||| | || || | |||||||||||||||| ||| |||| ||||||||||| | ||        |||||||||||||||    
T  47917511 gaagaagaggaaagtaaataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaatta 47917610  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagtta 667  Q
    | |||||| |  |||| ||||||||||||||||||||    
T  47917611 ttaaaattagatcaaattgaataaaagaaataagtta 47917647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 531 - 670
Target Start/End: Complemental strand, 11347032 - 11346893
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||| || ||||||| ||||||||| || || |||||||||||| ||| |  ||||||||| |||||||| |  ||        |||||||||||||||    
T  11347032 gaagatgaagaaagtaaataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaatta 11346933  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    ||||||||||  |||| |||||||||||||||| ||||||    
T  11346932 tcaaaattggaacaaattgaataaaagaaataaattaagg 11346893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 648 - 690
Target Start/End: Original strand, 35759306 - 35759348
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35759306 tgaataaaagaaataagttaagggaccggcagatcaattaagc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 2232651 - 2232602
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  2232651 ccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 2232602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 2232822 - 2232680
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||| | ||||||| ||||||||| || || ||||||||  |||||||| |||||||| |||||||||| |  ||        |||||||||||||||    
T  2232822 gaagaaaaagaaagtaaataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaatta 2232723  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||||||   ||| |||||||||||||||| |||||||||    
T  2232722 ttaaaattggattaaattgaataaaagaaataaattaagggac 2232680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 17116251 - 17116202
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  17116251 ccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 17116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 17117468 - 17117517
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  17117468 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 17117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 17742276 - 17742333
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||||||||||||  |||| | ||||||||||||||||||||||||    
T  17742276 aggggattaaaattatcaaaattggatcaaatttaataaaagaaataagttaagggac 17742333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 19043596 - 19043653
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||||||||||||  |||| | ||||||||||||||||||||||||    
T  19043596 aggggattaaaattatcaaaattggatcaaatttaataaaagaaataagttaagggac 19043653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 21727959 - 21727910
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  21727959 ccaaattgaataaaagaaataagttatgggaccggcagatcaattaagcc 21727910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 23073272 - 23073414
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||  |||||| | ||| |||| |||||| |||||  ||        |||||||||||||||    
T  23073272 gaagaagaagaaagtaaataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaatta 23073371  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||  |||   ||||||||||||||||||||||||||    
T  23073372 tcaaaattgaaccagtttgaataaaagaaataagttaagggac 23073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 23073443 - 23073492
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  23073443 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 23073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 24376497 - 24376546
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  24376497 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 24376546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 28777756 - 28777805
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  28777756 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 28777805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 53101842 - 53101891
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  53101842 ccaaattgaataaaagaaataacttaagggaccggcagatcaattaagcc 53101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 53765949 - 53766006
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||| ||||||||  |||| ||||||||||||||||||||||||||    
T  53765949 aggggattaaaattattaaaattggatcaaattgaataaaagaaataagttaagggac 53766006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 54354374 - 54354431
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  54354374 agggaattaaaattatcaaaattggaccaaattgaatcaaagaaataagttaagggac 54354431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 648 - 688
Target Start/End: Original strand, 5691169 - 5691209
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5691169 tgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 550 - 663
Target Start/End: Complemental strand, 10978206 - 10978093
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||   |        |||||||||||||||| |||||||| | ||  ||    
T  10978206 aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattattaaaattggactaagttg 10978107  T
Q  650 aataaaagaaataa 663  Q
    ||||||||||||||    
T  10978106 aataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 648 - 688
Target Start/End: Original strand, 37610801 - 37610841
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37610801 tgaataaaagaaataagttaagggaccggcagatcaattaa 37610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 616 - 672
Target Start/End: Original strand, 52525342 - 52525398
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaaggga 672  Q
    |||||||||||||||| |||||||| | ||| |||||||||||||||||||||||||    
T  52525342 aggggattaaaattattaaaattggactaaattgaataaaagaaataagttaaggga 52525398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 642 - 690
Target Start/End: Original strand, 53766035 - 53766083
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  53766035 ccaaattgaataaaagaaataagttaagggacccgcagatcaattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 2233380 - 2233423
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  2233380 tgaataaaagaaataagttaagggaccgacagatcaattaagcc 2233423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 548 - 668
Target Start/End: Original strand, 53180719 - 53180839
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    ||||||||| || || |||||||||||| ||||| |||||||| ||||||||||||  ||        || ||||||||||||| |||||||| | |||     
T  53180719 ataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaat 53180818  T
Q  648 tgaataaaagaaataagttaa 668  Q
    ||||||||| |||||||||||    
T  53180819 tgaataaaaaaaataagttaa 53180839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 46902380 - 46902334
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  46902380 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaa 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 55209831 - 55209785
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  55209831 ccaaattgaataaaagaaataagttaagggaccggtagatcaattaa 55209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 619 - 673
Target Start/End: Complemental strand, 55209914 - 55209860
Alignment:
Q  619 ggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  55209914 ggattaaaattatcaaaattggaccaaattaaataaaagaaataaattaagggac 55209860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 620 - 673
Target Start/End: Complemental strand, 21728041 - 21727988
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||   |||| ||||||||||||||||||||||||||    
T  21728041 gattaaaattatcaaaattgaatcaaattgaataaaagaaataagttaagggac 21727988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 23091240 - 23091191
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  23091240 ccaaattgaataaaagaaataagttaaaagaccggcagatcaattaagcc 23091191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 673
Target Start/End: Original strand, 33113306 - 33113359
Alignment:
Q  621 attaaaattatcaaaattggcccaaaatgaat-aaaagaaataagttaagggac 673  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggac 33113359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 687
Target Start/End: Complemental strand, 43392675 - 43392630
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaatta 687  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||    
T  43392675 ccaaattgaataaaagaaataagttaagggaccgacagatcaatta 43392630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 50881092 - 50881149
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||  | ||| |||||||||||||||| |||||||||    
T  50881092 aggggattaaaattatcaaaattgaactaaattgaataaaagaaataaattaagggac 50881149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 53764563 - 53764506
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||| | | ||| ||||||||||||||||||||| ||||    
T  53764563 aggggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggac 53764506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 54354468 - 54354509
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  54354468 aataaaagaaataggttaagggaccggcagatcaattaagcc 54354509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 673
Target Start/End: Original strand, 5691026 - 5691134
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    ||||||||| |||||||| |||||||| ||||||||||||  ||        |||||||| |||||||||||||||| | ||  | ||||||||||||||    
T  5691026 tgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattggac-aagtttaataaaagaaataa 5691124  T
Q  664 gttaagggac 673  Q
    ||||||||||    
T  5691125 gttaagggac 5691134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 690
Target Start/End: Complemental strand, 37609362 - 37609322
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  37609362 aataaaagaaataagttaaaggaccggcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 690
Target Start/End: Complemental strand, 47429676 - 47429628
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  47429676 ccaaattgaataaaagaaataagttaagggacatgcagatcaattaagc 47429628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 656
Target Start/End: Complemental strand, 50879907 - 50879782
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||| | | ||||||| || || |||||||||||||||||| |||||||| ||||||| |||||  |        | |||||||||||||    
T  50879907 gaagaagaagaaaggaaacaaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttctatgggattaaaatta 50879808  T
Q  631 tcaaaattggcccaaaatgaataaaa 656  Q
    |||||||||| | ||| |||||||||    
T  50879807 tcaaaattggacaaaattgaataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 50881179 - 50881227
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||    
T  50881179 caaattgaataaaagaaataagttaagggaccgacacatcaattaagcc 50881227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 53178749 - 53178701
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  53178749 caaattgaataaaaaaaataagttaagggatcggcagatcaattaagcc 53178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 670
Target Start/End: Complemental strand, 53178834 - 53178782
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    ||||||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  53178834 gggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaagg 53178782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 54353071 - 54353023
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  54353071 caaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 54353023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 505 - 670
Target Start/End: Original strand, 11348340 - 11348508
Alignment:
Q  505 gaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatcca 600  Q
    |||||||||||||| | ||||||| ||    ||||||| ||||||| || |||||| || || ||||| |||||||||||| |||||||| |||||| ||    
T  11348340 gaaggatgaatgtagaggaagataagggaagaagaagaagaaagtaaattaattaggtg-tggtgatatactataaaatctgatagacctccgtaattca 11348438  T
Q  601 acgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    |||  ||        | || ||||||||||||||||||||  |||| | |||||||||||| ||||||||    
T  11348439 acggtctctttttctaaggaattaaaattatcaaaattggatcaaattaaataaaagaaattagttaagg 11348508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 636 - 691
Target Start/End: Original strand, 46986153 - 46986208
Alignment:
Q  636 attggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||| |||||||||||||||| ||||||| |||||| ||||||||||||    
T  46986153 attggaccaaattgaataaaagaaataaattaaggggccggcaaatcaattaagcc 46986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 52525428 - 52525475
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  52525428 ccaaattgaataaaagaaataagttaagggaccgacaaatcaattaag 52525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 619 - 670
Target Start/End: Original strand, 55210894 - 55210945
Alignment:
Q  619 ggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  55210894 ggattaaaattatcaaaattgatccaaatttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 688
Target Start/End: Original strand, 15290566 - 15290604
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  15290566 aataaaagaaataagttaagggaccgacagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 52521976 - 52521930
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  52521976 ccaaattgaattaaagaaataagttaagggaccagcagatcaattaa 52521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 17742362 - 17742411
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||  ||||||||    
T  17742362 ccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcc 17742411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 19043682 - 19043731
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||  ||||||||    
T  19043682 ccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcc 19043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 669
Target Start/End: Complemental strand, 23091322 - 23091273
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
    |||||||||||||||| |||| ||||| |||||||||||| |||||||||    
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaag 23091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 34015837 - 34015886
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| ||||||||||| || ||||||||||||    
T  34015837 ccaaattgaataaaagaaataacttaagggaccgacaaatcaattaagcc 34015886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 46903693 - 46903742
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||||||    
T  46903693 ccaaattgaataaaagaaataagttaagggactgaaagatcaattaagcc 46903742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 690
Target Start/End: Complemental strand, 11346853 - 11346813
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  11346853 aataaaagaaataaattaagggaccgacagatcaattaagc 11346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 689
Target Start/End: Original strand, 33113379 - 33113426
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||||||||    
T  33113379 ccaaattgaataaaagaaataaattaagggatcggtagatcaattaag 33113426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 53180874 - 53180920
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  53180874 caaattgaataaaa-aaataagttaagggaccggcaaatcaattaagc 53180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 690
Target Start/End: Complemental strand, 27749149 - 27749107
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||    
T  27749149 tgaataaaagacataagttaaggaaccggtagatcaattaagc 27749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 616 - 658
Target Start/End: Complemental strand, 47429755 - 47429713
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaaga 658  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||    
T  47429755 aggggattaaaattatcaaaattggaccaaattgaacaaaaga 47429713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 639 - 689
Target Start/End: Complemental strand, 53101594 - 53101545
Alignment:
Q  639 ggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    |||||||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  53101594 ggcccaaattgaataaaagaa-taaattaaaggaccggcagatcaattaag 53101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 55210001 - 55209931
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaa 601  Q
    ||||||||  |||||| ||||||||| || || | |||||||||||| ||| |||||||| ||||||||||    
T  55210001 gaagaagaataaagtaaataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaa 55209931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Complemental strand, 5689766 - 5689725
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||| ||||||| || |||||||||||||||    
T  5689766 aataaaagaaataagctaagggagcgacagatcaattaagcc 5689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 27750500 - 27750549
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||| |||| |||||||||||| ||||    
T  27750500 ccaaattgaataaaagaaataaattaaaggactggcagatcaattgagcc 27750549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 604
Target Start/End: Original strand, 33111743 - 33111816
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacga 604  Q
    |||||||| ||||||| ||||||||| ||  |  ||||||||||||||| | |||||||| |||||| ||||||    
T  33111743 gaagaagaagaaagtaaataaattaggtgtgggagatacactataaaattttatagacctccgtaatacaacga 33111816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 44116763 - 44116804
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  44116763 aataaaagaattaagttaagggaccggaggatcaattaagcc 44116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 1e-34; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 530 - 670
Target Start/End: Complemental strand, 19229059 - 19228919
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||||||||||  ||        ||||||||||||||    
T  19229059 ggaagaagaagaaagtaaataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaatt 19228960  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagg 670  Q
    ||||||||||| ||||| |||||||||||||| ||||||||    
T  19228959 atcaaaattggaccaaattgaataaaagaaatcagttaagg 19228919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 496 - 669
Target Start/End: Complemental strand, 12372573 - 12372396
Alignment:
Q  496 gaagatgaagaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacctt 591  Q
    |||||||| |||||||||||||| ||||||||  |    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||||    
T  12372573 gaagatgatgaaggatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctt 12372474  T
Q  592 cgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
    ||||||||||||   ||       |||| ||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  12372473 cgtaatccaacggtatgtttttttagggtattaaaattatcaaaattggatcaaattgaataaaacaaataagttaag 12372396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 19229971 - 19230113
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||  || ||||||||||||||||||| | |||||||| ||||||||||||  ||        |||||||||||||||    
T  19229971 gaagaagaagaaagtaaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaatta 19230070  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||||||| |||||||||||    
T  19230071 tcaaaattggaccaaattgaataaaagaaatcagttaagggac 19230113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 531 - 691
Target Start/End: Complemental strand, 4032043 - 4031881
Alignment:
Q  531 gaagaagacgaaagta--tataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaat 628  Q
    |||||||| |||||||  |||||||||| || || ||||||||||||||||||  ||||| | |||||| |||||  ||        || ||||||||||    
T  4032043 gaagaagaagaaagtaaatataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaat 4031944  T
Q  629 tatcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  4031943 tatcaaaattggactaaattgaataaaagaaataagttaagtgaccggcagatcaattaagcc 4031881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 492 - 669
Target Start/End: Original strand, 6803480 - 6803660
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||| ||| |||||||||| ||||||||  ||    ||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||    
T  6803480 ttatgaagatgacgaatgatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgataga 6803579  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
    | || |||||| ||||  |||       |  |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  6803580 cttt-gtaatctaacggtctgtttttttaaaggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaag 6803660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 564 - 673
Target Start/End: Original strand, 9083227 - 9083336
Alignment:
Q  564 tgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataa 663  Q
    |||||||||||||||||| |||||||||||||||||||||  ||        ||||||||||||||||||||||||| ||||| ||||||||| ||| ||    
T  9083227 tgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaataaaataaaaaa 9083326  T
Q  664 gttaagggac 673  Q
    ||||||||||    
T  9083327 gttaagggac 9083336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 689
Target Start/End: Original strand, 4032923 - 4033081
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||| ||| || | |||||||| |||||||||| |||||||| ||||||||||||  ||        || ||||||||||||    
T  4032923 gaagaagaagaaagtaaataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaatta 4033022  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    | |||||||| ||||  | ||||||| ||||||||||| ||| || |||||||||||||    
T  4033023 ttaaaattggaccaagttaaataaaaaaaataagttaaaggatcgacagatcaattaag 4033081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 9082114 - 9082057
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  9082114 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 9082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 13276868 - 13276819
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13276868 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 13276819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 13278129 - 13278271
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    ||||||||  |||||| ||||||||| || || |||||||||||||||||| |||||||| | ||||||||||  ||        | |||||||||||||    
T  13278129 gaagaagaataaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaatta 13278228  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||  |||| ||||  ||| ||||||||||||||||    
T  13278229 tcaaaattggatcaaattgaagtaaaaaaataagttaagggac 13278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 39349700 - 39349558
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||| ||| |||||||||||||||||| ||||||| ||||  |         |||||||||||||||    
T  39349700 gaagaagaagaaagtaaataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaatta 39349601  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | |||||||  ||||| ||| ||||||||||||||||| ||||    
T  39349600 taaaaattgaaccaaattgagtaaaagaaataagttaaaggac 39349558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 548 - 673
Target Start/End: Original strand, 18655567 - 18655692
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    |||||||| ||| || ||||||||  |||||||| |||||| |||||||| |||||  ||        |||||||||||||||||||| |||| |||||     
T  18655567 ataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaat 18655666  T
Q  648 tgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||| |||||||||    
T  18655667 tgaataaaagaaataaattaagggac 18655692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 618 - 673
Target Start/End: Complemental strand, 13276952 - 13276897
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  13276952 gggattaaaattatcaaaatttgaccaaattgaataaaagaaataagttaagggac 13276897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 550 - 673
Target Start/End: Original strand, 39350562 - 39350685
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  ||        || ||||||||||||| |||||||| ||||| |     
T  39350562 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattggaccaaatta 39350661  T
Q  650 aataaaagaaataagttaagggac 673  Q
    | ||||||||||||||||||||||    
T  39350662 agtaaaagaaataagttaagggac 39350685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 8447126 - 8447077
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  8447126 ccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 8447077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 12372363 - 12372314
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  12372363 ccaaattgaataaaacaaataagttaagggaccggcagatcaattaagcc 12372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 12373708 - 12373761
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  12373708 gattaaaattatcaaaattggaccaaattgaataaaataaataagttaagggac 12373761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 18654345 - 18654296
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18654345 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 18654296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 673
Target Start/End: Complemental strand, 18654500 - 18654374
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaa 647  Q
    ||||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  ||        | ||||||||||| ||||||||||| |||||     
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  648 tg-aataaaagaaataagttaagggac 673  Q
    |  ||||||||||||||||||||||||    
T  18654400 tttaataaaagaaataagttaagggac 18654374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 18655721 - 18655770
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  18655721 ccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 18655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 689
Target Start/End: Complemental strand, 19228887 - 19228840
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  19228887 ccaaattgaataaaagaaataaattaagggaccggcagatcaattaag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 618 - 673
Target Start/End: Complemental strand, 39164188 - 39164134
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  39164188 gggattaaaat-atcaaaattggaccaaattgaataaaagaaataagttaagggac 39164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 39350720 - 39350763
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  39350720 tgaataaaagaaataagttaagggaccggcatatcaattaagcc 39350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 530 - 603
Target Start/End: Original strand, 12373614 - 12373687
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||||||| ||||||| ||||||||| || || ||||||| | |||||||| |||||| ||||||||||||||    
T  12373614 ggaagaagaagaaagtaaataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacg 12373687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 19230142 - 19230191
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  19230142 ccaaattgaataaaagaaataaattaagggatcggcagatcaattaagcc 19230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 39349529 - 39349480
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  39349529 ccaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 12373796 - 12373839
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  12373796 tgaataaaagaaataagttaaaggaccggcggatcaattaagcc 12373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 6803701 - 6803742
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  6803701 aataaaagaaataaattaagggaccgacagatcaattaagcc 6803742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 9082027 - 9081979
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||| |||||||| ||||| ||||||||||||||    
T  9082027 caaattgaataaaagaaatgagttaaggaaccggtagatcaattaagcc 9081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 688
Target Start/End: Complemental strand, 6802012 - 6801977
Alignment:
Q  653 aaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||| |||||||||||||    
T  6802012 aaaagaaataagttaagggaccagcagatcaattaa 6801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Complemental strand, 25001690 - 25001643
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||| ||||||||||||||||||||| |||||| || |||||||||||    
T  25001690 caaattgaataaaagaaataagttaaaggaccgacatatcaattaagc 25001643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 642 - 688
Target Start/End: Original strand, 13278300 - 13278346
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||||    
T  13278300 ccaaattgaataaaaaaaataaattaagggaccgacagatcaattaa 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 9083365 - 9083414
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||| | |||||  ||||||||||||||||||||    
T  9083365 ccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagcc 9083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 35952505 - 35952554
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||| | ||||||| |||||||    
T  35952505 ccaaattgaataaaagaaataagttaaaggactgacagatcagttaagcc 35952554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 492 - 668
Target Start/End: Complemental strand, 30641060 - 30640880
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||| |||||||||||||| ||||||||| ||    ||||||| ||||||| ||||||||| || || |||||||||||||||| | |||||    
T  30641060 ttatgaagatgatgaaggatgaatgtagatgaagataagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatttgataga 30640961  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
    ||| ||||||||||||  ||        |||||||||||||||| ||||||||  |||| |||||||||||||||||||||    
T  30640960 cctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggatcaaattgaataaaagaaataagttaa 30640880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 492 - 667
Target Start/End: Original strand, 26366049 - 26366228
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||| |||||||||||||| | ||||||  |    |||||||| ||||||| ||||||||  || || ||||||||||||||||||||||||    
T  26366049 ttatgaagatgatgaaggatgaatgtagaagaagattagggaagaagaagaagaaagtaaataaattatgtgttggtgatacactataaaatctaataga 26366148  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagtta 667  Q
    ||| ||||||| ||||  ||        |||||||||||||||| |||| ||| ||||| ||||||||||||||||||||    
T  26366149 cctccgtaatctaacggtctttttttttaggggattaaaattattaaaaatggaccaaattgaataaaagaaataagtta 26366228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 492 - 668
Target Start/End: Complemental strand, 26365001 - 26364824
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    |||| ||||||| |||||||||| ||| |||||||| | ||||||||| |||| || ||||||||| || || ||||||| |||||||||| ||||||||    
T  26365001 ttataaagatgatgaaggatgaacgtagatgaagatgagggaagaagaagaaactaaataaattaggtgttggtgatacattataaaatctgatagacct 26364902  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaa 668  Q
      |||||||||||  ||        || ||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  26364901 ctgtaatccaacggtctctttttttagaggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaa 26364824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 507 - 673
Target Start/End: Original strand, 521970 - 522137
Alignment:
Q  507 aggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgac 605  Q
    |||||||||||| |||||||| | ||||||||| ||||||| |||||||||  | || |||||||||||||||| | |||||||| |||||||||||       
T  521970 aggatgaatgtagatgaagatgagggaagaagaagaaagtaaataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagt 522069  T
Q  606 ctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||        ||||||||||||||||||||||| |  |||| ||||||||| ||||||||||||||||    
T  522070 ctctttttctaggggattaaaattatcaaaattagatcaaattgaataaaataaataagttaagggac 522137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 492 - 669
Target Start/End: Original strand, 30644563 - 30644740
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagacct 590  Q
    |||||||||||| |||||||||||||| |||||||| | |||||||||  ||| || ||||||||| || || |||| || |||||||| | ||||||||    
T  30644563 ttatgaagatgatgaaggatgaatgtagatgaagatgagggaagaagaaaaaactaaataaattaggtgttggtgatccattataaaatttgatagacct 30644662  T
Q  591 tcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
     ||||||||||||  ||        || ||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  30644663 ccgtaatccaacggtct-cttttttagaggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaag 30644740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 41637051 - 41636909
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || |||||||| ||||||||| |||||| | ||||||||||||  ||        |||||||||||||||    
T  41637051 gaagaagaagaaagtaaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaatta 41636952  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||| |||| ||||| |||||||||||||||| |||||||||    
T  41636951 taaaagttggaccaaattgaataaaagaaataaattaagggac 41636909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 530 - 673
Target Start/End: Original strand, 9245328 - 9245471
Alignment:
Q  530 ggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatt 629  Q
    ||||||||| ||||||| ||||||||| || || |||||||||||||||||| ||||||||  | |||||||||  ||        ||||||||||||||    
T  9245328 ggaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaatt 9245427  T
Q  630 atcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    || |||||||| | ||| ||||||||| |||||| |||||||||    
T  9245428 ataaaaattggactaaattgaataaaataaataaattaagggac 9245471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 535 - 673
Target Start/End: Complemental strand, 9244281 - 9244143
Alignment:
Q  535 aagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaa 634  Q
    |||| |||| || ||||||||| || || |||||||||||||||||| |||||||| |||||||| |||  ||        | |||||||||||||||||    
T  9244281 aagaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaattatcaa 9244182  T
Q  635 aattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||  ||||| ||||||||| ||||||||||||||||    
T  9244181 aattgaaccaaattgaataaaataaataagttaagggac 9244143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 26365839 - 26365890
Alignment:
Q  371 tttttgagagaagaagacatgaatattggggttttaaaagcataatttgatg 422  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26365839 tttttgagagaagaagacatgaagattggggttttaaaagcataatttgatg 26365890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 20309143 - 20309001
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| |  || |||||||||||||||||| ||||||||  || ||||||||  ||        ||||||| |||||||    
T  20309143 gaagaagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaatta 20309044  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||  ||||| |||||||||    
T  20309043 tcaaaattggaccaaattgaataaaaacaataaattaagggac 20309001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 21095776 - 21095634
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| |  || |||||||||||||||||| ||||||||  || ||||||||  ||        ||||||| |||||||    
T  21095776 gaagaagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaatta 21095677  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||||  ||||| |||||||||    
T  21095676 tcaaaattggaccaaattgaataaaaacaataaattaagggac 21095634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 26364790 - 26364741
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26364790 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 26364741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 505 - 673
Target Start/End: Complemental strand, 43584655 - 43584486
Alignment:
Q  505 gaaggatgaatgtatatgaagat-acggaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    |||||| ||||| | |||||||| | ||||||||| ||||||| |||||||||    || ||||||| |||||||||| |||||| || |||||||||||    
T  43584655 gaaggacgaatgaagatgaagatgatggaagaagaagaaagtaaataaattagacattggtgatacattataaaatctgatagacttttgtaatccaacg 43584556  T
Q  604 acctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
      ||        |   |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  43584555 gtctctttttttaaaagattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggac 43584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 20308966 - 20308923
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20308966 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 20308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 21095599 - 21095556
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21095599 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 21095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 673
Target Start/End: Complemental strand, 34642874 - 34642743
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattgg 640  Q
    |||||| ||||||||| || || ||||| |||||||||||| |||||||| || |||||||||   |        |||||||||||||||||||||||      
T  34642874 aaagtaaataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggttt-tttttttaggggattaaaattatcaaaattaa 34642776  T
Q  641 cccaaaatgaataaaagaaataagttaagggac 673  Q
     ||||| ||||||||||||||||||||||||||    
T  34642775 accaaattgaataaaagaaataagttaagggac 34642743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 648 - 691
Target Start/End: Original strand, 41638227 - 41638270
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41638227 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 41638270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 3714589 - 3714638
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  3714589 ccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 3714638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 9244114 - 9244065
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  9244114 ccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 9244065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 616 - 673
Target Start/End: Original strand, 41638135 - 41638192
Alignment:
Q  616 aggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||||||||||| ||||    
T  41638135 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaaaggac 41638192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 618 - 673
Target Start/End: Original strand, 20310037 - 20310092
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  20310037 gggattaaaattatcaaaattgaaccaaatcgaataaaagaaataagttaagggac 20310092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 618 - 673
Target Start/End: Original strand, 21096670 - 21096725
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  21096670 gggattaaaattatcaaaattgaaccaaatcgaataaaagaaataagttaagggac 21096725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 689
Target Start/End: Complemental strand, 34642714 - 34642667
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  34642714 ccaaattgaataaaagaaataagttaagagaccggcagatcaattaag 34642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 20310121 - 20310170
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  20310121 ccaaaatgaataaaagaaataagttaagggacgagcagattaattaagcc 20310170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 21096754 - 21096803
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  21096754 ccaaaatgaataaaagaaataagttaagggacgagcagattaattaagcc 21096803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 690
Target Start/End: Original strand, 522166 - 522214
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  522166 ccaaattgaataaaagaaataagttaagggaccgacagattaattaagc 522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 43584456 - 43584408
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  43584456 caaattgaataaaagaaataagttaatggaccgacagatcaattaagcc 43584408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 642 - 688
Target Start/End: Complemental strand, 30640847 - 30640801
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  30640847 ccaaattgaataaaagaaataagttaaaggaccggcatatcaattaa 30640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 688
Target Start/End: Original strand, 43586021 - 43586059
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  43586021 aataaaagaaataagttaagggaccgacagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 26366271 - 26366312
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  26366271 aataaaagaaataagttaaaggatcggcagatcaattaagcc 26366312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 31203015 - 31202966
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||||||||||| | || ||||| |||||||||    
T  31203015 ccaaaatgaataaaagaaataagttaaggaaacgacagattaattaagcc 31202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 43134118 - 43134167
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||||| || ||||||||||||    
T  43134118 ccaaattgaataaaagaaataagttaaaggaccgacatatcaattaagcc 43134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 34644029 - 34644076
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    |||| |||||||||||||||||| ||||||||| | ||||||||||||    
T  34644029 caaattgaataaaagaaataagtcaagggaccgacggatcaattaagc 34644076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 44189752 - 44189679
Alignment:
Q  128 agatgcaacttctggagtagccccgcataatttctcatataagttgttggctgttggcattcactctacaaaattaaaggat 209  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||||||||       ||||||||||||||||||| ||||||||    
T  44189752 agatgcagcttctggagtagccc-gcagaatttcacatataagttgt-------tggcattcactctacaaaaataaaggat 44189679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 9245500 - 9245550
Alignment:
Q  642 ccaaaatgaataaaagaaataagtt-aagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||| || |||||||||||||| |||||||    
T  9245500 ccaaattgaataaaagaaataagttaaaaggaccggcagatcatttaagcc 9245550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Complemental strand, 22012194 - 22012157
Alignment:
Q  654 aaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  22012194 aaagaaataagttaagggaccgacagttcaattaagcc 22012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 691
Target Start/End: Original strand, 22013320 - 22013357
Alignment:
Q  654 aaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  22013320 aaagaaataagttaagggaccagcagttcaattaagcc 22013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 41636880 - 41636831
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||| |||||||||||| || ||||||||| ||||||||||||    
T  41636880 ccaaattgaatgaaagaaataagtaaaaggaccggcaaatcaattaagcc 41636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 60; Significance: 4e-25; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 2879 - 3067
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaagacgaaa-----gtatataaattagttgatgatgatacactataaaatctaata 585  Q
    |||| ||||||| |||||||||||||| |||||||| | ||||||||| ||||     ||| ||||||||| || || |||||||||||||||||| |||    
T  2879 ttatcaagatgatgaaggatgaatgtagatgaagatgagggaagaagaagaaaaaaaagtaaataaattaggtgttggtgatacactataaaatctgata 2978  T
Q  586 gaccttcgtaatccaacgacctgnnnnnnnagg-ggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||| ||||  |||           |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2979 gaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 3067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 492 - 673
Target Start/End: Complemental strand, 2031 - 1847
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||  |||||||||||||| ||||||||  |    |||||||| ||||||| ||||||||| || || |||||||||  |||||||||||||    
T  2031 ttatgaagatgttgaaggatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactggaaaatctaataga 1932  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||||||| ||||  ||           ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  1931 cattcgtaatctaacggtctatattttttttggattaaaattat-aaaattggaccaaattgaataaaagaaataagttaagggac 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 3096 - 3145
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  3096 ccaaattgaataaaagaaataagttaagggactggcagatcaattaagcc 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 27892191 - 27892376
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagat-acggaagaag---acgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||| ||||||| |||||||||||||| |||||||| | ||||||||   |  |||||| ||||||||| || || |||||||||||||||||| |||||    
T  27892191 ttatcaagatgatgaaggatgaatgtagatgaagatgagggaagaagaaaaaaaaagtaaataaattaggtgttggtgatacactataaaatctgataga 27892290  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||| ||||  |||           |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  27892291 ccttcgtaatctaacggtctgtttttttttttgattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggac 27892376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 531 - 673
Target Start/End: Complemental strand, 16602945 - 16602803
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| ||||||||| || || ||||||||| |||||||| |||||| | ||||||||||||  ||          |||||||||||||    
T  16602945 gaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaatta 16602846  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||  | ||||||||||||||||||||||||    
T  16602845 tcaaaattggaccaatttaaataaaagaaataagttaagggac 16602803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 492 - 673
Target Start/End: Complemental strand, 27891369 - 27891184
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacgg----aagaagacgaaagtatataaattagttgatgatgatacactataaaatctaataga 587  Q
    |||||||||||  |||||||||||||| |||||||   ||    ||||||| ||||||| ||||||||| || || |||||||||  ||||||| |||||    
T  27891369 ttatgaagatgttgaaggatgaatgtagatgaagacgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactggaaaatctgataga 27891270  T
Q  588 ccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    | ||||||||| ||||  |||            |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  27891269 cattcgtaatctaacggtctgttttttttttttattaaaattatcaaaattgaaccaaaatgaataaaagaaataagttaagggac 27891184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 27891155 - 27891106
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27891155 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 27891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 27892405 - 27892454
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27892405 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 27892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 357 - 430
Target Start/End: Original strand, 27948827 - 27948905
Alignment:
Q  357 atcgaattaatgggtttttgagagaagaagacatgaatattggggtttt-aaaagc----ataatttgatgaagatgat 430  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||    |||||||||||||||||||    
T  27948827 atcgaattaatgggtttttgagagaagaagacataaagattggggttttaaaaagcatatataatttgatgaagatgat 27948905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 38243942 - 38243995
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  38243942 gattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggac 38243995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 561 - 670
Target Start/End: Complemental strand, 23833157 - 23833048
Alignment:
Q  561 tgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatgaataaaagaaa 660  Q
    |||||||||||||||||||||  ||||||| ||||||||||||  ||        ||||||||||||||||||||||||| | ||| ||||||||| |||    
T  23833157 tgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaataaaataaa 23833058  T
Q  661 taagttaagg 670  Q
     |||||||||    
T  23833057 aaagttaagg 23833048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 23833940 - 23833988
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23833940 caaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 23833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 3604422 - 3604503
Alignment:
Q  306 aacatgatgagggaagaaccaaatatccaagatgaaaattcataaaataccatcgaattaatgggtttttgagagaagaaga 387  Q
    |||||||||| ||||||| |||| ||||||||| ||||||||||||    ||||||| |||||| |||||||||||||||||    
T  3604422 aacatgatgaaggaagaagcaaagatccaagataaaaattcataaatgggcatcgaaataatggttttttgagagaagaaga 3604503  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 16604258 - 16604307
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  16604258 ccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 16604307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 38244024 - 38244073
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  38244024 ccaaaatgaataaaagaaataaattaagggaccgacagatcaattaagcc 38244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 16602774 - 16602725
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  16602774 ccaaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 16602725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 690
Target Start/End: Original strand, 19577395 - 19577443
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagc 690  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  19577395 ccaaattgactaaaagaaataagttaagggaccgggagatcaattaagc 19577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 648 - 691
Target Start/End: Complemental strand, 43814564 - 43814521
Alignment:
Q  648 tgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  43814564 tgaataaaagaaataagttaagggaccgacaaatcaattaagcc 43814521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 691
Target Start/End: Original strand, 5034893 - 5034934
Alignment:
Q  650 aataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  5034893 aataaaagaaataagttaaaggaccggcaaatcaattaagcc 5034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 669
Target Start/End: Complemental strand, 38243014 - 38242965
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaag 669  Q
    |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  38243014 gattaaaattatcaaaattggatcaaattaaataaaagaaataagttaag 38242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 673
Target Start/End: Complemental strand, 26388351 - 26388296
Alignment:
Q  618 gggattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||||   |||| | ||||||||||||||||||| ||||    
T  26388351 gggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaaggac 26388296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 492 - 581
Target Start/End: Complemental strand, 5033721 - 5033629
Alignment:
Q  492 ttatgaagatgaagaaggatgaatgtatatgaagatacggaagaagacgaa---agtatataaattagttgatgatgatacactataaaatct 581  Q
    |||| ||||||| |||||||||||| | ||||||||  ||||||||| |||   |||| ||||||||  || || ||||||||||||||||||    
T  5033721 ttataaagatgatgaaggatgaatgaagatgaagatggggaagaagatgaagaaagtaaataaattaaatgttggtgatacactataaaatct 5033629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 649 - 691
Target Start/End: Complemental strand, 23833010 - 23832968
Alignment:
Q  649 gaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||||||| |||||||||||||||||| || ||||||||||||    
T  23833010 gaataaaataaataagttaagggaccgacaaatcaattaagcc 23832968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 26388266 - 26388220
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaag 689  Q
    |||| ||||||||| |||||||||||| ||||| |||||||||||||    
T  26388266 caaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 642 - 688
Target Start/End: Original strand, 43814650 - 43814696
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaa 688  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||||    
T  43814650 ccaaattgaataaaagaaatatgttaggggaccgacagatcaattaa 43814696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 5033527 - 5033478
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||| |||| | |||||| ||||||||    
T  5033527 ccaaattgaataaaagaaataagttaaaggactgacagatctattaagcc 5033478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 51; Significance: 1e-19; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Complemental strand, 31234 - 31111
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || |||||||||||||||||| |||||||| ||||||||||||  |||       |||||||||||||||| |||| ||| ||||| ||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  650 aataaaagaaataagttaagggac 673  Q
    | ||||||||||||||| ||||||    
T  31134 agtaaaagaaataagttgagggac 31111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Original strand, 35202 - 35325
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  |||       |||||||||||||||| |||||||| ||||| ||    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  650 aataaaagaaataagttaagggac 673  Q
    | ||||||||||||||| ||||||    
T  35302 agtaaaagaaataagttgagggac 35325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 31082 - 31033
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31082 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 35354 - 35403
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  35354 ccaaattgaataaaagaaataagttaagggaccgccagatcaattaagcc 35403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 1e-19; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Complemental strand, 79610 - 79487
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || ||||||||| |||||||| |||||||| ||||||||||||  |||       |||||||||||||||| |||||||| ||||| ||    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  650 aataaaagaaataagttaagggac 673  Q
    | ||||||||||||||| ||||||    
T  79510 agtaaaagaaataagttgagggac 79487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 550 - 673
Target Start/End: Original strand, 83578 - 83701
Alignment:
Q  550 aaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaattatcaaaattggcccaaaatg 649  Q
    ||||||| || || |||||||||||||||||| |||||||| ||||||||||||  |||       |||||||||||||||| |||| ||| ||||| ||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  650 aataaaagaaataagttaagggac 673  Q
    | ||||||||||||||| ||||||    
T  83678 agtaaaagaaataagttgagggac 83701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 83730 - 83779
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  83730 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 79458 - 79409
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  79458 ccaaattgaataaaagaaataagttaagggaccgccagatcaattaagcc 79409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 46; Significance: 9e-17; HSPs: 3)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 1670 - 1719
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1670 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 691
Target Start/End: Complemental strand, 182 - 134
Alignment:
Q  643 caaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  182 caaattgaataaaagaaataagttaagggactggcagatcaattaagcc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 531 - 673
Target Start/End: Original strand, 1499 - 1641
Alignment:
Q  531 gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacgacctgnnnnnnnaggggattaaaatta 630  Q
    |||||||| ||||||| | ||||||| || || | ||||||  |||||||| ||||||||   ||||||||||  |||       | |||||||||||||    
T  1499 gaagaagaagaaagtaaaaaaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaatta 1598  T
Q  631 tcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    |||||||||| ||||| |||||||| ||||||| |||| ||||    
T  1599 tcaaaattggaccaaattgaataaaggaaataaattaaaggac 1641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 691
Target Start/End: Original strand, 25414 - 25463
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  25414 ccaaattgaataaaagaaataagttaagggagcggcagatcaattaagcc 25463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 620 - 673
Target Start/End: Original strand, 25332 - 25385
Alignment:
Q  620 gattaaaattatcaaaattggcccaaaatgaataaaagaaataagttaagggac 673  Q
    ||||||||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  25332 gattaaaattatcaaaattggaccaaatttaataaaagaaataaattaagggac 25385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 602
Target Start/End: Original strand, 25252 - 25313
Alignment:
Q  541 aaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaac 602  Q
    |||||| ||||||||| || |||| |||||||||||||| | ||| |||| |||||||||||    
T  25252 aaagtaaataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaac 25313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 505 - 597
Target Start/End: Complemental strand, 104501 - 104405
Alignment:
Q  505 gaaggatgaatgtatatgaagatacg----gaagaagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaat 597  Q
    |||||||||||||| ||||||||  |    |||||||| ||||||| ||||||||| || || |||||||||||||||||| |||||||| ||||||    
T  104501 gaaggatgaatgtagatgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacctccgtaat 104405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 691
Target Start/End: Complemental strand, 104350 - 104301
Alignment:
Q  642 ccaaaatgaataaaagaaataagttaagggaccggcagatcaattaagcc 691  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||||    
T  104350 ccaaattgaataaaagaaataagttaagggaccgtcaaatcaattaagcc 104301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 9360 - 9305
Alignment:
Q  548 ataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacg 603  Q
    ||||||||| || || |||||||||||||||||| |||||||| ||||||||||||    
T  9360 ataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacg 9305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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