View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11760_high_15 (Length: 245)
Name: NF11760_high_15
Description: NF11760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11760_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5781807 - 5781585
Alignment:
| Q |
1 |
acttaacattgcattgcactgaatctctcattttcgtaacaataatagcgaaattcgtgtaatgaagttcaaattcgagtttcgaagttctaacaagaag |
100 |
Q |
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| T |
5781807 |
acttaacattgcattgcactgaatctctcattttcgtaacaataataacgaaattcgtgtaatgaagttcaaattcgagtttcgaagttctaacaagaag |
5781708 |
T |
|
| Q |
101 |
atgaacttgcagcatttggcaggtcacggtggtgattttgctcccagtgaaagctggagtggtccagatccggatccggatccgaatcaaaatcataaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5781707 |
atgaacttgcagcatttggcaggtcacggtggtgattttgctcccagtgaaagctggagtggtccagatccggatccggatccgaatcaaaatcataaca |
5781608 |
T |
|
| Q |
201 |
gaaaacaacatgcagattcagat |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
5781607 |
gaaaacaacatgcagattcagat |
5781585 |
T |
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