View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11760_low_17 (Length: 241)
Name: NF11760_low_17
Description: NF11760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11760_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34685954 - 34686179
Alignment:
| Q |
1 |
aatgtaattttatgtcaaattaagctatagtatagtatagtatagtataatacctggttgaggttccaacactcgattgaaaaagttacaaaatgcaggg |
100 |
Q |
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| T |
34685954 |
aatgtaattttatgtcaaattaagctatagtatagtatagtatagtataatacctggttgaggttccaacactcgattgaaaaagttacaaaatgcaggg |
34686053 |
T |
|
| Q |
101 |
gaaaattgggataagctgaacaattcactatgatgcactacttctcttagctgcttccacctgttggccatgaccttgtggctgaacttgaaaaatgact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
34686054 |
gaaaattgggataagctgaacaattcactatgatgcactacttctcttagctgcttccacctgttcgccatgaccttgtggctgaacttgaaaaatgact |
34686153 |
T |
|
| Q |
201 |
cattctctttggagttttcttgttca |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
34686154 |
cattctctttggagttttcttgttca |
34686179 |
T |
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