View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11761_high_21 (Length: 238)
Name: NF11761_high_21
Description: NF11761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11761_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 27 - 221
Target Start/End: Original strand, 39475526 - 39475720
Alignment:
| Q |
27 |
aaacgacgagttgaaagggagatcttgaattcaacaactatagtttaaggaatatattggaagtattttgagtgatcagaactaagaaaaggacagaatt |
126 |
Q |
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| T |
39475526 |
aaacgacgagttgaaagggagatcttgaattcaacaactatagtttaaggaatatattgaaagtattttgagtgatcagaactaagaaaaggacagaatt |
39475625 |
T |
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| Q |
127 |
atggattcactcacacaataagagattctgctaccacaataatatagcatgccaaaaaacgtgtagagtagcatggttgacacttgcttcatcct |
221 |
Q |
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| T |
39475626 |
atggattcactcacacaataagagattctgctaccacaataatatagcatgccaaaaaacgtgtagagtagcatggttgacacttgcttcatcct |
39475720 |
T |
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