View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11761_low_11 (Length: 405)

Name: NF11761_low_11
Description: NF11761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11761_low_11
NF11761_low_11
[»] chr8 (3 HSPs)
chr8 (17-395)||(29150954-29151332)
chr8 (181-246)||(26387133-26387198)
chr8 (229-269)||(43884856-43884896)
[»] chr2 (5 HSPs)
chr2 (112-397)||(2595112-2595394)
chr2 (124-300)||(2580375-2580551)
chr2 (125-300)||(2575995-2576169)
chr2 (170-395)||(2585807-2586028)
chr2 (332-393)||(2580619-2580677)
[»] chr6 (1 HSPs)
chr6 (114-391)||(30398208-30398478)
[»] chr7 (4 HSPs)
chr7 (170-301)||(46768559-46768689)
chr7 (170-299)||(36259410-36259539)
chr7 (170-300)||(36254531-36254661)
chr7 (170-299)||(36262222-36262342)
[»] chr3 (2 HSPs)
chr3 (114-204)||(21621218-21621308)
chr3 (114-204)||(21642888-21642978)
[»] chr4 (8 HSPs)
chr4 (170-300)||(35766191-35766321)
chr4 (170-272)||(19353603-19353705)
chr4 (170-299)||(19358295-19358424)
chr4 (181-270)||(19360627-19360716)
chr4 (170-239)||(19355222-19355291)
chr4 (197-267)||(11240745-11240815)
chr4 (220-271)||(11240665-11240716)
chr4 (170-233)||(19356700-19356763)


Alignment Details
Target: chr8 (Bit Score: 367; Significance: 0; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 17 - 395
Target Start/End: Original strand, 29150954 - 29151332
Alignment:
Q  17 tcatccaccagcattgcatccccgccgctgccgccactgctgctttcattcacaagcatcggttcgcatctccgttgagtatgagtgatcctccggttca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  29150954 tcatccaccagcattgcatccccgccgctgccgccactgctgctttcattcacaagcatcggttcgcatctccgttgagtatgagtgatcctccagctca 29151053  T
Q  117 acccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29151054 acccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgc 29151153  T
Q  217 aaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacactaatccgagataacatag 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29151154 aaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacactaatccgagataacatag 29151253  T
Q  317 gaaagaaacttattcccttcccggtgcgtcgtttaattcttcttgagaacccgtggatcctccttccggataacctttg 395  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29151254 gcaagaaacttattcccttcccggtgcgtcgtttaattcttcttgagaacccgtggatcctccttccggataacctttg 29151332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 26387133 - 26387198
Alignment:
Q  181 gatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcct 246  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||    
T  26387133 gatgtgaaatctcttatgcaaatgaggttcgtatgcaagtcttggaaatctatcatttctgatcct 26387198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 43884856 - 43884896
Alignment:
Q  229 tctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    ||||| ||||||||||||||||| || ||||||||||||||    
T  43884856 tctattatttctgatcctaaatttgttaaacttcaccttaa 43884896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 5e-66; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 112 - 397
Target Start/End: Original strand, 2595112 - 2595394
Alignment:
Q  112 gttcaacccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtg 211  Q
    ||||||||||| |||||||  ||||||||||||||| || | |||||||  |||||| |||||||||| ||||||||||| |||||||||||||| || |    
T  2595112 gttcaacccaacgcagagtttccggtaagcctctcttacgatcttatcgtcgaaatcctttccttttctgatgtgaaatcacttatgcaaatgagatgcg 2595211  T
Q  212 tatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacactaatccgagataa 311  Q
    ||||||||||||||| |||||| |||||||||| | ||||| ||||||||||||||||||| || ||||||||||||||||||||||||  ||| | |||    
T  2595212 tatgcaaatcttggaaatctattatttctgatcatgaattcatcaaacttcaccttaagcgatcggcgcgaaacccttacttgacactatcccggggtaa 2595311  T
Q  312 cataggaaagaaacttattcccttcccggtgcgtcgtttaattcttcttgagaacccgtggatcctccttccggataacctttgct 397  Q
    || ||  |  |||  | ||||||||||||||| ||||||||   | ||||||||||||| ||||||||||||||| ||||||||||    
T  2595312 cacagctagcaaatattttcccttcccggtgcatcgtttaa---tccttgagaacccgttgatcctccttccggagaacctttgct 2595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 2580375 - 2580551
Alignment:
Q  124 gcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatctt 223  Q
    |||||||||||||||||||||||| |  ||||||| |  |||||| |||| |||||  |||||||||||||||||| |||||| || |||||||||||||    
T  2580375 gcagagtcaccggtaagcctctcttatgaccttatagtcgaaatcctttcattttctaatgtgaaatctcttatgcgaatgagatgcgtatgcaaatctt 2580474  T
Q  224 ggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacacta 300  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||  || ||||||||||||||||||||||||    
T  2580475 ggagatctatcatttctgatcctaaatttatcaaacttcaccttaagcaatcggcgcgaaacccttacttgacacta 2580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 125 - 300
Target Start/End: Original strand, 2575995 - 2576169
Alignment:
Q  125 cagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttg 224  Q
    ||||||| ||| ||||||||||| |  |||||||| | ||| || ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  2575995 cagagtctccgataagcctctcttatgaccttatcaccgaagtc-tttcctttttcgatgtgaaaactcttatgcgaatgaggtgtgtatgcaaatcttg 2576093  T
Q  225 gagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacacta 300  Q
    || |||||| |||||||||||||||||| | ||||||||||||||||| || || |||||||||||||||||||||    
T  2576094 gaaatctattatttctgatcctaaattcattaaacttcaccttaagcgatcggcacgaaacccttacttgacacta 2576169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 170 - 395
Target Start/End: Original strand, 2585807 - 2586028
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| || |||| |||| || ||||| ||||||||||||||||    
T  2585807 tttccttttccgatgtgaaatctcttatgccaatgagatgtgtatgcaaatcttggaaatcaattatttttgattctgaattcatcaaacttcaccttaa 2585906  T
Q  270 gcgttccgcgcgaaacccttacttgacactaatccgagataacataggaaagaaacttattcccttcccggtgcgtcgtttaattcttcttgagaacccg 369  Q
    ||| || || ||||| ||||||||||||||| |||||| ||||||    |  | | |||||| |||   ||||| || |||||   | ||||||||||||    
T  2585907 gcgatcagcacgaaa-ccttacttgacactattccgaggtaacatccctagtagagttattctctttttggtgcatcatttaa---tccttgagaacccg 2586002  T
Q  370 tggatcctccttccggataacctttg 395  Q
    | ||||||||||||||||||||||||    
T  2586003 ttgatcctccttccggataacctttg 2586028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 2580619 - 2580677
Alignment:
Q  332 ccttcccggtgcgtcgtttaattcttcttgagaacccgtggatcctccttccggataacctt 393  Q
    |||||||| ||||||||||||||||    |||||||||| |||||||||||| |||||||||    
T  2580619 ccttcccgatgcgtcgtttaattctc---gagaacccgtcgatcctccttccagataacctt 2580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 114 - 391
Target Start/End: Original strand, 30398208 - 30398478
Alignment:
Q  114 tcaacccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatgaggtgtgta 213  Q
    ||||||||| |||||||  |||||||||||     || |||||||||| |||||| ||||||||||| |||||||||||||||||| |||| | || |||    
T  30398208 tcaacccaacgcagagtttccggtaagcctt----acgaccttatcgccgaaatcctttccttttccaatgtgaaatctcttatgctaatgcgatgagta 30398303  T
Q  214 tgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagcgttccgcgcgaaacccttacttgacactaatccgagataaca 313  Q
    ||| ||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||| || ||| ||||||| ||| |||||||| || |||  ||||    
T  30398304 tgccaatcttggaaatctattatttctgaacctgaattcgtcaaacttcaccttaagcgatcggcgtgaaacccgtacatgacactattcggaggcaaca 30398403  T
Q  314 taggaaagaaacttattcccttcccggtgcgtcgtttaattcttcttgagaacccgtggatcctccttccggataacc 391  Q
    ||    | ||| |||||||||||||||||| || |||||   |||| |||||||||| ||||||||||||| ||||||    
T  30398404 tatccgacaaaattattcccttcccggtgcatcttttaa---ttctcgagaacccgttgatcctccttccgtataacc 30398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 301
Target Start/End: Original strand, 46768559 - 46768689
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    ||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||| ||||| ||||||| |||  |||||||||| ||||     
T  46768559 tttccttctccgatgtgaaatctcttatgcgaatgagatgtgt-tgcaaatcttggaaatctattatttccgatcctatatttatcaaacttcatcttac 46768657  T
Q  270 gcgttccgcgcgaaacccttacttgacactaa 301  Q
    | ||||||| ||||||||||||||||||||||    
T  46768658 gtgttccgcacgaaacccttacttgacactaa 46768689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 36259410 - 36259539
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||| |||||||||||||| |  |||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||| || ||||| ||||||||    
T  36259410 tttcattttccgatgtgaagttccttatgcaaatgagatgtgtatgcaagtcttggaaatctataatttctgatcctaaatttgtgaaactccaccttaa 36259509  T
Q  270 gcgttccgcgcgaaacccttacttgacact 299  Q
    ||| || ||  |||||||| ||||||||||    
T  36259510 gcgatctgcaagaaaccctcacttgacact 36259539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 36254531 - 36254661
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||| ||||||||||||||||  |||||||||||||||||  | ||||| ||||||| |||| | ||||| |||||||| || || ||||| ||| ||||    
T  36254531 tttcattttccgatgtgaaattccttatgcaaatgaggtgcctttgcaagtcttggaaatctctaatttccgatcctaactttgtgaaactccacattaa 36254630  T
Q  270 gcgttccgcgcgaaacccttacttgacacta 300  Q
    ||| || ||  |||||||| |||||||||||    
T  36254631 gcgatcagcaagaaaccctcacttgacacta 36254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 36262222 - 36262342
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||| ||||| ||||| ||||  ||||||||||||||||||||||||||         |||||| ||||| |||||||  || || ||||| ||||||||    
T  36262222 tttcattttctgatgttaaattccttatgcaaatgaggtgtgtatgcaa---------atctataatttccgatcctatctttgtgaaactccaccttaa 36262312  T
Q  270 gcgttccgcgcgaaacccttacttgacact 299  Q
    ||| |||||  |||||||| ||||||||||    
T  36262313 gcgatccgcaagaaaccctcacttgacact 36262342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 21621308 - 21621218
Alignment:
Q  114 tcaacccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatg 204  Q
    ||||||||| |||||||  ||||||||||||||| || |||||||||| |||||| ||||||||||| |||||||||||||||||| ||||    
T  21621308 tcaacccaacgcagagtttccggtaagcctctcttacgaccttatcgccgaaatcctttccttttccaatgtgaaatctcttatgcgaatg 21621218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 21642978 - 21642888
Alignment:
Q  114 tcaacccaatgcagagtcaccggtaagcctctctgacaaccttatcgctgaaatcatttccttttccgatgtgaaatctcttatgcaaatg 204  Q
    ||||||||| |||||||  ||||||||||||||| || |||||||||| |||||| ||||||||||| |||||||||||||||||| ||||    
T  21642978 tcaacccaacgcagagtttccggtaagcctctcttacgaccttatcgccgaaatcctttccttttccaatgtgaaatctcttatgcgaatg 21642888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 35766191 - 35766321
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||||||||||||||||||||||||||| |||||||  ||  | ||||| |||||||  ||||| || || ||||||||||| | |||||||||||||||    
T  35766191 tttccttttccgatgtgaaatctcttatccaaatgaaatgcctttgcaagtcttggaattctataatctccgatcctaaatttgccaaacttcaccttaa 35766290  T
Q  270 gcgttccgcgcgaaacccttacttgacacta 300  Q
    ||| || || | ||||||| |||||| ||||    
T  35766291 gcgatcagcacaaaaccctcacttgatacta 35766321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 19353603 - 19353705
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||||||| ||||||| ||||||  ||||  ||||||| ||  | ||||| ||||||||    
T  19353603 tttcattttccgatgttaaattccttatgcaaatgaggtgtgtatgcaagtcttggaaatctatattttccaatcctaactttttgaaactccaccttaa 19353702  T
Q  270 gcg 272  Q
    |||    
T  19353703 gcg 19353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 19358295 - 19358424
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaa 269  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||| |  ||||||| |||||| |||||  ||||||| || || |||||  |||||||    
T  19358295 tttcgttttccgatgttaaattccttatgcaaatgaggtgtgtatggatctcttggaaatctataatttccaatcctaactttgtgaaactctaccttaa 19358394  T
Q  270 gcgttccgcgcgaaacccttacttgacact 299  Q
    ||| |  ||  |||||||| ||||||||||    
T  19358395 gcgatttgcatgaaaccctcacttgacact 19358424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 19360627 - 19360716
Alignment:
Q  181 gatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaag 270  Q
    ||||||||||  || ||| ||||||||||| ||| ||| ||||||| |||| | ||||||||||||||||| || |||||||||||||||    
T  19360627 gatgtgaaattcctcatgtaaatgaggtgtttatccaagtcttggaaatctctaatttctgatcctaaatttgtgaaacttcaccttaag 19360716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 19355222 - 19355291
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctatcatttc 239  Q
    |||| |||| |||||| ||||  |||||||||||||||||||||||||| ||||||| |||||| |||||    
T  19355222 tttcatttttcgatgttaaattccttatgcaaatgaggtgtgtatgcaagtcttggaaatctataatttc 19355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 11240745 - 11240815
Alignment:
Q  197 tgcaaatgaggtgtgtatgcaaatcttggagatctatcatttctgatcctaaattcgtcaaacttcacctt 267  Q
    |||| ||||||||  ||||||| ||||||| |||||| |||||| ||||||||||  ||||||||||||||    
T  11240745 tgcacatgaggtggatatgcaagtcttggaaatctataatttctaatcctaaatttttcaaacttcacctt 11240815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 11240716 - 11240665
Alignment:
Q  220 tcttggagatctatcatttctgatcctaaattcgtcaaacttcaccttaagc 271  Q
    ||||||| ||||||  |||| |||||||||||||| ||||||||||||||||    
T  11240716 tcttggaaatctatagtttcagatcctaaattcgtgaaacttcaccttaagc 11240665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 19356700 - 19356763
Alignment:
Q  170 tttccttttccgatgtgaaatctcttatgcaaatgaggtgtgtatgcaaatcttggagatctat 233  Q
    |||| ||||||| ||| ||||  |||||||||||||||||||||||||| ||||| | ||||||    
T  19356700 tttcattttccggtgttaaattccttatgcaaatgaggtgtgtatgcaattcttgaaaatctat 19356763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University