View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11761_low_7 (Length: 463)
Name: NF11761_low_7
Description: NF11761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11761_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 8 - 382
Target Start/End: Complemental strand, 40577703 - 40577329
Alignment:
| Q |
8 |
caaaggtatgttactgtgttctgttttgattgaaattcagattttcacttttaggtttggttcaattctcaggtcccatcctttcaggaatttgtcagat |
107 |
Q |
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| T |
40577703 |
caaaggtatgttactgtgttctgttttgattgaaattcagatttttacttttaggtttggttcaattctcaggtcccatcctttcaggaatttgtcagat |
40577604 |
T |
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| Q |
108 |
tttattctttgtttcacttcattatacaattcaattttatttaacatgtcaaaatcatctttacactttgattctcttataaagaccttattataaaata |
207 |
Q |
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| T |
40577603 |
tttattctttgtttcacttcattatacaattcaattttatttaacatgtcaaaatcatctttacactttgattctcttataaagaccttattataaaata |
40577504 |
T |
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| Q |
208 |
tttaacttgataaaatatttgtaagtggtcctgcaaagggtgtgacattaattaattaatcaatattcacatgcaggagttgaatcagctgaaccggatc |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40577503 |
tttaacttgataaaatatttgtaagtggtcctgcaaagggtgtgacattaattaattaatcaatattcacatgcaggagttgaatcagctgaaccggatc |
40577404 |
T |
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| Q |
308 |
tgaagaactcactagtgacagtgaaaggagtacttgaaactgataaattagtagaatatgtttacaagagaactg |
382 |
Q |
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| T |
40577403 |
tgaagaactcactagtgacagtgaaaggagtacttgaaactgataaattagtagaatatgtttacaagagaactg |
40577329 |
T |
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