View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11766_high_13 (Length: 317)
Name: NF11766_high_13
Description: NF11766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11766_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 7524907 - 7524620
Alignment:
| Q |
20 |
ctagagatactgaaggacatggaacacatacagcttcaacagcagctggatcagttgttggtaatgctagtttgtttggtttcgctagaggcgaagctaa |
119 |
Q |
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| T |
7524907 |
ctagagatactgaaggacatggaacacatacagcttcaacagcagctggatcagttgttggtaatgctagtttgtttggtttcgctagaggcgaagctaa |
7524808 |
T |
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| Q |
120 |
gggaatggcaacaaaagctagaattgctgcttataaaatctgttggaaacttggttgttttgattctgatattcttgctgctatggatgaagctgttgct |
219 |
Q |
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| T |
7524807 |
gggaatggcaacaaaagctagaattgctgcttataaaatctgttggaaacttggttgttttgattctgatattcttgctgctatggatgaagctgttgct |
7524708 |
T |
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| Q |
220 |
gatggggttcatgtgatttcgctttcggttggttctagtggttatgcgcctcattattatcgtgattcgattgctattggtgcctttg |
307 |
Q |
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| T |
7524707 |
gatggggttcatgtgatttcactttcggttggttctaatggttatgcgcctcattattatcgtgattcgattgctatcggtgcttttg |
7524620 |
T |
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