View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11766_high_21 (Length: 246)
Name: NF11766_high_21
Description: NF11766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11766_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 3155641 - 3155877
Alignment:
| Q |
5 |
ttgttaaattggttttacttgataaaaaatagatttgctcaatttaaagtgttgataatgtatgatatagtacgagtcnnnnnnnagtttaatcaatatc |
104 |
Q |
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| T |
3155641 |
ttgttaaattggttttacttgataaaaaatagatttgctcaagttaaagtgttgataatgtatgatatagtacgagtctttttttagtttaatcaatatc |
3155740 |
T |
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| Q |
105 |
ttacgttagaatttgattagcctatatataattatgcacaaagaatatctaattaacactacaaaaaagtgttaccgatgtgctatactatgcctatgtt |
204 |
Q |
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| T |
3155741 |
ttacgttagaatttgattagcctatatataattatgcacaaagaatatctaattaacactacaaaaaagtgttaccgatgtgctatactatgcctatgtt |
3155840 |
T |
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| Q |
205 |
aatctggacatccttctaataatgcaatgcataaact |
241 |
Q |
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| T |
3155841 |
aatctggacatccttctaataatgcaatgcataaact |
3155877 |
T |
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