View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11766_low_15 (Length: 311)
Name: NF11766_low_15
Description: NF11766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11766_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 52238043 - 52238323
Alignment:
| Q |
17 |
cagagaatatcatgaattgattttacctttggactggactaccaaatcttaaagctctatagtttggtttataagttaaggaagaagaatgccaaaactt |
116 |
Q |
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| T |
52238043 |
cagagaatatcatgaattgattttacctttggactggactaccaaatcttaaagctctatagtttggtttacaagttaaggaagaagaatgccaaaactt |
52238142 |
T |
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| Q |
117 |
gaaacatatacccagattgacaatagctaaacatgtttcttcttcataactcaaaaattaaatgcactattatccatttggaacaaaaacacttgaatga |
216 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
52238143 |
gaaacatatacctagattgacaatagctaaacatgtttcttcttcataactcaaaaatcaaatgcactattatccatttggaacaaaaacacttgaatga |
52238242 |
T |
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| Q |
217 |
tccagatcaattgcatcctatactttgtctcataccaaatatgcagatatgtatgtacaaaagtatagtttagtgatattt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52238243 |
tccagatcaattgcatcctatactttgtctcataccaaatatgcagatatgtatgtacaaaagtatagtttagtgatattt |
52238323 |
T |
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