View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11766_low_7 (Length: 520)

Name: NF11766_low_7
Description: NF11766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11766_low_7
NF11766_low_7
[»] chr5 (50 HSPs)
chr5 (80-267)||(42224585-42224774)
chr5 (80-258)||(13456170-13456346)
chr5 (80-267)||(4959275-4959464)
chr5 (120-267)||(24915094-24915239)
chr5 (120-267)||(24990925-24991070)
chr5 (92-267)||(26072112-26072289)
chr5 (80-267)||(40971447-40971636)
chr5 (81-267)||(6263881-6264067)
chr5 (120-267)||(17568696-17568843)
chr5 (109-264)||(32050335-32050490)
chr5 (120-263)||(34818225-34818368)
chr5 (120-267)||(8912549-8912698)
chr5 (195-267)||(40971564-40971636)
chr5 (195-267)||(42224702-42224774)
chr5 (84-219)||(31542284-31542422)
chr5 (120-267)||(34368399-34368545)
chr5 (80-263)||(28611777-28611961)
chr5 (120-189)||(5413809-5413878)
chr5 (195-267)||(4959275-4959347)
chr5 (83-226)||(10142012-10142154)
chr5 (81-155)||(13456162-13456236)
chr5 (80-150)||(24915169-24915239)
chr5 (80-150)||(24991000-24991070)
chr5 (83-158)||(32050413-32050490)
chr5 (80-150)||(42224585-42224657)
chr5 (92-180)||(10253163-10253251)
chr5 (80-149)||(26072218-26072289)
chr5 (80-152)||(8912622-8912698)
chr5 (120-255)||(27592459-27592593)
chr5 (124-257)||(41105575-41105707)
chr5 (198-266)||(6263881-6263949)
chr5 (109-257)||(28490727-28490874)
chr5 (80-151)||(4959391-4959464)
chr5 (109-163)||(25710570-25710624)
chr5 (198-247)||(17568816-17568865)
chr5 (120-189)||(30325946-30326015)
chr5 (211-267)||(2443683-2443739)
chr5 (109-173)||(17537190-17537254)
chr5 (124-179)||(32401160-32401215)
chr5 (120-179)||(34384773-34384832)
chr5 (120-223)||(43405432-43405534)
chr5 (152-226)||(27726833-27726907)
chr5 (80-150)||(6263995-6264067)
chr5 (140-189)||(10666760-10666809)
chr5 (195-267)||(13456276-13456346)
chr5 (80-150)||(17568696-17568768)
chr5 (80-174)||(39246605-39246701)
chr5 (211-263)||(8912511-8912563)
chr5 (195-255)||(26072112-26072172)
chr5 (80-116)||(34368509-34368545)
[»] chr1 (64 HSPs)
chr1 (80-267)||(11135736-11135925)
chr1 (80-273)||(11430438-11430632)
chr1 (80-273)||(32848571-32848766)
chr1 (79-267)||(41095603-41095793)
chr1 (120-267)||(14093995-14094142)
chr1 (83-227)||(41917995-41918141)
chr1 (80-263)||(50773109-50773294)
chr1 (120-268)||(13388330-13388480)
chr1 (120-236)||(24436492-24436608)
chr1 (80-205)||(44739115-44739242)
chr1 (120-267)||(28109907-28110053)
chr1 (80-179)||(43851117-43851218)
chr1 (89-208)||(4578629-4578749)
chr1 (98-258)||(50424869-50425029)
chr1 (122-267)||(29418522-29418668)
chr1 (369-505)||(1843601-1843738)
chr1 (369-505)||(1869210-1869347)
chr1 (109-258)||(13114673-13114822)
chr1 (195-267)||(11135736-11135808)
chr1 (140-267)||(30678906-30679032)
chr1 (120-253)||(15660932-15661063)
chr1 (195-268)||(41095720-41095793)
chr1 (195-264)||(41917995-41918064)
chr1 (195-267)||(11430438-11430510)
chr1 (195-267)||(44739115-44739187)
chr1 (369-500)||(1857617-1857748)
chr1 (160-267)||(43832348-43832455)
chr1 (122-200)||(5848086-5848164)
chr1 (120-189)||(15523249-15523318)
chr1 (120-189)||(15531243-15531312)
chr1 (195-267)||(9165299-9165371)
chr1 (195-267)||(32848694-32848766)
chr1 (120-179)||(9165341-9165400)
chr1 (80-174)||(2225223-2225317)
chr1 (80-150)||(11135853-11135925)
chr1 (120-189)||(22540407-22540476)
chr1 (120-263)||(41948145-41948287)
chr1 (120-179)||(50539163-50539222)
chr1 (197-247)||(28109885-28109935)
chr1 (120-189)||(19101673-19101742)
chr1 (109-258)||(26980266-26980414)
chr1 (80-150)||(41095603-41095675)
chr1 (80-189)||(41958082-41958191)
chr1 (195-267)||(43851146-43851218)
chr1 (122-189)||(28218120-28218187)
chr1 (193-258)||(4578686-4578749)
chr1 (80-179)||(6133706-6133807)
chr1 (138-276)||(8899071-8899208)
chr1 (79-150)||(13388330-13388403)
chr1 (120-178)||(50308830-50308888)
chr1 (80-150)||(11430555-11430626)
chr1 (101-186)||(24911483-24911568)
chr1 (195-267)||(14094112-14094184)
chr1 (80-164)||(25543337-25543423)
chr1 (80-179)||(931371-931472)
chr1 (120-258)||(32211788-32211925)
chr1 (198-267)||(6133738-6133807)
chr1 (181-226)||(8665251-8665296)
chr1 (84-189)||(10659840-10659948)
chr1 (156-221)||(14562604-14562669)
chr1 (109-170)||(18157066-18157127)
chr1 (128-189)||(36566943-36567004)
chr1 (80-162)||(39019572-39019650)
chr1 (195-227)||(13388450-13388482)
[»] chr6 (32 HSPs)
chr6 (80-267)||(19090209-19090398)
chr6 (80-267)||(10060856-10061045)
chr6 (89-264)||(35128724-35128897)
chr6 (80-258)||(6531305-6531481)
chr6 (109-265)||(19737431-19737587)
chr6 (109-263)||(4595770-4595922)
chr6 (80-226)||(373396-373544)
chr6 (109-258)||(34905364-34905512)
chr6 (149-227)||(6992305-6992383)
chr6 (195-267)||(6531409-6531481)
chr6 (195-267)||(19090326-19090398)
chr6 (137-264)||(12794811-12794938)
chr6 (195-258)||(35128834-35128897)
chr6 (80-150)||(10060973-10061045)
chr6 (80-150)||(19090209-19090281)
chr6 (120-189)||(21987331-21987400)
chr6 (177-233)||(9940389-9940445)
chr6 (109-189)||(10133230-10133310)
chr6 (120-179)||(445857-445916)
chr6 (195-238)||(4595768-4595811)
chr6 (82-150)||(19737431-19737501)
chr6 (195-254)||(19737546-19737605)
chr6 (120-189)||(5106337-5106406)
chr6 (91-189)||(31116196-31116296)
chr6 (195-267)||(373396-373468)
chr6 (195-267)||(10060856-10060928)
chr6 (138-189)||(16436122-16436172)
chr6 (123-225)||(32598985-32599086)
chr6 (195-267)||(445815-445887)
chr6 (110-150)||(9940387-9940427)
chr6 (195-263)||(34905337-34905405)
chr6 (83-150)||(35128724-35128789)
[»] chr3 (65 HSPs)
chr3 (80-267)||(37600124-37600313)
chr3 (80-271)||(10769715-10769908)
chr3 (84-269)||(54140885-54141072)
chr3 (84-258)||(24748913-24749089)
chr3 (86-217)||(46237090-46237223)
chr3 (82-264)||(38928006-38928190)
chr3 (80-267)||(27243042-27243231)
chr3 (158-267)||(29775136-29775243)
chr3 (111-251)||(357790-357928)
chr3 (84-267)||(13809083-13809267)
chr3 (90-219)||(50661564-50661695)
chr3 (120-257)||(43657000-43657137)
chr3 (80-189)||(55452087-55452196)
chr3 (120-263)||(24734744-24734886)
chr3 (120-263)||(41451894-41452036)
chr3 (80-179)||(21232604-21232705)
chr3 (80-189)||(46160946-46161055)
chr3 (195-267)||(37600241-37600313)
chr3 (80-255)||(28529250-28529424)
chr3 (80-255)||(20493452-20493628)
chr3 (80-189)||(46450064-46450174)
chr3 (195-267)||(21232633-21232705)
chr3 (195-258)||(46237157-46237220)
chr3 (120-258)||(20791335-20791472)
chr3 (120-205)||(46575987-46576072)
chr3 (78-179)||(5452142-5452245)
chr3 (195-267)||(10769836-10769908)
chr3 (195-267)||(28529250-28529322)
chr3 (195-255)||(54141004-54141064)
chr3 (120-263)||(37776702-37776844)
chr3 (140-263)||(44844040-44844163)
chr3 (80-146)||(29775136-29775202)
chr3 (80-263)||(52123955-52124139)
chr3 (120-189)||(14236058-14236127)
chr3 (120-189)||(18427222-18427291)
chr3 (89-150)||(24748913-24748976)
chr3 (109-189)||(26310518-26310598)
chr3 (83-179)||(30624633-30624729)
chr3 (195-267)||(37776814-37776886)
chr3 (84-184)||(40715939-40716041)
chr3 (78-150)||(54140885-54140959)
chr3 (197-267)||(27243042-27243112)
chr3 (83-150)||(38928006-38928075)
chr3 (198-267)||(46160946-46161013)
chr3 (80-150)||(37600124-37600196)
chr3 (195-267)||(20493556-20493628)
chr3 (125-249)||(29588746-29588869)
chr3 (150-189)||(752461-752500)
chr3 (138-189)||(36750993-36751044)
chr3 (195-233)||(138794-138832)
chr3 (195-233)||(357791-357829)
chr3 (96-150)||(357874-357928)
chr3 (195-269)||(5452171-5452245)
chr3 (195-269)||(29389124-29389198)
chr3 (195-264)||(30624633-30624700)
chr3 (195-265)||(38928120-38928190)
chr3 (199-269)||(52951475-52951545)
chr3 (110-179)||(8825061-8825130)
chr3 (78-164)||(29389110-29389198)
chr3 (195-244)||(43657107-43657156)
chr3 (211-267)||(46450064-46450118)
chr3 (109-190)||(48351464-48351545)
chr3 (121-189)||(2009035-2009102)
chr3 (94-186)||(40702197-40702289)
chr3 (195-263)||(40715973-40716041)
[»] chr2 (71 HSPs)
chr2 (83-267)||(42182889-42183075)
chr2 (80-266)||(1110195-1110383)
chr2 (80-264)||(28898034-28898220)
chr2 (80-267)||(15508911-15509100)
chr2 (84-255)||(37228499-37228673)
chr2 (80-263)||(4964671-4964856)
chr2 (80-238)||(31395468-31395628)
chr2 (149-267)||(37719831-37719949)
chr2 (84-256)||(24895272-24895444)
chr2 (84-166)||(1107039-1107123)
chr2 (80-267)||(6315667-6315844)
chr2 (195-264)||(42182889-42182958)
chr2 (195-267)||(28898148-28898220)
chr2 (83-267)||(37398808-37398994)
chr2 (182-267)||(20951603-20951686)
chr2 (80-258)||(12989188-12989367)
chr2 (182-263)||(27968919-27969000)
chr2 (182-263)||(28091587-28091668)
chr2 (182-263)||(28101819-28101900)
chr2 (195-263)||(1107039-1107107)
chr2 (195-267)||(1110195-1110267)
chr2 (195-267)||(15508911-15508983)
chr2 (195-267)||(31395556-31395628)
chr2 (121-227)||(33746954-33747059)
chr2 (108-189)||(9470108-9470189)
chr2 (195-267)||(4964784-4964856)
chr2 (203-263)||(37228499-37228559)
chr2 (109-256)||(6980126-6980272)
chr2 (80-179)||(18511291-18511392)
chr2 (80-150)||(20951603-20951673)
chr2 (80-263)||(26767760-26767944)
chr2 (140-226)||(38104307-38104393)
chr2 (80-169)||(17188064-17188153)
chr2 (83-164)||(45554567-45554650)
chr2 (135-222)||(21447158-21447245)
chr2 (112-263)||(35316400-35316550)
chr2 (112-258)||(2122826-2122971)
chr2 (109-267)||(44274262-44274419)
chr2 (80-150)||(15509028-15509100)
chr2 (195-264)||(45554567-45554636)
chr2 (140-255)||(25238284-25238399)
chr2 (109-172)||(10339794-10339857)
chr2 (84-143)||(27968919-27968980)
chr2 (84-143)||(28091607-28091668)
chr2 (84-143)||(28101839-28101900)
chr2 (83-150)||(28898034-28898103)
chr2 (91-189)||(8009521-8009621)
chr2 (83-188)||(19427320-19427425)
chr2 (89-170)||(31494214-31494295)
chr2 (147-255)||(36093993-36094098)
chr2 (80-150)||(37719831-37719903)
chr2 (120-164)||(41805873-41805917)
chr2 (195-267)||(41805887-41805959)
chr2 (78-109)||(29806201-29806232)
chr2 (198-264)||(37398928-37398994)
chr2 (198-267)||(11539420-11539489)
chr2 (124-189)||(32701513-32701578)
chr2 (92-150)||(37228613-37228673)
chr2 (198-267)||(40535104-40535173)
chr2 (80-150)||(42183003-42183075)
chr2 (89-150)||(1110312-1110375)
chr2 (122-173)||(3804625-3804677)
chr2 (199-263)||(6980235-6980299)
chr2 (145-189)||(10981582-10981626)
chr2 (195-267)||(12989188-12989260)
chr2 (195-267)||(18511320-18511392)
chr2 (120-188)||(19953434-19953502)
chr2 (122-154)||(25666700-25666732)
chr2 (195-267)||(26767872-26767944)
chr2 (237-269)||(29806200-29806232)
chr2 (138-258)||(38464220-38464339)
[»] chr7 (69 HSPs)
chr7 (84-267)||(13919781-13919966)
chr7 (80-265)||(26703436-26703621)
chr7 (83-263)||(25428477-25428659)
chr7 (122-267)||(19840879-19841024)
chr7 (81-258)||(45909453-45909633)
chr7 (80-227)||(17354561-17354710)
chr7 (81-226)||(19494374-19494521)
chr7 (120-267)||(14759682-14759829)
chr7 (81-233)||(22786149-22786303)
chr7 (80-267)||(27888279-27888467)
chr7 (109-258)||(24539126-24539275)
chr7 (140-255)||(26189962-26190077)
chr7 (109-258)||(17749722-17749871)
chr7 (182-273)||(37549615-37549706)
chr7 (80-186)||(32205076-32205181)
chr7 (80-189)||(33008101-33008212)
chr7 (195-266)||(19494450-19494521)
chr7 (195-266)||(22786149-22786220)
chr7 (109-255)||(22189967-22190112)
chr7 (145-217)||(31959860-31959933)
chr7 (89-224)||(46067943-46068079)
chr7 (195-263)||(13919781-13919849)
chr7 (83-248)||(14795131-14795297)
chr7 (83-248)||(15242123-15242289)
chr7 (156-238)||(26459068-26459150)
chr7 (80-150)||(13919894-13919966)
chr7 (154-219)||(21963172-21963237)
chr7 (195-264)||(25428590-25428659)
chr7 (195-267)||(26703551-26703621)
chr7 (91-253)||(47821990-47822154)
chr7 (120-188)||(7775039-7775107)
chr7 (120-164)||(8073385-8073429)
chr7 (80-221)||(10619433-10619574)
chr7 (84-189)||(11824072-11824179)
chr7 (195-267)||(17354638-17354710)
chr7 (80-189)||(31502536-31502647)
chr7 (195-267)||(33008101-33008173)
chr7 (82-190)||(48374510-48374618)
chr7 (83-159)||(19422936-19423014)
chr7 (84-255)||(34280926-34281096)
chr7 (80-147)||(19840879-19840948)
chr7 (196-258)||(23934021-23934083)
chr7 (122-189)||(11692220-11692287)
chr7 (123-170)||(12271028-12271075)
chr7 (82-150)||(26703436-26703506)
chr7 (195-272)||(32205071-32205145)
chr7 (109-263)||(6442193-6442346)
chr7 (198-247)||(14759660-14759709)
chr7 (109-189)||(12263508-12263588)
chr7 (195-267)||(22189936-22190008)
chr7 (195-255)||(31959968-31960028)
chr7 (195-266)||(45909453-45909525)
chr7 (89-150)||(45909570-45909633)
chr7 (138-258)||(46994366-46994486)
chr7 (109-188)||(41873462-41873541)
chr7 (120-207)||(42887683-42887769)
chr7 (83-189)||(46517293-46517399)
chr7 (214-267)||(6580135-6580188)
chr7 (198-267)||(10619506-10619574)
chr7 (80-150)||(14759757-14759829)
chr7 (195-264)||(19422945-19423014)
chr7 (84-150)||(25428477-25428545)
chr7 (80-150)||(37549621-37549693)
chr7 (196-249)||(42887740-42887793)
chr7 (199-267)||(2520630-2520698)
chr7 (195-263)||(11824072-11824140)
chr7 (195-267)||(27888279-27888351)
chr7 (80-116)||(27888431-27888467)
chr7 (199-267)||(31502579-31502647)
[»] chr4 (65 HSPs)
chr4 (80-267)||(13069938-13070126)
chr4 (80-267)||(44832460-44832649)
chr4 (80-267)||(42862415-42862604)
chr4 (84-264)||(37315564-37315743)
chr4 (120-258)||(51206082-51206220)
chr4 (84-264)||(2187811-2187992)
chr4 (89-224)||(16178590-16178726)
chr4 (84-263)||(39016664-39016845)
chr4 (88-226)||(2088700-2088840)
chr4 (120-263)||(30866930-30867073)
chr4 (83-263)||(43771126-43771307)
chr4 (89-251)||(25719123-25719285)
chr4 (81-264)||(47237734-47237923)
chr4 (123-258)||(19447173-19447308)
chr4 (78-189)||(20225413-20225524)
chr4 (120-221)||(41278658-41278759)
chr4 (195-267)||(42862532-42862604)
chr4 (109-263)||(8108984-8109137)
chr4 (109-255)||(722185-722330)
chr4 (80-223)||(40812034-40812179)
chr4 (198-267)||(40812034-40812103)
chr4 (195-263)||(8108957-8109025)
chr4 (195-267)||(13069938-13070009)
chr4 (89-150)||(51206157-51206220)
chr4 (195-258)||(2088776-2088839)
chr4 (195-258)||(16178590-16178652)
chr4 (120-263)||(24938414-24938556)
chr4 (109-258)||(20454568-20454714)
chr4 (145-258)||(5545642-5545755)
chr4 (109-258)||(21776848-21776997)
chr4 (80-258)||(40991593-40991772)
chr4 (195-264)||(43771126-43771195)
chr4 (120-256)||(754586-754721)
chr4 (109-189)||(41153270-41153350)
chr4 (80-153)||(42862415-42862490)
chr4 (198-266)||(47237855-47237923)
chr4 (84-179)||(46242026-46242121)
chr4 (197-263)||(2187926-2187992)
chr4 (195-263)||(37315564-37315629)
chr4 (83-150)||(37315674-37315743)
chr4 (152-226)||(49738959-49739033)
chr4 (210-270)||(20225467-20225525)
chr4 (80-150)||(44832577-44832649)
chr4 (120-189)||(52671869-52671938)
chr4 (120-180)||(22592343-22592403)
chr4 (120-180)||(29699528-29699588)
chr4 (125-189)||(35179653-35179716)
chr4 (124-268)||(39471200-39471343)
chr4 (89-258)||(48339344-48339514)
chr4 (80-189)||(50571861-50571972)
chr4 (128-267)||(24834625-24834763)
chr4 (109-188)||(34129473-34129552)
chr4 (128-254)||(19484532-19484657)
chr4 (120-189)||(38636376-38636445)
chr4 (84-150)||(39016777-39016845)
chr4 (198-267)||(40991703-40991772)
chr4 (80-166)||(48608077-48608165)
chr4 (140-189)||(49077308-49077357)
chr4 (120-189)||(50481617-50481686)
chr4 (138-222)||(28304055-28304139)
chr4 (195-267)||(34129511-34129583)
chr4 (195-267)||(44832460-44832532)
chr4 (122-166)||(49682886-49682930)
chr4 (109-189)||(50164423-50164503)
chr4 (195-267)||(50571861-50571933)
[»] chr8 (47 HSPs)
chr8 (93-252)||(35689490-35689651)
chr8 (89-256)||(1205833-1206002)
chr8 (80-258)||(7599425-7599605)
chr8 (80-238)||(33417680-33417839)
chr8 (84-267)||(6387564-6387747)
chr8 (108-263)||(28211885-28212039)
chr8 (80-267)||(13407318-13407507)
chr8 (89-202)||(43026299-43026412)
chr8 (137-267)||(34303432-34303562)
chr8 (84-267)||(23142812-23143002)
chr8 (109-189)||(32072125-32072205)
chr8 (80-255)||(24055932-24056108)
chr8 (80-174)||(8914768-8914864)
chr8 (80-179)||(34861269-34861368)
chr8 (109-263)||(1977172-1977325)
chr8 (156-258)||(12212128-12212230)
chr8 (156-258)||(12456556-12456658)
chr8 (120-189)||(23685170-23685239)
chr8 (140-225)||(25915088-25915175)
chr8 (195-263)||(35689481-35689549)
chr8 (120-226)||(16441842-16441948)
chr8 (80-174)||(43506535-43506628)
chr8 (120-217)||(10197762-10197859)
chr8 (112-217)||(11310410-11310515)
chr8 (195-267)||(7599533-7599605)
chr8 (211-258)||(1205833-1205880)
chr8 (120-179)||(31301154-31301213)
chr8 (123-188)||(5979922-5979987)
chr8 (83-189)||(8903852-8903960)
chr8 (124-189)||(9192044-9192109)
chr8 (124-189)||(35151801-35151866)
chr8 (120-189)||(45246473-45246542)
chr8 (152-224)||(902410-902482)
chr8 (109-189)||(9952829-9952909)
chr8 (122-189)||(35797436-35797503)
chr8 (121-179)||(28413951-28414009)
chr8 (80-170)||(45218608-45218698)
chr8 (210-267)||(8914768-8914825)
chr8 (80-117)||(23142812-23142849)
chr8 (198-263)||(23142937-23143002)
chr8 (193-226)||(44709309-44709342)
chr8 (195-267)||(1977284-1977356)
chr8 (195-255)||(11310477-11310537)
chr8 (109-189)||(17499305-17499385)
chr8 (195-267)||(31301112-31301184)
chr8 (195-263)||(32072098-32072166)
chr8 (109-157)||(44709299-44709347)
[»] scaffold0099 (1 HSPs)
scaffold0099 (126-233)||(27358-27467)
[»] scaffold0054 (1 HSPs)
scaffold0054 (120-267)||(30907-31054)
[»] scaffold0018 (1 HSPs)
scaffold0018 (120-258)||(27851-27988)
[»] scaffold0543 (1 HSPs)
scaffold0543 (109-189)||(9692-9772)
[»] scaffold0492 (1 HSPs)
scaffold0492 (109-189)||(11238-11318)
[»] scaffold0155 (1 HSPs)
scaffold0155 (120-178)||(35633-35691)
[»] scaffold0147 (1 HSPs)
scaffold0147 (120-222)||(28335-28437)
[»] scaffold0838 (1 HSPs)
scaffold0838 (110-170)||(2251-2311)
[»] scaffold0832 (1 HSPs)
scaffold0832 (110-170)||(2282-2342)
[»] scaffold0194 (1 HSPs)
scaffold0194 (124-168)||(8508-8552)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 42224774 - 42224585
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||||||||||||  ||||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42224675  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||||| |||||||||||||||||| ||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||    
T  42224674 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctc 42224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 13456346 - 13456170
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||| ||||| |||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  13456346 gaggaatgctagcagcactttcttttgagcactctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattt 13456247  T
Q  180 ctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
      |||||||| | ||||||||||||||||  ||||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  13456246 tcaaagtgtaggacctacattgatttcacctaataaaagagtgagtgctagag--agtactcaaaagagagtgttgcta 13456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 4959275 - 4959464
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||||||||||||  ||||||||  || ||||||||||| |||||||||||||||||||| || || |||||||||||| |||    
T  4959275 gaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgtatgtctcatcattttatgtgggttacat 4959374  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||  |||||||| ||  |||||||||||| | |||||||||||||||||| ||||| |||||||||||||||||||| ||| || |||||    
T  4959375 tttcaaagtgtaggtgatacattgatttcccccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcctc 4959464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 24915094 - 24915239
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24915094 actcgctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaaaga 24915193  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||| ||||  |||||| |||||||||||||||||  |||||||    
T  24915194 gtgagtgctagag--agtgcttaaaagagagtgttgctagtattcctc 24915239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 24990925 - 24991070
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24990925 actcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaaga 24991024  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||| ||||  |||||| |||||||||||||||||  |||||||    
T  24991025 gtgagtgctagag--agtgcttaaaagagagtgttgctagtattcctc 24991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 92 - 267
Target Start/End: Original strand, 26072112 - 26072289
Alignment:
Q  92 caacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||||||||| ||||  |||  ||||| |||||| | |||||||||||||||||||| |||||||||||||||  | |||||| ||||||||    
T  26072112 caacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgtatgtctcaccactttatgtggaattcatttccaaagtgta 26072211  T
Q  190 tgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
     |||| |||||| |||||| |||||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||    
T  26072212 ggtcccacattgttttcacccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctc 26072289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 40971636 - 40971447
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || ||||||||||||||||||  ||||||||  |||||||||||||| | ||||||||||||||||||||||||||||||||  ||| |||    
T  40971636 gaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttcat 40971537  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||||| ||| ||||||||||| || |||||||| ||||||||  ||| | |||| ||||||||||||||||||| || |||||    
T  40971536 ttccaaagtgtaggtcttacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagcactcctc 40971447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 6263881 - 6264067
Alignment:
Q  81 aggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||||||| |||||||||||||||||  ||||||||| |||||||| ||||| |||| |||||||| |||||||||||||||||||  ||||||| |    
T  6263881 aggaatgttagtaacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccactttatg--ggttccagt 6263978  T
Q  179 tctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    || |||||||   || |||||||||||||| || ||||||||||||||| ||| | |||||| ||||||||||||||||| || |||||    
T  6263979 tccaaagtgttgatcttacattgatttcacccactaaaagagtgagtgctagatagagtgcttaaaagagagtgttgctagcactcctc 6264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 120 - 267
Target Start/End: Complemental strand, 17568843 - 17568696
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| || ||||| ||||| |||||||| |||||||||| ||||||  ||||||||||    
T  17568843 actcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttcatccaataaaaga 17568744  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||| || || |||||||||||||||||||||||| ||||||||    
T  17568743 gtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 17568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 109 - 264
Target Start/End: Original strand, 32050335 - 32050490
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  | ||| |||||||| ||||||||| ||| |||||| || |||||||||||||||||||||  |||||||    | ||||||||||||||    
T  32050335 ctctctctagcattcattcttttattgggtgaaattaatatatgtctcatcactttatgtgggttccattttcaaagtgtggaacatacattgatttcac 32050434  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
     |||||||| ||||||||| ||||| | |||||||||||||||||||||| |||||    
T  32050435 ccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcattc 32050490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 34818225 - 34818368
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||||||||||   || ||||||||||||||  |||| |||||||||||||||||||||||||| || ||||||||||||||| ||  ||||||| |    
T  34818225 actcactcttttattaagtaaaatcaatgtatgtgtcaccgctttatgtgggttccatttctaaagtataggtcctacattgattttaccaaataaaaaa 34818324  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||  ||||| ||||||||||||||| |||| ||| ||||    
T  34818325 gtgagtgttagagagagtgctcaaaagagaatgttcctagcatt 34818368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 8912549 - 8912698
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||||||||||  ||| |||| ||| |||||||| ||||||| |||||||| |||||| |||||||||||| || |||||||||||  |||||||||    
T  8912549 actcactcttttatttggtaaaattaatatatgtccctccactttctgtgggtttcatttccaaagtgtatgtcatatattgatttcacctaataaaaga 8912648  T
Q  220 gtgagtgcaagagaaa--gtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||  ||||| |  |||||||||||||| |||||||| ||||||||    
T  8912649 gtgagtgatagagagagtgtgctcaaaagagactgttgctaacattcctc 8912698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 40971564 - 40971636
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||    
T  40971564 tacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctc 40971636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 42224702 - 42224774
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  42224702 tacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 42224774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 31542422 - 31542284
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttcca-tttc 180  Q
    |||| |||||| ||| ||||||||||  ||||||||  ||||| |  ||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||    
T  31542422 aatgctagcaaaactatcttttgagcactctctctaacactcatttatttattgggtgaaattaatgtacgtcccatcactttatgtggattccattttc 31542323  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||| |||  |||||||| ||||||||| ||||||||||    
T  31542322 taaaatgtgggtcctacagtgatttcacccaataaaaga 31542284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 34368399 - 34368545
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||||||| || || | ||| |||||||||| |||||||||| |||||||||  |||  |||||||| | || ||| |||||| |  |||||| |||    
T  34368399 actcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgta-gacccacaatgatttaaaccaataagaga 34368497  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||  ||||| |||||||||||||||||||||||| ||||||||    
T  34368498 gtgggtgacagagagagtgctcaaaagagagtgttgctagcattcctc 34368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 28611961 - 28611777
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || |||||||| ||||||||| |||||| | ||  ||||||||| || || |  || || ||||||||||| |||||| | || |||||||    
T  28611961 gaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccat 28611862  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    || ||||||||| | |  ||| |||||| | |||||||||||||  |||  ||||| |||||||||||||||||||||||| ||||    
T  28611861 ttttaaagtgta-gacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatt 28611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 5413878 - 5413809
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||  ||||||||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgta 5413809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 4959347 - 4959275
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||||||||| ||   ||||| |||||||||||||||||||||||| ||||||||    
T  4959347 tacattgatttcacccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgctagcattcctc 4959275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 10142154 - 10142012
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttcta 182  Q
    ||||| |||||||||||  |||| | | |||| ||  |||||||||||||| || | ||||||||||||||||||||||||| ||| ||||||||||  |    
T  10142154 gaatgctagcaacactcatttttcaacactctatagcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttca 10142055  T
Q  183 aagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    ||||||| | || ||| | |||| | ||||||| ||||||||||    
T  10142054 aagtgta-gaccaacaattatttaaatcaataagagagtgagtg 10142012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 13456162 - 13456236
Alignment:
Q  81 aggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcc 155  Q
    |||| |||||||||||||||||||||||  |||||||  ||||||||||||||  ||||||||||||||| ||||    
T  13456162 aggagtgttagcaacactctcttttgagtactctctagcactcactcttttattaggtgaaatcaatgtaggtcc 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 24915239 - 24915169
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||  ||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||    
T  24915239 gaggaatactagcaacactctcttttaagcactctctagcactcactcttttattgggtgaaatcaatgta 24915169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 24991070 - 24991000
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||  ||||||||||||||||| ||| |||||||  |||||||||||||| ||||||||||||||||    
T  24991070 gaggaatactagcaacactctcttttaagcactctctagcactcactcttttattgggtgaaatcaatgta 24991000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 32050490 - 32050413
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccac 158  Q
    ||||| |||||||||||||||||||||  ||||||||  ||||||| |||||| ||||||||||||||||||| ||||    
T  32050490 gaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 42224585 - 42224657
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  ||||||| |  |||||||||||||| ||||||||||||||||    
T  42224585 gaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgta 42224657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 10253251 - 10253163
Alignment:
Q  92 caacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||   |||||||  |||||||||| ||| || |||||| ||||||||||||||||||||||||| |||| |||||    
T  10253251 caacattctcttttgaatactctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctatttc 10253163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 26072289 - 26072218
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgt 149  Q
    |||||||| |||||||||||||||||||||  ||||||||  |||||||||||||| |||||||| ||||||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 8912698 - 8912622
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc----tctctctatgactcactcttttatcgggtgaaatcaatgtatg 152  Q
    ||||||||||||||||| ||||||||||||    ||||||||| ||||||||||||||  |||||||||||| ||||    
T  8912698 gaggaatgttagcaacagtctcttttgagcacactctctctatcactcactcttttattaggtgaaatcaatatatg 8912622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 27592593 - 27592459
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| || ||||||||||||||||| |||||||||||| | |||| ||||| |||||||| |  || || |||||| |  |||||| |||    
T  27592593 actcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgta-gatctgcaatgatttaaaccaataagaga 27592495  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||| || || |||| |||  ||||||||||||||||    
T  27592494 gtgggtacaggagagagtattcaaaagagagtgttg 27592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 41105707 - 41105575
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtga 223  Q
    |||||||||| || ||||||||| | ||||||||| ||||| ||||||||| ||||  |||||| ||  || ||| |||||| |  |||||| |||| ||    
T  41105707 actcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcataccc-acagtgatttaaaccaataagagagcga 41105609  T
Q  224 gtgcaagagaaagtgctcaaaagagagtgttgct 257  Q
    ||   ||||| |||||||||||||||||||||||    
T  41105608 gtattagagagagtgctcaaaagagagtgttgct 41105575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 6263949 - 6263881
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    |||||||| || ||||||| |||||||||  ||||| |||||||||||||||||||| ||| |||||||    
T  6263949 attgattttacccaataaaggagtgagtgatagagagagtgctcaaaagagagtgttactaacattcct 6263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 28490874 - 28490727
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  | ||||| |||||| || ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| | || ||| | |||| |     
T  28490874 ctctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgta-gacccacaataatttaaa 28490776  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgct 257  Q
     |||||| |||||||||   ||||| |||| ||||||||||||||||||    
T  28490775 ccaataagagagtgagtattagagagagtgttcaaaagagagtgttgct 28490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 4959464 - 4959391
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtat 151  Q
    ||||| || ||| |||||||||||||||||  ||||||||  |||||||||||||| ||| |||||||||||||    
T  4959464 gaggagtgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 25710624 - 25710570
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactt 163  Q
    |||||| ||| |||||||||||||| | ||||||||||||||||||| |||||||    
T  25710624 ctctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccactt 25710570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 17568816 - 17568865
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 247  Q
    |||||||||||||||||||||||||||||| || || ||| |||||||||    
T  17568816 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaaga 17568865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 30326015 - 30325946
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || ||||||||||||||||| |||||||||||| | |||| || || ||||||||    
T  30326015 actcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgta 30325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 2443739 - 2443683
Alignment:
Q  211 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||| |||| | ||| | |||||||||||||||||||||||| ||||||||    
T  2443739 aataaaagagcgagttctagacagagtgctcaaaagagagtgttgctagcattcctc 2443683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 17537254 - 17537190
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggtt 173  Q
    |||||||||| ||||||||||||||  | | ||||||||||||||||||||| ||| ||| ||||    
T  17537254 ctctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtt 17537190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 32401160 - 32401215
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||| |||| | ||||||| ||||||| | |||||||||||||||||||||||||    
T  32401160 actctcttattgagtgaaattaatgtatattccaccactttatgtgggttccattt 32401215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 34384832 - 34384773
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||| |||||||| |||||||||||||||||||||||| | ||| |||| |||| ||||    
T  34384832 actcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattt 34384773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 43405432 - 43405534
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| |  ||||||||||||||||| ||||||||| | |  |||| ||||| |||||||| | || ||| |||||| | ||||||| |||    
T  43405432 actcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgta-gacccacaatgatttaaatcaataagaga 43405530  T
Q  220 gtga 223  Q
    ||||    
T  43405531 gtga 43405534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 27726907 - 27726833
Alignment:
Q  152 gtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    |||| ||||||||  |||||  ||||||| |||||||| | || ||||| ||||||| |||||||||||||||||    
T  27726907 gtccaaccactttgagtgggacccatttccaaagtgtaggacccacattaatttcacccaataaaagagtgagtg 27726833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 6264067 - 6263995
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||| || ||||||||||||||||| ||| ||||  |||  |||||||||||||  ||||||||||||||||    
T  6264067 gaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgta 6263995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 10666809 - 10666760
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||| ||||| ||| ||||||||||||||||||||||| |||| ||||    
T  10666809 aaatcattgtatatcctaccactttatgtgggttccatttttaaattgta 10666760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 13456276 - 13456346
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  | ||||||||||||||  || ||| ||||||||||||| |||| ||||| ||||||||    
T  13456276 tacattgatttcatccgataaaagagtgagt--aatagagagtgctcaaaagaaagtgctgctagcattcctc 13456346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 17568696 - 17568768
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  ||||| |||  || ||||||||||| || |||||| ||||||    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 39246605 - 39246701
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagct--ctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttc 174  Q
    |||||||| |||||||| || |||||||||   |||||||  | ||||| | |||| || | ||||||||||||||||||||||||| |||| ||||    
T  39246605 gaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttc 39246701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 8912563 - 8912511
Alignment:
Q  211 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||||||||||||| ||| |||||| | ||||||||| ||||||| ||||    
T  8912563 aataaaagagtgagtgctagaaaaagtgtttaaaagagagcgttgctagcatt 8912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 26072172 - 26072112
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    |||||||||||||| ||| |||||| |||||   ||| | |||||||||||||||||||||    
T  26072172 tacattgatttcacccaaaaaaagaatgagtattagaaagagtgctcaaaagagagtgttg 26072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 34368545 - 34368509
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctct 116  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  34368545 gaggaatgctagcaacactctcttttgagcactctct 34368509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 11135736 - 11135925
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||||||||||||  ||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11135835  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||    
T  11135836 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcatccctc 11135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 80 - 273
Target Start/End: Original strand, 11430438 - 11430632
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || |||||||||||||||||| ||||  |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11430537  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttatc 273  Q
    ||| |||||||| |||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||    
T  11430538 ttccaaagtgtaggtcctacattgaattcac-caataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctctttatc 11430632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 80 - 273
Target Start/End: Complemental strand, 32848766 - 32848571
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || |||||||||||||||| |  ||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccat 32848667  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttatc 273  Q
    ||  |||||||| |||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| || ||||| |||||    
T  32848666 tttcaaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcagtcctctttatc 32848571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 79 - 267
Target Start/End: Complemental strand, 41095793 - 41095603
Alignment:
Q  79 ggaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 176  Q
    |||| |||| |||||||||||||||||||||  ||||||||  |||||||| ||||| ||||||||||||||||||||||| |||| | |||||||||||    
T  41095793 ggagaaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttcca 41095694  T
Q  177 tttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||  |||||||| |||||||||||||||||| |||||||  ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  41095693 ttttcaaagtgtaggtcctacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 41095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 120 - 267
Target Start/End: Complemental strand, 14094142 - 14093995
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |    
T  14094142 actcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcactcaatcaaaaa 14094043  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||  | | | |||| ||||||||||||||||||| ||||||||    
T  14094042 gtgagtgttacaaagagtgttcaaaagagagtgttgctaacattcctc 14093995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 41917995 - 41918141
Alignment:
Q  83 gaatgttagcaacactctcttttgagctc--tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||||||||||||| |  ||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||     
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 227  Q
     |||||||| ||||||||||||||| || ||||||||||||||||||    
T  41918095 caaagtgtaggtcctacattgattttacccaataaaagagtgagtgc 41918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 50773294 - 50773109
Alignment:
Q  80 gaggaatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||| |||||||||||||||| ||||||  ||||||||||  |||||||||||||| || | |||||||| ||||| |||||||||||||||||||||||    
T  50773294 gagggatgttagcaacactctattttgactgctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccat 50773195  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||| ||| | || |||||||||| |||| || |||||||||| ||||||| ||||| |||| |||||||||||| |||||| ||||    
T  50773194 ttccaaaatataggtcctacattaattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 120 - 268
Target Start/End: Complemental strand, 13388480 - 13388330
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttat--gtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaa 217  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||  ||||||| |||||  |||||||| || ||||||||||||||  ||||||||    
T  13388480 actcactcttttattgggtgaaatcaatgtatgtctcaccactttatatgtgggtttcattttcaaagtgtaggtactacattgatttcatccaataaaa 13388381  T
Q  218 gagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcc 268  Q
     ||||||||  ||||| |||  ||||||||||||||||||| |||||||||    
T  13388380 aagtgagtgttagagagagtattcaaaagagagtgttgctagcattcctcc 13388330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 24436608 - 24436492
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| ||||||| | |||||||||||||| |||||||||||||||||||||| ||||  |||||||  |||||||||||||||||| ||||||||||    
T  24436608 actcacttttttatctgatgaaatcaatgtatatcccaccactttatgtgggttctattttcaaagtgtgggtcctacattgatttcacccaataaaaga 24436509  T
Q  220 gtgagtgcaagagaaag 236  Q
    | |||||  ||||||||    
T  24436508 gggagtgttagagaaag 24436492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 44739115 - 44739242
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||||||||||||||||||||||| |  ||||||||  |||||||||||| | | ||||||| ||||||||||||||||||||||||| |||  ||    
T  44739115 gaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtat 44739214  T
Q  178 ttctaaagtgtatgtcctacattgattt 205  Q
    ||| |||||||| |||||||||| ||||    
T  44739215 ttccaaagtgtaggtcctacattaattt 44739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 28109907 - 28110053
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| |||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||  ||||| | ||||||||  |||||||| |    
T  28109907 actcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccatttc-aaagtgtagatcctagaatgatttcatccaataaaaaa 28110005  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||   ||||||||| || ||||||||||||| ||| ||||||||    
T  28110006 gtgagtattagagaaagtacttaaaagagagtgttcctaacattcctc 28110053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 43851218 - 43851117
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctc--tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||||||||||||||||||||| ||| |  ||||||  |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  43851218 gaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttccat 43851119  T
Q  178 tt 179  Q
    ||    
T  43851118 tt 43851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 4578749 - 4578629
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatg-tgggttccatttctaaagtg 187  Q
    ||||||||||||||||| | | |||||||  |||||||||||||| |||||||||||||||| ||||||||||||||||  |||| ||||||| ||||||    
T  4578749 tagcaacactctcttttcaacactctctaacactcactcttttattgggtgaaatcaatgtaggtcccaccactttatgcggggtcccatttccaaagtg 4578650  T
Q  188 tatgtcctacattgatttcac 208  Q
    || | || |||||||||||||    
T  4578649 taggacccacattgatttcac 4578629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 98 - 258
Target Start/End: Complemental strand, 50425029 - 50424869
Alignment:
Q  98 tctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctac 197  Q
    |||||||||  |||||||||  |||||||||||||| || | ||||||||  ||  |||||||||||||||  |||||||||| |||||||||| || ||    
T  50425029 tctcttttggactctctctaacactcactcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccac 50424930  T
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||| || |||||||| ||||| ||  ||||| |||||  |||||||||||||||||    
T  50424929 attgatttaacccaataaaaaagtgaatgttagagagagtgcctaaaagagagtgttgcta 50424869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 29418522 - 29418668
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaat-aaaagag 220  Q
    |||||||||||| || | |||| ||||||| || |||||||||||||| |||| ||||| ||||||||  ||||||||||||||||| |||| |||| ||    
T  29418522 tcactcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataaaaaaag 29418621  T
Q  221 tgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||  | ||| |||| |||||||||| |||||||| ||||||||    
T  29418622 tgagtgatatagagagtgatcaaaagagactgttgctagcattcctc 29418668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 369 - 505
Target Start/End: Complemental strand, 1843738 - 1843601
Alignment:
Q  369 taaactgaaatcaggatgcaaaaactcctaaaataatgaaatggt-acttcattttgtcatgccacaatcaccttccatcgtccaatactatcagttcaa 467  Q
    |||||||||||  | |||||||||||||||||||||||||||||| ||| ||||||||| |   ||||||| || ||||| |||||| |||||||| ||     
T  1843738 taaactgaaatttgtatgcaaaaactcctaaaataatgaaatggttactgcattttgtcttaaaacaatcatctgccatcatccaatgctatcagtacat 1843639  T
Q  468 gttctttcaggctgtcatatctgatatctccatctgtg 505  Q
    | ||||||| ||||||||||| ||||||||||| ||||    
T  1843638 ggtctttcaagctgtcatatccgatatctccatgtgtg 1843601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 369 - 505
Target Start/End: Complemental strand, 1869347 - 1869210
Alignment:
Q  369 taaactgaaatcaggatgcaaaaactcctaaaataatgaaatggt-acttcattttgtcatgccacaatcaccttccatcgtccaatactatcagttcaa 467  Q
    |||||||||||  | |||||||||||||||||||||||||||||| ||| ||||||||| |   ||||||| || ||||| |||||| |||||||| ||     
T  1869347 taaactgaaatttgtatgcaaaaactcctaaaataatgaaatggttactgcattttgtcttataacaatcatctgccatcatccaatgctatcagtacat 1869248  T
Q  468 gttctttcaggctgtcatatctgatatctccatctgtg 505  Q
    | ||||||| ||||||||||| ||||||||||| ||||    
T  1869247 ggtctttcaagctgtcatatccgatatctccatgtgtg 1869210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 13114822 - 13114673
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  ||||||||||||||  | | |||||||| |||||||||||||||||| ||| ||||||||| ||| |||||  || |||||||||| ||    
T  13114822 ctctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgatttaac 13114723  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
     |||| | | ||||||||  ||||| ||||  ||||||||||||||||||    
T  13114722 ccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttgcta 13114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 11135808 - 11135736
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  11135808 tacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 11135736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 30679032 - 30678906
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgc 239  Q
    ||||||||||||||||||||||||| ||||||||| ||||  |||||||| | |  ||| |||||| |  |||||| ||||||||||  ||||| |||||    
T  30679032 aaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgta-gactcacaatgatttaagccaataagagagtgagtgttagagagagtgc 30678934  T
Q  240 tcaaaagagagtgttgctaccattcctc 267  Q
    |||||| |||||||||||| ||||||||    
T  30678933 tcaaaaaagagtgttgctagcattcctc 30678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 120 - 253
Target Start/End: Original strand, 15660932 - 15661063
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| || | ||||||||| |||||||||||||||||| |||||  ||||| ||| |||||| |  |||||||||| || |||||| |||    
T  15660932 actcactcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatgac--acattgatttaacccaataataga 15661029  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgt 253  Q
    |||||||  ||||| ||||  |||||||||||||    
T  15661030 gtgagtgttagagagagtgtccaaaagagagtgt 15661063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 41095720 - 41095793
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcc 268  Q
    |||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  41095720 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatttctcc 41095793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 41918064 - 41917995
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||| |||||    
T  41918064 tacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgttgctagcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 11430510 - 11430438
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||| || ||||||||    
T  11430510 tacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattcctc 11430438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 44739187 - 44739115
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||    
T  44739187 tacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctc 44739115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 1857748 - 1857617
Alignment:
Q  369 taaactgaaatcaggatgcaaaaactcctaaaataatgaaatggtacttcattttgtcatgccacaatcaccttccatcgtccaatactatcagttcaag 468  Q
    |||||||||||  | ||||||||||||||||| ||||||||||| ||| ||||||||| |   ||||||| || ||||| ||||||  ||||||| |  |    
T  1857748 taaactgaaatttgtatgcaaaaactcctaaagtaatgaaatggaactgcattttgtcttctaacaatcatctgccatcatccaatgttatcagtacgtg 1857649  T
Q  469 ttctttcaggctgtcatatctgatatctccat 500  Q
     ||||||| ||||||||||| |||||||||||    
T  1857648 atctttcaagctgtcatatccgatatctccat 1857617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 43832348 - 43832455
Alignment:
Q  160 actttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctac 259  Q
    |||||||||||||| |||||| ||||||||  ||||||||||||||| |  ||||||||||||| ||| ||| | |||| |||||||||||| ||| ||     
T  43832348 actttatgtgggtttcatttccaaagtgtagatcctacattgatttcgccgaataaaagagtgaatgctagaaagagtgttcaaaagagagttttgatat 43832447  T
Q  260 cattcctc 267  Q
    ||||||||    
T  43832448 cattcctc 43832455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 5848086 - 5848164
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacatt 200  Q
    |||||||||||| ||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||| || |||||||    
T  5848086 tcactcttttatggggtgaaattaatgtatgtctcactattttatgtgggttccatttttaaagtgtaggttctacatt 5848164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 15523249 - 15523318
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  15523249 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15523318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 15531243 - 15531312
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  15531243 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgta 15531312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 9165371 - 9165299
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||||||||||||||||| | |||| |||||||||||||| | || ||||||||    
T  9165371 tacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattcctc 9165299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 32848694 - 32848766
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| || ||||||||    
T  32848694 tacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattcctc 32848766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 9165341 - 9165400
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||    
T  9165341 actcactcttttattgggtgaaatcaatgtatgtcctaccactttatgtgagtttcattt 9165400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 2225223 - 2225317
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttc 174  Q
    |||||||| ||| |||||||  |||| | | |||||||  || ||||||||||| || ||||||||||||||||||||||||||| |||||||||    
T  2225223 gaggaatgctagtaacactcaattttcaacactctctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttc 2225317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 11135925 - 11135853
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||| ||| ||||||||||||||||||||  |||||||||  |||||||||||||| ||||||||||||||||    
T  11135925 gagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 22540407 - 22540476
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  22540407 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgta 22540476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 41948287 - 41948145
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| || | |||||||||||| | | |||||||| ||| ||||| ||||  ||||||||  ||| ||| |||||| | ||||||| |||    
T  41948287 actcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatcc-acaatgatttaaatcaataagaga 41948189  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||  ||||| |||| |||||||||| | |||||| ||||    
T  41948188 gtgagtgttagagagagtgttcaaaagagaatattgctagcatt 41948145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 50539163 - 50539222
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||||||||| || ||||||||| |||||| |||||||||||||||||||| ||||    
T  50539163 actcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattt 50539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 28109935 - 28109885
Alignment:
Q  197 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 247  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  28109935 cattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaaga 28109885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 19101742 - 19101673
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||  ||||||||    
T  19101742 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgta 19101673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 26980414 - 26980266
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  ||||||||| |||| || ||||||||||||||||||||||| ||| |||| |||| ||||  ||| | ||  ||| ||| |||||| |     
T  26980414 ctctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatcc-acaatgatttaaa 26980316  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||| |||||||||   | ||| |||| | |||||||||||||||||    
T  26980315 tcaataagagagtgagtattatagagagtgttgaaaagagagtgttgcta 26980266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 41095603 - 41095675
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  |||||||||  |||||||  ||||| ||||||||||||||||    
T  41095603 gaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgta 41095675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 41958082 - 41958191
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||| ||| ||||||| ||||| | | ||||| |  |||||||| ||||| || ||||||||||||||||||||||| ||| || |||||| ||||    
T  41958082 gaggaatgctagtaacactcacttttcaacactctcaagcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattt 41958181  T
Q  180 ctaaagtgta 189  Q
      ||||||||    
T  41958182 tcaaagtgta 41958191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 43851146 - 43851218
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||| |||||||| | |||||  | ||| ||||||||||||||||| ||||||||    
T  43851146 tacattgatttcacccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacattcctc 43851218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 28218187 - 28218120
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||| ||| ||||  ||||||||    
T  28218187 tcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgta 28218120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 4578686 - 4578749
Alignment:
Q  193 cctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||||||||||| |||||||||||||||||  ||||  |||| | |||||||||||||||||    
T  4578686 cctacattgatttcacccaataaaagagtgagtgttagag--agtgttgaaaagagagtgttgcta 4578749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 6133807 - 6133706
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  |||||| ||||||| || |||||||||| ||||||||||||  || ||||||||| ||    
T  6133807 gaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaat 6133708  T
Q  178 tt 179  Q
    ||    
T  6133707 tt 6133706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 8899071 - 8899208
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagt 237  Q
    |||||| || |||||||||||| |||| ||||||||| ||||  |||||||| |||| ||| | |||| |  |||||| |||||||||   ||||| |||    
T  8899071 tgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtcc-acaataatttaaaccaataagagagtgagtattagagagagt 8899169  T
Q  238 gctcaaaagagagtgttgctaccattcctccttatcata 276  Q
    | |||||||||| |||||||| |||| ||| || |||||    
T  8899170 gttcaaaagagattgttgctagcattactcattttcata 8899208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 13388330 - 13388403
Alignment:
Q  79 ggaggaatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||||||| |||||||||||||||||||   |||||||||  ||||||| |||||| || |||||||||||||    
T  13388330 ggaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 50308888 - 50308830
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||| |||||| ||||||||||||| |||||||||||| |||||||| ||| ||||    
T  50308888 actcacttttttattgggtgaaatcaatatatgtcccaccattttatgtgagtttcatt 50308830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 11430626 - 11430555
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  |||||||||  ||||||||||||||  |||||| ||||||||    
T  11430626 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttat-tggtgaattcaatgta 11430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 24911483 - 24911568
Alignment:
Q  101 cttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    ||||||| | |||||||  ||||| ||||||||  | ||||||| ||||||||||||||||||| ||||||||  ||||| |||||    
T  24911483 cttttgaacactctctagcactcattcttttattcgatgaaatccatgtatgtcccaccactttttgtgggttttatttccaaagt 24911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 14094112 - 14094184
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||| |||||||||  |||| |||| |||||||| | ||| |||| ||||||||    
T  14094112 tacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtcgctagcattcctc 14094184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 25543337 - 25543423
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccacttt 164  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  ||| ||||||||||  | |||||||||| ||||||||||||||||    
T  25543337 gaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccacttt 25543423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 931371 - 931472
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctct--ctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | ||||  |||||  |||||||||||||| |  || || |||||||||||||| || ||| ||||||||| ||    
T  931371 gaggaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaat 931470  T
Q  178 tt 179  Q
    ||    
T  931471 tt 931472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 32211925 - 32211788
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||||||||||  | |||||||||||||||||| || ||||| |||| |||| |||| ||| ||||| | || ||| |||||| |  |||||| |||    
T  32211925 actcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgta-gacccacaatgatttaaaccaataagaga 32211827  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||     | |||||||| | |||||||||||||||||    
T  32211826 gtgatcattaaagaaagtgttgaaaagagagtgttgcta 32211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 6133738 - 6133807
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||  ||||||||| |||||||| ||||| | || | ||||| ||||||||||| ||||||||    
T  6133738 attgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcctc 6133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 8665296 - 8665251
Alignment:
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||    
T  8665296 taaagtgtaggatctacattgatttcattcaataaaagagtgagtg 8665251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 10659948 - 10659840
Alignment:
Q  84 aatgttagcaacactctcttttgag--ctctctctatgactcactctttt-atcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    |||||||||||||||| ||||| |   |||||||||  ||||||| |||| || || ||||||||||| |||||| |||||||| ||| ||||| ||||     
T  10659948 aatgttagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaatttt 10659849  T
Q  181 taaagtgta 189  Q
     ||||||||    
T  10659848 caaagtgta 10659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 14562604 - 14562669
Alignment:
Q  156 caccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagt 221  Q
    |||||||||||||||| |||||||| |||||||    |||||||  |||||||||||||| |||||    
T  14562604 caccactttatgtgggatccatttccaaagtgtggtacctacataaatttcactcaataagagagt 14562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 18157066 - 18157127
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    |||||||||  || |||| |||||| || |||||| ||||||||||||||||||||| ||||    
T  18157066 ctctctctaacacccacttttttattggatgaaattaatgtatgtcccaccactttaagtgg 18157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 36566943 - 36567004
Alignment:
Q  128 ttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||| || ||||||||||||||||| || |||||||| ||||||| ||||  ||||||||    
T  36566943 ttttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgta 36567004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 39019572 - 39019650
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccact 162  Q
    |||||||| ||||||||||||||||| | | ||||||    |  || || |||| ||||||||||||||||||||||||||||    
T  39019572 gaggaatgctagcaacactctcttttcaacactctct----caaacactcttattgggtgaaatcaatgtatgtcccaccact 39019650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 13388450 - 13388482
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgc 227  Q
    |||||||||||||| ||||||||||||||||||    
T  13388450 tacattgatttcacccaataaaagagtgagtgc 13388482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 19090398 - 19090209
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || ||||||||||||||||||  ||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19090398 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 19090299  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||||| |||||||||||| ||||  |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  19090298 ttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 19090209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 10060856 - 10061045
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||||||||||| | |||| ||| ||  ||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  10060856 gaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccat 10060955  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||  |||||||| ||||||||||||| |||| |||||||| ||||||||  ||||| ||||||||||||||||||||||||  |||||||    
T  10060956 tttcaaagtgtaggtcctacattgatctcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgctaatattcctc 10061045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 89 - 264
Target Start/End: Complemental strand, 35128897 - 35128724
Alignment:
Q  89 tagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    ||||||||||||||||||| |  ||||||||  | |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  35128897 tagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagt 35128798  T
Q  187 gtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    ||| |||||||||||||||||| |||||||| | ||||||  |||||    |||||||||||||||||| || |||||    
T  35128797 gtaggtcctacattgatttcacccaataaaaaaatgagtgttagaga----gctcaaaagagagtgttgttagcattc 35128724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 6531481 - 6531305
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||||||||||||  ||||||| |  |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  6531481 gaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttccat 6531382  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||  ||||||| |||||||||| |||||||      ||||||||||||| ||||| | | || |||||||||||||||||    
T  6531381 ttccgaagtgtaggtcctacattaatttcac----ctaaagagtgagtgctagagagaatacttaaaagagagtgttgcta 6531305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 109 - 265
Target Start/End: Complemental strand, 19737587 - 19737431
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  ||||||||||| || ||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||| ||||||||||||||| |     
T  19737587 ctctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtaggtcctacattgatttgag 19737488  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 265  Q
     |||||||||||||||||  ||||| | || ||||||||||||||||||| ||||||    
T  19737487 ccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 4595770 - 4595922
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| | |||||||||||||||||| ||||||||| | ||||||||||||  |||||||| |||||||||| |||||||    
T  4595770 ctctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgtaagtcctacattaatttcac 4595869  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
      || |||||||||||||| | ||  ||| |||||||||||||||||||| ||||    
T  4595870 caaagaaaagagtgagtgctaaag--agttctcaaaagagagtgttgctagcatt 4595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 373396 - 373544
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || ||||| ||| ||||||||  ||||||||  || |||| |||||| |||| |||||||||||||||||| |||||||||||| ||||||    
T  373396 gaggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcactttatgtggattccat 373495  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    ||  |||| ||| ||||||||||||||| |  |||||||| ||| ||||    
T  373496 tttcaaagggtaggtcctacattgattttatccaataaaatagtaagtg 373544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 34905364 - 34905512
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| || ||||||||||||||||||||||||||| | ||||||| ||||  |||||||| | || ||| |||||| |     
T  34905364 ctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgta-gacccacaatgatttaaa 34905462  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
     |||||| |||||||||   |||||  ||| |||||||||||||||||||    
T  34905463 ccaataagagagtgagtattagagagggtgttcaaaagagagtgttgcta 34905512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 6992383 - 6992305
Alignment:
Q  149 tatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 227  Q
    |||||| |||||||||||||| ||| |||||| |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  6992383 tatgtctcaccactttatgtgagtttcatttccaaagtgtaggtcctacattgattttactcaataaaagaatgagtgc 6992305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 6531409 - 6531481
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||||||||||||||  |||| ||| |||||||||||||||||||| ||||||||    
T  6531409 tacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcattcctc 6531481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 19090326 - 19090398
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| || ||||||||    
T  19090326 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 19090398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 264
Target Start/End: Complemental strand, 12794938 - 12794811
Alignment:
Q  137 gtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaag 236  Q
    ||||||| ||||||| ||||||||||||||||| ||| |||||  ||| |||| |||||||||| ||||||  |||||||||| |||||   |||| ||     
T  12794938 gtgaaattaatgtatatcccaccactttatgtgagtttcattttcaaaatgtaggtcctacattaatttcatccaataaaagaatgagtattagagtaaa 12794839  T
Q  237 tgctcaaaagagagtgttgctaccattc 264  Q
    |  ||||||||||||||| ||| |||||    
T  12794838 tattcaaaagagagtgttactaacattc 12794811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 35128834 - 35128897
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||||||| || |||||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  35128834 tacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgttgcta 35128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 10061045 - 10060973
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||||| |||||||||||||||||||||  |||||||||  ||||||| |||||| |||||| |||||||||    
T  10061045 gaggaatattagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgta 10060973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 19090209 - 19090281
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  |||||||||  |||||||||||||| || |||| ||||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgta 19090281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 21987331 - 21987400
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||| ||||||||||||||| | |||| ||||| ||||||||    
T  21987331 actcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgta 21987400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 9940445 - 9940389
Alignment:
Q  177 tttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagaga 233  Q
    |||| ||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  9940445 tttccaaagtgtaaatcctacattgatttcacccaataaaagagtgagtgctagaga 9940389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 10133310 - 10133230
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  |||||||| ||||| || |||||| | ||||||||||||||||||||| |||||| ||||  ||||||||    
T  10133310 ctctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgta 10133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 445857 - 445916
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||||| |||||| || ||||||||||||||||| ||||||||| ||||||||| ||||    
T  445857 actcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattt 445916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 4595811 - 4595768
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtg 238  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  4595811 tacattgatttcactcaataaaagagtgagtgctagagagagtg 4595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 19737431 - 19737501
Alignment:
Q  82 ggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||| ||||||||||||||||||| |  ||||||||| |||||||||||||| || | |||||||||||    
T  19737431 ggaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgta 19737501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 19737546 - 19737605
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgtt 254  Q
    |||||||||||||| |||| ||||||||||||| ||||| ||||||||||| | ||||||    
T  19737546 tacattgatttcacccaattaaagagtgagtgctagagagagtgctcaaaataaagtgtt 19737605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 5106337 - 5106406
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || | ||||||||||||||||||||||||| |||||| || ||||  ||||||||    
T  5106337 actcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgta 5106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 31116296 - 31116196
Alignment:
Q  91 gcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    ||||||||| ||||||| | |||||| | ||  |||||||| ||| || ||||||||||||||||||||| ||||| |||| |||| ||||| || ||||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  189 a 189  Q
    |    
T  31116196 a 31116196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 373468 - 373396
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| || |||||||| |||| |||| ||||| ||||||||||| ||| ||||| || ||||||||    
T  373468 tacattgattttacccaataaaaaagtgggtgctagagagagtgctcaaaaaagaatgttgttagcattcctc 373396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 10060928 - 10060856
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||  ||||||||||||| ||  | | | |||| ||||||||||||||||||| ||||||||    
T  10060928 tacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgttgctagcattcctc 10060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 16436122 - 16436172
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  16436122 tgaaatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgta 16436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 32599086 - 32598985
Alignment:
Q  123 cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtg 222  Q
    ||||||||||| || || |||  ||||||||||| ||||||| ||||||| | ||||| ||||||||  | | ||| |||||| | ||||||||||||||    
T  32599086 cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattc-acaatgatttaaatcaataaaagagtg 32598988  T
Q  223 agt 225  Q
    |||    
T  32598987 agt 32598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 445887 - 445815
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  |||||||| ||||||||| ||||| |||| | ||||  |||| |||||| ||||||||    
T  445887 tacattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcctc 445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 9940387 - 9940427
Alignment:
Q  110 tctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  9940387 tctctctagcactcactcttttattgggtgaaatcaatgta 9940427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 34905405 - 34905337
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||  |||||||||||||||||  ||||| |||| | ||||  ||||||||||| ||||    
T  34905405 tacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 35128724 - 35128789
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||| || |||||||||||||||||  |||||||  ||||| | |||||| ||||||||||||||||    
T  35128724 gaatgctaacaacactctcttttgag--ctctctaacactcatttttttattgggtgaaatcaatgta 35128789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 37600313 - 37600124
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || ||||||||||||||||||  ||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37600313 gaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 37600214  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||    
T  37600213 ttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcattcctc 37600124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 80 - 271
Target Start/End: Complemental strand, 10769908 - 10769715
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||  ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  10769908 gaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttccat 10769809  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcctta 271  Q
    |||||||||||| |||||||||||||||||   ||||||||||| ||||| ||||| ||||||||||||||||||||  || ||||||||||||    
T  10769808 ttctaaagtgtaggtcctacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgttattagcattcctcctta 10769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 84 - 269
Target Start/End: Complemental strand, 54141072 - 54140885
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    ||||||| ||||||| ||||||||||  ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||      
T  54141072 aatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttc 54140973  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 269  Q
    |||||||| || ||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  54140972 aaagtgtaggttctacattgatttcatccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattcctcct 54140885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 84 - 258
Target Start/End: Complemental strand, 24749089 - 24748913
Alignment:
Q  84 aatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    ||||||||||| | ||||||||||  ||||||||||  ||||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  24749089 aatgttagcaatattctcttttgaacgctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttct 24748990  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||| |||||||||||||||||  |||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  24748989 aaagtgtaggtcctacattgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 46237223 - 46237090
Alignment:
Q  86 tgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaa 183  Q
    ||||||||||||||||||||||||  ||||||||  | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  46237223 tgttagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttctaa 46237124  T
Q  184 agtgtatgtcctacattgatttcactcaataaaa 217  Q
    | |||| |||||||||||||||||  ||||||||    
T  46237123 aatgtaggtcctacattgatttcatccaataaaa 46237090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 82 - 264
Target Start/End: Complemental strand, 38928190 - 38928006
Alignment:
Q  82 ggaatgttagcaacactctcttttgagctct--ctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||| |||||||||| ||||||| || ||  |||||  | ||| |||||||| |||| |||||||||||| |||| | ||||||| ||||||||||||    
T  38928190 ggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgtatatccctctactttatatgggttccattt 38928091  T
Q  180 ctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    | |||||||| ||| |||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||| |||||    
T  38928090 ccaaagtgtaggtcttacattgatttcacccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 27243042 - 27243231
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||| ||| ||||||||||||||||||| |  ||||||||  |||||||||||||| || | ||||||||| ||||||||||||||||||||||||||||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccat 27243141  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||||||| || |||||||||| || |||| | |||||||||   ||| | |||| ||||||||||||||||||| || |||||    
T  27243142 ttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagcactcctc 27243231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 29775243 - 29775136
Alignment:
Q  158 ccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgct 257  Q
    |||| |||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||  |||| ||||| |||||||||||||||||||||||    
T  29775243 ccacattatgtgggttccatttccaaagtgtaggtcctaccttgatttcacccaataaaagagt--gtgctagagagagtgctcaaaagagagtgttgct 29775146  T
Q  258 accattcctc 267  Q
    | ||||||||    
T  29775145 agcattcctc 29775136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 111 - 251
Target Start/End: Original strand, 357790 - 357928
Alignment:
Q  111 ctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactc 210  Q
    |||||||  |||||||||||||| | | |||||||||||||| | ||||||||||||||||||||||||| ||||||||   |||||||||||||||  |    
T  357790 ctctctagcactcactcttttattgagggaaatcaatgtatgcctcaccactttatgtgggttccatttccaaagtgtagtacctacattgatttcatcc 357889  T
Q  211 aataaaagagtgagtgcaagagaaagtgctcaaaagagagt 251  Q
    ||||||| ||||||||  | ||| |||| ||||||||||||    
T  357890 aataaaaaagtgagtg--atagagagtgttcaaaagagagt 357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 13809083 - 13809267
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgact-cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttcta 182  Q
    |||| |||||||||||||||||   | |||||| | ||| ||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||| |    
T  13809083 aatgctagcaacactctcttttacacactctctctaacttcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttcca 13809182  T
Q  183 aagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| |||| || |||||| ||| || |||||| ||| ||| ||  ||||||||||  ||| | |||||||||||| || |||||    
T  13809183 aagtatatgacccacattgttttaacccaataagagaatgaatgttagagaaagtgtccaagaaagagtgttgctagcaatcctc 13809267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 50661695 - 50661564
Alignment:
Q  90 agcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtg 187  Q
    |||||||||||||||| | |  ||||||||  ||| ||||||||||  | | ||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  50661695 agcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatg 50661596  T
Q  188 tatgtcctacattgatttcactcaataaaaga 219  Q
    |||| || |||||||||| || ||||||||||    
T  50661595 tatgacccacattgatttaacccaataaaaga 50661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 43657137 - 43657000
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| ||||||  | |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||  |||||| ||||||  ||||||| |    
T  43657137 actcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtaggtctcacattgttttcaccaaataaaaaa 43657038  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgct 257  Q
     | |||   | ||||||| ||||||| |||||||||||    
T  43657037 attagtattaaagaaagtactcaaaatagagtgttgct 43657000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 55452196 - 55452087
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||||||||||||||| ||||||| | ||||||   |||||||||||||| || || |||  ||||||||||||||||||| ||||||||| ||||    
T  55452196 gaggaatgttagcaacactcacttttgaacactctctggtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctattt 55452097  T
Q  180 ctaaagtgta 189  Q
    | ||||||||    
T  55452096 ccaaagtgta 55452087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 24734744 - 24734886
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| || ||||||||| ||||||||||||||||| ||||||||| ||||  |||| ||| | || ||| |||||| |  |||||| |||    
T  24734744 actcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagta-ggcccacaatgatttaaaccaataagaga 24734842  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||   ||||| |||| ||||||||||||||||||| ||||    
T  24734843 gtgagtattagagagagtgttcaaaagagagtgttgctagcatt 24734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 41452036 - 41451894
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| || ||||||||| ||||||||||||||||| ||||||||| ||||  |||| ||| | || ||| |||||| |  |||||| |||    
T  41452036 actcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagta-gacccacaatgatttaaaccaataagaga 41451938  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||   ||||| |||| ||||||||||||||||||| ||||    
T  41451937 gtgagtattagagagagtgttcaaaagagagtgttgctagcatt 41451894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 21232705 - 21232604
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||| ||||||||||| || ||| |   ||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  21232705 gaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttccat 21232606  T
Q  178 tt 179  Q
    ||    
T  21232605 tt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 46160946 - 46161055
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||| ||||||||||| ||||||| | |||||||  |||||||||||||| || ||||||||||  |||||| |||||||| ||| ||||| ||||    
T  46160946 gaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctattt 46161045  T
Q  180 ctaaagtgta 189  Q
    | ||||||||    
T  46161046 ccaaagtgta 46161055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 37600241 - 37600313
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| || ||||||||    
T  37600241 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 37600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 255
Target Start/End: Original strand, 28529250 - 28529424
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  |||||||||||||| || ||||||||||||||||||||||||  | ||||||||| ||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccac--tgtgtgggttcaat 28529347  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||  |||||||| | || ||| |||||| |  |||||| |||||||||   |||||  ||| ||||||||||||||||    
T  28529348 tttcaaagtgta-gacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 20493628 - 20493452
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  |||||||| ||||| || |||||||||||||||||| |||||||| || |||||| ||    
T  20493628 gaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaat 20493529  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
     |  |||||||| | || ||| |||||| |  |||||| |||||||||   ||||| |||| ||||||||||||||||    
T  20493528 attcaaagtgta-gacccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 46450064 - 46450174
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccac-tttatgtgggttccatt 178  Q
    |||||||| ||||||||||| ||||||| | |||||||  ||||||||||||||  | || ||||||||||||||||||||| ||| ||||||||| |||    
T  46450064 gaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatt 46450163  T
Q  179 tctaaagtgta 189  Q
    |  ||||||||    
T  46450164 tgcaaagtgta 46450174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 21232633 - 21232705
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||| | ||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  21232633 tacattgatttcacccaataaaaaaatgagtgctaaagaaagtgctcaaaagagggtgttgctagcattcctc 21232705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 46237157 - 46237220
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||||||||  |||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  46237157 tacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgttgcta 46237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 20791335 - 20791472
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||| ||||||||  |||  || |||||| |  |||||| | |    
T  20791335 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatcc-gcaatgatttaaaccaataagaaa 20791433  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||   ||||| |||| ||||||||||||| |||||    
T  20791434 gtgagtattagagagagtgttcaaaagagagtggtgcta 20791472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 46575987 - 46576072
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgattt 205  Q
    ||||||||| |||| || ||||| ||||||||||||||||||||| ||||||||||||||  ||| |||| | || ||||||||||    
T  46575987 actcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgattt 46576072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 5452245 - 5452142
Alignment:
Q  78 aggaggaatgttagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 175  Q
    |||||||||| ||||||||||| ||||| | | |||||| | ||  |||||||||||| || |||||||||||||| |||||||||||| ||||| |||     
T  5452245 aggaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattca 5452146  T
Q  176 attt 179  Q
    ||||    
T  5452145 attt 5452142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 10769836 - 10769908
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||  |||||||||||  |||  ||||| |||||||||||||||||||||||| ||||||||    
T  10769836 tacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgttgctagcattcctc 10769908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 28529322 - 28529250
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||||||    
T  28529322 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcctc 28529250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 54141004 - 54141064
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  54141004 tacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagaaagtgttg 54141064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 37776844 - 37776702
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||||||||||  | |||||||||||||||||| |||||||| ||||||||| ||||  |||||||| | |||||| |||||| |  || ||| |||    
T  37776844 actcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta-gacctacaatgatttaaaccactaagaga 37776746  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||   |||||  ||| ||| || |||||||||||| ||||    
T  37776745 gtgagtattagagagggtgttcataaaagagtgttgctagcatt 37776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 44844040 - 44844163
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgc 239  Q
    |||| |||||||||||||||| || ||||| |||| |||| ||||||||||| || ||| |||||| |  |||||||| ||||||||  ||||| ||||     
T  44844040 aaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagtgttagagagagtgt 44844139  T
Q  240 tcaaaagagagtgttgctaccatt 263  Q
      |||||||||| |||||| ||||    
T  44844140 caaaaagagagtcttgctatcatt 44844163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 29775136 - 29775202
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaa 146  Q
    |||||||| ||||||||||||||||||||| |||||| |  | ||||||||||| ||||||||||||    
T  29775136 gaggaatgctagcaacactctcttttgagcactctctctagcacactcttttattgggtgaaatcaa 29775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 52124139 - 52123955
Alignment:
Q  80 gaggaatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| |  ||||||||||  |||||||  ||| | || |||||| |||||||||||||| | ||| || |||||| ||    
T  52124139 gaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaat 52124040  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||  |||||||| | || ||| |||||| |  |||||| | |||||||   ||||| |||| ||||||||||||||||||| ||||    
T  52124039 tttcaaagtgta-gacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 52123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 14236058 - 14236127
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||| ||||||||||||||||||| | |||| ||||| ||||||||    
T  14236058 actcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgta 14236127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 18427291 - 18427222
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||| ||||| || ||||||||||||||||||||||| ||| ||||||||| ||||  ||||||||    
T  18427291 actcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgta 18427222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 24748913 - 24748976
Alignment:
Q  89 tagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||| || |||||||||||||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 26310598 - 26310518
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  ||| |||||||||| || ||||||||||||||||||||||| ||| ||| ||||| ||||  ||||||||    
T  26310598 ctctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgta 26310518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 30624633 - 30624729
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||| ||||||||||| ||||||||| |||||||  |||||||||||||| |  | |||| |||||||||  ||||||||| |||| |||| ||||    
T  30624633 gaatgctagcaacactcacttttgagcactctctaacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaattt 30624729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 37776814 - 37776886
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||   |||||||||||||||||  ||||||||| | ||||| ||||||||||| ||||||||    
T  37776814 tacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcctc 37776886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 40716041 - 40715939
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||||||||||||||| ||||| | |  ||||||||  ||||||||||||||  |||||||| |||||||| | || |||||| ||||||||| |||| |    
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaattttt 40715942  T
Q  182 aaa 184  Q
    |||    
T  40715941 aaa 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 54140885 - 54140959
Alignment:
Q  78 aggaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||| ||||||||||||||||||||  || ||||||  |||||||| ||||| || |||||||||||||    
T  54140885 aggaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 27243112 - 27243042
Alignment:
Q  197 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||| |  |||||||||||||||||  ||||| |||| ||||||||||||||||||| ||| ||||    
T  27243112 cattgattttatccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcatccctc 27243042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 38928006 - 38928075
Alignment:
Q  83 gaatgttagcaacactctcttttgagctct--ctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||| ||||||||||||||||||| | ||  |||||  |||||||||||||| ||||||||||||||||    
T  38928006 gaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 46161013 - 46160946
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||  |||||||||||||||||| ||||  |||| ||||||| ||||||||||| ||||||||    
T  46161013 attgatttcatccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagcattcctc 46160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 37600124 - 37600196
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  |||||||||  || ||||||||||| || |||| ||||||||    
T  37600124 gaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgta 37600196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 20493556 - 20493628
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  ||||||| |||||||||  ||||| |||| | ||||| ||||||||||| ||||||||    
T  20493556 tacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctc 20493628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 29588869 - 29588746
Alignment:
Q  125 ctcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgag 224  Q
    ||||||||| || | ||||||||||||||||   ||||||||||| |||| ||||  |||||||| | || ||| |||||| | ||||||| ||||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgta-gacccacaatgatttaaatcaataagagagtgag 29588771  T
Q  225 tgcaagagaaagtgctcaaaagaga 249  Q
    ||  | ||| |||| ||||||||||    
T  29588770 tgttatagagagtgttcaaaagaga 29588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 189
Target Start/End: Original strand, 752461 - 752500
Alignment:
Q  150 atgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgta 752500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 36750993 - 36751044
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||| || |||||| |||||||||||| |||| |||||||||||||||    
T  36750993 tgaaatcagtgcatgtcctaccactttatgtaggtttcatttctaaagtgta 36751044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 138832 - 138794
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagaga 233  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  138832 tacattgatttcattcaataaaagagtgagtgctagaga 138794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 357829 - 357791
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagaga 233  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  357829 tacattgatttccctcaataaaagagtgagtgctagaga 357791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 357928 - 357874
Alignment:
Q  96 actctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||| | |||||||| ||||||| |||||| || |||||||||||||    
T  357928 actctcttttgaacactctctatcactcacttttttattggatgaaatcaatgta 357874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 5452171 - 5452245
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 269  Q
    |||||||||||||  |||||||||||||| ||  | ||| |||| | ||||| ||||||||||| ||||||||||    
T  5452171 tacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcctcct 5452245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 29389124 - 29389198
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 269  Q
    ||||||||||| | ||||| ||||||||||||  | ||  |||||||||||| ||||||||||| ||||| ||||    
T  29389124 tacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcattcatcct 29389198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 30624700 - 30624633
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||| |||| | ||||||||||||||||||  |||||  ||||||||||| ||||||||||| |||||    
T  30624700 tacattaattttattcaataaaagagtgagtgttagaga--gtgctcaaaagtgagtgttgctagcattc 30624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 38928120 - 38928190
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 265  Q
    ||||||||||| || |||||||||| ||| | | ||||| ||||| ||||||| |||||||||| ||||||    
T  38928120 tacattgattttacccaataaaagactgaatactagagatagtgcacaaaagatagtgttgctagcattcc 38928190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 52951475 - 52951545
Alignment:
Q  199 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcct 269  Q
    |||||||||  |||| | ||||||||||| ||||| |||| | ||||||||||||||||| || |||||||    
T  52951475 ttgatttcatccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagcactcctcct 52951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 8825130 - 8825061
Alignment:
Q  110 tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||||||  |||||| |||||||  | |||||||||| |||||||||||| |||||| |||||| ||||    
T  8825130 tctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattt 8825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 29389198 - 29389110
Alignment:
Q  78 aggaggaatgttagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccacttt 164  Q
    |||| ||||| ||||||||||| ||||||||| ||| || | ||  ||||||||| || |  | |||||||||||||||||||||||||    
T  29389198 aggatgaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccacttt 29389110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 43657107 - 43657156
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaa 244  Q
    |||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  43657107 tacattgatttcatcaaataaaatagtgagtgctagagaaagtgctcaaa 43657156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 46450118 - 46450064
Alignment:
Q  211 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||||| |||||  ||| ||||||| ||||||||||| ||||||||    
T  46450118 aataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattcctc 46450064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 48351464 - 48351545
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtat 190  Q
    |||||| || ||| ||||||||||| || | |||||||| |||||| ||| ||||| ||||||||| ||||  |||||||||    
T  48351464 ctctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtat 48351545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 2009035 - 2009102
Alignment:
Q  121 ctcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||||| | |||||| ||||||||| |||||||||||||| | |||  ||| |||||||||    
T  2009035 ctcactcttttatcagatgaaattaatgtatgt-ccaccactttatgtagtttcagtttttaaagtgta 2009102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 40702289 - 40702197
Alignment:
Q  94 acactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    |||||| ||||| | | |||||||  ||| ||||||||||  | |||||| ||||||||  ||| |||||||||||||||| |||| ||||||    
T  40702289 acactcacttttcaacactctctagcacttactcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagt 40702197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 40715973 - 40716041
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||| |||||||   |||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||    
T  40715973 tacattaatttcaccatataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 83 - 267
Target Start/End: Original strand, 42182889 - 42183075
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| |||||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 42182988  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
     |||||||| |||||||||||||||||| |||||||||||| |||||  |||| |||| ||||||||||||||| ||| ||||||||    
T  42182989 caaagtgtaggtcctacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgttactagcattcctc 42183075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 80 - 266
Target Start/End: Original strand, 1110195 - 1110383
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||||||| ||||  ||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  1110195 gaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccat 1110294  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    ||| ||||| ||||||||||||||||||||| |||||||||||||| ||  ||| | ||||||||||| ||||||||||||| ||||||    
T  1110295 ttccaaagtatatgtcctacattgatttcacccaataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgctacaattcct 1110383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 28898220 - 28898034
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  28898220 gaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcat 28898121  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    ||| ||||||||  ||||||||||||||||  |||||||||||||||||| | ||| ||| |||||||||||||||||||| |||||    
T  28898120 ttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcattc 28898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 15508911 - 15509100
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||||||||||||||||||||||| | ||||  |||  |||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccat 15509010  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| ||||||||  ||||||||||||||||| |||| ||||||| ||||  | ||| |||||| ||||||||||||||||| ||||||||    
T  15509011 ttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgctaacattcctc 15509100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 84 - 255
Target Start/End: Original strand, 37228499 - 37228673
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaa-tcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    |||| |||||||||||||||||||||  ||||||||  |||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |||     
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgtttt 37228598  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
     |||||| | |||||||||||||||||| |||||||| ||||||||| ||| | |||||||||||||||||||||    
T  37228599 caaagtgcaggtcctacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttg 37228673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 4964856 - 4964671
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||| |||||||||||  |||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||||| || |||    
T  4964856 gaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcat 4964757  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||  |||||||| ||||||||||||| | |  |||||||||||||||||| ||||| |||  |||||||||||| |||||| ||||    
T  4964756 tttcaaagtgtaggtcctacattgatcttatccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 238
Target Start/End: Complemental strand, 31395628 - 31395468
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||||||||||||||||||||||||| |||||| |   |||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccactttatgtggattccat 31395529  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtg 238  Q
    ||| | |||||| |||||||||| ||||||| |||||||||| ||||||| ||||| ||||    
T  31395528 ttccatagtgtaggtcctacatttatttcacccaataaaagattgagtgctagagagagtg 31395468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 37719949 - 37719831
Alignment:
Q  149 tatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagag 248  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| | ||||||||||||||    
T  37719949 tatgtcccaccattttaagtggattccatttctaaagtgtatgtcctacattgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagag 37719850  T
Q  249 agtgttgctaccattcctc 267  Q
    | |||||||| ||||||||    
T  37719849 aatgttgctagcattcctc 37719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 84 - 256
Target Start/End: Complemental strand, 24895444 - 24895272
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaa 183  Q
    |||| ||||||||||||||||||  |  ||||||  |||||||||||||  || | |||||||||||| | |||||| |||||||| |||||||||| ||    
T  24895444 aatgctagcaacactctcttttggacagtctctaatactcactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaa 24895345  T
Q  184 agtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgc 256  Q
    |||||||| || |||||||||| || |||| ||||||||||||  ||||| |||   |||||||||| |||||    
T  24895344 agtgtatgacccacattgatttaacccaatgaaagagtgagtgttagagagagtatccaaaagagagagttgc 24895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 1107039 - 1107123
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttat 166  Q
    ||||||||||||||||||||||||||  ||||||||  || ||||||||||| ||||||||||||||||||||||||||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttat 1107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 6315667 - 6315844
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||||||||||||||||||||||||           ||||||| |||||  || |||||||||||||||| |||||||||||| | ||||||||||    
T  6315667 gaggaatgttagcaacactctcttttgagt----------actcacttttttactggatgaaatcaatgtatgttccaccactttatataggttccattt 6315756  T
Q  180 ctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    | |||||||| |||||||||| ||||    |||||||||||||| |   | | | ||||||||||||||||||||| || ||||||||    
T  6315757 ccaaagtgtaggtcctacattaattttttccaataaaagagtgaatattaaaaagagtgctcaaaagagagtgttgttagcattcctc 6315844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 42182958 - 42182889
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  42182958 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 28898148 - 28898220
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||    
T  28898148 tacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctc 28898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 37398994 - 37398808
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| || ||||||||| |||| |||  ||||||||  ||||| |||||||| | ||||||||||| |||||  ||||| ||||| || |||  ||||     
T  37398994 gaatgctaacaacactctattttaagcactctctctaatactcaatcttttattgagtgaaatcaatatatgtttcaccattttatatgagttttatttt 37398895  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
     |||||||| ||||||||| |||||||  |||||||| ||| ||||  ||||| | ||||||||| |||||||||||| ||||||||    
T  37398894 caaagtgtaggtcctacatggatttcatccaataaaaaagtaagtgttagagagaatgctcaaaaaagagtgttgctagcattcctc 37398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 20951686 - 20951603
Alignment:
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||| |||||||||||||||||| |||||||||| | ||||| ||||  |||||||||||||||||||||||| ||||||||    
T  20951686 aaagtgtaggtcctacattgatttcacccaataaaagaataagtgctagag--agtgctcaaaagagagtgttgctagcattcctc 20951603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 12989188 - 12989367
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | | |||||| |   ||||||||||| || || ||||||||||||||||||||||||||| | ||| ||| ||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctat 12989287  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||  ||||||| | || ||| |||||| |  |||||| |||||||||   ||||| |||| |||||||||||||||||||    
T  12989288 ttccgaagtgta-gacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgcta 12989367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 27969000 - 27968919
Alignment:
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  27969000 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 28091587 - 28091668
Alignment:
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  28091587 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 28101819 - 28101900
Alignment:
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||    
T  28101819 aaagtgtaggtcctacactaatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 1107107 - 1107039
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||    
T  1107107 tacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctaacatt 1107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 1110267 - 1110195
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||||||||||||||||||||  ||||| | ||||| |||||||||||||||| ||||||||    
T  1110267 tacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctc 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 15508983 - 15508911
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||||||||||||||||||||||||  ||| | |||| ||||||||||||||||||| ||||||||    
T  15508983 tacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgctaacattcctc 15508911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 31395556 - 31395628
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  31395556 tacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgttgctaacattcctc 31395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 33747059 - 33746954
Alignment:
Q  121 ctcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagag 220  Q
    ||||||||||||| |  |||||||||| |||||||||||||||||| | ||||||||||||||||| || || | |||||| |||||  |||||||| ||    
T  33747059 ctcactcttttattga-tgaaatcaatatatgtcccaccactttatattggttccatttctaaagtataggttccacattgttttcatccaataaaaaag 33746961  T
Q  221 tgagtgc 227  Q
    |||||||    
T  33746960 tgagtgc 33746954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 9470108 - 9470189
Alignment:
Q  108 gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||||||  |||||||||||||| || ||||||||||||||||||||||||||| | ||||||| ||||  ||||||||    
T  9470108 gctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgta 9470189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 4964784 - 4964856
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||| ||||||||| ||||| ||| ||||||||||| |||||||| ||||||||    
T  4964784 tacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgttgctagcattcctc 4964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 37228559 - 37228499
Alignment:
Q  203 tttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  37228559 tttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 6980272 - 6980126
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| || ||||||||| |||||| | |||||||| |||| |||| ||||  ||||| || | || ||| ||||||||     
T  6980272 ctctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtata-gacccacaatgatttcaa 6980174  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgc 256  Q
      ||||| |||||||||   |||||||||| |||||||||||||||||    
T  6980173 ctaataagagagtgagtattagagaaagtgttcaaaagagagtgttgc 6980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 18511392 - 18511291
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctc--tatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | | |||||  ||| |||||||||||||| || | ||||||||||||||||||| | ||||||||||||| ||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaat 18511293  T
Q  178 tt 179  Q
    ||    
T  18511292 tt 18511291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 20951603 - 20951673
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||| |||||||  ||| | |||||||| ||||||||||||||||    
T  20951603 gaggaatgctagcaacactctcttttgagcactctctagcacttattcttttattgggtgaaatcaatgta 20951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 263
Target Start/End: Complemental strand, 26767944 - 26767760
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  ||| |||||||||  || ||||||||||||||||||||||||||| || |||||| ||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaat 26767845  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||  ||| |||| | |  ||| |||||| |  ||||||||||||||||   ||| | |||| |||||||| |||||||||| ||||    
T  26767844 tttcaaattgta-gactcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcatt 26767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 38104307 - 38104393
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||||||||| || ||||||| || | ||||| | ||||||||||    
T  38104307 aaatcaatgtatgttccaccactttatttgggttccattcccaaagtgtatgacccacattgaattaattcaatgagagagtgagtg 38104393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 17188064 - 17188153
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtg 169  Q
    ||||||||||| |||||||| ||||| | |||||||||| ||||||| |||||| || |||||||||||| | || ||||||||| ||||    
T  17188064 gaggaatgttaccaacactcacttttcaactctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtg 17188153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 45554567 - 45554650
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccacttt 164  Q
    ||||| ||||||||||| ||||| | |  ||||||||  |||||||||||||| || |||||||||||||||||||||||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccacttt 45554650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 21447158 - 21447245
Alignment:
Q  135 gggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtg 222  Q
    |||||||||| || |  ||||||||| ||||||||||  ||||||| |||||||| | || ||||||||||||| |||||||||||||    
T  21447158 gggtgaaatccatatgggtcccaccattttatgtgggacccatttccaaagtgtaagacccacattgatttcacacaataaaagagtg 21447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 263
Target Start/End: Complemental strand, 35316550 - 35316400
Alignment:
Q  112 tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactca 211  Q
    ||||||| ||||||||||||||  | | |||| |||||||||||||||| ||||||| | ||| |||| |||| |||| | || ||| |||||| | |||    
T  35316550 tctctattactcactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgta-gacccacaatgatttaaatca 35316452  T
Q  212 ataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||| |||||||||   | | | |||||||||||||||||||| ||| ||||    
T  35316451 ataagagagtgagtatcataaagagtgctcaaaagagagtgttactagcatt 35316400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 258
Target Start/End: Original strand, 2122826 - 2122971
Alignment:
Q  112 tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactca 211  Q
    ||||||| | ||||||||| || || ||||||||||||||||  ||||||||| | ||  ||| ||||||| |||||| || | ||  |||||| | |||    
T  2122826 tctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgtatgcattctatttctagagtgtaagttc-actatgatttaaatca 2122924  T
Q  212 ataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||| ||||||||| | ||||||| || |||||| ||||||||||||    
T  2122925 ataagagagtgagtaccagagaaaatgttcaaaaaagagtgttgcta 2122971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 267
Target Start/End: Original strand, 44274262 - 44274419
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  | ||||||||| || || | ||||||||||||||||||||||||| ||||||||| | ||  ||||||||  ||| ||| |||||| |     
T  44274262 ctctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatcc-acaatgatttaaa 44274360  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
     |||||| ||||||||||  ||||| | |  | |||||||||||||| || ||||||||    
T  44274361 ccaataacagagtgagtgttagagagaatatttaaaagagagtgttgttagcattcctc 44274419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 15509100 - 15509028
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||||||||||||||||| ||  |||||| ||| ||| ||||||| || ||||||||||||||||    
T  15509100 gaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgta 15509028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 45554636 - 45554567
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||| ||||||||||| |||||    
T  45554636 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 45554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 25238399 - 25238284
Alignment:
Q  140 aaatcaatgtatgtcccaccactt-tatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtg 238  Q
    ||||||||||||||| || ||||| | ||||||||| ||||  ||||||||  ||| ||| |||||| |  |||||||| ||||||||| ||||||||||    
T  25238399 aaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatcc-acaatgatttaaaccaataaaaaagtgagtgctagagaaagtg 25238301  T
Q  239 ctcaaaagagagtgttg 255  Q
     | ||||||||||||||    
T  25238300 tttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 109 - 172
Target Start/End: Original strand, 10339794 - 10339857
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggt 172  Q
    |||||||||  ||||||| |||||| |||  ||||||||| |||||||||||||||||||||||    
T  10339794 ctctctctagcactcactattttattggggaaaatcaatgaatgtcccaccactttatgtgggt 10339857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 27968919 - 27968980
Alignment:
Q  84 aatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaat 143  Q
    |||| ||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||    
T  27968919 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 28091668 - 28091607
Alignment:
Q  84 aatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaat 143  Q
    |||| ||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||    
T  28091668 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 28101900 - 28101839
Alignment:
Q  84 aatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaat 143  Q
    |||| ||||||||||||||||||||  |||||||||  |||||||||||||| |||||||||    
T  28101900 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  83 gaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||| ||||||||||||||||||||  |||||| ||  |||||||||||||| || |||||||||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 8009521 - 8009621
Alignment:
Q  91 gcaacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    ||||||||||||||||| | ||||  |||  ||||||| |||| | || |||||||||  |||||| ||||||||||||||| |||||||| || |||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtttccatttttagagtgt 8009620  T
Q  189 a 189  Q
    |    
T  8009621 a 8009621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 19427425 - 19427320
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttcta 182  Q
    ||||| ||||||||||||||||| | | |||||||  ||||||||| | || || ||||||||||||     ||||||||||||||||| |||||||  |    
T  19427425 gaatgctagcaacactctctttttaacactctctagcactcactctatcattggatgaaatcaatgtggactccaccactttatgtgggatccattttca 19427326  T
Q  183 aagtgt 188  Q
    ||||||    
T  19427325 aagtgt 19427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 31494214 - 31494295
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    ||||||||||||||||| | | |||||||  ||||||||| |||| || |||||  |||||||||||||| |||||| ||||    
T  31494214 tagcaacactctcttttcaacactctctaacactcactctcttattggatgaaaataatgtatgtcccactactttaagtgg 31494295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 36094098 - 36093993
Alignment:
Q  147 tgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaag 246  Q
    |||||||||||  |||||||||||||| |||||| ||| ||||  ||| |||||||||| |  |||||||||||||| ||  |||||||||| |  ||||    
T  36094098 tgtatgtcccattactttatgtgggtttcatttccaaattgtaaatcc-acattgatttaaaccaataaaagagtgaatgttagagaaagtgtt--aaag 36094002  T
Q  247 agagtgttg 255  Q
    |||||||||    
T  36094001 agagtgttg 36093993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 37719831 - 37719903
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| |||||||| |||||||||||  |||| ||||  |||||||||||||| || |||||||||||||    
T  37719831 gaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 41805917 - 41805873
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccacttt 164  Q
    |||||||||||||| || | |||||||||||||||||||||||||    
T  41805917 actcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 41805887 - 41805959
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| |  |||||||||||||||||  | ||||||||  ||||| |||||||||||| ||||||||    
T  41805887 tacattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctc 41805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 29806232 - 29806201
Alignment:
Q  78 aggaggaatgttagcaacactctcttttgagc 109  Q
    ||||||||||||||||||||||||||||||||    
T  29806232 aggaggaatgttagcaacactctcttttgagc 29806201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 37398928 - 37398994
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||||||||||| |||||   ||||| |||||| |||| ||||||||| || |||||    
T  37398928 attgatttcactcaataaaagattgagtattagagagagtgcttaaaatagagtgttgttagcattc 37398994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 11539489 - 11539420
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||  |||||||||||||||||| ||| | |||| ||||||  |||||||| || ||||||||    
T  11539489 attgatttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcattcctc 11539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 32701513 - 32701578
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||| || | |||||||||||| ||||||||||||||||  |||| |||| ||| |||||    
T  32701513 actcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgta 32701578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 37228673 - 37228613
Alignment:
Q  92 caacactctcttttgagctctct--ctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||||||||| ||||  |||  ||||||| |||||| ||||||||||||||||    
T  37228673 caacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 40535104 - 40535173
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||| || |||||||||||||||||  |||||  |||||| ||||| ||||||| || ||||||||    
T  40535104 attgattttacccaataaaagagtgagtgttagagagggtgctcgaaagatagtgttgttagcattcctc 40535173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 42183075 - 42183003
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||| ||||||||||||||| | ||||||  |  ||| |||||||||| ||||||||||||||||    
T  42183075 gaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgta 42183003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 1110375 - 1110312
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||| |||||||| |||| | | ||  |||||||||||| ||||||||||||||||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgta 1110312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 3804625 - 3804677
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgt-cccaccactttatgtgggtt 173  Q
    |||||||||||| || |||||||||||||||| |||| |||||||||| ||||    
T  3804625 tcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtt 3804677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 6980235 - 6980299
Alignment:
Q  199 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||  |||||||||||||||||| ||||| |||| | ||||| || |||||||| ||||    
T  6980235 ttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 10981582 - 10981626
Alignment:
Q  145 aatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||||||||||| ||||||||| ||||| || |||||    
T  10981582 aatgtatgtcccaccactttgtgtgggttctatttccaatgtgta 10981626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 12989260 - 12989188
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  |||| ||||||||||||  | ||| |||| | ||||| ||||||||||| ||||||||    
T  12989260 tacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcattcctc 12989188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 18511320 - 18511392
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| |  |||||||||||||||||  || || |||| | ||||| ||||||||||| ||||||||    
T  18511320 tacattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgctagcattcctc 18511392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 19953434 - 19953502
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    ||||| |||||||| || ||||| ||||||||| |||||||||||| ||||   ||||||| |||||||    
T  19953434 actcattcttttattggatgaaaccaatgtatgacccaccactttaagtggaacccatttccaaagtgt 19953502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 25666732 - 25666700
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtc 154  Q
    ||||||||||||||| |||||||||||||||||    
T  25666732 tcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 26767872 - 26767944
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  || ||||||||| ||||| ||||| | || | ||||| ||||||||||| ||||||||    
T  26767872 tacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcattcctc 26767944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 29806200 - 29806232
Alignment:
Q  237 tgctcaaaagagagtgttgctaccattcctcct 269  Q
    |||||||||||||||||||||| ||||||||||    
T  29806200 tgctcaaaagagagtgttgctaacattcctcct 29806232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 38464220 - 38464339
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagt 237  Q
    ||||||||||||||||| || ||||||  |||||||| ||||  |||||||| | || ||| |||||| |  |||||| ||||| |||   ||||| |||    
T  38464220 tgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgta-gacccacaatgatttaaaccaataagagagtaagtattagagagagt 38464318  T
Q  238 gctcaaaagagagtgttgcta 258  Q
    | |||||||||||| ||||||    
T  38464319 gttcaaaagagagtattgcta 38464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 13919781 - 13919966
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||| |||||||||||||||||||||  ||||||||  |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttc 13919880  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  13919881 aaagtgtaggtcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 13919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 80 - 265
Target Start/End: Complemental strand, 26703621 - 26703436
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||||  |||||||  ||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  26703621 gaggaatgctagcaacactct--tttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccat 26703524  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcc 265  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  26703523 ttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcattcc 26703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 83 - 263
Target Start/End: Complemental strand, 25428659 - 25428477
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||||||||||||| |||| | |   |||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttc 25428560  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     ||||||||  |||||||||||||| |  |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  25428559 caaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatt 25428477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 122 - 267
Target Start/End: Complemental strand, 19841024 - 19840879
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagt 221  Q
    |||||||||||| || |||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  19841024 tcactcttttattggttgaaatcaatgtatgtcttaccactttatgtgggttccatttccaaagtgtaggtcctatattgatttcacccaataaaagagt 19840925  T
Q  222 gagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||| ||||| ||||||||||| |||||||||||| ||||||||    
T  19840924 gagtgctagagagagtgctcaaaatagagtgttgctagcattcctc 19840879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 258
Target Start/End: Original strand, 45909453 - 45909633
Alignment:
Q  81 aggaatgttagcaacactctcttttgagctctctc--tatgactcactctttt-atcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    ||||||| || ||||||| |||||||||| |||||  ||  | |||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 45909552  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||| ||| |||| ||||||||||||||| || |||||||||||||||||  ||||| |||  |||||||||||||||||||    
T  45909553 ttccaaattgtaggtcctacattgattttacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgcta 45909633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 80 - 227
Target Start/End: Complemental strand, 17354710 - 17354561
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| |||||||||||| ||||||||  ||||||||  ||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||    
T  17354710 gaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctat 17354611  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 227  Q
    ||| |||||||| ||||||||||||||| || |||||||| |||||||||    
T  17354610 ttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagtgc 17354561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 19494521 - 19494374
Alignment:
Q  81 aggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||| ||||| ||||||||||||||  || ||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  179 tctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    |  ||||||||  ||||||||||||||||| ||||||||  |||||||    
T  19494421 ttcaaagtgtagatcctacattgatttcacccaataaaaatgtgagtg 19494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 120 - 267
Target Start/End: Original strand, 14759682 - 14759829
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| || ||||| ||||| |||||||| |||||||||| ||||||  ||||||||||    
T  14759682 actcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttcatccaataaaaga 14759781  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||| || || |||||||||||||||||||||||| ||||||||    
T  14759782 gtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 14759829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 22786149 - 22786303
Alignment:
Q  81 aggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||| |||||||||||||||||||||  ||||||||  ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  179 tctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagaga 233  Q
    || |||||||| ||  ||||||||||||||   |||||||||||| |||||||||    
T  22786249 tccaaagtgtaggttatacattgatttcacctgataaaagagtgattgcaagaga 22786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 27888279 - 27888467
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| |||||||||  ||||||||  |||||| || | || || | ||||||||||||||||||||||||| ||||||||| ||    
T  27888279 gaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaat 27888378  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    || ||||||||| | || ||| |||||| |  |||||| ||||||||||  ||||| |||||||||||||||||||||||| ||||||||    
T  27888379 ttttaaagtgta-gacccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctc 27888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 24539275 - 24539126
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| || | |||||||| |||||||||||||||||| ||| ||||||||| ||| |||||| || |||||||||| ||    
T  24539275 ctctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaac 24539176  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
     |||| | ||||||||||  ||||| ||||  ||||||||||||||||||    
T  24539175 ccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgcta 24539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 26189962 - 26190077
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgc 239  Q
    ||||||||| |||||||||||| | ||||||||| |||||  |||||||| ||||||| ||||||| || |||||||||||||||||  ||||||||||     
T  26189962 aaatcaatgcatgtcccaccacctcatgtgggtttcattttcaaagtgtaggtcctacgttgattttacccaataaaagagtgagtgttagagaaagtgt 26190061  T
Q  240 tcaaaagagagtgttg 255  Q
    ||||||||||||||||    
T  26190062 tcaaaagagagtgttg 26190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 17749722 - 17749871
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| || | |||||||| |||||||||||||||||| ||| || |||||| ||| |||||| || |||||||||| ||    
T  17749722 ctctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgatttaac 17749821  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
     |||| | ||||||||||  ||||| ||||  ||||||||||||||||||    
T  17749822 ccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgcta 17749871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 37549706 - 37549615
Alignment:
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttatc 273  Q
    |||||||| |||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  37549706 aaagtgtaggtcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctctttatc 37549615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 32205076 - 32205181
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||| ||||||||||| ||||||| | |||||| | |||||||||||||| || |||||||||||||||||| |||| ||| ||||||||| ||||    
T  32205076 gaggaatgctagcaacactcacttttgaacactctctct-actcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaattt 32205174  T
Q  180 ctaaagt 186  Q
     ||||||    
T  32205175 ttaaagt 32205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 33008101 - 33008212
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctct--ctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||||| | ||  |||||  |||||||||||||| || |||||||| |||||||||||||||||| ||||||||| ||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctat 33008200  T
Q  178 ttctaaagtgta 189  Q
    ||| || |||||    
T  33008201 ttccaatgtgta 33008212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 19494450 - 19494521
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    |||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||    
T  19494450 tacattgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgctgctagcattcct 19494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 22786220 - 22786149
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    ||||||||||||||  ||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  22786220 tacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 22786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 22189967 - 22190112
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| ||||  |||||||| | ||  || |||||| |     
T  22189967 ctctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgta-gacccgcaatgatttaaa 22190065  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
     ||||||| ||||||||   |||||  ||| ||||||||||||||||    
T  22190066 ccaataaacgagtgagtattagagagggtgttcaaaagagagtgttg 22190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 31959933 - 31959860
Alignment:
Q  145 aatgtatgtcccacc-actttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaa 217  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||| ||||||||||||||||    
T  31959933 aatgtatgtcccacccactttatgtgggttctatttccaaagtgtgggtcctacattaatttcactcaataaaa 31959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 46067943 - 46068079
Alignment:
Q  89 tagcaacactctcttttgagctctctctatga---ctcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaag 185  Q
    ||||||||||||||||| ||| |||||| | |   |||||||  |||| || |||||||||||||||| ||||||||||||||||||||||||||  ||     
T  46067943 tagcaacactctctttttagcgctctctcttaacactcactcccttattggttgaaatcaatgtatgttccaccactttatgtgggttccatttccgaat 46068042  T
Q  186 tgtatgtcctacattgatttcactcaataaaagagtgag 224  Q
    |||| | |  |||||||||| || ||||||||| |||||    
T  46068043 tgtaggac--acattgatttaacccaataaaagtgtgag 46068079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 13919849 - 13919781
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||||||||| ||||    
T  13919849 tacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 248
Target Start/End: Original strand, 14795131 - 14795297
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||| ||||| | |  ||||||||| | ||||| |||||| || ||||||||||||||||||||||| ||| ||| ||||| ||||     
T  14795131 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 14795230  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagag 248  Q
    |||||||||| ||| | | |||||| |   ||||| |||||||||  |||||| |||| |||||||||    
T  14795231 taaagtgtatatcc-ataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagag 14795297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 248
Target Start/End: Original strand, 15242123 - 15242289
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||| ||||| | |  ||||||||| | ||||| |||||| || ||||||||||||||||||||||| ||| ||| ||||| ||||     
T  15242123 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 15242222  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagag 248  Q
    |||||||||| ||| | | |||||| |   ||||| |||||||||  |||||| |||| |||||||||    
T  15242223 taaagtgtatatcc-ataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagag 15242289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 26459068 - 26459150
Alignment:
Q  156 caccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtg 238  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||| ||  ||||||| ||||||| | ||||| ||||    
T  26459068 caccactttatgtgggttccatttctaaagtgtaggtcccacattgtttttacctaataaaaaagtgagttctagagagagtg 26459150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 13919966 - 13919894
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  |||||||||  |||||||| ||||| ||||||||||||||||    
T  13919966 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 13919894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 21963237 - 21963172
Alignment:
Q  154 cccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||||| |||||||||| ||||||||  ||||||||||||||||| ||||||||||    
T  21963237 cccaccattttatgtgagttccatttccaaagtgtagatcctacattgatttcacccaataaaaga 21963172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 25428590 - 25428659
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||| |||||||||||||||| | | | | |||||||||||||||||||||||| |||||    
T  25428590 tacattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattc 25428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 26703551 - 26703621
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||||||||||||| ||||| | ||||||||  |||||||||||| ||||||||    
T  26703551 tacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaa--agagtgttgctagcattcctc 26703621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 253
Target Start/End: Complemental strand, 47822154 - 47821990
Alignment:
Q  91 gcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    ||||||||||||||  |||  ||||||||  |||||||||| ||| |||||||| | ||||   || |||||||||||||||| |||||||| || ||||    
T  47822154 gcaacactctctttcaagcactctctctaacactcactcttctattgggtgaaacccatgtggatctcaccactttatgtgggatccatttccaatgtgt 47822055  T
Q  189 atgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgt 253  Q
        || |||| |||||||| ||||| |||||||||||  ||||| ||||||  |||||||||||    
T  47822054 ggtacccacatggatttcacccaatataagagtgagtgttagagagagtgctagaaagagagtgt 47821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 7775039 - 7775107
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    |||||||||||||| || ||||||||||||||||||||||||||| |||| |||| ||||  |||||||    
T  7775039 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgt 7775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 8073429 - 8073385
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccacttt 164  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  8073429 actcactcttttatcggatgaaatcaatgtatgtcccaccacttt 8073385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 10619574 - 10619433
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||||||||||| |  ||||||||  ||  ||||| || | ||||||||||||| ||| ||||| |||||||||||||||||||    
T  10619574 gaggaatgctagcaacactctcttttgatcactctctctagcacctactctctttt-gggtgaaatcaatatatatcccatcactttatgtgggttccat 10619476  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagt 221  Q
    |   |||||||| ||   |||||||||||||  |||||||||||    
T  10619475 tgacaaagtgtaagt-taacattgatttcacctaataaaagagt 10619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 11824072 - 11824179
Alignment:
Q  84 aatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    ||||||||||||||||  |||| |  ||||||||||  |||||||||||||| || ||||||||||||||||||||||| ||| ||| | ||| ||||      
T  11824072 aatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttc 11824171  T
Q  182 aaagtgta 189  Q
    ||||||||    
T  11824172 aaagtgta 11824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 17354638 - 17354710
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  |||||||||| ||||||  ||||| ||||||||||| |||||||||||| ||||||||    
T  17354638 tacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgctagcattcctc 17354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 31502647 - 31502536
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||  |||||||||||||| || ||||||||| ||||||||||||| ||| |||| |||| ||    
T  31502647 gaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaat 31502548  T
Q  178 ttctaaagtgta 189  Q
    ||  ||||||||    
T  31502547 tttcaaagtgta 31502536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 33008173 - 33008101
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| ||||||||  |||||||||||||||||| ||||| |||| ||||||| ||||||||||| ||||||||    
T  33008173 tacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcctc 33008101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 48374618 - 48374510
Alignment:
Q  82 ggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||||| ||||||||||| ||||||| | |||||||  |||||||||||||| |  || |||  ||| ||||||||||||||| | ||||||| |||||     
T  48374618 ggaatgctagcaacactcacttttgaacactctctagtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttcc 48374519  T
Q  182 aaagtgtat 190  Q
    |||||||||    
T  48374518 aaagtgtat 48374510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 19423014 - 19422936
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccacc 159  Q
    ||||||||||||||||| ||||| | |  ||||||||| ||||||||||| || || ||||||||||||||||||||||    
T  19423014 gaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccacc 19422936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 255
Target Start/End: Original strand, 34280926 - 34281096
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaa 183  Q
    ||||||||||| |||||||||  | |||||| ||  ||| |||  ||||||||||||||| |||||||||  |||||||||||||| |||  ||||  ||    
T  34280926 aatgttagcaaaactctctttaca-ctctctttaatacttacttatttatcgggtgaaattaatgtatgtttcaccactttatgtgagttttattttcaa 34281024  T
Q  184 agtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    |||||  ||||||||||| ||| ||  |||||||||   ||||  ||||| | || ||||||||||||||||    
T  34281025 agtgtgagtcctacattggttttacctaataaaagaacaagtgttagagagaatgttcaaaagagagtgttg 34281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 19840879 - 19840948
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaat 147  Q
    |||||||| |||||||||||| ||||||||  ||||||||  |||||||||||||| |||||||||||||    
T  19840879 gaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 23934021 - 23934083
Alignment:
Q  196 acattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||||| || |||||||||||| ||||| ||| |||||||| |||||||||||||||||    
T  23934021 acattgattttacccaataaaagagtaagtgctagacaaagtgcttaaaagagagtgttgcta 23934083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 11692220 - 11692287
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||| || |||||||||||||||||| |||||||| ||| ||||| ||||  ||||||||    
T  11692220 tcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgta 11692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 12271028 - 12271075
Alignment:
Q  123 cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||    
T  12271028 cactcttttatcagatgaaatcaatgtatgtcccaccactttgtgtgg 12271075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  82 ggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||| ||||||||||||||| |||||  ||||||||  |||||||||||||| ||||||||| ||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 272
Target Start/End: Complemental strand, 32205145 - 32205071
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctccttat 272  Q
    |||||||||||||  ||||||||||||||||   ||||| |||| ||||||| ||||||||||| |||||||| ||||    
T  32205145 tacattgatttcatccaataaaagagtgagt---agagagagtgttcaaaagtgagtgttgctagcattcctctttat 32205071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 6442193 - 6442346
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||| ||||| || ||||| |  |||||||||||||||| |||||| ||| || || ||| ||||  |||||||| | || ||| |||||| |     
T  6442193 ctctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgta-gacccacaatgatttaaa 6442291  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     ||||||||||||||||   | ||| |||| |||||||| |||||||||| ||||    
T  6442292 ccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttgctaacatt 6442346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 14759709 - 14759660
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaaga 247  Q
    |||||||||||||||||||||||||||||| || || ||| |||||||||    
T  14759709 attgatttcactcaataaaagagtgagtgctagggagagtactcaaaaga 14759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 12263588 - 12263508
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||| |  |||||||||||||| || ||||||||||||||||| |||||| ||| || || ||||  ||||||||    
T  12263588 ctctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgta 12263508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 22190008 - 22189936
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  |||||||||||||||||| ||||| |||| | ||||  ||||||| ||| ||||||||    
T  22190008 tacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcctc 22189936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 31959968 - 31960028
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    |||||| ||||||  |||||||  ||||||||| ||||| |||||||||||||||||||||    
T  31959968 tacattaatttcatccaataaataagtgagtgctagagagagtgctcaaaagagagtgttg 31960028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 45909525 - 45909453
Alignment:
Q  195 tacattgatttcactcaataaaa-gagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    |||||||||||||| |||||||| |||||| ||| || || ||||||||||||| ||||||| || |||||||    
T  45909525 tacattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgttgatagcattcct 45909453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 45909633 - 45909570
Alignment:
Q  89 tagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||||||||||   |||||||||  |||||||||||||| |||| |||||||||||    
T  45909633 tagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 46994486 - 46994366
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagt 237  Q
    ||||||||||||||| |||||||||||| |||   |||||||| |||||||  | || ||  |||||| |  |||||||| ||||||||  ||||| ||     
T  46994486 tgaaatcaatgtatgacccaccactttaagtgatatccatttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagtgttagagagagc 46994387  T
Q  238 gctcaaaagagagtgttgcta 258  Q
    | | |||||||||||||||||    
T  46994386 gttaaaaagagagtgttgcta 46994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 41873462 - 41873541
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    |||||||||  ||||||| |||||| ||||||||   ||||  ||| || ||||||||||||||||||||||||| ||||    
T  41873462 ctctctctaacactcacttttttattgggtgaaactcatgtgagtctcatcactttatgtgggttccatttctaatgtgt 41873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 42887769 - 42887683
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttca 207  Q
    |||| ||||||||| | |||||| |||||| | | | ||||||||||||| ||| |||||| |||| |||||||||||||| ||||||    
T  42887769 actcgctcttttattgagtgaaaccaatgtttatactaccactttatgtgtgtttcatttc-aaagagtatgtcctacattaatttca 42887683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 46517293 - 46517399
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttcta 182  Q
    ||||| ||||||||||| ||||| | | |||||||  |||||||| ||||| || | |||||||||||| |||||||| | | || |||||| ||||  |    
T  46517293 gaatgctagcaacactcactttttaacactctctagcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttca 46517392  T
Q  183 aagtgta 189  Q
    |||||||    
T  46517393 aagtgta 46517399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 6580135 - 6580188
Alignment:
Q  214 aaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| ||||||||||||| | |||| | ||||| ||||||||||||||||||||    
T  6580135 aaaaaagtgagtgcaagaaagagtgttgaaaagtgagtgttgctaccattcctc 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 10619506 - 10619574
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| ||| || |||||  |||| ||||| |||| ||||||||||||||||||| ||||||||    
T  10619506 attgatttcacccaa-aagagagtaggtgctagagagagtgatcaaaagagagtgttgctagcattcctc 10619574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 14759829 - 14759757
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  ||||| |||  || ||||||||||| || |||||| ||||||    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 19422945 - 19423014
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||  |||| ||||||||||||  ||||| |||| | ||||| ||||||||||| |||||    
T  19422945 tacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctaacattc 19423014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 25428477 - 25428545
Alignment:
Q  84 aatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||| ||||||||||||||||||||  |||||| ||  |||||||||||||| || | |||||||||||    
T  25428477 aatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 37549621 - 37549693
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  || ||||||  ||| |||||||||| || |||| ||||||||    
T  37549621 gaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgta 37549693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 42887740 - 42887793
Alignment:
Q  196 acattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagaga 249  Q
    |||||| |||||||||||||||||| |||||| | ||| |||| ||||||||||    
T  42887740 acattggtttcactcaataaaagagcgagtgctaaagagagtgatcaaaagaga 42887793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 2520698 - 2520630
Alignment:
Q  199 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||| |||||||||||||||||   |||| |||| | ||||||||||||| ||| || |||||    
T  2520698 ttgatttcacccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcctc 2520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 11824140 - 11824072
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||  |||||||||||||||||| ||||| || | | ||||  ||||||||||| ||||    
T  11824140 tacattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 27888351 - 27888279
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| |  |||| | || |||||||  ||||| |||||||||||| ||||||||||| ||||||||    
T  27888351 tacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctc 27888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 27888467 - 27888431
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctct 116  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  27888467 gaggaatgctagcaacactctcttttgagcactctct 27888431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 31502579 - 31502647
Alignment:
Q  199 ttgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||  |||||||||||||||||  ||||| | || | ||||| ||||||||||| ||||||||    
T  31502579 ttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctc 31502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 13069938 - 13070126
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctc--tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||| || |||||||||||||| |  ||||||  |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  13069938 gaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccat 13070036  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||  |||||||| ||||||||||||||| ||||||||||||||||||||  ||||||| || ||||||||||||||||||| || |||||    
T  13070037 tttcaaagtgtaggtcctacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagcactcctc 13070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 44832460 - 44832649
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| || ||||| ||||||||||||  ||| ||||| ||||||| |||||| ||||||||| |||||||||||||||| ||||||||| ||||||    
T  44832460 gaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgtatgtcccaccattttatgtggattccat 44832559  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| |||||| | |||||||||||||||||| |||||||| | |||||||  |||| |||||||||||||||||||||||| ||||||||    
T  44832560 ttccaaagtgcaggtcctacattgatttcacccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctc 44832649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 42862604 - 42862415
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctct--ctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||  ||||||||||||||||| ||  |||||  ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42862604 gaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42862505  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||  |||||||    | || ||||||||||| |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||    
T  42862504 tttcaaagtgtgaaacataaattgatttcacccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctc 42862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 84 - 264
Target Start/End: Original strand, 37315564 - 37315743
Alignment:
Q  84 aatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||| |||||||||||||||||||||  ||||||||  ||||||||||||   ||||||||||||||||||||||||||||||||||  ||| |||||      
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactctttt---gggtgaaatcaatgtatgtcccaccactttatgtaagtttcattttc 37315660  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||| ||| || ||||||||||||||| |||||||||||||||||| |  || ||||||||||| |||||||||||| |||||    
T  37315661 aaagcgtaggttctacattgatttcacccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcattc 37315743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 51206082 - 51206220
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||| |||||  | |||||||||||||||||||| ||||||||||| ||| |||||  ||| |||| |||||||||||||||||| ||||||||||    
T  51206082 actcactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaaaga 51206181  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  51206182 gtgagtgctagagagagtgctcaaaagagagtgttgcta 51206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 84 - 264
Target Start/End: Complemental strand, 2187992 - 2187811
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgact--cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||||||| ||||||||||||||||| |||||| |  ||  | ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||      
T  2187992 aatgttaggaacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggtt-cattttc 2187894  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||| |||| |||||| |||||| |||||||| | ||||||  ||||| |||||||||||| ||||||||||| |||||    
T  2187893 aaagtgtaggtcccacattgttttcacacaataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgctagcattc 2187811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 16178590 - 16178726
Alignment:
Q  89 tagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    |||||| ||||||||||| ||  ||||||||  ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16178590 tagcaatactctcttttgtgcactctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagt 16178688  T
Q  187 gtatgtcctacattgatttcactcaataaaagagtgag 224  Q
    ||| || ||||||||||||||  |||||||||||||||    
T  16178689 gtaggttctacattgatttcatccaataaaagagtgag 16178726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 84 - 263
Target Start/End: Original strand, 39016664 - 39016845
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgactc--actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttct 181  Q
    |||| |||||||| |||||||| | | |||||||| || |  ||| |||||| || ||||||||||||||||||||||| |||| ||||||||||||||     
T  39016664 aatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttcc 39016763  T
Q  182 aaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||||    |||||||||||| ||  ||||||||||| ||||| ||||| |||| ||||||||||||||||||| ||||    
T  39016764 aaagtgtagtatctacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 2088840 - 2088700
Alignment:
Q  88 ttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaag 185  Q
    ||||||||||||| |||||||  |||||||||  ||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  2088840 ttagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaag 2088741  T
Q  186 tgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    ||||  |||| |||| |||| |   ||||||||||||||||    
T  2088740 tgtagatcctgcattaatttaagctaataaaagagtgagtg 2088700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 30867073 - 30866930
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| || | |||| |||||||||||||||||||||||||||||||||||  ||||||||  ||| |||||| ||||||  ||||||| |    
T  30867073 actcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcacctaataaaaaa 30866974  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     ||||||| ||||| |||| | ||||||||| ||||||| ||||    
T  30866973 atgagtgctagagagagtgtttaaaagagagcgttgctagcatt 30866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 263
Target Start/End: Original strand, 43771126 - 43771307
Alignment:
Q  83 gaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    ||||| ||||||||||| ||||||| |  |||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||| ||||     
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaatttt 43771225  T
Q  181 taaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     |||||||| | || ||| |||||| |  |||||| |||||||||   | |||  ||| ||||||||||| ||||||| ||||    
T  43771226 caaagtgta-gacccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgctagcatt 43771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 25719285 - 25719123
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    |||||||||||| ||||   ||||||| |  ||||||||| |||| || |||||||||||||||||||||||||||||||||||| |||||| ||| |||    
T  25719285 tagcaacactcttttttacactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgt 25719186  T
Q  189 atgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagt 251  Q
    | | || ||| |||||| || |||| | |||||||||   ||||||| || ||||||||||||    
T  25719185 aggacccacaatgatttaacccaatcagagagtgagtattagagaaattgttcaaaagagagt 25719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 47237923 - 47237734
Alignment:
Q  81 aggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||| || |||||||||||||||| |  ||||||||  | |||||||||||| || |||||||||| |||||||||||||||||| |  ||| ||||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  179 tctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagaga----aagtgctcaaaagagagtgttgctaccattc 264  Q
    |  |||||||| || ||||||  ||||||  |||||||||||||||||| |||||     | ||||||||||||||||||| || |||||    
T  47237823 ttcaaagtgtaggttctacatgaatttcatccaataaaagagtgagtgctagagagaattaatgctcaaaagagagtgttgttagcattc 47237734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 258
Target Start/End: Original strand, 19447173 - 19447308
Alignment:
Q  123 cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtg 222  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||  ||| || | | || ||| |||||| ||||||| | ||||||    
T  19447173 cactctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtg 19447272  T
Q  223 agtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||   | ||| |||| |||||||||||||||||||    
T  19447273 agtattaaagagagtgttcaaaagagagtgttgcta 19447308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 20225524 - 20225413
Alignment:
Q  78 aggaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||||| ||||||||||| ||||||| | |||||||  |||||||||||||| || || |||| ||| ||||||||||||||| ||||||||| ||    
T  20225524 aggaggaatgctagcaacactcacttttgaacactctctagcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  178 ttctaaagtgta 189  Q
    ||| ||||||||    
T  20225424 ttccaaagtgta 20225413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 41278759 - 41278658
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| |||| |||| ||||||||||| |||||||||||||||||||||||  ||| |||  |||||||||| || |||| ||||||||||    
T  41278759 actcactcttttattgggtaaaattaatgtatgtcctaccactttatgtgggttccattttcaaaatgttggtcctacattcatatcacccaataaaaga 41278660  T
Q  220 gt 221  Q
    ||    
T  41278659 gt 41278658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 42862532 - 42862604
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||  || ||||||||    
T  42862532 tacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttattagcattcctc 42862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 8108984 - 8109137
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||| | ||| |||  |||| ||||  |||||||| | || ||| |||||| |     
T  8108984 ctctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgta-gacccacaatgatttaaa 8109082  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     |||||| | |||||||   ||||| |||| ||||||||||||||||||| ||||    
T  8109083 ccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 8109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 722185 - 722330
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  ||||||| |||||| || ||||||||| ||||||||||||||||| |||  |||| |||| ||||||||| | || ||| |||||| |     
T  722185 ctctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaatgatttaaa 722283  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
     |||||| |||||||||   ||||| |||| |||||||| |||||||    
T  722284 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 223
Target Start/End: Original strand, 40812034 - 40812179
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||| ||| |||||||||||| |||||| |  ||||||||  |||||||||||||| ||||||||||||| | | || ||||| || | ||||||| |||    
T  40812034 gaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaatatttatcacaccatttaacgtgggtttcat 40812133  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtga 223  Q
    ||| |||||||| ||| |||||| |||| |  |||||||| |||||    
T  40812134 ttccaaagtgtaggtcatacattaattttatccaataaaaaagtga 40812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 40812103 - 40812034
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||| |||||||||||||||||| ||||| |||| |||||| |||||||||||| ||| ||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcatacctc 40812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 8109025 - 8108957
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| | ||||| ||||||||||| ||||    
T  8109025 tacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 13070009 - 13069938
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||||||||| || ||| ||||||||    
T  13070009 tacattgatttcac-caataaaagagtgagtgctagagagtgtgctcaaaagagagtattcctagcattcctc 13069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 51206220 - 51206157
Alignment:
Q  89 tagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||    
T  51206220 tagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 2088776 - 2088839
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||||||||||||||| ||||||||||||  ||||| ||| ||||||| ||||||||||||    
T  2088776 tacattgatttcactcaattaaagagtgagtgttagagagagtactcaaaaaagagtgttgcta 2088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 16178652 - 16178590
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||||    
T  16178652 tacattgatttcactcaataaa-gagtgagtgctagagagagtgcacaaaagagagtattgcta 16178590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 24938556 - 24938414
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||| || || |||||||||||||||||||| ||| | ||| ||| |||| ||||||||| | |||||| |||||| |  |||||| |||    
T  24938556 actcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgta-gacctacaatgatttaaaccaataagaga 24938458  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    || |||   |||||||||| | |||||| | |||||||| ||||    
T  24938457 gtaagtattagagaaagtgttgaaaagataatgttgctagcatt 24938414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 20454568 - 20454714
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  ||||||||||||||  | | ||||||||||||||||   |||||| ||| ||||| ||||  ||||||||  ||| ||| |||||| |     
T  20454568 ctctctctagcactcactcttttattagataaaatcaatgtatgtcc--acactttgtgttggttcaattttcaaagtgtagatcc-acaatgatttaaa 20454664  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||| ||||||||||  ||||| |||| |||||||||| ||||||||    
T  20454665 tcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgcta 20454714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 5545642 - 5545755
Alignment:
Q  145 aatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaa 244  Q
    ||||||||||||||||||||||||||| |||||||  ||| |||| | || |||||||||| |   ||| ||| ||| |||   ||||| |||| |||||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaa 5545741  T
Q  245 agagagtgttgcta 258  Q
    ||||||||||||||    
T  5545742 agagagtgttgcta 5545755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 21776997 - 21776848
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  | |||||||||||| || | |||||||||||||||| |||||||||||||| ||  ||||| ||| |||||| || | || ||||| |     
T  21776997 ctctctctaacattcactcttttattggataaaatcaatgtatgtcctaccactttatgtggattttatttccaaaatgtatgacccatatcgatttaat 21776898  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    || || | ||| ||||||  ||||| ||||   |||||||||||||||||    
T  21776897 tcgatgagagaatgagtgttagagagagtgtcaaaaagagagtgttgcta 21776848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 40991772 - 40991593
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    |||||||| ||||||||||| ||||| | |  ||||||||| ||||||||||| || || |||||||||| ||||||||||| | || | | ||  | ||    
T  40991772 gaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactat 40991673  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    |||| ||||||| | || ||| |||||| |  ||||||||||||||||   ||||| |||| |||||| | ||||||||||    
T  40991672 ttctgaagtgta-gacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttgcta 40991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 43771195 - 43771126
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattc 264  Q
    |||||||||||||  ||||||||||||||||   ||||| |||| ||||||| |||||||||||||||||    
T  43771195 tacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattc 43771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 754721 - 754586
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| |||||| || |||| |||| ||||||||||||||||| |||  |||| |||| ||||||||| | || ||| |||||| |  |||||| |||    
T  754721 actcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaatgatttaaaccaataagaga 754623  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgc 256  Q
    ||||||   ||||| |||| |||||||| ||||||||    
T  754622 gtgagtattagagagagtgttcaaaagaaagtgttgc 754586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 41153350 - 41153270
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||| ||| ||| |||||||||| || ||||||  ||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  41153350 ctctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgta 41153270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 42862415 - 42862490
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgtatgt 153  Q
    |||||||| ||||||||||||||||||||  || | ||||  |||||||||||||| ||||||||||||| |||||    
T  42862415 gaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgt 42862490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 47237855 - 47237923
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcct 266  Q
    ||||||||||  |||||||||||||| ||| ||||| |||| |||||||||||||||| || |||||||    
T  47237855 attgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattcct 47237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 46242121 - 46242026
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    ||||||| |||||||| ||||| | | |||||||  |||||| ||||||| || |||||||| |||||||||||||| ||| ||| ||||| ||||    
T  46242121 aatgttatcaacactcactttttaacactctctagaactcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattt 46242026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 2187926 - 2187992
Alignment:
Q  197 cattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||| ||||||||||| ||  || ||||| |||||||||||||||||||| ||| ||||    
T  2187926 cattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgttcctaacatt 2187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 37315629 - 37315564
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||| |||   |||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  37315629 tacattgatttcacccaa---aagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 37315564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 37315743 - 37315674
Alignment:
Q  83 gaatgttagcaacactctcttttgagctctctc--tatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||| |||||||||||| |||||||| |||||  ||  |||||||||||||| ||||||||||||||||    
T  37315743 gaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgta 37315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 49739033 - 49738959
Alignment:
Q  152 gtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtg 226  Q
    |||||||||| |||||||||  | ||||| |||||||||| || |||| ||||||||  ||||||||||||||||    
T  49739033 gtcccaccacattatgtgggaccaatttccaaagtgtatgacccacatggatttcaccaaataaaagagtgagtg 49738959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 20225467 - 20225525
Alignment:
Q  210 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcctt 270  Q
    |||||||||||||||||| |||||  ||| ||||||| ||||||||||| |||||||||||    
T  20225467 caataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattcctcctt 20225525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 44832649 - 44832577
Alignment:
Q  80 gaggaatgttagcaacactctcttttgag--ctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    |||||||| ||||||||||||||||||||  ||||||| |  ||||| | |||||| ||||||||||||||||    
T  44832649 gaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 52671869 - 52671938
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||| |||||||||||||||| |||||||  |||| |||| |||||||||    
T  52671869 actcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgta 52671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 22592343 - 22592403
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    |||||||||||||| || |||||| ||||| |||||||||||||| ||| ||||| |||||    
T  22592343 actcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctatttc 22592403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 29699528 - 29699588
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    |||||||||||||| || ||||||||||  ||||||||||||||| ||| ||||| |||||    
T  29699528 actcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctatttc 29699588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 35179653 - 35179716
Alignment:
Q  125 ctcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||| ||||||||||||||||  ||| |||||| |||||||| ||||| ||||||||    
T  35179653 ctcttttatcggatgaaatcaatgtatgtttcactactttacgtgggttcaatttc-aaagtgta 35179716  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 268
Target Start/End: Original strand, 39471200 - 39471343
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtga 223  Q
    ||||||||||  | ||||||||||||||||||||||||||| ||| ||||| || |  |||||||| | || ||| |||||| |  |||||| |||||||    
T  39471200 actcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgta-gacccacaatgatttaaaccaataagagagtga 39471298  T
Q  224 gtgcaagagaaagtgctcaaaagagagtgttgctaccattcctcc 268  Q
    ||   ||||| | || | |||||||||||||| || |||| ||||    
T  39471299 gtattagagagaatgtttaaaagagagtgttgttagcattactcc 39471343  T

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Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 258
Target Start/End: Complemental strand, 48339514 - 48339344
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    ||||||||||| || |||||| |||||| | ||  ||||||| |||| ||   |||||||||||||| |||||||||| ||||||||| ||||  ||||     
T  48339514 tagcaacactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagc 48339415  T
Q  187 gtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||| | || | | || ||| |  |||||||||||||  ||  |||||||||||||||||  |||||||||||    
T  48339414 gta-gacccataatgctttaaaccaataaaagagtggatgttagagaaagtgctcaaaaacgagtgttgcta 48339344  T

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Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 50571861 - 50571972
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    ||||||||||||||||| || ||||| | |  ||||||||  ||| ||||||||||  | ||||||||||||||| |||| || ||||||||| ||| ||    
T  50571861 gaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaat 50571960  T
Q  178 ttctaaagtgta 189  Q
    ||  ||||||||    
T  50571961 tttcaaagtgta 50571972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 24834625 - 24834763
Alignment:
Q  128 ttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 227  Q
    |||||| || || |||||||||||||||||||| ||| ||||||||| ||||  |||||||| | || ||| | |||| |  |||||| ||||||| |      
T  24834625 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgta-gacccacaataatttaaaccaataagagagtgactat 24834723  T
Q  228 aagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
     ||||| || | | ||||||||||||||||| ||||||||    
T  24834724 tagagagagagtttaaaagagagtgttgctagcattcctc 24834763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 34129552 - 34129473
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    |||||||||  |||||||||| ||| || ||| |||||||||| |||||||||||| |||| |||| ||||  |||||||    
T  34129552 ctctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgt 34129473  T

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Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 254
Target Start/End: Original strand, 19484532 - 19484657
Alignment:
Q  128 ttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgc 227  Q
    |||||| ||||||||||||||||||| |||||||||||||   | | |||||  ||||| || |||| ||||| |||| |  |||||||| ||||| ||     
T  19484532 ttttattgggtgaaatcaatgtatgt-ccaccactttatgcaagcttcattttcaaagtataggtcccacattaatttaaaccaataaaatagtgaatga 19484630  T
Q  228 aagagaaagtgctcaaaagagagtgtt 254  Q
     ||| | ||| ||||||||||||||||    
T  19484631 tagatagagttctcaaaagagagtgtt 19484657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 38636376 - 38636445
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||||||||||  | | ||||||||||||||| ||| |||||||||||||   |||| |||||||||    
T  38636376 actcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgta 38636445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 39016845 - 39016777
Alignment:
Q  84 aatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgta 150  Q
    ||||||||||||||||||||||||   |||||||||  ||| ||||||||||  ||| |||||||||||    
T  39016845 aatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 40991703 - 40991772
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||||  |||| ||||||||||||  ||||| |||| | ||||| ||||||||||| ||||||||    
T  40991703 attgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctc 40991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 48608077 - 48608165
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgac--tcactcttttatcgggtgaaatcaatgtatgtcccaccactttat 166  Q
    |||||||| || |||||||||||||| ||  || ||| | ||  |||||||||||| || | |||| ||||||||||||||||||||||    
T  48608077 gaggaatgctaacaacactctcttttaagtactttctttaacattcactcttttattggataaaattaatgtatgtcccaccactttat 48608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 49077308 - 49077357
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||| ||| |||||||||||||||| ||||||||| |||| |||||||||    
T  49077308 aaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgta 49077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 50481686 - 50481617
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||||| || ||||||||| ||||||| ||||||||| | ||| ||| ||||  ||||||||    
T  50481686 actcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgta 50481617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 28304139 - 28304055
Alignment:
Q  138 tgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtg 222  Q
    ||||||||||| |||||||||||||||  ||||| |||||||  ||||||| ||  | || ||||||| | ||||||||| ||||    
T  28304139 tgaaatcaatgcatgtcccaccacttttagtggggtccattttcaaagtgtgtgatccaccttgatttaagtcaataaaaaagtg 28304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 34129511 - 34129583
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||||| |||  ||||| |||||||||||| ||||| |||  | ||||| || |||||||||||||||||    
T  34129511 tacattgatctcatccaatagaagagtgagtgctagagagagttttgaaaagtgaatgttgctaccattcctc 34129583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 44832532 - 44832460
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||| ||||||| |||||||| ||||||||  ||| | | ||||||||||||| ||||| || ||||||||    
T  44832532 tacattaatttcacccaataaaaaagtgagtgatagaaagaatgctcaaaagagaatgttgttagcattcctc 44832460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 49682930 - 49682886
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttat 166  Q
    ||||| ||||||||| |||||||||||||| || |||||||||||    
T  49682930 tcacttttttatcggatgaaatcaatgtatatctcaccactttat 49682886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 50164423 - 50164503
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  |||||||| ||||| || | |||||||||||| |||||||| ||| || |||||| ||||  ||||||||    
T  50164423 ctctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgta 50164503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 50571933 - 50571861
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||   ||||||||||| ||||| ||||| |||| | ||||| || |||||||| ||||||||    
T  50571933 tacattgatttcatctaataaaagagtaagtgctagagagagtgttgaaaagtgactgttgctaacattcctc 50571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 35689490 - 35689651
Alignment:
Q  93 aacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtat 190  Q
    |||||||||||||||||  ||||||||  ||||||| |||||| || |||||||||||||||||||||||||||||||| |||||||||  ||||||||     
T  35689490 aacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaa 35689589  T
Q  191 gtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtg 252  Q
    |||| |||||| |||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  35689590 gtcccacattgttttcacccaataaaaaagtgagtgctagagagagtgctcaaaagagagtg 35689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 89 - 256
Target Start/End: Original strand, 1205833 - 1206002
Alignment:
Q  89 tagcaacactctcttttgagctctctctatg--actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagt 186  Q
    ||||||||||||||||||||| |||||| |   ||||||||||||||  ||| |||| |||||||||| ||||||||||| ||||||| ||||| |||||    
T  1205833 tagcaacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttccaaagt 1205932  T
Q  187 gtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgc 256  Q
    ||| ||| ||||||||||||||||||||||||||||||||| | ||| |||| |||||| ||||||||||    
T  1205933 gtaggtcttacattgatttcactcaataaaagagtgagtgctaaagagagtgttcaaaatagagtgttgc 1206002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 7599605 - 7599425
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    ||||||||||||||||||||| |||||| |  ||||||||  ||  |||||||||| || |||||||||||||| ||||| ||||||||||||||||| |    
T  7599605 gaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttcctt 7599506  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||| |||||||| ||||||||||||||| ||||||||||| ||||||||  ||| | | ||||||||| ||||||||||||    
T  7599505 ttccaaagtgtaggtcctacattgattttactcaataaaaaagtgagtgttagaaagaatgctcaaaaaagagtgttgcta 7599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 80 - 238
Target Start/End: Original strand, 33417680 - 33417839
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatg-actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    |||||||| || ||||||| |||||||||  |||||| || ||||||   |||||  ||||||||||||| |||| ||||||||||||||||||| ||||    
T  33417680 gaggaatgctaacaacactttcttttgagtactctctctgcactcacatctttattaggtgaaatcaatgcatgttccaccactttatgtgggtttcatt 33417779  T
Q  179 tctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtg 238  Q
    || |||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  33417780 tccaaagtgtaggtcctacattaatttcactcaataaaagagtgagtgctagagagagtg 33417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 6387564 - 6387747
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaa 183  Q
    |||| ||||||||||||||||||  | |||||||  |||||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||| ||    
T  6387564 aatgctagcaacactctcttttggacactctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaa 6387663  T
Q  184 agtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||| || | || |||||| ||| || |||||| ||| ||||||  ||||| ||||  |||||| || |||||||| || |||||    
T  6387664 agtatacgacccacattgttttaacccaataagagaatgagtgttagagagagtgtccaaaagggattgttgctagcaatcctc 6387747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 28212039 - 28211885
Alignment:
Q  108 gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttca 207  Q
    ||||||||||  |||||||  ||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||||| || |||||||||||||||||    
T  28212039 gctctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagtataggtcctacattgatttca 28211940  T
Q  208 ctcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    | ||||||||  |||| ||  ||| | | |||||||||||||||||||||| ||||    
T  28211939 cccaataaaa-tgtgaatgttagaaataatgctcaaaagagagtgttgctaacatt 28211885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 13407507 - 13407318
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    ||||||||| ||||||||||| |||||  |  ||||||||  ||| ||| |||||| || | ||||||||||||||||||||| |||| |||||||| ||    
T  13407507 gaggaatgtcagcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctat 13407408  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||  |||||||||| || |||||||||| || |||| | ||| ||||||  ||||| |||| ||||||||||||||||||| ||||||||    
T  13407407 tttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcattcctc 13407318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 43026299 - 43026412
Alignment:
Q  89 tagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    |||||||| |||||||| | | |||||||  ||||||| ||||||  ||| ||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  43026299 tagcaacattctcttttaaacactctctagcactcacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaagtgt 43026398  T
Q  189 atgtcctacattga 202  Q
    | ||||||||||||    
T  43026399 aggtcctacattga 43026412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 34303562 - 34303432
Alignment:
Q  137 gtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaag 236  Q
    |||||||||||||||||| ||||||| ||||||| ||| ||||  |||||||| ||| |||||||||||||| |||||||||||| ||||| |||||       
T  34303562 gtgaaatcaatgtatgtctcaccactctatgtggcttcgattttcaaagtgtaggtcttacattgatttcacccaataaaagagttagtgctagagagga 34303463  T
Q  237 tgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| |||||||  |||||||| | ||||||    
T  34303462 tgcttaaaagaggatgttgctagctttcctc 34303432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 267
Target Start/End: Complemental strand, 23143002 - 23142812
Alignment:
Q  84 aatgttagcaacactctcttttgagctctctct--atgactcactcttttatcgggtgaaatcaatgtatgtcccac--------cactttatgtgggtt 173  Q
    |||||||| |||||||| |||||||| ||||||  |  ||| ||| |||||| ||||||||||||| ||||| ||||        |||||||||||||||    
T  23143002 aatgttaggaacactcttttttgagcactctctcaagcacttacttttttattgggtgaaatcaatttatgttccacataaccaccactttatgtgggtt 23142903  T
Q  174 ccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    ||||||| ||||| || || | |||||| |||||| |||||||| | ||| ||| ||||  |||||||||||||||||||||||| ||||||||    
T  23142902 ccatttccaaagtctaggttccacattgttttcacccaataaaa-aatgaatgctagag--agtgctcaaaagagagtgttgctagcattcctc 23142812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 32072125 - 32072205
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  |||||||||||||| || |||||| |||||||||||||||||||| ||||||||| |||| |||||||||    
T  32072125 ctctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgta 32072205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 255
Target Start/End: Complemental strand, 24056108 - 24055932
Alignment:
Q  80 gaggaatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 177  Q
    ||||||| | |||||||||| ||||| |  ||||||| ||  |||| |||||||||| | |||||| |||||||||||||||||||| |||  |||| ||    
T  24056108 gaggaatatcagcaacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaat 24056009  T
Q  178 ttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||  |||||||| | || ||| | |||| |  |||||| ||||||||||  |||||||||| ||||||||||||||||    
T  24056008 tttcaaagtgta-gacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 8914768 - 8914864
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagc--tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttc 174  Q
    |||||||| ||||||||||| |||||||||  ||||||||  ||||||||||| || || | ||| ||||||||||||||||||||| |||||||||    
T  8914768 gaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttc 8914864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 34861368 - 34861269
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||| ||||| | ||| ||||| | | |||||||  |||||||||||||| || ||||||||||||||||||||||||||| ||| ||||| ||||    
T  34861368 gaggaatgctagcacctctcacttttcaacactctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattt 34861269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 263
Target Start/End: Complemental strand, 1977325 - 1977172
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcac 208  Q
    |||||||||  |||||||||| | | || |||||||||||||||||| |||||||| ||||||||| ||||  ||||||||  ||| ||| |||||| |     
T  1977325 ctctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatcc-acaatgatttaaa 1977227  T
Q  209 tcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
     ||||||||||||||||   |||||  ||| ||||||||| ||||| ||| ||||    
T  1977226 ccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgttactagcatt 1977172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 12212230 - 12212128
Alignment:
Q  156 caccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||||||||||||||||  ||||||| |||||||| | || ||||||||||||| ||| |||||||||| ||  ||||| | || | ||||||||||||||    
T  12212230 caccactttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttg 12212131  T
Q  256 cta 258  Q
    |||    
T  12212130 cta 12212128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 12456658 - 12456556
Alignment:
Q  156 caccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||||||||||||||||  ||||||| |||||||| | || ||||||||||||| ||| |||||||||| ||  ||||| | || | ||||||||||||||    
T  12456658 caccactttatgtgggacccatttccaaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttg 12456559  T
Q  256 cta 258  Q
    |||    
T  12456558 cta 12456556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 23685170 - 23685239
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  23685170 actcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgta 23685239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 25915088 - 25915175
Alignment:
Q  140 aaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt--atgtcctacattgatttcactcaataaaagagtgagt 225  Q
    |||||||||||||||| || ||||||| ||||||||||||  |||||||  | || | ||||||||||||| ||||||||||||||||    
T  25915088 aaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagt 25915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 35689549 - 35689481
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||||||||||  |||||||| ||||||||| ||||| ||||||||||||||||||||  |||||||    
T  35689549 tacattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgttcttaccatt 35689481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 16441948 - 16441842
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||||||||||  || ||||||||||||  |||||| ||| ||||||||| ||||||||  || | |    ||||||| |||||||||||||||||||    
T  16441948 actcactcttttactggatgaaatcaatgtgggtcccatcaccttatgtgggatccatttccgaattttggaacctacatagatttcactcaataaaaga 16441849  T
Q  220 gtgagtg 226  Q
    |||||||    
T  16441848 gtgagtg 16441842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 43506535 - 43506628
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttc 174  Q
    |||||||| ||||||||||| ||||||| | |||||||  ||||||| |||||| || |  ||||||||||||| |||||||||| |||||||||    
T  43506535 gaggaatgctagcaacactcacttttgaacactctctaacactcact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttc 43506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 10197859 - 10197762
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaa 217  Q
    ||||||||||||||   |||||||||||  | ||| || ||||||||||||| || |||||||||||||| |  ||| ||||||||||| ||||||||    
T  10197859 actcactcttttattatgtgaaatcaatacaagtctcatcactttatgtgggatctatttctaaagtgtaagatctatattgatttcacccaataaaa 10197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 11310515 - 11310410
Alignment:
Q  112 tctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactca 211  Q
    |||||| || ||||||| |||| | ||||||||||||||||||||||||  |||||||  || |||||  |||||||||| || || ||||||| | |||    
T  11310515 tctctaagattcactctcttattgagtgaaatcaatgtatgtcccaccatattatgtgaatttcattttcaaagtgtatgacccacgttgatttaattca 11310416  T
Q  212 ataaaa 217  Q
    ||||||    
T  11310415 ataaaa 11310410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 7599533 - 7599605
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  ||||||||||||  |||| ||||| |||| |||||| |||||||||||| ||||||||    
T  7599533 tacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgttgctaacattcctc 7599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 1205880 - 1205833
Alignment:
Q  211 aataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  1205880 aataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgcta 1205833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 31301154 - 31301213
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||||||||||| || |||||||||||||||| |||||||||| |||| |||| ||||    
T  31301154 actcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattt 31301213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 5979922 - 5979987
Alignment:
Q  123 cactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgt 188  Q
    ||||||| ||| || ||| ||||||||||||||||||||||| ||||||||| ||||  |||||||    
T  5979922 cactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgt 5979987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 189
Target Start/End: Original strand, 8903852 - 8903960
Alignment:
Q  83 gaatgttagcaacactctcttttga--gctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttc 180  Q
    |||||||||||||||||  |||| |   |||||||||  |||||||  |||||  | ||||||||||||||||||||||||||| ||| ||||| ||||     
T  8903852 gaatgttagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaatttt 8903951  T
Q  181 taaagtgta 189  Q
     ||||||||    
T  8903952 caaagtgta 8903960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 9192044 - 9192109
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| ||||| | |||||||||||| |||||||||||| ||||||||| |||| |||| ||||    
T  9192044 actctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgta 9192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 35151866 - 35151801
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||| || ||||||||||||||||||||||| ||| || || ||| |||| |||||||||    
T  35151866 actcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgta 35151801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 45246473 - 45246542
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    ||||||| |||||| || | ||||||||||||||| |||||||||||| | |||| ||||| ||||||||    
T  45246473 actcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgta 45246542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 902482 - 902410
Alignment:
Q  152 gtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaagagtgag 224  Q
    ||||||||||||||||||||  ||||||| |||| ||| |  | ||||||||||||| |||||||| ||||||    
T  902482 gtcccaccactttatgtgggacccatttccaaagcgtaggatccacattgatttcacccaataaaaaagtgag 902410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 9952909 - 9952829
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  ||||| | |||||| || ||||||||||| ||||||||||||||| |||| |||| ||||  ||||||||    
T  9952909 ctctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgta 9952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 35797436 - 35797503
Alignment:
Q  122 tcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||||| || | |||||||||||||| |||||||||| || | |||| |||| |||||||||    
T  35797436 tcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgta 35797503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 28414009 - 28413951
Alignment:
Q  121 ctcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 179  Q
    |||||| ||||||  | ||||||||||||||||||||||||||| |||| |||| ||||    
T  28414009 ctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattt 28413951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 45218698 - 45218608
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    |||||||| |||  ||||||||||||   | |||||||  |||| ||||||||| || |||||||||||  ||||||||||||||| ||||    
T  45218698 gaggaatgctagggacactctcttttatacactctctaacactcgctcttttattggatgaaatcaatgcgtgtcccaccactttaagtgg 45218608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 8914825 - 8914768
Alignment:
Q  210 caataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| ||||||||||||  ||||| || ||||||||| ||||||||||| ||||||||    
T  8914825 caatgaaagagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctc 8914768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 23142812 - 23142849
Alignment:
Q  80 gaggaatgttagcaacactctcttttgagctctctcta 117  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  23142812 gaggaatgctagcaacactctcttttgagcactctcta 23142849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 23142937 - 23143002
Alignment:
Q  198 attgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    ||||||||||| |||||||| ||| |||||  |||| ||||||||||| |||||||| ||| ||||    
T  23142937 attgatttcacccaataaaaaagtaagtgcttgagagagtgctcaaaaaagagtgttcctaacatt 23143002  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 44709342 - 44709309
Alignment:
Q  193 cctacattgatttcactcaataaaagagtgagtg 226  Q
    |||||||||||||||| |||||||||||||||||    
T  44709342 cctacattgatttcacacaataaaagagtgagtg 44709309  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 1977284 - 1977356
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  ||| | |||||||||||| ||||| |||| | ||||| |||| |||||| ||||||||    
T  1977284 tacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctc 1977356  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 11310477 - 11310537
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttg 255  Q
    ||||||||||||||||||||| ||||||| |   ||||||| ||  |||||||||||||||    
T  11310477 tacattgatttcactcaataagagagtgaatcttagagaaattgtacaaaagagagtgttg 11310537  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 17499385 - 17499305
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  ||||  |||||||| || |||||||||| |||||||||||| ||| ||| ||||| ||||  ||||||||    
T  17499385 ctctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgta 17499305  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 31301184 - 31301112
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||||||||||||  ||||||||||||||||||  || | |||| ||||||| |||||||  || ||||||||    
T  31301184 tacattgatttcatccaataaaagagtgagtgccggaaatagtgttcaaaagtgagtgttattagcattcctc 31301112  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 32072166 - 32072098
Alignment:
Q  195 tacattgatttcactcaataaaagagtgagtgcaagagaaagtgctcaaaagagagtgttgctaccatt 263  Q
    |||||| ||||||  |||||||||||||||||| ||||| |||| | ||||| || |||||||| ||||    
T  32072166 tacattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 44709299 - 44709347
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtccca 157  Q
    |||||||||  |||||||||||||| | |||||||||||||| ||||||    
T  44709299 ctctctctaacactcactcttttattgtgtgaaatcaatgtaggtccca 44709347  T

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Target: scaffold0099 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 27358 - 27467
Alignment:
Q  126 tcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtg-tatgtcctacattgatttcactcaa-taaaagagtga 223  Q
    |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||| ||| |||||||||||    
T  27358 tcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgttatgtcctacattgatttcacccaattaaaagagtga 27457  T
Q  224 gtgcaagaga 233  Q
    |||| |||||    
T  27458 gtgctagaga 27467  T

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Target: scaffold0054 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 120 - 267
Target Start/End: Complemental strand, 31054 - 30907
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| ||||||  |||||||| || |||||||  |||||||||| |||||||| |||  |||||||| || |||||||||| |||| |||||||| |    
T  31054 actcacttttttattaggtgaaattaacgtatgtcataccactttatatgggttccgttttcaaagtgtaggttctacattgatgtcacccaataaaaaa 30955  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgctaccattcctc 267  Q
    |||| ||| ||| | ||| |||||||||||||||||||| | ||||||    
T  30954 gtgaatgctagaaagagtactcaaaagagagtgttgctagccttcctc 30907  T

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Target: scaffold0018 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 27851 - 27988
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    |||||| ||||||| || || |||||||||||||||||||||||| ||||||||| ||||| |||||||| | || ||| |||||| |  |||||| |||    
T  27851 actcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgta-gacccacaatgatttaaaccaataagaga 27949  T
Q  220 gtgagtgcaagagaaagtgctcaaaagagagtgttgcta 258  Q
    ||||||   | ||| |||| ||||||||| |||||||||    
T  27950 gtgagtattaaagagagtgttcaaaagagggtgttgcta 27988  T

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Target: scaffold0543 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 9692 - 9772
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  ||||||| |||||| || |||||||||||||| |||||||| ||| ||||||||| ||||  ||||||||    
T  9692 ctctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgta 9772  T

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Target: scaffold0492 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 11238 - 11318
Alignment:
Q  109 ctctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgta 189  Q
    |||||||||  ||||||| |||||| || |||||||||||||| |||||||| ||| ||||||||| ||||  ||||||||    
T  11238 ctctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgta 11318  T

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Target: scaffold0155 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 35633 - 35691
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 178  Q
    ||||||||| ||||  | |||||||||||||||||||| || |||||||||||||||||    
T  35633 actcactctcttatttgatgaaatcaatgtatgtcccatcattttatgtgggttccatt 35691  T

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Target: scaffold0147 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 28335 - 28437
Alignment:
Q  120 actcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtatgtcctacattgatttcactcaataaaaga 219  Q
    ||||||| | |||| || ||||||||||||  |||||| || ||||||||||  ||||||  |||||||  | || ||||||||||||| |||||| |||    
T  28335 actcactttcttattggatgaaatcaatgtgggtcccatcaatttatgtgggacccattttcaaagtgtgggacccacattgatttcacccaataagaga 28434  T
Q  220 gtg 222  Q
    |||    
T  28435 gtg 28437  T

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Target: scaffold0838 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 2251 - 2311
Alignment:
Q  110 tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    ||||||||  ||||||||||||||  | ||||||||||||||||| ||| ||||| |||||    
T  2251 tctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 2282 - 2342
Alignment:
Q  110 tctctctatgactcactcttttatcgggtgaaatcaatgtatgtcccaccactttatgtgg 170  Q
    ||||||||  ||||||||||||||  | ||||||||||||||||| ||| ||||| |||||    
T  2282 tctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgtgg 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 8552 - 8508
Alignment:
Q  124 actcttttatcgggtgaaatcaatgtatgtcccaccactttatgt 168  Q
    |||||||||| || |||||||||| |||||| |||||||||||||    
T  8552 actcttttatgggatgaaatcaatatatgtctcaccactttatgt 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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