View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11767_low_18 (Length: 283)
Name: NF11767_low_18
Description: NF11767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11767_low_18 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 6014989 - 6014722
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||| |
|
|
| T |
6014989 |
aggaattagaagggctatcggggtgccagagcttgattcttactttgaaatggaaatgaaaaaaggtgtagatgatgctgaaaaggaaaagatactgaag |
6014890 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6014889 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaacacttgaagatccaaaatatggctaataagcttggatcgatgattaaca |
6014790 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaag-ggggaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6014789 |
aaattaattctacaaaagtctttgaggccattctaaggggggaagactatcaacatctgtatcaagag |
6014722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 6005093 - 6004826
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
6005093 |
aggaattagaagggctatcggggtgccagagcttgattcttactttgaaatggaaatgaaaaaaggtgtagatgatgctgaaaaggaaaagatactaaag |
6004994 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
6004993 |
gaagcgattagaaga-ccaaacaaaacaccttcatattggctgaaaaccaacactcgaagatccaaaatatggctaataagcttggatcgatgattaaaa |
6004895 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaag--ggggaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
6004894 |
aaattaattctacagaagtctttgaggccattctaagggggggaagactatcaacatctgtatcaagag |
6004826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 6021323 - 6021057
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
6021323 |
aggaattagaagggctattggggttccagagcttgattcttactttgaaatagaaatgaaaaaaggtatagatgatgctgaaaaggaaaagatactaaag |
6021224 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||| | |
|
|
| T |
6021223 |
gaagcgattagaaaaacgaaacaaaacaccttcaaattggctgaaaatcaacactcgaagatccaaaatatggccgataagcttggatcgatgattaaaa |
6021124 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaag-ggggaagactatcaacatctgtatcaaga |
266 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
6021123 |
aaattaattctacagaagtctttgaggtcattctaaggggggaagactatcaacatttgtatcaaga |
6021057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 5703424 - 5703691
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
||||||||||||||| || ||||| | ||||| |||||||| ||||||||||||||| ||||||| |||||||||||| |||||||| ||||| || | |
|
|
| T |
5703424 |
aggaattagaagggcaattggggttcctgagctcgattcttattttgaaatggaaatgaaaaaaggtgtagatgatgctcaaaaggaaaagatattacaa |
5703523 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||| |||| |||||||| |||| |
|
|
| T |
5703524 |
gaatcgattagaaaaaccaaacaaaacaccttcatattggctgaaaatcaattgtcaaagatccaaaatatggctgctaagtttggatcgatgataaaca |
5703623 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
||||| |||||||| |||||||||| || ||| ||||||| ||||| ||||||||| || |||||||| |
|
|
| T |
5703624 |
aaattgattctacagaagtctttgaagctattttaaggggtgaagattatcaacatttgcatcaagag |
5703691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 5749573 - 5749812
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||||||||||||||| ||||| || || ||||||||||| |||||||| |||||| ||||||| ||||||||||| | |||||| ||||||||||| |
|
|
| T |
5749573 |
aggaattagaagggctattggggtttctgaacttgattcttattttgaaatagaaatgaaaaaaggtatagatgatgctcagaaggaaaagatactaaag |
5749672 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| ||| || || |||||||||||| | |||||||||| |||||| | || | |
|
|
| T |
5749673 |
gaagcaattagaaaaaccaaacaaaacaccttcatattggctgaaaatcaattgtcaaaaatccaaaatatgtcggataagcttggatcgatggtaaaga |
5749772 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaagggg |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
5749773 |
aaattaattctacaaaagtctttgaagccattttaagggg |
5749812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 5786532 - 5786771
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||||||||||||||| ||||| || || ||||||||||| |||||||| |||||| ||||||| ||||||||||| | |||||| ||||||||||| |
|
|
| T |
5786532 |
aggaattagaagggctattggggtttctgaacttgattcttattttgaaatagaaatgaaaaaaggtatagatgatgctcagaaggaaaagatactaaag |
5786631 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| ||| || || |||||||||||| | |||||||||| |||||| | || | |
|
|
| T |
5786632 |
gaagcaattagaaaaaccaaacaaaacaccttcatattggctgaaaatcaattgtcaaaaatccaaaatatgtcggataagcttggatcgatggtaaaga |
5786731 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaagggg |
240 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
5786732 |
aaattaattctacaaaagtctttgaagccattttaagggg |
5786771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 5643028 - 5643280
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||| |||||||| || ||||| | ||||| || ||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
5643028 |
aggaataagaagggcaattggggttcctgagctcgactcttattttgaaatggaaatgaaaaaaggtatagatgatgctgaaaaggaaaagatattaaag |
5643127 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| |||||||| | || |
|
|
| T |
5643128 |
gaatcgattagaaaaaccaaacaaaacaccttcatattggctgaaaatcaattgtcgaagatccaaaatatggctgatacccttggatcgatgataatca |
5643227 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaa |
252 |
Q |
| |
|
||||| |||||||| |||||||| | |||||| ||||||| ||||| |||||| |
|
|
| T |
5643228 |
aaattgattctacagaagtctttaaagccattttaaggggtgaagattatcaa |
5643280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 5673392 - 5673628
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||| |||||||| || ||||| | ||||| || ||||| ||||||||||||||| ||||||| ||||||||| |||||||||| ||||| ||||| |
|
|
| T |
5673392 |
aggaataagaagggcaattggggttcctgagctcgactcttattttgaaatggaaatgaaaaaaggtatagatgatgttgaaaaggaaaagatattaaag |
5673491 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||| | |||||| |||| |
|
|
| T |
5673492 |
gaatcgattagaaaaacaaaacaaaacaccttcatattggctgaaaatcaagtgtcgaagatccaaaatatggctgatacgcttggattgatgataaaca |
5673591 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaag |
237 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||| |
|
|
| T |
5673592 |
aaattaattctacagaagtctttgaagccattttaag |
5673628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 5682893 - 5683129
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||| |||||||| || ||||| | ||||| || ||||| ||||||||||||||| ||||||| ||||||||| |||||||||| ||||| ||||| |
|
|
| T |
5682893 |
aggaataagaagggcaattggggttcctgagctcgactcttattttgaaatggaaatgaaaaaaggtatagatgatgttgaaaaggaaaagatattaaag |
5682992 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||| | |||||| |||| |
|
|
| T |
5682993 |
gaatcgattagaaaaacaaaacaaaacaccttcatattggctgaaaatcaagtgtcgaagatccaaaatatggctgatacgcttggattgatgataaaca |
5683092 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaag |
237 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||| |
|
|
| T |
5683093 |
aaattaattctacagaagtctttgaagccattttaag |
5683129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 2901814 - 2902081
Alignment:
| Q |
1 |
aggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaag |
100 |
Q |
| |
|
|||||||||||||||||| ||||| | |||||| ||||||| ||||| || |||| | || || | | ||||||||| |||| ||| ||||||||||| |
|
|
| T |
2901814 |
aggaattagaagggctattggggttcctgagcttcattcttattttgagatagaaaagaaagaatgtattgatgatgctcaaaaagaaaagatactaaag |
2901913 |
T |
|
| Q |
101 |
gaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaaca |
200 |
Q |
| |
|
||||| |||| ||||||||||||||| || ||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| |||| |
|
|
| T |
2901914 |
gaagctattacaaaaaccaaacaaaatactttcatattggctgaaaatcaactctcgaagatccgaaatatggctgataagcttggatcaatgataaaca |
2902013 |
T |
|
| Q |
201 |
aaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
| || ||||||||| ||||||||||||||||||||||||| ||||| ||||| ||| || |||||||| |
|
|
| T |
2902014 |
atataaattctacagaagtctttgaggccattctaaggggagaagattatcatcatttgcatcaagag |
2902081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 71 - 255
Target Start/End: Original strand, 2893578 - 2893763
Alignment:
| Q |
71 |
gatgatgctgaaaaggaagagatactaaaggaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaata |
170 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||| |
|
|
| T |
2893578 |
gatgatgctcaaaaggaagagatactaaatgaagctattacaaaaaccaaacaaaacactttcatattggctgaaaatcaactctcgaagatccgaaata |
2893677 |
T |
|
| Q |
171 |
tggctaataagcttggctcgatgattaacaaaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacat |
255 |
Q |
| |
|
||||| ||||| |||| || || || ||||| |||||||||||| |||||||||||| ||| |||||||| ||||| ||||||||| |
|
|
| T |
2893678 |
tggctgataagattggatcaataataaacaatattaattctacagaagtctttgaggtcatgctaaggggagaagattatcaacat |
2893763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 72 - 267
Target Start/End: Original strand, 2894527 - 2894723
Alignment:
| Q |
72 |
atgatgctgaaaaggaagagatactaaaggaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatat |
171 |
Q |
| |
|
|||||||| |||| ||| |||||| ||||||||| |||| ||||||| |||||||| ||||| ||||||||||| || ||||||||||| |||||| |
|
|
| T |
2894527 |
atgatgctcaaaaagaaaagatacaaaaggaagctattacaaaaaccgtacaaaacattttcatcttggctgaaaatcagctctcgaagatccgaaatat |
2894626 |
T |
|
| Q |
172 |
ggctaataagcttggctcgatgattaacaaaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
|||| |||||||||| || ||||| ||||| |||||||||||| ||||||||||| ||||||||||||| ||||| ||||| ||| || |||||||| |
|
|
| T |
2894627 |
ggctgataagcttggatcaatgataaacaatattaattctacagaagtctttgagaccattctaaggggagaagattatcagcatttgcatcaagag |
2894723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 5698001 - 5698030
Alignment:
| Q |
109 |
tagaaaaaccaaacaaaacaccttcatatt |
138 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
5698001 |
tagaaaaaccaaacaaaacaccttcatatt |
5698030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 1121779 - 1121541
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||||||||| |||| || |||| | ||| ||| | ||||||||| ||||||| | ||||| |||| |
|
|
| T |
1121779 |
ggaattagaagggctattggggttcctgagcttgattctttttttgcgattgaaaagaaaagtggcattgatgatgctataaaggaaaatatactgaagg |
1121680 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| ||| |||||||||||| ||||| | |||| | ||| |||| ||| |||||||||||| || |||||| ||| |||||| |||||| | |||| |
|
|
| T |
1121679 |
aagctattgaaaaaaccaaacagaacacttgcatactagctaaaaatcaactctcgaagatccagaacatggctcatatgcttggatcgatggtgtacaa |
1121580 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattctaagggg |
240 |
Q |
| |
|
|||| ||||||| ||||||||||| || || ||||||| |
|
|
| T |
1121579 |
aattgattctacggaagtctttgagacccttttaagggg |
1121541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 7959884 - 7959618
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| ||||| | |||||| |||||| ||||| || |||| | |||| ||| | || |||||| ||||||| |||| || |||| |
|
|
| T |
7959884 |
ggaattagaagggctattggggttcctgagcttaattctttttttgagatagaaaagaaaaatggcattgacgatgctcaaaaggagaagattctgaagg |
7959785 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| ||| ||||||| ||||| ||||| | |||||||| |||||| ||| || ||||||||| || |||||| ||| | |||| || ||| | | | |
|
|
| T |
7959784 |
aagctattggaaaaacgaaacataacacttgcatattggttgaaaatcaactcttgaagatccataacatggctgatatgtttggatcaatggtgtatag |
7959685 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
|||| ||||||| ||||||||||||||| || ||||||| ||||| ||| ||||| || |||||||| |
|
|
| T |
7959684 |
aattgattctacgaaagtctttgaggcccttttaaggggagaagattataaacatttgcatcaagag |
7959618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 267
Target Start/End: Original strand, 9984372 - 9984567
Alignment:
| Q |
73 |
tgatgctgaaaaggaagagatactaaaggaagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatg |
172 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||| ||| ||| |||||||| ||||| | |||| ||||| |||| ||| |||||||||||| || ||| |
|
|
| T |
9984372 |
tgatgctataaaggaaaagatactgaaggaagctattgaaaacaccaaacagaacacttgcatactggctaaaaatcaactctcgaagatccagaacatg |
9984471 |
T |
|
| Q |
173 |
gctaataagcttggctcgatgattaacaaaattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
||| || ||| || |||||| | |||||||| |||| || |||||||||||||| || ||||||| ||||| ||| ||||| || |||||||| |
|
|
| T |
9984472 |
gctcgtatgctcggatcgatggtgtacaaaattgattcaactgaagtctttgaggcccttttaaggggagaagattataaacatgtgcatcaagag |
9984567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 16213969 - 16213703
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| | |||| | | | ||||||||| |||||||| ||||| | | |
|
|
| T |
16213969 |
ggaattagaagggctattggggttcctgagcttgattctttttttcaaatagaaaagaaaaatgacattgatgatgctcaaaaggaaaagatattggccg |
16213870 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| || |||||||||||||| ||||| | |||||||| | |||| ||| || ||||||| | ||||||||| | | ||||| |||||| | |||| |
|
|
| T |
16213869 |
aagctatcagaaaaaccaaacagaacacttgcatattggttcaaaatcaactcttgaagatcaagaatatggctcaaatccttgggtcgatggtatacaa |
16213770 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattct-aagggggaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
||| ||||||| |||||||||||||| |||| ||||| ||||| ||| ||||| || |||||||| |
|
|
| T |
16213769 |
gattgattctacggaagtctttgaggcccttctgaagggagaagattataaacatttgcatcaagag |
16213703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 16216622 - 16216356
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| | |||| | | | ||||||||| |||||||| ||||| | | |
|
|
| T |
16216622 |
ggaattagaagggctattggggttcctgagcttgattctttttttcaaatagaaaagaaaaatgacattgatgatgctcaaaaggaaaagatattggccg |
16216523 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| || |||||||||||||| ||||| | |||||||| | |||| ||| || ||||||| | ||||||||| | | ||||| |||||| | |||| |
|
|
| T |
16216522 |
aagctatcagaaaaaccaaacagaacacttgcatattggttcaaaatcaactcttgaagatcaagaatatggctcaaatccttgggtcgatggtatacaa |
16216423 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattct-aagggggaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
||| ||||||| |||||||||||||| |||| ||||| ||||| ||| ||||| || |||||||| |
|
|
| T |
16216422 |
gattgattctacggaagtctttgaggcccttctgaagggagaagattataaacatttgcatcaagag |
16216356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 266
Target Start/End: Complemental strand, 16228567 - 16228302
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| | ||| | ||||||||||||| ||| | || |||| | |||| | | | ||||||||| ||| |||| ||||| | | |
|
|
| T |
16228567 |
ggaattagaagggctattgcggttcctgagcttgattctttttttcagatagaaaagaaaaatgacattgatgatgctcaaatggaaaagatattggccg |
16228468 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| || |||||||||||||| ||||| | |||||||| | |||| ||| || || |||| | ||||||||| | | |||||| |||||| | |||| |
|
|
| T |
16228467 |
aagctatcagaaaaaccaaacagaacacttccatattggttcaaaatcaactcttgaggatcgagaatatggctcaaatgcttgggtcgatggtgtacaa |
16228368 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattct-aagggggaagactatcaacatctgtatcaaga |
266 |
Q |
| |
|
|||| ||||||| |||||||||||||| |||| ||||| ||||| ||| ||||| || ||||||| |
|
|
| T |
16228367 |
aattgattctacggaagtctttgaggcccttctgaagggagaagattataaacatttgcatcaaga |
16228302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 267
Target Start/End: Complemental strand, 31400946 - 31400680
Alignment:
| Q |
2 |
ggaattagaagggctatcggggtgtcagagcttgattcttactttgaaatggaaatggaaaaaggcgtagatgatgctgaaaaggaagagatactaaagg |
101 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||||||||| || | || |||| | ||| ||| | ||||||||| ||||||| |||||| ||| |
|
|
| T |
31400946 |
ggaattagaagggctattggggttcctgagcttgattcttttttcgcgatagaaaagaaaagtggcattgatgatgctataaaggaaatgatacttaaga |
31400847 |
T |
|
| Q |
102 |
aagcgattagaaaaaccaaacaaaacaccttcatattggctgaaaaccaaaactcgaagatccaaaatatggctaataagcttggctcgatgattaacaa |
201 |
Q |
| |
|
|||| ||| | |||||||||||||||| | |||| ||||| |||| ||| |||||||||||| || ||| || ||| ||||| |||||| | | || |
|
|
| T |
31400846 |
aagctattgaagaaaccaaacaaaacacttgcatactggctaaaaatcaactctcgaagatccagaacatgactcatatgcttgaatcgatggtgtataa |
31400747 |
T |
|
| Q |
202 |
aattaattctacaaaagtctttgaggccattctaagggg-gaagactatcaacatctgtatcaagag |
267 |
Q |
| |
|
|||| ||||||| |||||||||||||| || ||||||| ||||| ||| ||||| || |||||||| |
|
|
| T |
31400746 |
aattgattctacggaagtctttgaggcccttttaaggggagaagattataaacatttgcatcaagag |
31400680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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