View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11767_low_21 (Length: 250)

Name: NF11767_low_21
Description: NF11767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11767_low_21
NF11767_low_21
[»] chr1 (25 HSPs)
chr1 (1-237)||(42055737-42055973)
chr1 (69-237)||(31387427-31387595)
chr1 (69-236)||(42463678-42463845)
chr1 (69-237)||(4911991-4912159)
chr1 (69-237)||(27106081-27106249)
chr1 (69-237)||(15291644-15291812)
chr1 (69-237)||(46192348-46192516)
chr1 (69-237)||(18242852-18243020)
chr1 (73-237)||(50914777-50914941)
chr1 (1-67)||(44310764-44310830)
chr1 (5-70)||(22070616-22070682)
chr1 (5-70)||(9023537-9023602)
chr1 (13-66)||(21906496-21906550)
chr1 (13-66)||(48596285-48596339)
chr1 (13-66)||(5049572-5049626)
chr1 (1-67)||(5208365-5208431)
chr1 (13-66)||(17967257-17967311)
chr1 (5-70)||(23664033-23664099)
chr1 (13-66)||(26465194-26465248)
chr1 (13-66)||(34307379-34307433)
chr1 (1-59)||(47559256-47559314)
chr1 (1-59)||(48646424-48646482)
chr1 (1-66)||(12028247-12028312)
chr1 (1-51)||(12783478-12783528)
chr1 (1-61)||(28945408-28945468)
[»] chr5 (27 HSPs)
chr5 (69-236)||(19876480-19876647)
chr5 (69-235)||(10825770-10825936)
chr5 (69-237)||(7262834-7263002)
chr5 (69-237)||(24169443-24169611)
chr5 (69-237)||(37980317-37980484)
chr5 (69-146)||(23067167-23067244)
chr5 (1-66)||(13820533-13820598)
chr5 (1-66)||(16686658-16686723)
chr5 (1-70)||(29150710-29150779)
chr5 (1-70)||(43170943-43171012)
chr5 (5-67)||(42879711-42879773)
chr5 (1-62)||(5120422-5120483)
chr5 (5-70)||(13490503-13490568)
chr5 (1-62)||(37135206-37135267)
chr5 (13-70)||(39537333-39537390)
chr5 (1-57)||(16039928-16039983)
chr5 (1-61)||(29789919-29789979)
chr5 (20-63)||(8805959-8806002)
chr5 (5-66)||(2677081-2677143)
chr5 (13-66)||(13382533-13382587)
chr5 (5-70)||(18889181-18889247)
chr5 (13-66)||(23962967-23963021)
chr5 (18-59)||(26402398-26402439)
chr5 (16-67)||(13825893-13825944)
chr5 (5-67)||(5578534-5578596)
chr5 (1-70)||(20891049-20891118)
chr5 (1-61)||(38491484-38491544)
[»] chr8 (21 HSPs)
chr8 (69-237)||(41269758-41269926)
chr8 (69-237)||(44115975-44116143)
chr8 (69-237)||(42095822-42095990)
chr8 (73-235)||(20477678-20477840)
chr8 (69-237)||(8317097-8317265)
chr8 (69-237)||(18701226-18701394)
chr8 (1-70)||(9381762-9381831)
chr8 (5-70)||(16729843-16729908)
chr8 (1-59)||(23231918-23231976)
chr8 (1-62)||(602052-602113)
chr8 (1-70)||(11648034-11648103)
chr8 (13-66)||(31597639-31597693)
chr8 (5-70)||(7263558-7263623)
chr8 (5-66)||(9137809-9137867)
chr8 (5-67)||(7972907-7972969)
chr8 (13-70)||(45117579-45117637)
chr8 (1-46)||(24190111-24190156)
chr8 (1-37)||(28374296-28374332)
chr8 (13-62)||(1981717-1981767)
chr8 (1-61)||(6927154-6927214)
chr8 (1-61)||(28516905-28516965)
[»] chr3 (25 HSPs)
chr3 (69-237)||(52560987-52561155)
chr3 (69-235)||(177878-178044)
chr3 (69-237)||(48164704-48164872)
chr3 (73-237)||(18943059-18943223)
chr3 (73-237)||(45034571-45034735)
chr3 (103-235)||(9088-9220)
chr3 (69-237)||(55150735-55150902)
chr3 (93-229)||(18908106-18908242)
chr3 (1-70)||(33100352-33100421)
chr3 (1-70)||(44879932-44880001)
chr3 (1-63)||(3917625-3917687)
chr3 (5-66)||(19157210-19157272)
chr3 (5-66)||(25071760-25071822)
chr3 (1-47)||(29714097-29714143)
chr3 (5-70)||(52448256-52448321)
chr3 (152-237)||(54315422-54315507)
chr3 (13-66)||(27941449-27941503)
chr3 (1-67)||(44663097-44663165)
chr3 (1-62)||(47185471-47185532)
chr3 (1-63)||(10992847-10992906)
chr3 (1-56)||(12893428-12893483)
chr3 (13-70)||(10994082-10994140)
chr3 (13-66)||(15760976-15761030)
chr3 (13-66)||(53076901-53076955)
chr3 (1-61)||(31884553-31884613)
[»] chr7 (25 HSPs)
chr7 (69-237)||(42014034-42014202)
chr7 (69-237)||(46526472-46526640)
chr7 (69-237)||(41964229-41964397)
chr7 (69-237)||(6272910-6273078)
chr7 (73-237)||(10554507-10554671)
chr7 (69-233)||(31593722-31593886)
chr7 (3-67)||(3123690-3123754)
chr7 (5-70)||(20394711-20394776)
chr7 (5-70)||(4539974-4540040)
chr7 (5-70)||(21863972-21864037)
chr7 (6-70)||(8113431-8113495)
chr7 (5-70)||(13754228-13754293)
chr7 (11-66)||(1623681-1623737)
chr7 (5-66)||(8389224-8389286)
chr7 (5-70)||(18667481-18667546)
chr7 (1-66)||(24441583-24441648)
chr7 (5-70)||(35477903-35477968)
chr7 (2-63)||(39038170-39038228)
chr7 (69-167)||(45075629-45075725)
chr7 (17-63)||(9420799-9420845)
chr7 (13-66)||(31072457-31072511)
chr7 (192-237)||(28507579-28507624)
chr7 (1-61)||(8070020-8070080)
chr7 (1-57)||(6189000-6189056)
chr7 (1-57)||(6195516-6195572)
[»] chr4 (24 HSPs)
chr4 (69-237)||(12024940-12025108)
chr4 (69-237)||(54602605-54602773)
chr4 (69-237)||(39388867-39389035)
chr4 (112-237)||(16347173-16347298)
chr4 (1-66)||(3665070-3665135)
chr4 (1-70)||(52460654-52460723)
chr4 (1-66)||(10142634-10142699)
chr4 (1-66)||(31915585-31915650)
chr4 (20-70)||(24611029-24611078)
chr4 (1-59)||(25201790-25201848)
chr4 (5-67)||(36213848-36213910)
chr4 (1-40)||(1842924-1842963)
chr4 (13-66)||(10094955-10095009)
chr4 (5-67)||(39480177-39480239)
chr4 (1-70)||(9921618-9921684)
chr4 (20-63)||(13957742-13957785)
chr4 (13-66)||(7413677-7413731)
chr4 (13-66)||(7459758-7459812)
chr4 (13-70)||(28803827-28803885)
chr4 (1-70)||(9896309-9896373)
chr4 (22-64)||(42511284-42511326)
chr4 (5-70)||(20151832-20151897)
chr4 (25-70)||(51758964-51759009)
chr4 (1-57)||(21320327-21320382)
[»] chr2 (34 HSPs)
chr2 (69-237)||(34458413-34458581)
chr2 (69-237)||(40612907-40613075)
chr2 (69-236)||(31501192-31501359)
chr2 (69-215)||(4174696-4174842)
chr2 (69-233)||(2119908-2120072)
chr2 (69-237)||(2777045-2777213)
chr2 (69-182)||(26393704-26393817)
chr2 (134-237)||(694860-694963)
chr2 (69-237)||(15738271-15738439)
chr2 (1-70)||(31548784-31548853)
chr2 (1-70)||(24484749-24484815)
chr2 (1-70)||(38565989-38566055)
chr2 (5-67)||(7444038-7444100)
chr2 (79-237)||(29902148-29902306)
chr2 (1-60)||(6883758-6883817)
chr2 (69-144)||(19508503-19508577)
chr2 (1-70)||(41302211-41302277)
chr2 (5-66)||(6221503-6221565)
chr2 (1-51)||(19090894-19090944)
chr2 (5-66)||(33015118-33015180)
chr2 (1-70)||(11198919-11198988)
chr2 (184-237)||(26391541-26391594)
chr2 (5-65)||(22575910-22575970)
chr2 (192-237)||(26172627-26172672)
chr2 (1-59)||(25621946-25622004)
chr2 (13-62)||(44313976-44314026)
chr2 (13-62)||(44322155-44322205)
chr2 (14-65)||(14904527-14904578)
chr2 (1-62)||(25415333-25415391)
chr2 (13-66)||(2554173-2554226)
chr2 (13-66)||(41825898-41825951)
chr2 (1-61)||(7879956-7880016)
chr2 (1-61)||(19678474-19678534)
chr2 (1-61)||(45277099-45277159)
[»] scaffold1043 (1 HSPs)
scaffold1043 (69-237)||(3022-3190)
[»] chr6 (25 HSPs)
chr6 (69-237)||(19268810-19268978)
chr6 (69-237)||(5620217-5620385)
chr6 (69-235)||(33523337-33523502)
chr6 (130-237)||(2946134-2946241)
chr6 (1-67)||(15060259-15060325)
chr6 (1-66)||(13758507-13758572)
chr6 (1-70)||(26817732-26817801)
chr6 (8-70)||(11680402-11680463)
chr6 (79-237)||(33522380-33522538)
chr6 (5-66)||(34043661-34043723)
chr6 (5-70)||(20990552-20990617)
chr6 (1-62)||(22524995-22525053)
chr6 (5-66)||(1603486-1603548)
chr6 (1-63)||(15603699-15603761)
chr6 (5-66)||(21442754-21442816)
chr6 (124-210)||(23058627-23058713)
chr6 (5-66)||(1423072-1423133)
chr6 (18-59)||(1831263-1831304)
chr6 (5-70)||(18675466-18675531)
chr6 (18-66)||(1131891-1131939)
chr6 (1-70)||(19108208-19108274)
chr6 (1-70)||(31130049-31130115)
chr6 (1-47)||(3228984-3229030)
chr6 (13-62)||(22012049-22012099)
chr6 (1-61)||(33516223-33516283)
[»] scaffold0079 (1 HSPs)
scaffold0079 (112-237)||(45563-45688)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-70)||(41088-41154)
[»] scaffold1266 (1 HSPs)
scaffold1266 (1-59)||(1697-1755)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-67)||(1084-1150)
[»] scaffold1364 (1 HSPs)
scaffold1364 (1-70)||(1220-1289)
[»] scaffold0013 (1 HSPs)
scaffold0013 (178-233)||(62909-62964)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-59)||(18263-18321)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-63)||(21101-21162)


Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 42055737 - 42055973
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaatctgatacgtaagggaagggcgaccagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  42055737 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaataacacatgcgaatctgatacgtaagggcagggcgaccagtac 42055836  T
Q  101 cggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgt 200  Q
    |||||||| |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||||    
T  42055837 cggctatccgcatcacctcctggacaatctcctctttagtcatctcagctttcttggccacaatatcaccaactatatgcacaacatcctggatgatcgt 42055936  T
Q  201 cagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    ||||||||||||||||||| |||||||||||||||||    
T  42055937 cagtgtgtcaggcatctccttggcatgctcctcctct 42055973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 31387595 - 31387427
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||| ||||||||||| ||||||| |||| ||||||||||||||||    
T  31387595 aatctgatacgtaagggcagggcgaccagtaccggctatccacatcacctcctggacagtctcctctttagtcatctcggcttgcctggccacaatatca 31387496  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  31387495 tcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 31387427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 42463678 - 42463845
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||| ||||||| ||||||||| |||||||||||    
T  42463678 aatctaatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctcgttagtcatctcggctttcctgaccacaatatca 42463777  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctc 236  Q
     | ||||||||||| |||||  |||||||||| |||||||||| ||||||||||||||||| ||||||    
T  42463778 tcagctatatgcaccacatcccggatgatcgttagtgtgtcagacatctccctggcatgcttctcctc 42463845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 4911991 - 4912159
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||  |||||| |||||||||| ||||||||| | |||||||||||| |||||||| ||||||| ||||||| |||| ||||||||||||||||    
T  4911991 aatctgatatataagggcagggcgaccaataccggctacccgcatcacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatca 4912090  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     ||| ||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4912091 tcggttatatgcaccacatcccggatgatcgtcagtgtgtcaggcatcttcctggcatgctcctcctct 4912159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 27106081 - 27106249
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||| |||| |||| |||||||||||    
T  27106081 aatctgatacataagggcagggcgaccagtaccggctatccgcatcacctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatca 27106180  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| | |||  ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27106181 tcagctatatgcaccatatcccggatgatcgtcagtgtgtcagacatctccctgacatgctcctcctct 27106249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 15291644 - 15291812
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||| |||||| ||||||||||| | |||||||||| ||||||||||| |||| ||||||| |||| |||| |||||||||||    
T  15291644 aatctgatacgtaagggcaggacgaccaataccggctatccgtatcacctcctggacaatctcctatttagtcatctcggcttgcctgaccacaatatca 15291743  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  15291744 tcagctatatgcaccacatcccggatgatcgtcagtgtgtcagacatctccctggaatgctcctcctct 15291812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 46192348 - 46192516
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||| |||||| |||||||| |||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||| ||||||||||||||||    
T  46192348 aatctgatacataaggggagggcgactagtaccggttatccgcatcacctccaggacaatctcctctttagtcatctcggcttgcctggccacaatatca 46192447  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  |||||||||| |||||  |||||||||| |||||||||| |||||||||| ||||||| ||||||    
T  46192448 tcaactatatgcaccacatcccggatgatcgtgagtgtgtcagacatctccctgacatgctcatcctct 46192516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 18243020 - 18242852
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||||| |||||  | |||||| |||||||||||||| |||||||||||| |||| || |||| |||||||||||||||     
T  18243020 aatctgataagtaagggcagggcgactagtactagatatctgtatcacctcctagacgatctcctctttagtcatatcggcttgcctggccacaatatcg 18242921  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | || |||||||| | |||  |||||||||||||||||||||||||||||||  ||||||||||||||    
T  18242920 tcagcaatatgcaccagatccgggatgatcgtcagtgtgtcaggcatctccctaacatgctcctcctct 18242852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 50914941 - 50914777
Alignment:
Q  73 tgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccgg 172  Q
    ||||| ||||||| |||||| | |||||  |||||| |||||||||||| ||| |||||||||||| || |||| |||| |||||||||||||||  |      
T  50914941 tgataagtaagggcagggcggctagtactagctatccgcatcacctcctggacgatctcctctttagtcgtctcggcttgcctggccacaatatcgtcaa 50914842  T
Q  173 ctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    | |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  50914841 caatatgcaccacatctcggatgatcctcagtgtgtcaggcatctccctggcatgctcctcctct 50914777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44310830 - 44310764
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44310830 aatcaaatactctatacacaccaaaacaaaataaaatatcgtagaagtagagaacaatagcacatgc 44310764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 22070682 - 22070616
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22070682 aaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgcgaa 22070616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 9023602 - 9023537
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||  |||||||||    
T  9023602 aaatactctatagacaccaaaacaaaataaaatatcgtaaaagtagagaacaataatacatgcgaa 9023537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 21906550 - 21906496
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  21906550 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 21906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 48596285 - 48596339
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  48596285 tatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 48596339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 5049626 - 5049572
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  5049626 tatatacaccaaaataaaataaaaataccgtagaagtagagaaaaatagcacatg 5049572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5208365 - 5208431
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    |||||||||||  ||| ||||||||| ||||||||||| |||||||||| |||||||| | ||||||    
T  5208365 aatcaaatactccataaacaccaaaataaaataaaatatcgtagaagtatagaacaattgaacatgc 5208431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 17967257 - 17967311
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  17967257 tatatacatcaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 17967311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 23664033 - 23664099
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtag-agaacaatagcacatgcgaa 70  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||| | || |||||||||||||||    
T  23664033 aaatactctatgtacaccaaaacaaaataaaatatcgtagaagtagaaaaaaaatagcacatgcgaa 23664099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 26465248 - 26465194
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  26465248 tatatacaccaaaacaaaataaaaatactgtagaagtagagaaaaatagcacatg 26465194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 34307379 - 34307433
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  34307379 tatatacaccaaaacaaaataaaaatatcgtagaagtagagaaaaatagcacatg 34307433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47559256 - 47559314
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||||||| |||| ||||||||| ||||||||||||   |||||||||||||||||    
T  47559256 aatcaaatactctataaacaccaaaataaaataaaatacgagagaagtagagaacaata 47559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48646482 - 48646424
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||||| | |||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  48646482 aatcaaataatctatatacaccaacacaaaataaaatatcgtagaagtatagaacaata 48646424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12028312 - 12028247
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||||| || |||||||| |||||||||||||||| | |||||||| ||||||| | ||||||    
T  12028312 aatcaaatatttcatagacacaaaaacaaaataaaatatcctagaagtatagaacaacaacacatg 12028247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12783478 - 12783528
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtaga 51  Q
    |||||||||||| ||| |||||||||||| ||||||||  |||||||||||    
T  12783478 aatcaaatacttcataaacaccaaaacaatataaaatattgtagaagtaga 12783528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28945408 - 28945468
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||  ||||| |||||||| ||| |||||||| ||| | ||||||||||||||    
T  28945408 aatcaaatactccatagaaaccaaaactaaacaaaataccataggattagagaacaatagc 28945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 19876647 - 19876480
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||||||    
T  19876647 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctagacaatctcctctttagtcatctcgacttgcctggccacaatatca 19876548  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctc 236  Q
     | ||||||||||| |||||  |||||||||| |||||||||||||||||| ||||||||||||||||    
T  19876547 tcagctatatgcaccacatcccggatgatcgttagtgtgtcaggcatctccatggcatgctcctcctc 19876480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 10825770 - 10825936
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| |||| |||| |||||||||||    
T  10825770 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctgaccacaatatca 10825869  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcct 235  Q
     | ||||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  10825870 tcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctccctagcatgctcctcct 10825936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 7263002 - 7262834
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||  |||| |||| ||||||||||     
T  7263002 aatctgatacgtaagggaagggcgaccagtaccggctatccgcatcacctcctggacaatatcctctttagtcatcttggcttgcctgaccacaatatcg 7262903  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  7262902 tcagctatatgcaccacatctcggatgatcgtcggtgtgttaggcatctctctggcatgctcctcctct 7262834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 24169611 - 24169443
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||  |||||| ||  |||| |||||  |||||| |||||||||||| ||||||||||| |||| ||||||| |||| |||||||||||||||     
T  24169611 aatctgataattaagggcagtacgactagtactagctatccgcatcacctcctggacaatctcctttttagtcatctcggcttgcctggccacaatatcg 24169512  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24169511 tcagcaatatgcaccacatcttggatgatcgtcagtgtgtcaggcatctccctgacatgctcctcctct 24169443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 37980317 - 37980484
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||||| ||||| | ||||| |||||||||| | |||||||||||||||| ||||||| |||| |||||||||||||||     
T  37980317 aatctgataagtaagggcagggcgactagtactg-ctatcagcatcacctcgtggacaatctcctctttagtcatctcggcttgcctggccacaatatcg 37980415  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | || |||||||| |||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  37980416 tcagcaatatgcaccacatcccggatgatcgtcagtgtgtcagacatctccctggcatgctcctcctct 37980484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 23067244 - 23067167
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctc 146  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||||||||||| |||||||    
T  23067244 aatctgatacgtaagggcagggcgaccagtaccggctatccccatcacctcctggacaatctcctctttagtcatctc 23067167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13820533 - 13820598
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  13820533 aatcaaatacctcatagacaccaaaacaaaataaaataccgtagaagtagagaacaacaacacatg 13820598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16686658 - 16686723
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16686658 aatcagatacttcatagacaccaaaacaaaataaaataccgtataagtatagaacaatagcacatg 16686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29150779 - 29150710
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||| ||| ||||||    
T  29150779 aatcaaatacttcatagataccaaaacaaaataaaataccgtaaaagtagagagcaataacacttgcgaa 29150710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43170943 - 43171012
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||| | |||||||||||||||||||||||| |||||||| |  |||||||||||||||||||    
T  43170943 aatcaaatactctttagacaccaaaacaaaataaaatatcgtagaagcatggaacaatagcacatgcgaa 43171012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 42879773 - 42879711
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  42879773 aaatactctatatacaccaaaacaaaataaaataccatagatgtagagaaaaatagcacatgc 42879711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5120422 - 5120483
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    |||| ||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  5120422 aatccaatactccataaacaccaaaacaaaataaaataccgtagaagtatagaacaatagca 5120483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13490568 - 13490503
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||||||||  |||||||||| |||| |||||||||||||||    
T  13490568 aaatactctatatacaccaaaacaaaataaaatgtcgtagaagtatagaaaaatagcacatgcgaa 13490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37135267 - 37135206
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    |||||||||||  |||||||||||||||| |||||||| | |||||||||||||||||||||    
T  37135267 aatcaaatactccatagacaccaaaacaacataaaatatcttagaagtagagaacaatagca 37135206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 39537333 - 39537390
Alignment:
Q  13 tatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  39537333 tatatacaccaaaacaaaataaaatatcttagaagtagagaaaaatagcacatgcgaa 39537390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16039928 - 16039983
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaa 57  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  16039928 aatcaaatactctatagacaccaaaacaaaataaaa-accgtagaagcagagaacaa 16039983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29789979 - 29789919
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    ||||||||| | |||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  29789979 aatcaaatattctatagataccaaaacaaaataaaatatcgtagaagtatagaacaatagc 29789919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 8805959 - 8806002
Alignment:
Q  20 accaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8805959 accaaaacaaaataaaataccgtagaagtagataacaatagcac 8806002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 2677143 - 2677081
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  2677143 aaatattttatacacaccaaaccaaaataaaaataccgtagaagtagagaaaaatagcacatg 2677081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 13382533 - 13382587
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  13382533 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 13382587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18889247 - 18889181
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||| | ||||||||    
T  18889247 aaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaataactcatgcgaa 18889181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 23963021 - 23962967
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  23963021 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 23962967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 26402439 - 26402398
Alignment:
Q  18 acaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  26402439 acaccaaaacaaaataaaataccgtagaagtagcgaacaata 26402398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 13825893 - 13825944
Alignment:
Q  16 agacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||| |||||||    
T  13825893 agacacaaaaacaaaacaaaataccgtaaaagtagagaacaataacacatgc 13825944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 5578534 - 5578596
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||| |||  ||||||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  5578534 aaatactctatgtacaccaaaacaaaataaaatatcgtaaaagtagagaaaaatagcatatgc 5578596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20891049 - 20891118
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||| || | |||||||||||||||||||||  ||||||||| |||| | || ||||||||||    
T  20891049 aatcaaatactctacacacaccaaaacaaaataaaatattgtagaagtaaagaatattatcacatgcgaa 20891118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38491544 - 38491484
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  38491544 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 38491484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 41269926 - 41269758
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||| | || ||||||||||||||||    
T  41269926 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcttggacaatctcctctttagtcatctcggtttgcctggccacaatatca 41269827  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  41269826 tcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctctctggcatgctcctcctct 41269758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 44115975 - 44116143
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||    
T  44115975 aatctgatacgtaagggcagggcgaccggtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatca 44116074  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| ||||| | |||||||||||||||||||||| ||||| |||||||||||||||||    
T  44116075 tcagctatatgcaccacatcctagatgatcgtcagtgtgtcaggcgtctccttggcatgctcctcctct 44116143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 42095822 - 42095990
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||| ||||| ||||| |||||||||||| |||||||||||||||| ||||||| |||| ||| ||||||||||||    
T  42095822 aatctgatacgtaagggcagggcgaccaataccgactatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctagccacaatatca 42095921  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |   ||||||||| |||||| ||||||||||||| ||||||| ||| || ||||||||||||||||||    
T  42095922 tcaaatatatgcaccacatctcggatgatcgtcagcgtgtcagacatttctctggcatgctcctcctct 42095990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 235
Target Start/End: Original strand, 20477678 - 20477840
Alignment:
Q  73 tgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccgg 172  Q
    ||||| ||||||| |||||||| |||||  |||||| |||||||||||| ||| |||||||||||| ||||||| || | |||||||||||||||| | |    
T  20477678 tgataagtaagggcagggcgactagtactagctatccgcatcacctcctggacgatctcctctttagtcatctcggcatgcctggccacaatatcatcag 20477777  T
Q  173 ctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcct 235  Q
    | |||||||| |||||    |||||||||||||||||||||||||||||||||||||||||||    
T  20477778 caatatgcaccacatcccatatgatcgtcagtgtgtcaggcatctccctggcatgctcctcct 20477840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 8317097 - 8317265
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||||| ||||   |||||| |||||||||||| ||||||||||| |||| | ||||| | || | |||||||||||||     
T  8317097 aatctgataagtaagggcagggcgactagtagtagctatccgcatcacctcctggacaatctcctatttagtgatctcggtttgcttggccacaatatcg 8317196  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | || |||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  8317197 tcagcaatatgcaccacatcccggatgatcgtcagtgtgtcaagcatctccctggcatgctcctcctct 8317265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 18701226 - 18701394
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||| |||| | | ||| | ||||||||||| ||| | ||||||||| ||||||   |  |||| | |||||||| |    
T  18701226 aatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctcctaaacagtatcctctttagtcatcttgccgctcctagacacaatatta 18701325  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||| ||||| |||||    |||||||||||||||||||||||||| ||||||||||||||||||    
T  18701326 tcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctctctggcatgctcctcctct 18701394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9381762 - 9381831
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||  |||||||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  9381762 aatcaaatactccatagacaccaaaacaaaataaagtatcgtagaagtatagaacaatagcacatgcgaa 9381831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 16729908 - 16729843
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  16729908 aaatactctatgtacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcacatgcgaa 16729843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23231918 - 23231976
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||||| || || |||||||||| ||||||||||||||||||||||||||||||||    
T  23231918 aatcaaatatttcattgacaccaaaataaaataaaataccgtagaagtagagaacaata 23231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 602052 - 602113
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    |||||||||||| ||||||| |||||||||||||||||  || |||||||||||||||||||    
T  602052 aatcaaatacttcatagacaacaaaacaaaataaaatattgttgaagtagagaacaatagca 602113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11648034 - 11648103
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||| |||||||| |||||||||||||||||  || |||||| |||||||| ||||||||||    
T  11648034 aatcaaatacttcatagacacaaaaacaaaataaaatactataaaagtagtgaacaataacacatgcgaa 11648103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 31597693 - 31597639
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  31597693 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 31597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 7263558 - 7263623
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||||||| ||||    
T  7263558 aaatactatatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatccgaa 7263623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 9137867 - 9137809
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||   |||||||||||||||    
T  9137867 aaatactttatagaaaccaaaacaaactaaaataccgtaaaagt---gaacaatagcacatg 9137809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 7972907 - 7972969
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    |||||||  ||| |||| ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  7972907 aaatactcaatatacacaaaaacaaaataaaatactgtagatgtagagaaaaatagcacatgc 7972969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 45117637 - 45117579
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||| ||||||||||||||||||| ||||||||||||||| || ||||||| |||||||    
T  45117637 tatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaa 45117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24190111 - 24190156
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaa 46  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||    
T  24190111 aatcaaatactttatagacaccaaaacaaactaaattactgtagaa 24190156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28374296 - 28374332
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaat 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28374296 aatcaaatacttcatagacaccaaaacaaaataaaat 28374332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1981767 - 1981717
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagca 62  Q
    |||| ||||||||||||||||||| || ||||||||||||||| |||||||    
T  1981767 tatacacaccaaaacaaaataaaaatatcgtagaagtagagaaaaatagca 1981717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6927154 - 6927214
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  6927154 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 6927214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28516965 - 28516905
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  28516965 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 28516905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 52561155 - 52560987
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||    
T  52561155 aatctgttacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatca 52561056  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  52561055 tcagctatatgcaccacatcccggatgattgtcagtgtgtcagacatctccctggcatgctcctcctct 52560987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 177878 - 178044
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||||| |||| ||||||||||||||||    
T  177878 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatcttctctttagtcatctcggcttgcctggccacaatatca 177977  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcct 235  Q
     | ||||||||||| ||||||  |||||||||||||||||||||||||||  |||||||||||||||    
T  177978 tcagctatatgcaccacatctcagatgatcgtcagtgtgtcaggcatctctttggcatgctcctcct 178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 48164872 - 48164704
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||| |||||||||| ||||||||||    
T  48164872 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggacaatatcctctttagtcatctcggctttcctggtcacaatatca 48164773  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | | ||||||||| |||||| ||||||||||||||||||||  |||||| |||| |||||||||||||    
T  48164772 tcagttatatgcaccacatctcggatgatcgtcagtgtgtcaaacatctctctggtatgctcctcctct 48164704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 73 - 237
Target Start/End: Original strand, 18943059 - 18943223
Alignment:
Q  73 tgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccgg 172  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||  | |    
T  18943059 tgatacgtaagggcagggcgaccagtaccggctatccgtatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcgtcag 18943158  T
Q  173 ctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     ||||||||| ||||   |||||||| ||||||||||| ||||||| ||||||||||| ||||||    
T  18943159 gtatatgcaccacatacaggatgatcatcagtgtgtcaagcatctctctggcatgctcttcctct 18943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 45034735 - 45034571
Alignment:
Q  73 tgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccgg 172  Q
    |||||||||||||  |||||| ||||||||| |||| |||||||||||| ||||||||  || ||| |||||||||||| |||||||||||||||| | |    
T  45034735 tgatacgtaagggcggggcgatcagtaccggatatccgcatcacctcctggacaatcttttcattagtcatctcagcttgcctggccacaatatcatcag 45034636  T
Q  173 ctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    |||||||||| || ||  ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  45034635 ctatatgcaccacctcccggatgatcgccagtgtgtcaggcatcttcctgacatgctcctcctct 45034571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 9220 - 9088
Alignment:
Q  103 gctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtca 202  Q
    |||||| |||||||||||| ||||||||||| | || ||||||| |||| |||||||||||||||| | || |||||||| |||||  ||||||||||||    
T  9220 gctatccgcatcacctcctggacaatctcctttctactcatctcggcttgcctggccacaatatcatcagcaatatgcaccacatcccggatgatcgtca 9121  T
Q  203 gtgtgtcaggcatctccctggcatgctcctcct 235  Q
     |||||||||||| |||||||||||||||||||    
T  9120 ctgtgtcaggcatttccctggcatgctcctcct 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 55150902 - 55150735
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||||| |||||  | |||| |||||||||||||||| |||||||||||| || |||| |||| |||| ||| ||||||     
T  55150902 aatctgataagtaagggcagggcgactagtactagttatccgcatcacctcctagacgatctcctctttagtcctctcggcttgcctgaccataatatcg 55150803  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | || |||||||| |||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  55150802 tcagcaatatgcaccacatctcggatgatcatcagtgtgtca-gcatctccctgacatgctcctcctct 55150735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 18908242 - 18908106
Alignment:
Q  93 accagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttgg 192  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||  ||| || |||| |||||||||| ||||  | ||||||||||| |||||   |    
T  18908242 accagtaccggctatccgcatcacctcctggacaatctcctctttaggcatttcggcttgcctggccacagtatcgtcagctatatgcaccacatcccag 18908143  T
Q  193 atgatcgtcagtgtgtcaggcatctccctggcatgct 229  Q
    |||||| ||||||||||||||||||| ||| ||||||    
T  18908142 atgatcatcagtgtgtcaggcatctctctgacatgct 18908106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33100352 - 33100421
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||| ||||||||||    
T  33100352 aatcaaatactctatagacaccaaaacaaaataaaatgccttagaaatagagaacaataacacatgcgaa 33100421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44880001 - 44879932
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  44880001 aatcaaatacttcttagacaccaaaacaaaataaaatattgtagaagtatagaacaataacacatgcgaa 44879932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3917625 - 3917687
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    ||||||||||| ||| ||||||||||||||||||||||||| | |||| ||||||||||||||    
T  3917625 aatcaaatactctattgacaccaaaacaaaataaaataccgcaaaagttgagaacaatagcac 3917687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 19157272 - 19157210
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  19157272 aaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 19157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 25071822 - 25071760
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  25071822 aaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 25071760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29714143 - 29714097
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaag 47  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29714143 aatcaaatactttatagacaccaaaacaaactaaaataccgtagaag 29714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 52448321 - 52448256
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  52448321 aaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaa 52448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 54315422 - 54315507
Alignment:
Q  152 tcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    ||||||||||||||| | |  |||| ||||| |||||   ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  54315422 tcctggccacaatattatcatctatctgcaccacatccctgatgatcgtcaatgtgtcaggcatctctctggcatgctcctcctct 54315507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 27941449 - 27941503
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  27941449 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 27941503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44663097 - 44663165
Alignment:
Q  1 aatcaaatactttatagacacc-----aaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||   |||||||||||||||||||    
T  44663097 aatcaaatactttatagacaccaaaataaaacaaaataaaataccgtaga---agagaacaatagcacatgc 44663165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47185532 - 47185471
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||| || ||||||||||||    
T  47185532 aatcaaatactctatagacatcaaaacaacataaaatatcgtagaaatatagaacaatagca 47185471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10992847 - 10992906
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| |   |||||||||||||||    
T  10992847 aatcaaatattttatagacaccaaaacaaaataaagtaccgtaaa---agagaacaatagcac 10992906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12893483 - 12893428
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaaca 56  Q
    ||||||||||| |||| ||||||||| || ||||||||||| ||||||||||||||    
T  12893483 aatcaaatactctatatacaccaaaataatataaaataccgcagaagtagagaaca 12893428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 10994082 - 10994140
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||| ||||||||||||||||||| ||||||||||||||| || ||||||| |||||||    
T  10994082 tatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaa 10994140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 15761030 - 15760976
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  15761030 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaataacacatg 15760976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 53076901 - 53076955
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  53076901 tatatacaccaaaacaaaataaaaataccgaagaagtagagaaaaatagcacatg 53076955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31884553 - 31884613
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||  ||||| |||||||| ||| |||||||| ||| | ||||||||||||||    
T  31884553 aatcaaatactccatagaaaccaaaactaaacaaaataccataggattagagaacaatagc 31884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 42014202 - 42014034
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||||| || ||||| ||||||| ||||||| |||| ||||||||||||||||    
T  42014202 aatctgatacgtaagggtagggcgaccagtaccggctacccgcatcacctcctggaaaatcttctctttagtcatctcggcttgcctggccacaatatca 42014103  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  42014102 tcagctatatgcaccacatctcggatgatcgtcaatgtgtcaggcatctctctggcatgctcctcctct 42014034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 46526472 - 46526640
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||||||| || |||||||||||||||| ||||||| |||| ||| |||||||||||     
T  46526472 aatctgatacgtaagggcagggcgactagtaccggctatccgcatcacctactggacaatctcctctttagtcatctcggcttgcctagccacaatatcg 46526571  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    ||  |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  46526572 ccaactatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 46526640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 41964397 - 41964229
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||| |||| |||| |||||||||||    
T  41964397 aatctgatacgtaagggcagggcgaccagtaccggctatccgcatcacctcctggaaaatctcctctttagtcatctcggcttgcctgaccacaatatca 41964298  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  |||||| ||| |||||  |||||||||||||| |||||   ||||||||||||||| ||||||||    
T  41964297 tcaactatattcaccacatcccggatgatcgtcagtctgtcaaaaatctccctggcatgcacctcctct 41964229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 6272910 - 6273078
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||     
T  6272910 aatctgatacgtaagggcagggtgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcgtcttgcctggccacaatatcg 6273009  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  |||||||||| |||||   ||||||||| | ||||||||||||||   || ||||||||||||||    
T  6273010 tcaactatatgcaccacatcccagatgatcgttaatgtgtcaggcatctatttgacatgctcctcctct 6273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 10554671 - 10554507
Alignment:
Q  73 tgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccgg 172  Q
    ||||| ||||||| |||||||| |||||  ||||||| ||||||||||| || ||||||||||||| ||||||| |||| |||||||||||||||  |      
T  10554671 tgataagtaagggcagggcgactagtactagctatctacatcacctcctggataatctcctctttagtcatctcggcttgcctggccacaatatcgtcac 10554572  T
Q  173 ctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    | |||||||| |||||  |||||||||||| |||||||||||||||| |||||||||||||||||    
T  10554571 caatatgcaccacatcccggatgatcgtcaatgtgtcaggcatctccttggcatgctcctcctct 10554507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 31593886 - 31593722
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||||| |||||  |||||| ||||||  |||||||| |||||||||||| ||||||| ||||  || |||||||||||     
T  31593886 aatctgataagtaagggcagggcgactagtactagctatccgcatcaaatcctagacgatctcctctttagtcatctcggcttggctagccacaatatcg 31593787  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 233  Q
     | || || ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  31593786 tcagcaatttgcaccacatcccggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 31593722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 3123690 - 3123754
Alignment:
Q  3 tcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  3123690 tcaaatactctatagacaccaaaacaaaataaaataccgtagaaatagataacaatagcacatgc 3123754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 20394711 - 20394776
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20394711 aaatactttatgtacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcacatgcgaa 20394776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 4540040 - 4539974
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4540040 aaatattttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatgcgaa 4539974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 21864037 - 21863972
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21864037 aaatactccataaacaacaaaacaaaataaaataccgtagaagtagagaacaatagcacctgcgaa 21863972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 8113431 - 8113495
Alignment:
Q  6 aatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||| ||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  8113431 aatactctatagacaccaaaacaaaataaaatattgtagaagtatagaacaataacacatgcgaa 8113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13754293 - 13754228
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  13754293 aaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaa 13754228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 1623737 - 1623681
Alignment:
Q  11 tttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  1623737 tttatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 1623681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 8389224 - 8389286
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  8389224 aaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaataacacatg 8389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18667546 - 18667481
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||| ||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  18667546 aaatactctatatacatcaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaa 18667481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24441583 - 24441648
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||||||||||| ||||| ||||||| | ||||||||| | |||||||| ||||||||||||||||    
T  24441583 aatcaaatacttcatagaaaccaaaatagaataaaatatcatagaagtatagaacaatagcacatg 24441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 35477903 - 35477968
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||||||| ||||    
T  35477903 aaatactatatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatccgaa 35477968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 39038170 - 39038228
Alignment:
Q  2 atcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    ||||||||||| | ||||| |||||||||||||||||||||   ||||||||||||||||||    
T  39038170 atcaaatacttcacagacatcaaaacaaaataaaataccgt---agtagagaacaatagcac 39038228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 45075629 - 45075725
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatc 167  Q
    ||||||||||||||||  | || || |||||||||||||| |||||||||| | || ||||||||||||| | ||||| ||| |||  |||||||||||    
T  45075629 aatctgatacgtaaggatatggtgatcagtaccggctatccgcatcacctcttggataatctcctctttatttatctcggctatcc--gccacaatatc 45075725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 9420845 - 9420799
Alignment:
Q  17 gacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  9420845 gacaccaacacataataaaatatcgtagaagtagagaacaatagcac 9420799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 31072457 - 31072511
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  31072457 tatatacaccgaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 31072511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 28507579 - 28507624
Alignment:
Q  192 gatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||    
T  28507579 gatgatcgtcaatgtgtcagacatctctctggcatgctcctcctct 28507624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8070080 - 8070020
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||  ||||| |||||||| |||||||||||| ||| | ||||||||||||||    
T  8070080 aatcaaatactccatagaaaccaaaactaaataaaataccataggattagagaacaatagc 8070020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6189000 - 6189056
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaa 57  Q
    ||||||||||| |||||| |||||||| ||| |||||||| ||| | ||||||||||    
T  6189000 aatcaaatactctatagaaaccaaaactaaacaaaataccataggattagagaacaa 6189056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6195516 - 6195572
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaa 57  Q
    ||||||||||| |||||| |||||||| ||| |||||||| ||| | ||||||||||    
T  6195516 aatcaaatactctatagaaaccaaaactaaacaaaataccataggattagagaacaa 6195572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 12024940 - 12025108
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||     
T  12024940 aatctgatacgtaagggcagggcgaccagtaccgggtatccgcatcacctcctggacaatctcctctttagtcatctcggctttcctggccacaatatcg 12025039  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  |||||||||| |||||| |||||||| |||||||| ||| |||||| ||||||||||||| ||||    
T  12025040 tcatctatatgcaccacatctcggatgatcatcagtgtgccagacatctctctggcatgctccttctct 12025108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 54602605 - 54602773
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||| ||||||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||||| ||||||| |||| |||  ||||||||||     
T  54602605 aatctaatacgtaagggcagggcgaccagtaccaacaatctgcatcacctcctggacaatttcctctttagtcatctcggcttgcctaaccacaatatcg 54602704  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  54602705 tcagctatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctctctggcatgctcctcctct 54602773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 39388867 - 39389035
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| | |||| |||| |||||||||||    
T  39388867 aatctgatacgtaaggtcagggcgaccagtaccggctatccgcatcacctcctgaacaatctcctctttagtcatcccggcttgcctgaccacaatatca 39388966  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | | |||||| || |||||  ||||||||||||||||||||  |||||| ||||||||||||||||||    
T  39388967 tcagttatatgtaccacatcccggatgatcgtcagtgtgtcatacatctcactggcatgctcctcctct 39389035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 16347173 - 16347298
Alignment:
Q  112 atcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtcag 211  Q
    ||||||||||  ||||||||||||||| |||||||  |  ||||||||||||||||| | ||||| ||||| | ||   |||||||||||||||||||||    
T  16347173 atcacctcctgaacaatctcctctttagtcatctcgccgctcctggccacaatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcag 16347272  T
Q  212 gcatctccctggcatgctcctcctct 237  Q
     |||||| ||||||||||||||||||    
T  16347273 acatctctctggcatgctcctcctct 16347298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3665070 - 3665135
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3665070 aatcaaatactatatagacaccaaaacaaaataaaataccatagaagtagagaacaataccacatg 3665135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 52460723 - 52460654
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  52460723 aatcaaatacattgtagacaccgaaacaaaataaaataccgtagaagtagagaacaataacacatgcgaa 52460654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10142699 - 10142634
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||||||||||  ||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  10142699 aatcaaatactgcatagacaccaaaacaaaataaaatgtcgtagaagtatagaacaatagcacatg 10142634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31915650 - 31915585
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||||||  |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  31915650 aatcaaatacactataaacaccaaaacaaaataaaataccatagaagtagacaacaatagcacatg 31915585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 24611029 - 24611078
Alignment:
Q  20 accaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24611029 accaaaacaaaataaaataccgtagaagtagagaac-atagcacatgcgaa 24611078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25201848 - 25201790
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    |||||||||||  ||||||||||| |||| |||||||||||||||||||||||||||||    
T  25201848 aatcaaatactccatagacaccaacacaagataaaataccgtagaagtagagaacaata 25201790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36213910 - 36213848
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||| |||| |||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  36213910 aaatactctataaacaccaaaacaaaataaaataccgtagatgcagagaaaaatagcacatgc 36213848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1842924 - 1842963
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaatacc 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1842924 aatcaaatactttatagacaccaaaacaaaataaaatacc 1842963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 10094955 - 10095009
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  10094955 tatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 10095009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 39480177 - 39480239
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||| |||| |||| ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  39480177 aaatactctatatacacaaaaacaaaataaaatactgtagatgtagagaaaaatagcacatgc 39480239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9921618 - 9921684
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||| ||||||||||||| |||||||||||  |||||   | ||||||||||||||||||||    
T  9921618 aatcaaatacttgatagacaccaaaataaaataaaatattgtaga---aaagaacaatagcacatgcgaa 9921684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 13957785 - 13957742
Alignment:
Q  20 accaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  13957785 accaaaacaaaataaaatatcgtagaagtatagaacaatagcac 13957742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 7413677 - 7413731
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7413677 tatatacaccaaaacaaaataaaaataccgtagaaatagagaaaaatagcacatg 7413731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 7459758 - 7459812
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7459758 tatatacaccaaaacaaaataaaaataccgtagaaatagagaaaaatagcacatg 7459812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 28803827 - 28803885
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||| ||||||||||||||||||| ||||||||||||||| || ||||||| |||||||    
T  28803827 tatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcaaatgcgaa 28803885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9896309 - 9896373
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |   ||||||||||| ||| ||||||    
T  9896309 aatcaaatacttta--gacaccaaaacaaaataaaataccgtata---agagaacaataacacttgcgaa 9896373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 42511284 - 42511326
Alignment:
Q  22 caaaacaaaataaaataccgtagaagtagagaacaatagcaca 64  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||    
T  42511284 caaaacataataaaatatcgtagaagtatagaacaatagcaca 42511326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 20151832 - 20151897
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||| ||||| ||||||||||||||||| | |||||||| ||| ||||  | ||||||||||    
T  20151832 aaatacttaatagaaaccaaaacaaaataaaaaatcgtagaagaagataacatgatcacatgcgaa 20151897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 51759009 - 51758964
Alignment:
Q  25 aacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||||    
T  51759009 aacaaaataaaatattgtagaagtccagaacaatagcacatgcgaa 51758964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21320382 - 21320327
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaa 57  Q
    |||||||||||| ||| ||||||||| ||||||||||| |  |||||||||||||||    
T  21320382 aatcaaatacttcata-acaccaaaataaaataaaatatcaaagaagtagagaacaa 21320327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 34458581 - 34458413
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||| |||| ||||| |||||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||    
T  34458581 aatctgatatgtaagggcagggagaccggtacctgctatctgtatcacctcctggacaatcacctctttaatcatctcggcttgcctggccacaatatca 34458482  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| |||||  | |||||||||||||||||||||||||||||| ||||||||||||||    
T  34458481 tcagctatatgcaccacatcccgaatgatcgtcagtgtgtcaggcatctccctgacatgctcctcctct 34458413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 40612907 - 40613075
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||| ||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||||||    
T  40612907 aatctgatacgtacgggcagggcgatcagtaccggccatccgcatcacctcctagacaatctcctctttagtcatctcggcttgcttggccacaatatca 40613006  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
       |||||||| || |||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  40613007 ttagctatatgaaccacatcccggatgatcgtcagtgtgtcaggcatctctctggcatgctcctcctct 40613075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 31501192 - 31501359
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| | ||||||||||||||||||||  ||||||||||| |||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  31501192 aatctgatacgtaagggcaaggcgaccagtaccggctatccacatcacctcctggacaatatcctctttagtcatctcggcttgcctggccacaatatca 31501291  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctc 236  Q
     | ||||||||||| |||||  |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  31501292 tcagctatatgcaccacatcccggataatcgtcagtttgtcaggcatctctctggcatgctcctcctc 31501359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 4174842 - 4174696
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||  |||||||||||||||    
T  4174842 aatctgatacgtaacggcagggcgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgtctggccacaatatca 4174743  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcat 215  Q
     | ||||||||||| |||||  |||||||||||||||||| ||||||    
T  4174742 tcagctatatgcaccacatcccggatgatcgtcagtgtgttaggcat 4174696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 2119908 - 2120072
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |  ||||| |||||  |||||| |||||||||||| |||||||||||||||| ||||||| ||||  |||||||||||| ||    
T  2119908 aatctgataagtaagggcaacgcgactagtactagctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgtctggccacaatacca 2120007  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 233  Q
     |  ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2120008 tcaactatatgcaccccatctcggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 2120072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 2777213 - 2777045
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| ||||| || |||||  |||||| |||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||     
T  2777213 aatctgataagtaaggggagggccactagtactagctatccgcatcacctcctggacaatctcctctttagtcatctcggcttgcctggccacaatatcg 2777114  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  | |||||||  |||||  |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2777113 tcaacaatatgcatcacatcccggatgatcgtcaatgtgtcaggcatctccctgacatgctcctcctct 2777045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 26393817 - 26393704
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||| |||||||| |||||||  ||||||||||| |||||||||||||||| ||||||| | || |||||||||||||||     
T  26393817 aatctgatacgtaagggcagggcaaccagtactggctatccacatcacctcctggacaatctcctctttagtcatctcggattgcctggccacaatatcg 26393718  T
Q  169 ccggctatatgcac 182  Q
     | |||||||||||    
T  26393717 tcagctatatgcac 26393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 694860 - 694963
Alignment:
Q  134 ctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 233  Q
    ||||| ||||||| |||| ||| |||||||||||| | | ||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  694860 ctttagtcatctcggcttgcctagccacaatatcatcagttatatgcaccacatcccggatgatcgtcagtgtgtcaggcatctccctggcgtgctcctc 694959  T
Q  234 ctct 237  Q
    ||||    
T  694960 ctct 694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 15738271 - 15738439
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||| |||| | | ||| | ||||||||||| ||| | ||||||||| ||||||   |  |||| | |||||||| |    
T  15738271 aatctgatacgtaagggcagggcgaccggtactgccaatccgaatcacctcctaaacagtatcctctttagtcatcttgccgctcctagacacaatatta 15738370  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||| ||||| |||||    |||||||||||||||||||||||||| ||||||||||||||||||    
T  15738371 tcagctatctgcaccacatccctaatgatcgtcagtgtgtcaggcatctctctggcatgctcctcctct 15738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31548784 - 31548853
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||||    
T  31548784 aatcaaatactttataaacaccaaaacaaaataaaatatcatagaagtagagaacaatagcacttgcgaa 31548853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24484815 - 24484749
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||    
T  24484815 aatcaaatactttatagacaccaaaacaaaataaaataccgtaga---agagaacaatagcatatgcgaa 24484749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38565989 - 38566055
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||||||||||||||||||||||| |||||||||||||   |||||| |||||||||||||||    
T  38565989 aatcaaatactttatagacaccaaaacaaaacaaaataccgtaga---agagaataatagcacatgcgaa 38566055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7444100 - 7444038
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  7444100 aaatactctatatacaccaaaacaaaataaaatatcgtagaagtagagaaaaatagcacatgc 7444038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 29902306 - 29902148
Alignment:
Q  79 gtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatat 178  Q
    ||||||| |||||||||||||  | | ||| | ||||||||||  |  |||||||||||| |||||||  |  ||||| ||||||||| | | ||||| |    
T  29902306 gtaagggcagggcgaccagtagtgccaatccgaatcacctcctgaaatatctcctctttagtcatctcgccactcctgaccacaatattatcagctatct 29902207  T
Q  179 gcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    |||| |||||  |||||||||||||||||||  ||||||| || |||||||||||||||    
T  29902206 gcaccacatcccggatgatcgtcagtgtgtcgagcatctctctcgcatgctcctcctct 29902148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6883817 - 6883758
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatag 60  Q
    |||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6883817 aatcaaatactccatagacaccaaaacaaaataagatatcgtagaagtagagaacaatag 6883758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 19508577 - 19508503
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatc 144  Q
    ||||||||||||||||  | | |||||||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  19508577 aatctgatacgtaaggacatg-cgaccagtaccggctatccgcatcacctcctggacaatctcctctttagtcatc 19508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41302211 - 41302277
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||   ||||||||||||||| ||||||    
T  41302211 aatcaaaaactttatagacaccaaaacaaattaaaataccgtaga---agagaacaatagcacctgcgaa 41302277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 6221565 - 6221503
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  6221565 aaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 6221503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19090894 - 19090944
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtaga 51  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19090894 aatcaaatactttatagacaccgaaacaaaataaaatgccgtagaagtaga 19090944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 33015118 - 33015180
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  33015118 aaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 33015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11198919 - 11198988
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||| |||| ||||||||  ||||||||||| |||| ||||||||||||||| ||||||||||    
T  11198919 aatcaaatactctatatacaccaaagtaaaataaaatagcgtaaaagtagagaacaataacacatgcgaa 11198988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 26391594 - 26391541
Alignment:
Q  184 acatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  26391594 acatctcggatgatcgttagtgtgtcaggcatctctctggcatgctcctcctct 26391541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22575910 - 22575970
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacat 65  Q
    ||||||| |||| ||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  22575910 aaatactctatatacaacaaaacaaaataaaataccgtagatgtagagaaaaatagcacat 22575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 26172672 - 26172627
Alignment:
Q  192 gatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  26172672 gatgatcgtcagtgtgtcaggcatctctctggcatactcctcctct 26172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25622004 - 25621946
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||| |||||| ||| ||||||||||||||||||||| |||| ||||| |||||||||    
T  25622004 aatcagatacttcataaacaccaaaacaaaataaaatatcgtaaaagtatagaacaata 25621946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 44313976 - 44314026
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagca 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  44313976 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagca 44314026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 44322155 - 44322205
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagca 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  44322155 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagca 44322205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 14904578 - 14904527
Alignment:
Q  14 atagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacat 65  Q
    ||||||||||||||| ||||||||| | |||||||| |||| ||||||||||    
T  14904578 atagacaccaaaacataataaaatatcatagaagtatagaataatagcacat 14904527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25415333 - 25415391
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    |||||||| ||| ||||||||   ||||||||||||||||||| ||||| ||||||||||||    
T  25415333 aatcaaatgcttcatagacac---aacaaaataaaataccgtaaaagtatagaacaatagca 25415391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 2554226 - 2554173
Alignment:
Q  13 tatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||| ||||| | || |||||||||| |||||||||||    
T  2554226 tatatacaccaaaacaaaatgaaatatcctacaagtagagaaaaatagcacatg 2554173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 41825898 - 41825951
Alignment:
Q  13 tatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    |||| ||||||||||||||| ||||| | || |||||||||| |||||||||||    
T  41825898 tatatacaccaaaacaaaatgaaatatcctacaagtagagaaaaatagcacatg 41825951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7879956 - 7880016
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  7879956 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 7880016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19678534 - 19678474
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||  ||||| |||||||| ||| |||||||| ||| | ||||||||||||||    
T  19678534 aatcaaatactccatagaaaccaaaactaaacaaaataccataggattagagaacaatagc 19678474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45277099 - 45277159
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  45277099 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 45277159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1043 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold1043
Description:

Target: scaffold1043; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 3022 - 3190
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||| | || |||||| |||||||||    
T  3022 aatctgatacgtaagggcagggcgaccagtaccggatatccgcatcacctcctggacaatctcctctttagtcatctcggtttgcctggctacaatatca 3121  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| ||||||  ||||| ||| |||||||||| |||||| ||||||||||||||||||    
T  3122 tcagctatatgcaccacatctcagatgaccgttagtgtgtcagacatctctctggcatgctcctcctct 3190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 19268810 - 19268978
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||  | ||||| ||||||||||||    
T  19268810 aatctgatacgtatgggcagggcgaccagtactggctatctgaatcacctcttggacaatctcctctttaatcatctcgtcgttccttgccacaatatca 19268909  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     | ||||||||||| ||||||  ||||||||||||||||||| |  |||| ||||||||||| ||||||    
T  19268910 tcagctatatgcaccacatctcagatgatcgtcagtgtgtcacgtgtctctctggcatgctcgtcctct 19268978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 5620385 - 5620217
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||||||||||| |||||||| |||| |||||||| |||||||||||| ||||||||| |||||| ||||||| ||||  ||| ||||||||||     
T  5620385 aatctgatacgtaagggcagggcgactagtatcggctatccgcatcacctcctggacaatctcttctttagtcatctcggcttgtctgtccacaatatcg 5620286  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
     |  |||||||||| |||||| |||||||| |||||||||||||||| || ||||||||||| ||||||    
T  5620285 tcaactatatgcaccacatctcggatgatcatcagtgtgtcaggcatatctctggcatgctcgtcctct 5620217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 33523502 - 33523337
Alignment:
Q  69 aatctgatacgtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatca 168  Q
    ||||||||| ||||||| |||||| ||||||| ||||||  | |||||||||| |||||||||||| ||| |||||||  ||||||||||||||||||||    
T  33523502 aatctgatatgtaagggcagggcggccagtactggctattcgtatcacctcctggacaatctcctccttagtcatctcgtctttcctggccacaatatca 33523403  T
Q  169 ccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcct 235  Q
     | | ||||||||| |||||  ||||||||||||||||||||| |||||| || |||||||||||||    
T  33523402 tcagttatatgcaccacatcccggatgatcgtcagtgtgtcagacatctctct-gcatgctcctcct 33523337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 2946241 - 2946134
Alignment:
Q  130 tcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgct 229  Q
    ||||||||| ||||||| |||| |||||||||||||||| |  |||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||    
T  2946241 tcctctttagtcatctcggcttgcctggccacaatatcatcaactatatgcaccacatcccggatgattgtcagtgtgtcaggcatctccctggcatgct 2946142  T
Q  230 cctcctct 237  Q
    ||| ||||    
T  2946141 ccttctct 2946134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15060325 - 15060259
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15060325 aatcaaatactctatagacaccaaaacaaaataaaataccatagaagtagagaacaatagcacatgc 15060259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13758507 - 13758572
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13758507 aatcaaatactctatagacaccaaaacagaataaaataccgtagaagtagagaacaatagcacatg 13758572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26817801 - 26817732
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26817801 aatcaaatactgtatagacactcaaacaaaataaaatatcgtagaagtagagaacaatagcacatgcgaa 26817732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 11680402 - 11680463
Alignment:
Q  8 tactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  11680402 tactttatagacactaaa-caaaataaaatatcgtagaagtatagaacaatagcacatgcgaa 11680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 33522380 - 33522538
Alignment:
Q  79 gtaagggaagggcgaccagtaccggctatctgcatcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatat 178  Q
    ||||||| | |||||| ||||||| ||||  |||| ||||||| || |||||||| |||| ||   || || || ||||| ||||||||| | |||||||    
T  33522380 gtaagggcaaggcgactagtaccgactattcgcataacctcctggaaaatctcctttttagtcccgtcggcctttctggcaacaatatcatcagctatat 33522479  T
Q  179 gcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctcctct 237  Q
    |||| |||||| |||||||| ||| |||||||| ||| || |||||||| | |||||||    
T  33522480 gcaccacatctcggatgatcttcaatgtgtcagacatatctctggcatgatactcctct 33522538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 34043723 - 34043661
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  34043723 aaatattttatacacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagcacatg 34043661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 20990617 - 20990552
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  20990617 aaatactctatatacaccaaaacaaaatgaaatatcgtacaagtagagaaaaatagcacatgcgaa 20990552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22525053 - 22524995
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagca 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||||||    
T  22525053 aatcaaatactttatagacatcaaaacaaaataaaataccataga---agagaacaatagca 22524995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 1603548 - 1603486
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  1603548 aaatattttatacacaccaaaccaaaataaaaataccgtagaagtagagaaaaatagcacatg 1603486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15603699 - 15603761
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    |||||||||||| ||| |||  |||||||||||||||| | ||||||||||||||||||||||    
T  15603699 aatcaaatacttcataaacattaaaacaaaataaaatatcatagaagtagagaacaatagcac 15603761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 21442816 - 21442754
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagcacatg 66  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  21442816 aaatattttatatacaccaaaacaaaataaaaataccgtagaagtagaaaaaaatagcacatg 21442754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 23058713 - 23058627
Alignment:
Q  124 acaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtca 210  Q
    ||||||||||||||| |||||||| |  || |||||||||||||| | ||||| ||||| |||||| |||||||| |||||| ||||    
T  23058713 acaatctcctctttagtcatctcaccgctcatggccacaatatcatcagctatctgcaccacatctcggatgatcctcagtgggtca 23058627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 1423133 - 1423072
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  1423133 aaatactctatatacaccaaaacaaaataaaatatcgtaggagtagagaaaaataacacatg 1423072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 1831304 - 1831263
Alignment:
Q  18 acaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  1831304 acaccaaaacaaaataaaataccgcagaagtagagaacaata 1831263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 18675531 - 18675466
Alignment:
Q  5 aaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||||||||||||||||| || || ||||||||| |||| ||||||||||    
T  18675531 aaatactctatatacaccaaaacaaaataaaatatcgcaggagtagagaaaaataacacatgcgaa 18675466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 1131939 - 1131891
Alignment:
Q  18 acaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatg 66  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  1131939 acaccaaaacaaaataaaatatcgtagaagtagagaaaaatagtacatg 1131891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19108274 - 19108208
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||   | |||| |||||||||||||||    
T  19108274 aatcaaataatttatagacaccaaaacaaaataaaataatgtaga---aaagaaaaatagcacatgcgaa 19108208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31130115 - 31130049
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||| | |||| |||||||||||||| ||| ||||   ||||||||||||||||||||||    
T  31130115 aatcaaatactttacaaacactaaaacaaaataaaaaaccttaga---agagaacaatagcacatgcgaa 31130049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3228984 - 3229030
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaag 47  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||||    
T  3228984 aatcaaatacattataaataccaaaacaaaataaaataccgtagaag 3229030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 22012049 - 22012099
Alignment:
Q  13 tatagacaccaaaacaaaataaaa-taccgtagaagtagagaacaatagca 62  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  22012049 tatatacaccaaaacaaaataaaaataccgtagaagtagagaaaaatagca 22012099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33516223 - 33516283
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagc 61  Q
    |||||||||||| ||||| |||||||| ||| |||||||  ||| | ||||||||||||||    
T  33516223 aatcaaatacttcatagaaaccaaaactaaacaaaatactataggattagagaacaatagc 33516283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 45688 - 45563
Alignment:
Q  112 atcacctcctagacaatctcctctttaatcatctcagctttcctggccacaatatcaccggctatatgcacaacatcttggatgatcgtcagtgtgtcag 211  Q
    ||||||||||  ||||||||||||||| |||||||  |  ||||||||||||||||| | ||||| ||||| | ||   |||||||||||||||||||||    
T  45688 atcacctcctgaacaatctcctctttagtcatctcgccgctcctggccacaatatcatcagctatctgcaccatattccggatgatcgtcagtgtgtcag 45589  T
Q  212 gcatctccctggcatgctcctcctct 237  Q
     |||||| ||||||||||||||||||    
T  45588 acatctctctggcatgctcctcctct 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41154 - 41088
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    |||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||| |||||||    
T  41154 aatcaaatactttatagacaccaaaacaaaataaaatatcgtaga---agagaacaatagcatatgcgaa 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1755 - 1697
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  1755 aatcaaacacttcatagacagcaaaccaaaataaaataccgtagaagtagagaacaata 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1150 - 1084
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgc 67  Q
    |||||||||||  ||||||||||||||||||||||||| | ||||| || |||||||||||||||||    
T  1150 aatcaaatactccatagacaccaaaacaaaataaaatatcatagaaatatagaacaatagcacatgc 1084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1289 - 1220
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcacatgcgaa 70  Q
    ||||||| |||| ||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||||||    
T  1289 aatcaaacacttcatagacatcaaaccaaaataaaataccgtagaagtagaaaacaataacacttgcgaa 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 62909 - 62964
Alignment:
Q  178 tgcacaacatcttggatgatcgtcagtgtgtcaggcatctccctggcatgctcctc 233  Q
    ||||| ||||| | ||||||||||| ||||||||||||||| ||||||||||||||    
T  62909 tgcacgacatccttgatgatcgtcaatgtgtcaggcatctctctggcatgctcctc 62964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18263 - 18321
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaata 59  Q
    ||||||| | || ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  18263 aatcaaacatttaatagacagcaaaccaaaataaaataccatagaagtagagaacaata 18321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21101 - 21162
Alignment:
Q  1 aatcaaatactttatagacaccaaaacaaaataaaataccgtagaagtagagaacaatagcac 63  Q
    ||||||||||| ||| |||||||||||||| |||||||||| | |||| ||||||||||||||    
T  21101 aatcaaatactctattgacaccaaaacaaa-taaaataccgcaaaagttgagaacaatagcac 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University