View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11768_high_51 (Length: 275)

Name: NF11768_high_51
Description: NF11768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11768_high_51
NF11768_high_51
[»] chr2 (68 HSPs)
chr2 (1-130)||(37990008-37990137)
chr2 (1-128)||(3055564-3055691)
chr2 (1-127)||(41478637-41478763)
chr2 (1-126)||(44398692-44398817)
chr2 (1-125)||(13197710-13197834)
chr2 (1-125)||(15896848-15896972)
chr2 (1-126)||(44397553-44397678)
chr2 (1-127)||(6648517-6648643)
chr2 (1-127)||(9047753-9047879)
chr2 (1-127)||(16243781-16243907)
chr2 (1-127)||(37666608-37666734)
chr2 (1-126)||(38917521-38917646)
chr2 (1-125)||(15372232-15372356)
chr2 (1-125)||(16044317-16044441)
chr2 (1-126)||(13344490-13344615)
chr2 (1-125)||(12337937-12338061)
chr2 (6-127)||(41492894-41493015)
chr2 (1-126)||(30099181-30099306)
chr2 (1-106)||(4683951-4684056)
chr2 (1-127)||(12170397-12170523)
chr2 (23-122)||(44804581-44804680)
chr2 (14-122)||(16734802-16734910)
chr2 (6-125)||(13724102-13724221)
chr2 (1-116)||(31150659-31150769)
chr2 (26-85)||(41453090-41453149)
chr2 (1-129)||(41478645-41478773)
chr2 (1-127)||(15372224-15372350)
chr2 (1-127)||(37990019-37990145)
chr2 (1-126)||(3055557-3055682)
chr2 (1-126)||(15896841-15896966)
chr2 (1-126)||(44398685-44398810)
chr2 (1-125)||(13197716-13197840)
chr2 (6-126)||(23227271-23227391)
chr2 (1-128)||(13724108-13724235)
chr2 (3-126)||(44397546-44397669)
chr2 (69-126)||(4684006-4684063)
chr2 (69-130)||(16044391-16044452)
chr2 (5-90)||(36688892-36688977)
chr2 (1-114)||(41492902-41493015)
chr2 (69-125)||(37666684-37666740)
chr2 (4-124)||(45294333-45294452)
chr2 (69-127)||(23227346-23227404)
chr2 (5-115)||(23986788-23986898)
chr2 (1-114)||(15271060-15271173)
chr2 (2-119)||(16243790-16243907)
chr2 (1-94)||(30852648-30852741)
chr2 (1-126)||(38917528-38917653)
chr2 (10-66)||(4553069-4553125)
chr2 (1-125)||(6648525-6648649)
chr2 (1-41)||(9047761-9047801)
chr2 (1-41)||(12337943-12337983)
chr2 (69-125)||(31150653-31150709)
chr2 (69-129)||(39724284-39724344)
chr2 (1-128)||(13344481-13344608)
chr2 (69-128)||(40714016-40714075)
chr2 (97-127)||(13775832-13775862)
chr2 (9-111)||(36089457-36089559)
chr2 (97-130)||(7765788-7765821)
chr2 (9-126)||(20900678-20900794)
chr2 (97-126)||(30852719-30852748)
chr2 (97-126)||(42263468-42263497)
chr2 (69-125)||(12170473-12170529)
chr2 (1-41)||(16044323-16044363)
chr2 (71-111)||(20900678-20900718)
chr2 (1-41)||(30099188-30099228)
chr2 (71-115)||(36688892-36688936)
chr2 (1-41)||(37666616-37666656)
chr2 (1-41)||(44804584-44804624)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-125)||(49511-49635)
scaffold0009 (1-131)||(49499-49629)
[»] chr3 (74 HSPs)
chr3 (1-128)||(10297985-10298112)
chr3 (1-135)||(40690986-40691120)
chr3 (1-130)||(17653718-17653847)
chr3 (1-126)||(49823380-49823505)
chr3 (1-125)||(19557052-19557176)
chr3 (1-126)||(22721937-22722062)
chr3 (1-126)||(37508927-37509052)
chr3 (1-125)||(2787832-2787956)
chr3 (1-125)||(34080030-34080154)
chr3 (1-125)||(48340403-48340527)
chr3 (4-127)||(8817384-8817507)
chr3 (1-126)||(4238600-4238725)
chr3 (1-126)||(8437431-8437556)
chr3 (1-130)||(44785391-44785520)
chr3 (1-126)||(46208036-46208161)
chr3 (1-126)||(51406679-51406804)
chr3 (1-125)||(21295326-21295450)
chr3 (1-125)||(38964398-38964522)
chr3 (4-122)||(9111497-9111615)
chr3 (1-122)||(42507358-42507479)
chr3 (1-129)||(36095676-36095804)
chr3 (1-125)||(6013336-6013460)
chr3 (1-125)||(42170346-42170470)
chr3 (4-125)||(35513482-35513603)
chr3 (2-126)||(33942931-33943055)
chr3 (1-125)||(9213522-9213646)
chr3 (3-125)||(5323214-5323337)
chr3 (4-125)||(34988084-34988205)
chr3 (71-128)||(9027139-9027196)
chr3 (1-126)||(46208029-46208154)
chr3 (1-129)||(9213512-9213640)
chr3 (1-125)||(17653712-17653836)
chr3 (1-125)||(37508921-37509045)
chr3 (1-127)||(21295332-21295458)
chr3 (9-128)||(26019477-26019595)
chr3 (1-127)||(4238592-4238718)
chr3 (1-127)||(34080036-34080162)
chr3 (1-126)||(19557058-19557183)
chr3 (2-127)||(22721929-22722054)
chr3 (7-80)||(43323072-43323145)
chr3 (1-126)||(49823387-49823512)
chr3 (1-125)||(10297979-10298103)
chr3 (2-129)||(8817393-8817520)
chr3 (69-128)||(44785470-44785529)
chr3 (71-125)||(2131748-2131802)
chr3 (12-78)||(8951943-8952009)
chr3 (10-95)||(29285790-29285873)
chr3 (1-127)||(38964390-38964516)
chr3 (5-127)||(42170356-42170478)
chr3 (1-127)||(42507361-42507487)
chr3 (2-91)||(8092595-8092684)
chr3 (1-50)||(33128212-33128261)
chr3 (69-126)||(36095754-36095811)
chr3 (1-128)||(9111500-9111627)
chr3 (29-125)||(30443762-30443858)
chr3 (10-126)||(33128205-33128319)
chr3 (69-125)||(35513473-35513529)
chr3 (1-125)||(48340397-48340521)
chr3 (75-126)||(34988074-34988125)
chr3 (69-119)||(2787906-2787956)
chr3 (1-127)||(8437423-8437549)
chr3 (1-119)||(40691002-40691120)
chr3 (1-122)||(6013342-6013463)
chr3 (66-127)||(45652067-45652128)
chr3 (69-113)||(43323072-43323116)
chr3 (1-125)||(51406673-51406797)
chr3 (5-48)||(26001141-26001184)
chr3 (1-95)||(2131702-2131796)
chr3 (69-126)||(33943006-33943063)
chr3 (1-41)||(2787838-2787878)
chr3 (1-41)||(9027148-9027188)
chr3 (63-127)||(34381465-34381529)
chr3 (98-126)||(40215022-40215050)
chr3 (1-41)||(44785402-44785442)
[»] chr8 (68 HSPs)
chr8 (1-127)||(7785776-7785902)
chr8 (1-126)||(54611-54736)
chr8 (1-126)||(2890161-2890286)
chr8 (1-134)||(32114466-32114599)
chr8 (1-125)||(6552661-6552785)
chr8 (1-128)||(39571200-39571327)
chr8 (1-127)||(7805697-7805823)
chr8 (1-127)||(44498185-44498311)
chr8 (1-126)||(43199353-43199478)
chr8 (1-125)||(3304278-3304402)
chr8 (1-129)||(12763650-12763778)
chr8 (1-128)||(32211360-32211487)
chr8 (1-126)||(25600999-25601124)
chr8 (1-129)||(15888348-15888476)
chr8 (1-125)||(31654619-31654743)
chr8 (1-125)||(33289261-33289385)
chr8 (1-119)||(12343146-12343264)
chr8 (1-129)||(7012177-7012305)
chr8 (9-126)||(13578871-13578988)
chr8 (1-126)||(8587176-8587301)
chr8 (1-126)||(28463617-28463742)
chr8 (1-127)||(27422199-27422322)
chr8 (1-57)||(4245649-4245705)
chr8 (7-118)||(24691986-24692096)
chr8 (1-110)||(17006917-17007026)
chr8 (1-110)||(17570221-17570330)
chr8 (1-126)||(33057600-33057725)
chr8 (69-125)||(8587170-8587226)
chr8 (69-120)||(28463616-28463667)
chr8 (1-127)||(54618-54744)
chr8 (1-127)||(2890168-2890294)
chr8 (1-127)||(7785784-7785910)
chr8 (1-126)||(25601006-25601131)
chr8 (1-126)||(43199360-43199485)
chr8 (69-129)||(4245655-4245715)
chr8 (1-125)||(6552655-6552779)
chr8 (1-125)||(12343146-12343270)
chr8 (30-118)||(13246801-13246889)
chr8 (1-125)||(31654613-31654737)
chr8 (69-127)||(7805773-7805831)
chr8 (4-49)||(27422266-27422311)
chr8 (69-125)||(3304352-3304408)
chr8 (69-125)||(15888426-15888482)
chr8 (74-122)||(17006914-17006962)
chr8 (74-122)||(17570285-17570333)
chr8 (72-124)||(30171483-30171535)
chr8 (69-125)||(32114549-32114605)
chr8 (1-125)||(39571209-39571333)
chr8 (69-125)||(44498261-44498317)
chr8 (2-52)||(13246801-13246851)
chr8 (71-117)||(15688038-15688084)
chr8 (7-109)||(24202989-24203091)
chr8 (1-127)||(33289267-33289393)
chr8 (69-126)||(12763728-12763785)
chr8 (71-128)||(24692054-24692111)
chr8 (81-126)||(32211449-32211494)
chr8 (10-90)||(28999083-28999163)
chr8 (71-127)||(33057592-33057648)
chr8 (58-109)||(35564706-35564757)
chr8 (79-125)||(7012171-7012217)
chr8 (1-39)||(32211369-32211407)
chr8 (1-41)||(3304284-3304324)
chr8 (1-41)||(7012255-7012295)
chr8 (1-41)||(7805705-7805745)
chr8 (1-41)||(12763660-12763700)
chr8 (98-126)||(41915592-41915620)
chr8 (92-128)||(43332556-43332592)
chr8 (1-41)||(44498193-44498233)
[»] chr7 (52 HSPs)
chr7 (1-127)||(1738445-1738571)
chr7 (1-127)||(7240755-7240881)
chr7 (1-125)||(46840866-46840990)
chr7 (1-127)||(7482231-7482357)
chr7 (1-127)||(38063911-38064037)
chr7 (5-126)||(9268766-9268887)
chr7 (1-125)||(22285705-22285829)
chr7 (1-125)||(23314139-23314263)
chr7 (1-125)||(31319399-31319523)
chr7 (1-127)||(36583401-36583527)
chr7 (1-126)||(1565728-1565853)
chr7 (1-125)||(94318-94442)
chr7 (1-126)||(28536750-28536875)
chr7 (1-125)||(36016196-36016320)
chr7 (1-125)||(38441466-38441590)
chr7 (1-126)||(4790254-4790379)
chr7 (11-119)||(33418392-33418500)
chr7 (1-118)||(40840126-40840243)
chr7 (5-125)||(9575419-9575539)
chr7 (1-118)||(7269412-7269529)
chr7 (7-126)||(7661088-7661207)
chr7 (1-128)||(46840857-46840984)
chr7 (1-127)||(1738453-1738579)
chr7 (1-127)||(7240747-7240873)
chr7 (1-127)||(22285697-22285823)
chr7 (69-125)||(36016270-36016326)
chr7 (69-128)||(1565803-1565862)
chr7 (1-119)||(94324-94442)
chr7 (1-126)||(7482224-7482349)
chr7 (1-127)||(9268754-9268880)
chr7 (5-126)||(7661075-7661196)
chr7 (67-128)||(9575406-9575467)
chr7 (69-126)||(28536825-28536882)
chr7 (69-126)||(38063987-38064044)
chr7 (69-125)||(23314213-23314269)
chr7 (69-125)||(31319473-31319529)
chr7 (1-125)||(36583395-36583519)
chr7 (71-125)||(7269481-7269535)
chr7 (69-127)||(24710743-24710801)
chr7 (1-126)||(4790247-4790372)
chr7 (1-125)||(38441460-38441584)
chr7 (71-124)||(46877666-46877719)
chr7 (1-41)||(23314145-23314185)
chr7 (78-118)||(29993251-29993291)
chr7 (1-41)||(33418460-33418500)
chr7 (2-41)||(40840126-40840165)
chr7 (2-49)||(46877666-46877713)
chr7 (100-130)||(28677311-28677341)
chr7 (97-126)||(5347721-5347750)
chr7 (1-41)||(31319405-31319445)
chr7 (5-41)||(36016206-36016242)
chr7 (5-41)||(38063923-38063959)
[»] chr6 (53 HSPs)
chr6 (1-127)||(26602329-26602455)
chr6 (1-126)||(6330121-6330246)
chr6 (1-126)||(11572144-11572269)
chr6 (1-125)||(2830341-2830465)
chr6 (1-129)||(8099536-8099664)
chr6 (1-125)||(8382969-8383093)
chr6 (4-126)||(13853592-13853714)
chr6 (1-128)||(9644702-9644829)
chr6 (1-128)||(9650719-9650846)
chr6 (1-128)||(33052791-33052918)
chr6 (1-126)||(35031000-35031125)
chr6 (1-126)||(6068572-6068697)
chr6 (5-125)||(8417793-8417913)
chr6 (1-125)||(6143560-6143684)
chr6 (11-126)||(28747133-28747248)
chr6 (25-125)||(17992018-17992118)
chr6 (1-126)||(22896477-22896593)
chr6 (1-87)||(13043764-13043850)
chr6 (7-126)||(3788048-3788168)
chr6 (10-130)||(7596972-7597092)
chr6 (3-91)||(6068974-6069062)
chr6 (5-126)||(14936456-14936577)
chr6 (1-126)||(8099529-8099654)
chr6 (1-127)||(8382975-8383101)
chr6 (1-126)||(2830334-2830459)
chr6 (1-126)||(11572151-11572276)
chr6 (1-125)||(6330115-6330239)
chr6 (14-110)||(6549902-6549997)
chr6 (1-125)||(26602323-26602447)
chr6 (4-127)||(8417802-8417925)
chr6 (71-125)||(8186443-8186497)
chr6 (1-127)||(13853599-13853725)
chr6 (69-127)||(14936531-14936589)
chr6 (69-127)||(33052868-33052926)
chr6 (1-51)||(3788111-3788161)
chr6 (1-127)||(6068564-6068690)
chr6 (3-128)||(8186366-8186489)
chr6 (69-119)||(31849586-31849636)
chr6 (69-126)||(6143553-6143610)
chr6 (84-125)||(22896471-22896512)
chr6 (69-126)||(35031075-35031132)
chr6 (1-41)||(9644780-9644820)
chr6 (1-41)||(9650797-9650837)
chr6 (24-126)||(5685368-5685470)
chr6 (1-39)||(35031007-35031045)
chr6 (5-110)||(3421588-3421693)
chr6 (84-125)||(9644696-9644737)
chr6 (84-125)||(9650713-9650754)
chr6 (6-39)||(12473651-12473684)
chr6 (69-117)||(6069014-6069062)
chr6 (81-125)||(13043758-13043802)
chr6 (58-106)||(33393165-33393213)
chr6 (97-129)||(33859611-33859643)
[»] chr5 (63 HSPs)
chr5 (1-127)||(9395356-9395482)
chr5 (1-129)||(41989403-41989531)
chr5 (1-127)||(13103030-13103156)
chr5 (1-126)||(36563537-36563662)
chr5 (1-125)||(37148955-37149079)
chr5 (1-127)||(13033057-13033183)
chr5 (1-126)||(11795174-11795299)
chr5 (5-125)||(23359952-23360072)
chr5 (1-126)||(17025630-17025755)
chr5 (1-125)||(20848080-20848203)
chr5 (1-127)||(26350348-26350474)
chr5 (1-126)||(37641959-37642085)
chr5 (1-125)||(582995-583118)
chr5 (19-126)||(21575970-21576077)
chr5 (4-122)||(4443969-4444087)
chr5 (16-125)||(6126845-6126954)
chr5 (1-66)||(38361750-38361815)
chr5 (9-119)||(3549553-3549663)
chr5 (19-111)||(2366352-2366444)
chr5 (2-83)||(13539909-13539986)
chr5 (4-127)||(966157-966280)
chr5 (1-130)||(17025619-17025748)
chr5 (1-125)||(9395350-9395474)
chr5 (44-127)||(35904448-35904529)
chr5 (1-108)||(2629561-2629668)
chr5 (67-130)||(4443955-4444018)
chr5 (1-128)||(36563544-36563671)
chr5 (1-112)||(39290781-39290891)
chr5 (69-127)||(37149029-37149087)
chr5 (69-126)||(13033050-13033107)
chr5 (1-126)||(13103023-13103148)
chr5 (1-126)||(23359941-23360066)
chr5 (10-117)||(36595782-36595886)
chr5 (1-126)||(41989413-41989538)
chr5 (58-122)||(9006885-9006949)
chr5 (69-125)||(26350424-26350480)
chr5 (10-109)||(40138806-40138906)
chr5 (69-127)||(582987-583045)
chr5 (1-39)||(11574166-11574204)
chr5 (69-127)||(20848072-20848130)
chr5 (10-111)||(18167334-18167435)
chr5 (30-91)||(39030587-39030648)
chr5 (1-49)||(966224-966272)
chr5 (1-41)||(6126908-6126948)
chr5 (1-125)||(11795168-11795292)
chr5 (69-125)||(39290775-39290830)
chr5 (2-84)||(27080981-27081063)
chr5 (68-118)||(27081013-27081063)
chr5 (81-127)||(37641951-37641997)
chr5 (95-125)||(38361713-38361743)
chr5 (98-127)||(1643466-1643495)
chr5 (1-50)||(3549553-3549602)
chr5 (76-125)||(11574161-11574210)
chr5 (81-118)||(13539949-13539986)
chr5 (72-129)||(35584450-35584507)
chr5 (9-53)||(2366352-2366396)
chr5 (1-49)||(4444036-4444084)
chr5 (1-49)||(13033127-13033175)
chr5 (1-41)||(21576030-21576070)
chr5 (60-128)||(26395082-26395150)
chr5 (3-39)||(36595782-36595818)
chr5 (1-41)||(37148961-37149001)
chr5 (1-41)||(37642038-37642078)
[»] chr1 (70 HSPs)
chr1 (1-127)||(14984843-14984969)
chr1 (1-125)||(27159358-27159482)
chr1 (1-125)||(31842795-31842919)
chr1 (1-125)||(39401966-39402090)
chr1 (1-125)||(44668093-44668217)
chr1 (1-127)||(9981653-9981779)
chr1 (1-127)||(12483626-12483752)
chr1 (1-126)||(47216698-47216823)
chr1 (1-129)||(1050894-1051022)
chr1 (1-125)||(11795939-11796063)
chr1 (1-125)||(26471065-26471189)
chr1 (1-128)||(34042702-34042829)
chr1 (3-125)||(47777481-47777603)
chr1 (1-119)||(44955212-44955330)
chr1 (7-126)||(25694331-25694450)
chr1 (124-257)||(31159108-31159242)
chr1 (5-127)||(47588335-47588457)
chr1 (1-105)||(23278021-23278125)
chr1 (1-127)||(47969700-47969827)
chr1 (5-126)||(17556762-17556884)
chr1 (1-128)||(11897060-11897187)
chr1 (1-125)||(16448108-16448232)
chr1 (10-125)||(11989796-11989911)
chr1 (1-126)||(37552147-37552272)
chr1 (1-115)||(12213484-12213598)
chr1 (1-127)||(12483634-12483760)
chr1 (71-126)||(16448184-16448239)
chr1 (1-126)||(11897053-11897178)
chr1 (1-127)||(27159364-27159490)
chr1 (3-125)||(37552141-37552263)
chr1 (1-127)||(44668099-44668225)
chr1 (1-126)||(9981646-9981771)
chr1 (44-128)||(1598379-1598461)
chr1 (1-125)||(31842801-31842925)
chr1 (1-125)||(39401972-39402096)
chr1 (1-125)||(44955212-44955336)
chr1 (1-128)||(11795930-11796057)
chr1 (7-118)||(12043616-12043726)
chr1 (1-128)||(14984834-14984961)
chr1 (69-127)||(26471139-26471197)
chr1 (69-125)||(47216773-47216829)
chr1 (1-117)||(47777487-47777603)
chr1 (79-130)||(1050883-1050934)
chr1 (60-127)||(5392211-5392278)
chr1 (6-111)||(12047117-12047223)
chr1 (67-126)||(12213546-12213605)
chr1 (1-126)||(17556751-17556877)
chr1 (1-127)||(25694317-25694443)
chr1 (29-110)||(571542-571622)
chr1 (1-126)||(34042695-34042820)
chr1 (3-115)||(12062568-12062679)
chr1 (5-117)||(12062568-12062679)
chr1 (71-127)||(21537945-21538001)
chr1 (81-125)||(23278087-23278131)
chr1 (67-125)||(47969694-47969753)
chr1 (29-91)||(3739838-3739900)
chr1 (31-125)||(19391910-19392004)
chr1 (31-89)||(29855084-29855142)
chr1 (69-127)||(47588411-47588469)
chr1 (74-127)||(5392145-5392198)
chr1 (4-53)||(5392218-5392267)
chr1 (18-87)||(11774536-11774605)
chr1 (65-130)||(19610775-19610840)
chr1 (1-49)||(1050964-1051012)
chr1 (8-116)||(12069499-12069607)
chr1 (1-125)||(21537869-21537993)
chr1 (1-41)||(26471071-26471111)
chr1 (30-126)||(30800460-30800556)
chr1 (14-90)||(33668748-33668824)
chr1 (1-41)||(47216705-47216745)
[»] chr4 (76 HSPs)
chr4 (1-125)||(47833617-47833741)
chr4 (1-127)||(48336269-48336395)
chr4 (1-126)||(3904682-3904807)
chr4 (1-126)||(53337376-53337501)
chr4 (1-125)||(3372127-3372251)
chr4 (1-125)||(6121893-6122017)
chr4 (1-125)||(20538686-20538810)
chr4 (1-126)||(3992982-3993107)
chr4 (1-126)||(24704376-24704501)
chr4 (1-125)||(42797738-42797862)
chr4 (1-125)||(46797731-46797855)
chr4 (4-127)||(33621805-33621928)
chr4 (9-127)||(5986890-5987008)
chr4 (1-127)||(47838615-47838741)
chr4 (1-126)||(52756681-52756806)
chr4 (1-125)||(43900555-43900679)
chr4 (1-125)||(51894582-51894706)
chr4 (4-127)||(41469764-41469887)
chr4 (7-127)||(3422073-3422192)
chr4 (1-125)||(7579316-7579440)
chr4 (1-129)||(40913185-40913313)
chr4 (7-125)||(41615676-41615794)
chr4 (1-106)||(33551207-33551312)
chr4 (1-106)||(26231583-26231688)
chr4 (1-128)||(17344219-17344346)
chr4 (5-94)||(25855093-25855182)
chr4 (6-125)||(29845656-29845769)
chr4 (10-112)||(50430431-50430533)
chr4 (69-126)||(17236862-17236919)
chr4 (1-125)||(4780302-4780425)
chr4 (1-129)||(43900545-43900673)
chr4 (1-127)||(42797730-42797856)
chr4 (1-127)||(47833609-47833735)
chr4 (1-73)||(17236839-17236912)
chr4 (1-49)||(4780371-4780419)
chr4 (1-125)||(24704370-24704494)
chr4 (1-127)||(3372119-3372245)
chr4 (1-127)||(3992974-3993100)
chr4 (10-116)||(43095230-43095336)
chr4 (1-123)||(44900086-44900208)
chr4 (54-120)||(45478151-45478217)
chr4 (1-127)||(48336261-48336387)
chr4 (1-127)||(51894588-51894714)
chr4 (1-126)||(3904689-3904814)
chr4 (1-126)||(7579309-7579434)
chr4 (10-91)||(31013036-31013117)
chr4 (69-126)||(33551200-33551257)
chr4 (69-126)||(40913263-40913320)
chr4 (1-126)||(47838623-47838748)
chr4 (1-125)||(6121899-6122023)
chr4 (69-125)||(20538760-20538816)
chr4 (44-116)||(45725905-45725977)
chr4 (1-125)||(53337370-53337494)
chr4 (9-95)||(9876653-9876739)
chr4 (71-125)||(1716301-1716355)
chr4 (1-51)||(5986950-5987000)
chr4 (80-126)||(26231576-26231622)
chr4 (75-125)||(44900080-44900130)
chr4 (1-113)||(1716307-1716417)
chr4 (69-126)||(25855082-25855139)
chr4 (1-106)||(41594660-41594765)
chr4 (1-41)||(3422144-3422184)
chr4 (1-41)||(40913195-40913235)
chr4 (1-41)||(41469772-41469812)
chr4 (69-125)||(46797725-46797781)
chr4 (1-41)||(46797809-46797849)
chr4 (6-85)||(6924724-6924802)
chr4 (69-128)||(41469840-41469899)
chr4 (2-113)||(41615683-41615794)
chr4 (58-127)||(6422530-6422600)
chr4 (1-39)||(20538692-20538730)
chr4 (71-125)||(41594654-41594708)
chr4 (69-119)||(52756681-52756731)
chr4 (69-110)||(50430492-50430533)
chr4 (9-49)||(32822285-32822325)
chr4 (1-41)||(33621880-33621920)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-127)||(12866-12992)
scaffold0482 (1-127)||(12858-12984)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-127)||(23791-23917)
scaffold0204 (1-127)||(23783-23909)
[»] scaffold0464 (3 HSPs)
scaffold0464 (1-127)||(6129-6255)
scaffold0464 (79-125)||(6215-6261)
scaffold0464 (1-41)||(6137-6177)
[»] scaffold1707 (2 HSPs)
scaffold1707 (2-113)||(1342-1453)
scaffold1707 (69-118)||(1342-1391)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-128)||(231300-231427)
scaffold0011 (71-125)||(231379-231433)
scaffold0011 (1-41)||(231309-231349)
[»] scaffold0415 (1 HSPs)
scaffold0415 (6-125)||(13731-13845)
[»] scaffold0650 (2 HSPs)
scaffold0650 (1-109)||(1-108)
scaffold0650 (69-126)||(59-115)
[»] scaffold0171 (2 HSPs)
scaffold0171 (1-91)||(12387-12477)
scaffold0171 (77-122)||(12435-12480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-120)||(312747-312843)
[»] scaffold0007 (2 HSPs)
scaffold0007 (98-127)||(77466-77495)
scaffold0007 (97-125)||(77344-77372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (97-126)||(492303-492332)
[»] scaffold0236 (1 HSPs)
scaffold0236 (100-128)||(16772-16800)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37990137 - 37990008
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37990137 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37990038  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    ||||||||||||||||||||||||||||||    
T  37990037 cttataaataggaccggagggagtatttta 37990008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3055564 - 3055691
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3055564 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 3055663  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  3055664 cttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 41478763 - 41478637
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41478763 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 41478664  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  41478663 cttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44398692 - 44398817
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44398692 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44398791  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  44398792 cttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13197834 - 13197710
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13197834 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 13197735  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  13197734 cttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15896848 - 15896972
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15896848 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 15896947  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  15896948 cttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44397553 - 44397678
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44397553 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44397652  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  44397653 cttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6648643 - 6648517
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6648643 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6648544  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  6648543 cttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9047879 - 9047753
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9047879 ctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9047780  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  9047779 cttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16243907 - 16243781
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 16243808  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||| ||||||||    
T  16243807 cttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 37666734 - 37666608
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  37666734 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 37666635  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  37666634 cttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38917646 - 38917521
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38917646 ctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 38917547  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  38917546 cttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15372232 - 15372356
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  15372232 ctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattct 15372331  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  15372332 cttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16044441 - 16044317
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16044441 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 16044342  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  16044341 cttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13344490 - 13344615
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  13344490 ctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 13344589  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  13344590 cttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12338061 - 12337937
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12338061 ctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 12337962  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  12337961 cttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 41493015 - 41492894
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttat 41492916  T
Q  106 aaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||    
T  41492915 aaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 30099306 - 30099181
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  30099306 ctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattct 30099207  T
Q  101 cttataaataggaccggagggagtat 126  Q
    || |||||||||||||||||||||||    
T  30099206 ctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4684056 - 4683951
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||    
T  4684056 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtaaaccgaaaattct 4683957  T
Q  101 cttata 106  Q
    ||||||    
T  4683956 cttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12170523 - 12170397
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  12170523 ctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttct 12170424  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||| || |||| | ||||||    
T  12170423 cttataaataagatcggatgaagtatt 12170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  23 aatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatagga 113  Q
    ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||| || |||  |||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  114 ccggaggga 122  Q
    | |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 13724221 - 13724102
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    |||||||||||||| || |||  |||||||||||||  |||||| ||| |  | |||||||| ||||||||||||||||||||||| | |  |||||| |    
T  13724221 gtcctatttataagcgatattctggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgt 13724122  T
Q  106 aaataggaccggagggagta 125  Q
    ||||||||||||||||||||    
T  13724121 aaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31150659 - 31150769
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||| |||||      ||||||||||||   ||||    
T  31150659 ctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca-----atttgttgacccatgtttct 31150753  T
Q  101 cttataaataggaccg 116  Q
    ||||||||||||||||    
T  31150754 cttataaataggaccg 31150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 41453090 - 41453149
Alignment:
Q  26 ttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 85  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 41478645 - 41478773
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41478645 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41478744  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||| ||||||||    
T  41478745 cttataaataggaccggaggtagtatttt 41478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15372350 - 15372224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15372350 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15372251  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||| ||||||||||||    
T  15372250 cttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37990019 - 37990145
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  37990019 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 37990118  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  37990119 cttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3055682 - 3055557
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3055682 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3055583  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  3055582 cttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15896966 - 15896841
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15896966 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15896867  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  15896866 cttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 44398810 - 44398685
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44398810 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44398711  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  44398710 cttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13197716 - 13197840
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13197716 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13197815  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  13197816 cttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 23227391 - 23227271
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||||| |  |||| |||   | ||||||||  ||||||||||| |||  | ||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttat 23227292  T
Q  106 aaataggaccggagggagtat 126  Q
    ||||| |||| ||||||||||    
T  23227291 aaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13724108 - 13724235
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| |||||| || |||||||||||||||  ||||||||||    ||  ||  || | |||||||||||||||||||||  ||  ||     
T  13724108 ctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcg 13724207  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||| | |||||||||||    
T  13724208 cttataaataggactgtagggagtattt 13724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 44397669 - 44397546
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||||    
T  44397669 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 44397570  T
Q  103 tataaataggaccggagggagtat 126  Q
    |||||||||||||||||| |||||    
T  44397569 tataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 4684006 - 4684063
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  4684006 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 16044391 - 16044452
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  16044391 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaattta 16044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 36688892 - 36688977
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    |||||||||||||||||||| || |||||||||| ||  |||||| | | ||||||||| ||| | ||||||||| ||||||||||    
T  36688892 ggtcctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41492902 - 41493015
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  41492902 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 41493001  T
Q  101 cttataaataggac 114  Q
     |||||||||||||    
T  41493002 tttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 37666684 - 37666740
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37666684 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 45294333 - 45294452
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||| | |||| ||||   ||||||||||| |||||||| ||||| | |||||||| |||||| | |||||||||||||| ||| || ||||    
T  45294333 cggtcctatttacaggagacatttcattcaacaaaagttaatgtatt-ggactaattttttaaccaaatactttaacttttgttgacctaaatttttctt 45294431  T
Q  104 ataaataggaccggagggagt 124  Q
    | |||||  |||| |||||||    
T  45294432 aaaaataaaaccgaagggagt 45294452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 23227346 - 23227404
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| | ||| ||||||    
T  23227346 aaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 23986788 - 23986898
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| |||||||||||||||||||  |||| |||||| ||||| | ||  |  |||||| |||||||||||| || |||||||||| ||||  | |||||    
T  23986788 ggtcatatttataagagaaatttaaatcaataaaagttaatgtttctgatccaaattttgaactaaatacataaagttttgttgactcaaatgtttctta 23986887  T
Q  105 taaataggacc 115  Q
    |||||| ||||    
T  23986888 taaataagacc 23986898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15271060 - 15271173
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| || ||||||||||||| ||||    ||||||||||  |||||| | | || |||||| ||||| |||| | |||||||||| |||||||  |||    
T  15271060 ctccgatcttatttataagagacatttgaagcaacaaaagttgatgtatctagtctaaattttgaactacatactttaacttttgttcacccaaacatct 15271159  T
Q  101 cttataaataggac 114  Q
    ||||||||||||||    
T  15271160 cttataaataggac 15271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 16243790 - 16243907
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || ||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttc 16243889  T
Q  102 ttataaataggaccggag 119  Q
    ||||||||||||||||||    
T  16243890 ttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30852741 - 30852648
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 94  Q
    |||||||||||||||||||||||| |||| | || ||||||  |||||| | |||||||| || ||  | |||||| ||||||||||| |||||    
T  30852741 ctccggtcctatttataagagaaagttagattaataaaagtttatgtatctagactgaatattgaatcagatacataaacttttgttgtcccaa 30852648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 38917528 - 38917653
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| || |    
T  38917528 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttat 38917627  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  38917628 cttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 4553125 - 4553069
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 66  Q
    ||||||||||||||| || ||||||||||| |  ||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaa 4553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6648525 - 6648649
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | || |||||||| ||| ||||    
T  6648525 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttct 6648624  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6648625 cttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9047761 - 9047801
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9047761 ctccggtcctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12337943 - 12337983
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  12337943 ctccggtcctatttataagagaattttgggtcaacaaaagt 12337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 31150709 - 31150653
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||| ||||| |||||    
T  31150709 aaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 39724284 - 39724344
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    |||| |||||||||||||||||||||   |||||||||  ||||||||| |||||||||||    
T  39724284 aaattcatcaacttttgttgacccaactgtctcttatatttaggaccggtgggagtatttt 39724344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13344608 - 13344481
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| | |||||||||||  |||||| | |    || ||    | ||||||||  | ||||||||||| ||| ||||    
T  13344608 ctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttct 13344509  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||| |||||||| |||||||    
T  13344508 cttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 40714016 - 40714075
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||| | || ||||||||||  |||||| |||| |||||||    
T  40714016 aaatacatcaacttttgttgacctacaagtctcttataagaaggaccagaggcagtattt 40714075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 13775832 - 13775862
Alignment:
Q  97 ttctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||||||    
T  13775832 ttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 36089457 - 36089559
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| |||||||||||||||||| || |||| ||     || ||| ||||| |||||||||||||| || || ||||  |||||| ||||    
T  36089457 ctatttataagagatatttaggtcaacaaaagttaacgtatctgattcaaaatttaaactagatacatcaacttttattaactcaaatatctcttctaaa 36089556  T
Q  109 tag 111  Q
    |||    
T  36089557 tag 36089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 7765821 - 7765788
Alignment:
Q  97 ttctcttataaataggaccggagggagtatttta 130  Q
    ||||||| ||||||||||||||||||||||||||    
T  7765821 ttctcttgtaaataggaccggagggagtatttta 7765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 20900678 - 20900794
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| |||| ||||| |||||||  |||||| | | |  |||||| ||| | |||| |||| ||||||||||| ||   |||||| ||||    
T  20900678 ctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacctaactatctcttgtaaa 20900777  T
Q  109 taggaccggagggagtat 126  Q
    ||||| ||||||||||||    
T  20900778 tagga-cggagggagtat 20900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 30852719 - 30852748
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  30852719 ttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 42263497 - 42263468
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  42263497 ttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 12170473 - 12170529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||||||| |||||| ||  ||||||| ||||||||| |||||||||||    
T  12170473 aaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16044323 - 16044363
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  16044323 ctccggtcctatttataagagaattttgggtcaactaaagt 16044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 20900718 - 20900678
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaatag 111  Q
    ||||||||||||||| |||||||||  ||||||||||||||    
T  20900718 atacatcaacttttgctgacccaaatgtctcttataaatag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30099188 - 30099228
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  30099188 ctccggtcctatttattagagaattttgggtcaacaaaagt 30099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggacc 115  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37666616 - 37666656
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  37666616 ctccggtcctatttataagagaattttgggtcaactaaagt 37666656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44804584 - 44804624
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  44804584 ctccggtcctatttataagagaattttaagttaacaaaagt 44804624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 49511 - 49635
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49511 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 49610  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  49611 cttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 49629 - 49499
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49629 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49530  T
Q  101 cttataaataggaccggagggagtattttac 131  Q
    |||||||||||||||||||| ||||||||||    
T  49529 cttataaataggaccggaggtagtattttac 49499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 8e-64; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10297985 - 10298112
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10297985 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 10298084  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  10298085 cttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40691120 - 40690986
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 40691021  T
Q  101 cttataaataggaccggagggagtattttacaaga 135  Q
    |||||||||||||||||||||||||||||| ||||    
T  40691020 cttataaataggaccggagggagtattttataaga 40690986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17653718 - 17653847
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17653718 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 17653817  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||| |||||||||    
T  17653818 cttataaataggaccggaggtagtatttta 17653847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 49823505 - 49823380
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49823505 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 49823406  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  49823405 cttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19557176 - 19557052
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19557176 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 19557077  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  19557076 cttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22721937 - 22722062
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22721937 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 22722036  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||| |||||||    
T  22722037 cttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37508927 - 37509052
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37508927 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37509026  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  37509027 cttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2787956 - 2787832
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 2787857  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  2787856 cttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34080154 - 34080030
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  34080154 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattct 34080055  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  34080054 cttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 48340403 - 48340527
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48340403 ctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 48340502  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  48340503 cttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 8817507 - 8817384
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8817507 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 8817408  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||| ||||||||    
T  8817407 ataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4238600 - 4238725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  4238600 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 4238699  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4238700 cttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8437431 - 8437556
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  8437431 ctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattct 8437530  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  8437531 cttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 44785520 - 44785391
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44785520 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44785421  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    ||||||||||| |||||||| |||| ||||    
T  44785420 cttataaatagaaccggaggaagtagttta 44785391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 46208036 - 46208161
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  46208036 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattct 46208135  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  46208136 cttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 51406679 - 51406804
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  51406679 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 51406778  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  51406779 cttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21295450 - 21295326
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  21295450 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaaaattct 21295351  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  21295350 cttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38964398 - 38964522
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38964398 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 38964497  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  38964498 cttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 9111615 - 9111497
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9111615 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 9111516  T
Q  104 ataaataggaccggaggga 122  Q
    |||||||||||||||||||    
T  9111515 ataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42507479 - 42507358
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  42507479 ctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattct 42507380  T
Q  101 cttataaataggaccggaggga 122  Q
    ||||||||||||||||||||||    
T  42507379 cttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36095804 - 36095676
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36095804 ctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 36095705  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    ||| |||||| |||||||| |||||||||    
T  36095704 cttgtaaataagaccggagtgagtatttt 36095676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6013460 - 6013336
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  6013460 ctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattct 6013361  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6013360 cttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42170470 - 42170346
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  42170470 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattct 42170371  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||||| || ||||||    
T  42170370 cttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 35513482 - 35513603
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||| ||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattctttt 35513581  T
Q  104 ataaataggaccggagggagta 125  Q
    |||||||||| |||||||||||    
T  35513582 ataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 33943055 - 33942931
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  33943055 tccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctc 33942956  T
Q  102 ttataaataggaccggagggagtat 126  Q
    |||||||||||| ||| | ||||||    
T  33942955 ttataaataggatcggcgagagtat 33942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 9213522 - 9213646
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| ||| ||||  ||||||||||||  |||||| |||||| | ||| |||| ||||||||||| ||||||||||| ||| ||||    
T  9213522 ctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttct 9213621  T
Q  101 cttataaataggaccggagggagta 125  Q
    || ||||||||||| ||||||||||    
T  9213622 ctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 5323214 - 5323337
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctc 101  Q
    ||||||||||||| || ||||| ||  ||||||||||   |||||||||| | ||||||||| ||| ||||||||||||||||||||||||||| ||  |    
T  5323214 ccggtcctatttacaaaagaaaattgagtcaacaaaaaataatgtatttgaattgaattttttaaccaaatacatcaacttttgttgacccaaattttac 5323313  T
Q  102 ttataaataggaccggagggagta 125  Q
    |||||||||| | |||||||||||    
T  5323314 ttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 34988084 - 34988205
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||| ||||| |||| |||||||||||||  || ||| ||| |    |||||||||| ||||||||||| |||||||| ||||  | ||||    
T  34988084 cggtcctatttattagagacatttgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgactcaaatatttctt 34988183  T
Q  104 ataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||    
T  34988184 ataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 9027196 - 9027139
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46208154 - 46208029
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46208154 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46208055  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  46208054 cttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9213640 - 9213512
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| ||||||||||| |||||||||||||||||||||| |  ||||||||||    ||  ||   | | ||||||||||||||||||||  |||  |||    
T  9213640 ctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtct 9213541  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
     ||||||||||||||||||||||||||||    
T  9213540 tttataaataggaccggagggagtatttt 9213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17653836 - 17653712
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  17653836 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 17653737  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  17653736 cttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37509045 - 37508921
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  37509045 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 37508946  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  37508945 cttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21295332 - 21295458
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa-ctaaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |  | | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  21295332 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatcta-attaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21295430  T
Q  100 tcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||| ||||||    
T  21295431 tcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 26019595 - 26019477
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||| || ||| |||||| || ||||||| | |||| |||||| ||| | |||||| |||||| ||||||| ||  ||||||||||||    
T  26019595 ctatttataagagaaagttgggttaacaaa-gttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaaattttctcttataaa 26019497  T
Q  109 taggaccggagggagtattt 128  Q
    ||||| |||| |||||||||    
T  26019496 taggatcggaaggagtattt 26019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4238718 - 4238592
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  4238718 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 4238619  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  4238618 cttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 34080036 - 34080162
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  34080036 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 34080135  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  34080136 cttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19557058 - 19557183
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  19557058 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 19557157  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  19557158 cttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 22722054 - 22721929
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  102 ttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||| ||||||    
T  22721954 ttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 43323072 - 43323145
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaac 80  Q
    |||||||||||||| ||| || |||||||||||||  ||||||||||| | |||||||||| ||||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaac 43323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49823387 - 49823512
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49823387 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49823486  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  49823487 cttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10298103 - 10297979
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  10298103 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 10298004  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  10298003 cttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 8817393 - 8817520
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  102 ttataaataggaccggagggagtatttt 129  Q
    ||||||||||||||| ||| ||||||||    
T  8817493 ttataaataggaccgaaggtagtatttt 8817520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 44785470 - 44785529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  44785470 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 2131748 - 2131802
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 8952009 - 8951943
Alignment:
Q  12 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 78  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| ||||||||||    
T  8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaatacatca 8951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 29285873 - 29285790
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 95  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||  || |||||| ||||| |||||| |||||||||||| |||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa--tatctgatctaaattttgaactacatacataaacttttgttgatccaaa 29285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38964516 - 38964390
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  38964516 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 38964417  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  38964416 cttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 42170356 - 42170478
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||||||||  ||||||||||||| ||| ||||||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctctta 42170455  T
Q  105 taaataggaccggagggagtatt 127  Q
    |||||| ||||||||| ||||||    
T  42170456 taaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42507361 - 42507487
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42507361 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 42507460  T
Q  101 cttataaataggaccggagggagtatt 127  Q
     ||||||||||||||||||| ||||||    
T  42507461 attataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 8092595 - 8092684
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||||||||||||||||||| ||   ||||| |||||  |||||| | |||| |||||||||| | |||||||||||| ||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgacc 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33128212 - 33128261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 50  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  33128212 ctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 36095754 - 36095811
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  36095754 aaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9111500 - 9111627
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  9111500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  100 tcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||| ||| |||||||    
T  9111599 tcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 30443762 - 30443858
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||| ||||||||||| ||  ||| | ||| ||||||||||||||| ||||||| |    |||||| |||| ||||||||||||||||    
T  30443762 ggtcaacaaaagttaatgtatttggtctatattatgaaccaaatacatcaactttagttgaccaatttgtctcttgtaaaaaggaccggagggagta 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 33128319 - 33128205
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||| ||||| ||||||||||||  || ||| ||| |  |||||| |||  ||||||| |||||||||||||| ||| ||||||||||| |    
T  33128319 tatttataagagacatttaagtcaacaaaagttgat-tatctggtcc-aattttaaaccgaatacattaacttttgttgacctaaatttctcttataatt 33128222  T
Q  110 aggaccggagggagtat 126  Q
    ||||| |||| ||||||    
T  33128221 aggactggagagagtat 33128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 35513529 - 35513473
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  35513529 aaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 48340521 - 48340397
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48340521 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48340422  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||| |||||||||||||||| ||||    
T  48340421 cttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 34988125 - 34988074
Alignment:
Q  75 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  34988125 atcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 2787906 - 2787956
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  2787906 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8437549 - 8437423
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| ||||    
T  8437549 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttct 8437450  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  8437449 cttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40691002 - 40691120
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||| ||| ||| ||||    
T  40691002 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttct 40691101  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  40691102 cttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6013342 - 6013463
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| ||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6013342 ctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6013441  T
Q  101 cttataaataggaccggaggga 122  Q
    ||||||||| |||| |||||||    
T  6013442 cttataaattggactggaggga 6013463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 45652128 - 45652067
Alignment:
Q  66 actaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||| ||||||| | |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 43323116 - 43323072
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaatagga 113  Q
    ||||||||||||||||||||||||||  || ||||||||||||||    
T  43323116 aaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 51406797 - 51406673
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  51406797 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 51406698  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||| ||||||||| ||||    
T  51406697 cttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 26001184 - 26001141
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgta 48  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  26001184 ggtcatatttataagagaaatttaagtcaacaaaagttaatgta 26001141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2131796 - 2131702
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 95  Q
    ||||||||||| |||| ||||| |||| |||||||||||||  |||||| ||| || ||||||  || |  ||||  ||||||||||||||||||    
T  2131796 ctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgacccaaa 2131702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 33943006 - 33943063
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||| |||||||||||||| ||  |||| |||||||||||| |||| |||||||    
T  33943006 aaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2787838 - 2787878
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  2787838 ctccggtcctatttataagagaattttgggtcagcaaaagt 2787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9027148 - 9027188
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  9027148 ctccggtcctatttataagataaagttgggtcaacaaaagt 9027188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 34381529 - 34381465
Alignment:
Q  63 ttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||| ||||||||| ||||||||||  |   || |||||||||||| |||||||||||||||    
T  34381529 ttaactagatacatcaatttttgttgacaaatttttttcttataaatagaaccggagggagtatt 34381465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 40215022 - 40215050
Alignment:
Q  98 tctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||||    
T  40215022 tctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44785402 - 44785442
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  44785402 ctccggttctatttataagagaattttgggtcaacaaaagt 44785442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7785902 - 7785776
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7785902 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 7785803  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7785802 cttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54736 - 54611
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54736 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 54637  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  54636 cttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2890286 - 2890161
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2890286 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 2890187  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  2890186 cttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32114599 - 32114466
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |    
T  32114599 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaatttt 32114500  T
Q  101 cttataaataggaccggagggagtattttacaag 134  Q
    ||||||||||||||||||||||||||||||||||    
T  32114499 cttataaataggaccggagggagtattttacaag 32114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6552661 - 6552785
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6552661 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6552760  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6552761 cttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39571327 - 39571200
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39571327 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 39571228  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  39571227 cttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7805823 - 7805697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  7805823 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 7805724  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7805723 cttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44498311 - 44498185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  44498311 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 44498212  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  44498211 cttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43199478 - 43199353
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  43199478 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 43199379  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  43199378 cttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 3304402 - 3304278
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  3304402 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 3304303  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  3304302 cttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12763778 - 12763650
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  12763778 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattat 12763679  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  12763678 cttataaataggaccggagggagtatttt 12763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32211487 - 32211360
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32211487 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 32211388  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  32211387 cttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 25601124 - 25600999
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25601124 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattct 25601025  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  25601024 cttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15888476 - 15888348
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15888476 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 15888377  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    ||||||||||| || ||||||||||||||    
T  15888376 cttataaatagaactggagggagtatttt 15888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31654619 - 31654743
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31654619 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31654718  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||||||||||||||||| ||||    
T  31654719 tttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 33289385 - 33289261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33289385 ctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 33289286  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  33289285 cttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12343264 - 12343146
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  12343264 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 12343165  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  12343164 cttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7012177 - 7012305
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7012177 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 7012276  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||| ||||||||    
T  7012277 cttataaataggaccggaggaagtatttt 7012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 13578871 - 13578988
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13578871 ctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 13578970  T
Q  109 taggaccggagggagtat 126  Q
    || ||| ||| |||||||    
T  13578971 tatgactggatggagtat 13578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8587176 - 8587301
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||| |||| |||||||||||| |||||||||||||| ||||| |||  ||||    
T  8587176 ctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttct 8587275  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| ||||||||| |||||    
T  8587276 cttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 28463617 - 28463742
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||| ||| | ||| ||||||||| | |||||||| |||||    
T  28463617 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattct 28463716  T
Q  101 cttataaataggaccggagggagtat 126  Q
       |||||||||| ||||||||||||    
T  28463717 gcaataaataggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27422199 - 27422322
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| ||  ||||||||   |  |||||||||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  27422199 ctccggtcctatttataagataaagttgagtcaacaa---ttcatgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttct 27422295  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||| ||||||||||    
T  27422296 cttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4245705 - 4245649
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245705 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 24692096 - 24691986
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || |||||||||| ||| | ||| ||||||||||||||||||||| |||| ||| |    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt-aaccagatatatcaacttttgttgacccaaatttcttttaaa 24691998  T
Q  107 aataggaccgga 118  Q
    ||||||||||||    
T  24691997 aataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17006917 - 17007026
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17006917 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17007016  T
Q  101 cttataaata 110  Q
    ||||||||||    
T  17007017 cttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17570330 - 17570221
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17570330 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17570231  T
Q  101 cttataaata 110  Q
    ||||||||||    
T  17570230 cttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33057600 - 33057725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| || | ||||||||| |   |||||  ||| |||| ||||||| | ||||||||| ||||||||||| ||  ||||    
T  33057600 ctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaaactttct 33057699  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| ||||||| |||||||    
T  33057700 cttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 8587226 - 8587170
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  8587226 aaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 28463667 - 28463616
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28463667 aaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 54618 - 54744
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  54618 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 54717  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  54718 cttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2890168 - 2890294
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  2890168 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 2890267  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  2890268 cttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7785784 - 7785910
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7785784 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7785883  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  7785884 cttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25601006 - 25601131
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  25601006 ctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 25601105  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| |||||| |||||    
T  25601106 cttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 43199360 - 43199485
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43199360 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 43199459  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  43199460 cttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 4245655 - 4245715
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  4245655 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 4245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6552779 - 6552655
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6552779 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6552680  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6552679 cttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 13246889 - 13246801
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||||  |||||| |||||||||||||||   ||||||||  | ||||||||| ||||| ||||||||||||||||| ||||    
T  13246889 gtcaacaaaagttcatgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31654737 - 31654613
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31654737 ctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31654638  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  31654637 cttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 7805773 - 7805831
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7805773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27422311 - 27422266
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  27422311 cggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 3304352 - 3304408
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3304352 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 15888426 - 15888482
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15888426 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 17006962 - 17006914
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 17570285 - 17570333
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  72 tacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 32114549 - 32114605
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32114549 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39571209 - 39571333
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  39571209 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 39571308  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  39571309 cttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 44498261 - 44498317
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44498261 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 13246801 - 13246851
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 52  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 15688084 - 15688038
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 117  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 24203091 - 24202989
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||   | |||||| ||| ||||||||||||  || |||||| |||  | |||||||    
T  24203091 tcctatttataagagaaatttatgtcaataaaagtggatatatttgatttaaattttgaaccaaatacatcaaccattattgaccaaaatatttcttata 24202992  T
Q  107 aat 109  Q
    |||    
T  24202991 aat 24202989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33289267 - 33289393
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||| |||||| | ||| ||||    
T  33289267 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttct 33289366  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  33289367 cttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 12763728 - 12763785
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  12763728 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 24692054 - 24692111
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||| ||  || |||||||||||||| || |||||||||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtattt 24692111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 32211449 - 32211494
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 28999163 - 28999083
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    ||||||||| ||||| || ||||||||||| |  |||||| | ||||||||||||||||| |||| | ||||||| |||||    
T  28999163 tatttataaaagaaagtttggtcaacaaaaattgatgtatctagactgaatttttaactacatacgtaaacttttattgac 28999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 33057648 - 33057592
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||| ||| ||||||||| ||||  || ||||||||||||||||||||||||||||    
T  33057648 atacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 7012217 - 7012171
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012217 acttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32211369 - 32211407
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  32211369 ctccggtcctatttataagagaattttgggtcaacaaaa 32211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3304284 - 3304324
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  3304284 ctccggtcctatttataagaaaattttgggtcaacaaaagt 3304324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7012295 - 7012255
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  7012295 ctccggtcctatttataagagaattttggatcaacaaaagt 7012255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7805705 - 7805745
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  7805705 ctccggtcctatttataagagaattttgggtcagcaaaagt 7805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12763660 - 12763700
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  12763660 ctccggtcctatttataagataattttgggtcaacaaaagt 12763700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 41915620 - 41915592
Alignment:
Q  98 tctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||||    
T  41915620 tctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 43332592 - 43332556
Alignment:
Q  92 caaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  43332592 caaaattttcttataaataggaccggatggagtattt 43332556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44498193 - 44498233
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  44498193 ctccggtcctatttataagagaattttgggtcaataaaagt 44498233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1738571 - 1738445
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1738571 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 1738472  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  1738471 cttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7240755 - 7240881
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7240755 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 7240854  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7240855 cttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 46840866 - 46840990
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46840866 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 46840965  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  46840966 cttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7482231 - 7482357
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7482231 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattct 7482330  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7482331 cttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38064037 - 38063911
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38064037 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 38063938  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||||| |||||||||||    
T  38063937 cttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 9268766 - 9268887
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9268766 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctta 9268865  T
Q  105 taaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||    
T  9268866 taaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22285705 - 22285829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22285705 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 22285804  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  22285805 cttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23314263 - 23314139
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23314263 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattct 23314164  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  23314163 cttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31319523 - 31319399
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31319523 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31319424  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||||||||    
T  31319423 cttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36583401 - 36583527
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36583401 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattct 36583500  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||    
T  36583501 cttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1565853 - 1565728
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1565853 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 1565754  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||| |||| |||||||||    
T  1565753 cttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 94442 - 94318
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattct 94343  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||| |||||||||||    
T  94342 cttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28536875 - 28536750
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||    
T  28536875 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaaaattct 28536776  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  28536775 cttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36016320 - 36016196
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36016320 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 36016221  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||||| || ||||||    
T  36016220 cttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38441466 - 38441590
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  38441466 ctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattct 38441565  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  38441566 cttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4790254 - 4790379
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  4790254 ctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaaaattct 4790353  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4790354 cttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  11 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  111 ggaccggag 119  Q
    |||||||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40840243 - 40840126
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| |||||||| ||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||    
T  40840243 ctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttct 40840144  T
Q  101 cttataaataggaccgga 118  Q
    ||||||||||||||||||    
T  40840143 cttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 9575419 - 9575539
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||||||||| ||||||||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||| ||||||||||| ||  ||||||||    
T  9575419 ggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctctta 9575518  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||| ||||||||    
T  9575519 taaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7269529 - 7269412
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||| ||| || ||||||||||| |  |||||| |  |||||||||||||| | || |||||||||||||| ||||||  ||||    
T  7269529 ctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttct 7269430  T
Q  101 cttataaataggaccgga 118  Q
    ||||||||||||||||||    
T  7269429 cttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 7661088 - 7661207
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||||||| ||||| ||||||  |||||  |||    ||  ||  |||| |||||||||||||||||||||||||  |||| ||||    
T  7661088 tcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgacccaaatgtctcatata 7661187  T
Q  107 aataggaccggagggagtat 126  Q
    ||||||||| ||||||||||    
T  7661188 aataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 46840984 - 46840857
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46840984 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46840885  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||| |||||||    
T  46840884 cttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 1738453 - 1738579
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  1738453 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 1738552  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  1738553 cttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7240873 - 7240747
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7240873 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7240774  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  7240773 cttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22285823 - 22285697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  22285823 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 22285724  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  22285723 cttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 36016270 - 36016326
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36016270 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 1565803 - 1565862
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1565803 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 94324 - 94442
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  94324 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 94423  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  94424 cttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7482349 - 7482224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  7482349 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacctaaatttc 7482251  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||| |||||    
T  7482250 tcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9268880 - 9268754
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9268880 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9268781  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||||| |||| ||||||    
T  9268780 cttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 7661196 - 7661075
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||| |||| |||| |||||||||||||  |||||| | | |  | ||||| || |  ||||||||||||| |||||  ||| ||||||||    
T  7661196 ggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttctctta 7661097  T
Q  105 taaataggaccggagggagtat 126  Q
    ||||||||| || |||||||||    
T  7661096 taaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 9575467 - 9575406
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    |||||||| | |||||||||||||||||  |||||||| |||||||||| ||||||||||||    
T  9575467 ctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 28536825 - 28536882
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  28536825 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 38063987 - 38064044
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38063987 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 23314213 - 23314269
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314213 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 31319473 - 31319529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31319473 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36583519 - 36583395
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36583519 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttct 36583420  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  36583419 cttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 7269481 - 7269535
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||||||||||||||    
T  7269481 atacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 24710743 - 24710801
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||    ||| ||||||| ||||||||||||||||||    
T  24710743 aaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagtatt 24710801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4790372 - 4790247
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || |||   | ||||||||  | ||||||||||| ||| || |    
T  4790372 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaattttt 4790273  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4790272 cttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 38441584 - 38441460
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||  ||| |||    
T  38441584 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacataaatttc 38441486  T
Q  100 tcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||| ||||    
T  38441485 tcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 46877666 - 46877719
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    |||||| |||||||||||||||||  |||||||||| ||||||||||| |||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23314145 - 23314185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  23314145 ctccggtcctatttataagagaattttgggtcaacaaaagt 23314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 29993291 - 29993251
Alignment:
Q  78 aacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  29993291 aacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33418500 - 33418460
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagt 33418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 40840126 - 40840165
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagt 40840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 46877713 - 46877666
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||| ||||||||||| || ||||||||||||| |||||||    
T  46877713 tccggtcctatatataagagaaagttgggtcaacaaaagttaatgtat 46877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 28677341 - 28677311
Alignment:
Q  100 tcttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||||||||||||||    
T  28677341 tcttataaataggaccggagggagtatttta 28677311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 5347750 - 5347721
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  5347750 ttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31319405 - 31319445
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  31319405 ctccggttctatttataagagaattttgggtcaacaaaagt 31319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36016206 - 36016242
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagt 36016242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 38063923 - 38063959
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  38063923 ggtcctatttataagagaattttgggtcaacaaaagt 38063959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26602329 - 26602455
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26602329 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 26602428  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  26602429 cttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6330121 - 6330246
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6330121 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6330220  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  6330221 cttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11572269 - 11572144
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11572269 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11572170  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  11572169 cttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2830341 - 2830465
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2830341 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 2830440  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  2830441 cttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 8099536 - 8099664
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  8099536 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 8099635  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  8099636 cttataaataggaccggagggagtatttt 8099664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8383093 - 8382969
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8383093 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 8382994  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  8382993 cttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 13853714 - 13853592
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13853714 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 13853615  T
Q  104 ataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||    
T  13853614 ataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9644702 - 9644829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9644702 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9644801  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  9644802 cttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9650719 - 9650846
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9650719 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9650818  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  9650819 cttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33052918 - 33052791
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33052918 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 33052819  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||| |||||||||    
T  33052818 cttataaataggaccggatggagtattt 33052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 35031125 - 35031000
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  35031125 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 35031026  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  35031025 cttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6068572 - 6068697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||    
T  6068572 ctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattct 6068671  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  6068672 cttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 8417913 - 8417793
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8417913 ggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctctta 8417814  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||| ||||||||    
T  8417813 taaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6143560 - 6143684
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  6143560 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattct 6143659  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||| ||||||    
T  6143660 cttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 28747248 - 28747133
Alignment:
Q  11 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  111 ggaccggagggagtat 126  Q
    |||| | |||||||||    
T  28747148 ggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 17992018 - 17992118
Alignment:
Q  25 tttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagt 17992117  T
Q  125 a 125  Q
    |    
T  17992118 a 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22896477 - 22896593
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  22896477 ctccggtcctatttataagagaagtttaggtcaaca---------gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattct 22896567  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  22896568 cttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13043764 - 13043850
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 87  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||||||||    
T  13043764 ctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 3788048 - 3788168
Alignment:
Q  7 tcctatttataagagaaatttaggtcaa-caaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    |||||||||||||||||| || |||||| ||||| |   || || ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||    
T  3788048 tcctatttataagagaaagttgggtcaatcaaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttat 3788147  T
Q  106 aaataggaccggagggagtat 126  Q
    ||||| |||||||||||||||    
T  3788148 aaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 7597092 - 7596972
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||| ||  || |||||||||  ||||||  | ||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  7597092 tatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaat 7596993  T
Q  110 aggaccggagggagtatttta 130  Q
    ||||  |||||||||| ||||    
T  7596992 aggattggagggagtacttta 7596972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 6069062 - 6068974
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||| || |||||||||||  |||| ||| ||||||||||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacc 6068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 14936577 - 14936456
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||||||||||||||||| |||| ||||||||| |||  |||||||||||   |||| ||||||| |||||||| |||||||||||| |||  | ||||     
T  14936577 ggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttcttc 14936478  T
Q  105 taaataggaccggagggagtat 126  Q
    || |||||||| ||||||||||    
T  14936477 tatataggaccagagggagtat 14936456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 8099654 - 8099529
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| ||||    
T  8099654 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttct 8099555  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  8099554 cttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8382975 - 8383101
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  8382975 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 8383074  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  8383075 cttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2830459 - 2830334
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  2830459 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 2830360  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  2830359 cttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11572151 - 11572276
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11572151 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11572250  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  11572251 cttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6330239 - 6330115
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6330239 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6330140  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6330139 cttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    |||||||||||||||||||||||||||| ||||||||| ||   || |||  |||| ||||||||||||||||| ||| |||  |||||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtattt-gatgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26602447 - 26602323
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  26602447 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 26602348  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  26602347 cttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 8417802 - 8417925
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||||||    
T  8417802 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctctt 8417901  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||| |||| |||||||||||    
T  8417902 ataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 8186443 - 8186497
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13853599 - 13853725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13853599 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13853698  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||| ||| ||||||    
T  13853699 cttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 14936531 - 14936589
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| |||||| ||||    
T  14936531 aaatacatcaactattgttgacccaaatatctcttataaataggaccagagggattatt 14936589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 33052868 - 33052926
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  33052868 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3788161 - 3788111
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 51  Q
    |||||||| ||||||||||| ||||||||||||||||||||  ||||||||    
T  3788161 ctccggtcttatttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6068690 - 6068564
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||  | | ||||||||  |||||| |||||| ||| || |    
T  6068690 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaattttt 6068591  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  6068590 cttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 8186489 - 8186366
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    |||||||||||||||| |||||||| | |||||||||||  |||||| ||  |  ||||   ||  |||||||||||||||| ||||||||||  |||||    
T  8186489 ccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatctgatccaaattg--aatcaaatacatcaacttttattgacccaaatgtctct 8186392  T
Q  103 tataaataggaccggagggagtattt 128  Q
    | || |||||| |||||| |||||||    
T  8186391 tgtatataggagcggaggaagtattt 8186366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 31849636 - 31849586
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  31849636 aaatacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 6143610 - 6143553
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  6143610 aaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 35031075 - 35031132
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| || ||||||||||||||||||||| |||||    
T  35031075 aaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9644820 - 9644780
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9644820 ctccggtcctatttataagagaattttgggtcaacaaaagt 9644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9650837 - 9650797
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9650837 ctccggtcctatttataagagaattttgggtcaacaaaagt 9650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 5685368 - 5685470
Alignment:
Q  24 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 123  Q
    |||| |||||||||||||  ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||    
T  5685368 atttgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggag 5685467  T
Q  124 tat 126  Q
    |||    
T  5685468 tat 5685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35031007 - 35031045
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  35031007 ctccggtcctatttataagagaattttgggtcaacaaaa 35031045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 3421693 - 3421588
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||| ||||||| |||| ||  ||||||||||||  || ||| | || ||| |||||||  | ||| |||||||||||||||| |||| || |||||    
T  3421693 ggtcctacttataagtgaaagttgagtcaacaaaagttgatatatctagattgattttttaataagatatatcaacttttgttgactcaaatttttctta 3421594  T
Q  105 taaata 110  Q
    ||||||    
T  3421593 taaata 3421588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 9644737 - 9644696
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  9644737 tgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 9650754 - 9650713
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  9650754 tgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 12473651 - 12473684
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||||||||| ||||    
T  12473651 gtcctatttataagagaaatttaggtcaataaaa 12473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 6069014 - 6069062
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgg 117  Q
    |||||||| |||||||||||||| |||  ||| ||||||||||||||||    
T  6069014 aaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 13043802 - 13043758
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||| ||||| |||||||||||||| ||||| |||| ||||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 33859611 - 33859643
Alignment:
Q  97 ttctcttataaataggaccggagggagtatttt 129  Q
    ||||||| |||||||||||||||||||||||||    
T  33859611 ttctcttgtaaataggaccggagggagtatttt 33859643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9395356 - 9395482
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9395356 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9395455  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  9395456 cttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41989531 - 41989403
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41989531 ctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 41989432  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  41989431 cttataaataggaccggagggagtatttt 41989403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13103030 - 13103156
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13103030 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13103129  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  13103130 cttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36563662 - 36563537
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36563662 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 36563563  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  36563562 cttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37149079 - 37148955
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37149079 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37148980  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||||||||||||||||||||||    
T  37148979 attataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13033057 - 13033183
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13033057 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13033156  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||    
T  13033157 cttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11795174 - 11795299
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11795174 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11795273  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||| |||||||||||    
T  11795274 cttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 23359952 - 23360072
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23359952 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctta 23360051  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||||||| ||||    
T  23360052 taaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17025630 - 17025755
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  17025630 ctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaattct 17025729  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  17025730 cttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20848080 - 20848203
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  20848080 ctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaattct 20848178  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  20848179 cttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26350474 - 26350348
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||    
T  26350474 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattct 26350375  T
Q  101 cttataaataggaccggagggagtatt 127  Q
     ||||||||||||||||||||||||||    
T  26350374 tttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37641959 - 37642085
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattc 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  37641959 ctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattc 37642058  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||    
T  37642059 tcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 582995 - 583118
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  582995 ctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 583094  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||  |||||| |||||||||||    
T  583095 tttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21575970 - 21576077
Alignment:
Q  19 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccgga 21576069  T
Q  119 gggagtat 126  Q
    ||||||||    
T  21576070 gggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 4443969 - 4444087
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctctt 4444068  T
Q  104 ataaataggaccggaggga 122  Q
    ||||||| |||||||||||    
T  4444069 ataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  16 taagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggacc 115  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  116 ggagggagta 125  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38361815 - 38361750
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 66  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38361815 ctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaa 38361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 3549663 - 3549553
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| ||||  |||||||||| | ||||||| ||| || ||||||||||  |||||||||||||||||| |   ||| ||||||||||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttataaa 3549564  T
Q  109 taggaccggag 119  Q
    |||||||||||    
T  3549563 taggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 2366444 - 2366352
Alignment:
Q  19 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatag 111  Q
    |||||| || ||| || ||||||  |||||||||||||||| ||||||| |||||||| |||| ||||||||||||| |||||||||||||||    
T  2366444 gagaaagtttggttaataaaagttgatgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 13539986 - 13539909
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttt 83  Q
    |||||||||||||||||||||||||||||||||||||    |||  |||| ||||||||||||||||| |||||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 966157 - 966280
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||| |||||||| ||   ||||||| |||  |||||| | ||||||||||||||| | ||||||  | ||||||||| ||||| |||||||    
T  966157 cggtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctctt 966256  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||| |||||| |||||    
T  966257 ataaataggactggagggggtatt 966280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 17025748 - 17025619
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||     |||||||||  |||||||| |||| ||| ||||    
T  17025748 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttct 17025649  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||| |||||||||    
T  17025648 cttataaataggaccggaggtagtatttta 17025619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9395474 - 9395350
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9395474 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9395375  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  9395374 cttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 35904448 - 35904529
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||  |||||| ||||||| ||||| || |||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagtatt 35904529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2629668 - 2629561
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| | ||||||||| | |||||||||||||||||| ||||||| ||  || | |||||||||| ||||||||| |||| ||||| ||||  | |    
T  2629668 ctccggtcttgtttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgttt 2629569  T
Q  101 cttataaa 108  Q
    ||||||||    
T  2629568 cttataaa 2629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 4444018 - 4443955
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||  ||||||||||||| ||| |||||||||||||||||||| ||| |||||||||    
T  4444018 ctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtatttta 4443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36563544 - 36563671
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36563544 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 36563643  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||| |||||| |||||||    
T  36563644 cttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39290781 - 39290891
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||| |||||||||  | |||||||||||| |  ||||||||||| | ||||||||| || |||||| ||||||||||||  | |  ||||    
T  39290781 ctccggtcctatt-ataagagaatatcaggtcaacaaaaattgatgtatttggattaaatttttaattagatacattaacttttgttgattcgactttct 39290879  T
Q  101 cttataaatagg 112  Q
    ||||||||||||    
T  39290880 cttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 37149029 - 37149087
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37149029 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 13033107 - 13033050
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13033107 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13103148 - 13103023
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13103148 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13103049  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  13103048 cttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 23360066 - 23359941
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  23360066 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 23359967  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||| |||| |||||    
T  23359966 cttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 36595886 - 36595782
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||  || | |||||||||   ||||||| | ||||||||||||||  | ||||||||| ||||||||||| ||  |||||||||||||    
T  36595886 tatttataagagaatatttgatcaacaaaa---aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaat 36595790  T
Q  110 aggaccgg 117  Q
    | ||||||    
T  36595789 aagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41989413 - 41989538
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41989413 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41989512  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||| ||||||||||||||| |||||    
T  41989513 cttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 26350424 - 26350480
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  26350424 aaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 40138906 - 40138806
Alignment:
Q  10 tatttataagagaaatttag-gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||  | | |||||||||| | ||| |||||| |||||||||||||  |||||||||||||||| || ||||||  |||| |||||||    
T  40138906 tatttataagagaaaagttgagtcaacaaaaataaatatatttgaactgaatttttaatcaaatacatcaacttttattaacccaattttcttttataaa 40138807  T
Q  109 t 109  Q
    |    
T  40138806 t 40138806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 583045 - 582987
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||| ||||||    
T  583045 aaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11574204 - 11574166
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11574204 ctccggtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 20848130 - 20848072
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  20848130 aaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18167334 - 18167435
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||| |||||||||| |||| ||||||||| |  |||||| |||| | |||||||||  |||||| |||| ||||||||||| ||  || ||||||||||    
T  18167334 tattaataagagaaagttagatcaacaaaaattgatgtatatggatttaatttttaatcaaatacgtcaatttttgttgaccaaactttttcttataaat 18167433  T
Q  110 ag 111  Q
    ||    
T  18167434 ag 18167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 39030648 - 39030587
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  39030648 gtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 39030587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 966272 - 966224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||| |||||||||||||||||||||| | ||||||||| |||||||||    
T  966272 ctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6126948 - 6126908
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  6126948 ctccggtcctatttataagagaattttgggtcaacaaaagt 6126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11795292 - 11795168
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11795292 ctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11795193  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||| |||||| ||||    
T  11795192 cttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 39290830 - 39290775
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||||||  | |||||||||| |||||||||||||||||||    
T  39290830 aaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 27081063 - 27080981
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaactttt 84  Q
    |||| ||||||||| |||||| ||||||||||||||||||  ||||||||   || |||||||||  ||||| |||| |||||    
T  27081063 tccgatcctatttacaagagacatttaggtcaacaaaagttgatgtatttaatctaaatttttaatcaaataaatcatctttt 27080981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 27081013 - 27081063
Alignment:
Q  68 taaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||| ||||    
T  27081013 taaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 37641997 - 37641951
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 38361743 - 38361713
Alignment:
Q  95 aattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||||||||    
T  38361743 aattctcttataaataggaccggagggagta 38361713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 1643466 - 1643495
Alignment:
Q  98 tctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||||||||    
T  1643466 tctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3549553 - 3549602
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 50  Q
    ||||||||||||||||||||||||||||  | |||||||||  |||||||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtatt 3549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 11574161 - 11574210
Alignment:
Q  76 tcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| |||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 13539949 - 13539986
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  13539949 ttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 35584450 - 35584507
Alignment:
Q  72 tacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    ||||||||||||||||||| |||  ||||||||||||||| |  ||||| ||||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaatagaattggaggaagtatttt 35584507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 2366352 - 2366396
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 53  Q
    ||||||||||||||||||| ||||||||| |||  ||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttgg 2366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4444084 - 4444036
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||| |||||||||||||| ||||| |||||||||||  ||||||    
T  4444084 ctccggtcttatttataagagaattttagatcaacaaaagttgatgtat 4444036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13033175 - 13033127
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  ||||||    
T  13033175 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtat 13033127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21576070 - 21576030
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  21576070 ctccggtcctatttataagagaattttggatcaacaaaagt 21576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 26395150 - 26395082
Alignment:
Q  60 tttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||| |||||||||||||| |||||||||| ||||  ||  |||||||||||| |||||  |||||||    
T  26395150 tttttgactaaatacatcaatttttgttgactcaaatgtcctttataaataggatcggagaaagtattt 26395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 36595782 - 36595818
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaa 36595818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37148961 - 37149001
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  37148961 ctccggtcctatttataatagaattttgggtcaacaaaagt 37149001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37642078 - 37642038
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  37642078 ctccggtcctatttataagagaattttgggtcaataaaagt 37642038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14984843 - 14984969
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 14984942  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  14984943 cttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 27159482 - 27159358
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27159482 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 27159383  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  27159382 cttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31842919 - 31842795
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31842919 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31842820  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  31842819 cttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 39402090 - 39401966
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39402090 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 39401991  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  39401990 cttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 44668217 - 44668093
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44668217 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44668118  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  44668117 cttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9981653 - 9981779
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9981653 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9981752  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||| ||||    
T  9981753 cttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12483752 - 12483626
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12483752 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattct 12483653  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  12483652 cttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 47216823 - 47216698
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47216823 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 47216724  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||| ||||||||||||||    
T  47216723 cttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1050894 - 1051022
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  1050894 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaaaattct 1050993  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  1050994 cttataaataggaccggagggagtatttt 1051022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11795939 - 11796063
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11795939 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11796038  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  11796039 cttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26471189 - 26471065
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  26471189 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 26471090  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  26471089 cttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34042702 - 34042829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34042702 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 34042801  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||| ||||||||||||||||    
T  34042802 cttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 47777603 - 47777481
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  47777603 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctct 47777504  T
Q  103 tataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||    
T  47777503 tataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44955330 - 44955212
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  44955330 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattct 44955231  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  44955230 cttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 25694331 - 25694450
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 25694430  T
Q  107 aataggaccggagggagtat 126  Q
    ||||||||||||||||||||    
T  25694431 aataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 31159242 - 31159108
Alignment:
Q  124 tattttacaagaagtag----ttgttattttgttctttcatttattccaaaataaaatgatgacatagttgaattgaatcatcatcatacagacatttga 219  Q
    ||||||||||| |||||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  31159242 tattttacaaggagtagttgtttgttattctgttctttcatttattccaaaataaaatgatgacatagttgaattga---atcatcatacagacatttga 31159146  T
Q  220 ttgtagcaatcatgtggggccaagaaactagtagttct 257  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31159145 ttgtagcaatcatgtggggccaagaaactagtagttct 31159108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 47588457 - 47588335
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  47588457 ggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctctta 47588358  T
Q  105 taaataggaccggagggagtatt 127  Q
    ||||||  |||| ||||||||||    
T  47588357 taaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23278125 - 23278021
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23278125 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 23278026  T
Q  101 cttat 105  Q
    |||||    
T  23278025 cttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47969700 - 47969827
Alignment:
Q  1 ctccggtcctatttataa-gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattc 99  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||     
T  47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaatta 47969799  T
Q  100 tcttataaataggaccggagggagtatt 127  Q
    | ||||||||||||||||||||||||||    
T  47969800 ttttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 17556762 - 17556884
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaa-tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  17556762 ggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctctt 17556861  T
Q  104 ataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||    
T  17556862 ataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11897060 - 11897187
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||   ||||||||||||||||||||||||| ||||    
T  11897060 ctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttct 11897159  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  11897160 cttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16448232 - 16448108
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| ||||||||||||| ||| | |||||| ||||||||||||||||| ||||     
T  16448232 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcc 16448133  T
Q  101 cttataaataggaccggagggagta 125  Q
    | |||||||| |||||||| |||||    
T  16448132 cctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 11989796 - 11989911
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||| || |||||||||||   ||| ||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||| ||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  110 aggaccggagggagta 125  Q
    ||||||||||||||||    
T  11989896 aggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37552147 - 37552272
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| ||  |||||||| |||  |||||| ||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  37552147 ctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttct 37552246  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  37552247 cttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12213598 - 12213484
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| ||| ||||||||||||||  |||||||||||||| | ||||||||| || |||||||||||||||||| ||||| ||||||||||||||  ||||    
T  12213598 ctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttct 12213499  T
Q  101 cttataaataggacc 115  Q
    || ||||||||||||    
T  12213498 ctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12483634 - 12483760
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    ||||||||||  ||||||||||||| ||| ||||    
T  12483634 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttct 12483733  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  12483734 cttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 16448184 - 16448239
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11897178 - 11897053
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa-atacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||  ||  | ||  || |  | | ||||||||||||||||||||| ||  |||    
T  11897178 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggt-taaaaattcagttcagatacatcaacttttgttgacctaactttc 11897080  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||    
T  11897079 tcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27159364 - 27159490
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  27159364 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 27159463  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  27159464 cttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 37552263 - 37552141
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| |||    || ||    | | |||||| |||| |||||||| |||  || |||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatct 37552164  T
Q  103 tataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||    
T  37552163 tataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 44668099 - 44668225
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44668099 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44668198  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  44668199 cttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9981771 - 9981646
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9981771 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9981672  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  9981671 cttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 1598461 - 1598379
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||| |||| || ||||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcggatggggtattt 1598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31842801 - 31842925
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31842801 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31842900  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  31842901 cttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39401972 - 39402096
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  39401972 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 39402071  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  39402072 cttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11796057 - 11795930
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | |||| |||  ||||||||||||| ||| ||||    
T  11796057 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttct 11795958  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||| |||||||    
T  11795957 cttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 12043616 - 12043726
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||| ||| ||||| ||||||||||||  |||||||| || | |||||||||| | |||||| || |||||||||   ||| || |||||||    
T  12043616 tcctatttataaaagatatttaagtcaacaaaagttgatgtattt-gattcaatttttaacaagatacattaatttttgttgatttaaatttttcttata 12043714  T
Q  107 aataggaccgga 118  Q
    ||||||||||||    
T  12043715 aataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 14984961 - 14984834
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  14984961 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 14984862  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||  |||||||    
T  14984861 cttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 26471139 - 26471197
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  26471139 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 47216773 - 47216829
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47216773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47777487 - 47777603
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47777487 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 47777586  T
Q  101 cttataaataggaccgg 117  Q
    |||||||||||||||||    
T  47777587 cttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 1050934 - 1050883
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagtaattta 1050883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 5392211 - 5392278
Alignment:
Q  60 tttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||| |||||||||||||||| |||||| ||| |||||||||| || |||||| || |||||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 12047117 - 12047223
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||||||| ||  || ||||||| |||| ||||||| |||||||||||| ||||  |||||||||  ||| |||| ||||| |||||||    
T  12047117 gtcctatttataagagaaagttgagttaacaaaaagtga-tgtatttagactgaattttttaactggatacatcaatctttattgatccaaatttctctt 12047215  T
Q  104 ataaatag 111  Q
    ||||||||    
T  12047216 ataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 12213546 - 12213605
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||| || ||||||||||| || ||||||||||||||| ||| |||||||||||    
T  12213546 ctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 17556877 - 17556751
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc-aacttttgttgacccaaaattc 99  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||| ||  |||    
T  17556877 ctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttc 17556778  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||| ||||||||||    
T  17556777 tcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25694443 - 25694317
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  |||||| |||| | ||| ||||    
T  25694443 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttct 25694344  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| | |||||||||||    
T  25694343 cttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 571542 - 571622
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||| | ||||||| ||||||||||| |||||  ||||| |||||||||||| | || |||||| ||||||||    
T  571542 ggtcaacaaaagtta-tgtatttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaata 571622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34042820 - 34042695
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | ||||||||||| ||| ||||    
T  34042820 ctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttct 34042721  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  34042720 cttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 12062568 - 12062679
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    |||||||||||||||| ||| |||| | |||||||||||  |||||| | || | |||||||||  | |||||| || |||||||||   ||| ||||||    
T  12062568 ccggtcctatttataaaagatattttgatcaacaaaagttgatgtatct-gattcaatttttaatcagatacattaatttttgttgatttaaatttctct 12062666  T
Q  103 tataaataggacc 115  Q
    |||||||||||||    
T  12062667 tataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 12062679 - 12062568
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||| | || | ||  || ||  | ||||||||||||||||||| | |||  ||| |||    
T  12062679 ggtcctatttataagagaaatttaaatcaacaaaaattaatgtatct-gattaaaaattgaatcagatacatcaacttttgttgatcaaaatatctttta 12062581  T
Q  105 taaataggaccgg 117  Q
    |||||||||||||    
T  12062580 taaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 21537945 - 21538001
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| |||  |||||||||||||| || ||||| |||||||    
T  21537945 atacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 23278087 - 23278131
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 47969753 - 47969694
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctc-ttataaataggaccggagggagta 125  Q
    ||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||| |||||    
T  47969753 ctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 3739838 - 3739900
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||| ||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  3739838 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 3739900  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 19391910 - 19392004
Alignment:
Q  31 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| ||||| |||  ||||||| |  |||||||| |||||||||| || |||  |||||||||| ||||||| ||||| ||||    
T  19391910 tcaacaaaagttaatatatttcgaccaaatttttgagaaaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29855142 - 29855084
Alignment:
Q  31 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 89  Q
    ||||||||||| ||||||||| |    |||||||||| |||||||||||||||||||||    
T  29855142 tcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttga 29855084  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 47588411 - 47588469
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| |||| |||| ||||||    
T  47588411 aaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 5392198 - 5392145
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||| |||||||||| ||||  |||||||||||||||| ||||| |||||||    
T  5392198 catcaatttttgttgacacaaatgtctcttataaataggatcggagtgagtatt 5392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 5392267 - 5392218
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 53  Q
    |||||| || ||||||||||||||||||||| ||||||  ||||||||||    
T  5392267 cggtccaatatataagagaaatttaggtcaataaaagttgatgtatttgg 5392218  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11774536 - 11774605
Alignment:
Q  18 agagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 87  Q
    ||||||| |||||||||||||| |  ||||| ||  |||||||||| ||||| |||| ||||||||||||    
T  11774536 agagaaagttaggtcaacaaaaattgatgtaattaaactgaattttgaactagatacgtcaacttttgtt 11774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 19610840 - 19610775
Alignment:
Q  65 aactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||||||| |||||||||||||    | ||||||||| |||||  ||||||||||||||    
T  19610840 aactaaatacatcaatttttgttgacccatttgtatcttataaaaaggacaagagggagtatttta 19610775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1051012 - 1050964
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||||||||||||||| ||| ||||||| |||||  ||||||    
T  1051012 ctccggtcctatttataagagaattttgggtcaactaaagttgatgtat 1050964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 12069499 - 12069607
Alignment:
Q  8 cctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataa 107  Q
    ||||||||| ||||||| ||  || ||||||| |  |||||||| |||||||||||||||   ||| |||||||||| |  || |||  |||||||||||    
T  12069499 cctatttatgagagaaagttgagttaacaaaaatttatgtatttagactgaatttttaacctgataaatcaacttttatcaactcaattttctcttataa 12069598  T
Q  108 ataggaccg 116  Q
    ||| |||||    
T  12069599 ataagaccg 12069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21537993 - 21537869
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| || ||||||||||||||| ||  ||||||||||||  |||||| || ||| || ||| ||  | ||||||||||||| |||||| |||   |||    
T  21537993 ctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatctgaactaaaatttgaatcagatacatcaactttcgttgactcaactctct 21537894  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||| ||||||| | |||| ||||||    
T  21537893 cttgtaaatagaaacggaaggagta 21537869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26471071 - 26471111
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  26471071 ctccggtcctatttataagagaattttggatcaacaaaagt 26471111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 30800460 - 30800556
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||  |||||| |  |||||||||| ||  | ||||||||||||||||| ||||||  ||||| | |||||| || || |||||||||    
T  30800460 gtcaacaaaagttgatgtatctatactgaattttgaatcagatacatcaacttttgttaacccaacgttctcatgtaaataagatcgaagggagtat 30800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 33668748 - 33668824
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    ||||||||||| || || |||||||| | ||||||| | ||||||||||||||| |||| ||| |  ||||||||||    
T  33668748 tataagagaaaattgggacaacaaaactcaatgtatctagactgaatttttaaccaaatgcattactttttgttgac 33668824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47216705 - 47216745
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  47216705 ctccggtactatttataagagaattttgggtcaacaaaagt 47216745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 47833617 - 47833741
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47833617 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 47833716  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  47833717 cttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 48336269 - 48336395
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  48336269 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 48336368  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  48336369 cttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3904807 - 3904682
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3904807 ctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattct 3904708  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  3904707 cttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 53337376 - 53337501
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  53337376 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 53337475  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  53337476 cttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 3372127 - 3372251
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  3372127 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattat 3372226  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  3372227 cttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6122017 - 6121893
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6122017 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6121918  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6121917 cttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20538810 - 20538686
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  20538810 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattct 20538711  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  20538710 cttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3992982 - 3993107
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3992982 ctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 3993081  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| |||||||||||||||    
T  3993082 cttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 24704376 - 24704501
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  24704376 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattct 24704475  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| ||||||||||||    
T  24704476 cttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42797738 - 42797862
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  42797738 ctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattct 42797837  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  42797838 cttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 46797731 - 46797855
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  46797731 ctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattct 46797830  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  46797831 cttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 33621805 - 33621928
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatctt 33621904  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||    
T  33621905 ataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 5986890 - 5987008
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986890 ctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 5986989  T
Q  109 taggaccggagggagtatt 127  Q
    ||||||||||| |||||||    
T  5986990 taggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47838741 - 47838615
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  47838741 ctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 47838642  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  47838641 cttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 52756681 - 52756806
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52756681 ctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 52756780  T
Q  101 cttataaataggaccggagggagtat 126  Q
     ||||||||||||||| |||||||||    
T  52756781 tttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 43900555 - 43900679
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43900555 ctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattct 43900654  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  43900655 cttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 51894706 - 51894582
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  51894706 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaattct 51894607  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  51894606 cttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 41469887 - 41469764
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  41469887 cggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctctt 41469788  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||    
T  41469787 ataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 3422073 - 3422192
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 3422171  T
Q  107 aataggaccggagggagtatt 127  Q
    |||||||||||||||||||||    
T  3422172 aataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7579316 - 7579440
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  7579316 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 7579415  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||| ||||    
T  7579416 cttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40913313 - 40913185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||| ||||    
T  40913313 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttct 40913214  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||| ||||    
T  40913213 cttataaataggaccggagggagtttttt 40913185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 41615794 - 41615676
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttata 41615695  T
Q  107 aataggaccggagggagta 125  Q
    |||||||||||| ||||||    
T  41615694 aataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33551207 - 33551312
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  33551207 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaattct 33551306  T
Q  101 cttata 106  Q
    ||||||    
T  33551307 cttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26231583 - 26231688
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||| ||||||||    
T  26231583 ctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgtaaaccgaaaattct 26231682  T
Q  101 cttata 106  Q
    ||||||    
T  26231683 cttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 17344219 - 17344346
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| |||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    ||||||||||||||||||| ||||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||| ||  |||||||||||||    
T  17344319 cttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25855093 - 25855182
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 94  Q
    |||||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  25855093 ggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacccaa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 29845656 - 29845769
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc-aacttttgttgacccaaaattctctta 104  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| |||||||| |||||||||||| ||      ||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaacttttgttgatcc------ctctta 29845748  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||||||||||||    
T  29845749 taaataggaccggagggagta 29845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||||||||||| || || |||||||||||||  ||||||||||| |||||||||||| | ||||||||| |||||||||||||||  | ||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  110 agg 112  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 17236862 - 17236919
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4780302 - 4780425
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||| |||||  |||  ||||||| ||||||  |  |  |||||||||  | |||||| |||||||||||||| ||| ||||    
T  4780302 ctccggtcttatttataagagacatttacatcagtaaaagtggatgtatccgatcc-aatttttaatcagatacattaacttttgttgaccaaaatttct 4780400  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  4780401 cttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43900673 - 43900545
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43900673 ctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttct 43900574  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  43900573 cttataaataggaccggagggagtatttt 43900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42797856 - 42797730
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42797856 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 42797757  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||| ||||||||||||| ||||||    
T  42797756 cttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47833735 - 47833609
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47833735 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 47833636  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  47833635 cttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17236912 - 17236839
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgta-tttggactgaatttttaactaaata 73  Q
    |||||||||||||||||||| |||||| |||||||||||||  ||||| ||| ||||||||||||||| |||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaaccaaata 17236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4780419 - 4780371
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4780419 ctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24704494 - 24704370
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  24704494 ctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 24704395  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  24704394 cttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3372245 - 3372119
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3372245 ctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3372146  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  3372145 cttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3993100 - 3992974
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3993100 ctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 3993001  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  3993000 cttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 43095336 - 43095230
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||| ||||| |||||||||| | ||||||| ||| |  |||||| ||| | |||||| || |||||||| ||||||  ||||||||||||    
T  43095336 tatttataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacattaatttttgttggcccaaacgtctcttataaat 43095237  T
Q  110 aggaccg 116  Q
    | |||||    
T  43095236 aagaccg 43095230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 44900086 - 44900208
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||| |||  |||||||||||||  || ||| ||| |  | | |||||| | |||| |||||||||||||||||| |   ||    
T  44900086 ctccggtcctatttataagagatattctggtcaacaaaagttgatatatctggtccaattgtttaaccagatacgtcaacttttgttgacccagacgact 44900185  T
Q  101 cttataaataggaccggagggag 123  Q
    ||  |||||||||||||||||||    
T  44900186 ctcgtaaataggaccggagggag 44900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  54 actgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    ||||||||||||||   |||||||||||||| |||||||| | ||||||||||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48336387 - 48336261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48336387 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48336288  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  48336287 cttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51894588 - 51894714
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||| ||||  ||||||||||||| ||| || |    
T  51894588 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaattttt 51894687  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  51894688 cttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3904689 - 3904814
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3904689 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3904788  T
Q  101 cttataaataggaccggagggagtat 126  Q
     ||||||||||||||||||| |||||    
T  3904789 tttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7579434 - 7579309
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||| ||| ||| ||||    
T  7579434 ctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttct 7579335  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  7579334 cttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 31013036 - 31013117
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||||| ||| |||||| |||||||||||  ||||||||||  | |||| ||||||| |||||||| ||||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacc 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 33551257 - 33551200
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  33551257 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 40913263 - 40913320
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  40913263 aaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47838623 - 47838748
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47838623 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 47838722  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| |||||| |||||    
T  47838723 cttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6121899 - 6122023
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  6121899 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 6121998  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6121999 cttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 20538760 - 20538816
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538760 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 45725905 - 45725977
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccg 116  Q
    |||||||| |||| |||| |||||||||||| | |||||||||||||  ||  ||||||||||||||||||||    
T  45725905 atgtatttagactaaattcttaactaaatacgttaacttttgttgacgaaactttctcttataaataggaccg 45725977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 53337494 - 53337370
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  53337494 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 53337395  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  53337394 cttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 9876653 - 9876739
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaa-tttttaactaaatacatcaacttttgttgacccaaa 95  Q
    |||||||||||||||||||| || ||||||| | ||||||| | |||| || |||||||| |||||||| || |||||||||||||||    
T  9876653 ctatttataagagaaatttacgttaacaaaatttaatgtatct-gactcaattttttaaccaaatacataaatttttgttgacccaaa 9876739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5987000 - 5986950
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 51  Q
    ||||||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 26231622 - 26231576
Alignment:
Q  80 cttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 44900130 - 44900080
Alignment:
Q  75 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||||||||    
T  44900130 atcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1716307 - 1716417
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||| | || |||||||||||||  |||||| ||  |  |  ||||||| | || |||||||||| ||||||| ||| ||||    
T  1716307 ctccggtcttatttataagagataatttggtcaacaaaagttgatgtatctgatccaa--ttttaaccagatgcatcaactttggttgacctaaacttct 1716404  T
Q  101 cttataaatagga 113  Q
    |||||||||||||    
T  1716405 cttataaatagga 1716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 25855139 - 25855082
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||| ||||||||||||| |||  |||||| |||||||||||| ||||||||||    
T  25855139 aaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41594660 - 41594765
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||| |  ||||||||||| || |||||||||||||  |||||| ||| |  |||||| ||| | ||||||||||||  ||||||||||  ||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaacttaagttgacccaactttct 41594759  T
Q  101 cttata 106  Q
    ||||||    
T  41594760 cttata 41594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3422184 - 3422144
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  3422184 ctccggtcctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40913195 - 40913235
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  40913195 ctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41469772 - 41469812
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  41469772 ctccggtcctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 46797781 - 46797725
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  46797781 aaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46797849 - 46797809
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  46797849 ctccggtcctatttataagagaattttgggtcaacaaaagt 46797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 6924802 - 6924724
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 85  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||||| || |||||| ||  | || ||||||||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaattttgaatcagatgcatcaacttttg 6924724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 41469840 - 41469899
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||| ||||||||||||||| ||| |||||||    
T  41469840 aaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 41615683 - 41615794
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    ||||||||||||||||||||||| || | |||||||||||  |||||||| |    || ||    | |||||||| |||||||||||||| ||  |||||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  102 ttataaatagga 113  Q
    ||||||||||||    
T  41615783 ttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 6422530 - 6422600
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat-aggaccggagggagtatt 127  Q
    |||||| ||||||||| ||||| ||||||||||| |||  |||||||||||| |||| |||| ||||||||    
T  6422530 aattttaaactaaatatatcaatttttgttgacctaaatatctcttataaataaggatcggatggagtatt 6422600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20538692 - 20538730
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  20538692 ctccggtcctatttataagagaattttgggtcaacaaaa 20538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 41594708 - 41594654
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||||  ||||||||||  | ||||||||| |||||    
T  41594708 atacatcaacttttgttgacccaactttctcttatatgtgggaccggagagagta 41594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 52756731 - 52756681
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||    
T  52756731 aaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 50430492 - 50430533
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  50430492 aaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 32822325 - 32822285
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  32822325 ctatttataagaaaaatttaggtcaacaaaaatggatgtat 32822285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33621920 - 33621880
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  33621920 ctccggtcctatttataagataattttgggtcaacaaaagt 33621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12866 - 12992
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12866 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 12965  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  12966 cttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12984 - 12858
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||| |||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12984 ctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12885  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  12884 cttataaataggaccggaggtagtatt 12858  T

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Target: scaffold0204 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23791 - 23917
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  23791 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 23890  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  23891 cttataaataggaccggagggagtatt 23917  T

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Target: scaffold0204; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23909 - 23783
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  23909 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 23810  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  23809 cttataaataggaccggaggtagtatt 23783  T

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Target: scaffold0464 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6255 - 6129
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  6255 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 6156  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  6155 cttataaataggaccggagggagtatt 6129  T

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Target: scaffold0464; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6137 - 6177
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  6137 ctccggtcctatttataagaaaattttgggtcaacaaaagt 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 1342 - 1453
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 1441  T
Q  102 ttataaatagga 113  Q
    ||||||||||||    
T  1442 ttataaatagga 1453  T

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Target: scaffold1707; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 1391 - 1342
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  1391 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 231427 - 231300
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| |||||  || ||||||||||||||||| || |||||    
T  231427 ctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattct 231328  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    | ||||||||||||||||||||||||||    
T  231327 cctataaataggaccggagggagtattt 231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 231379 - 231433
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||| |||||||||||| ||||  ||||||||||| ||||| |||||||||||    
T  231379 atacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 231309 - 231349
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  231309 ctccggtcctatttataggagaatattaggtcaacaaaagt 231349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 13845 - 13731
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc--aacttttgttgacccaaaattctctt 103  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| ||||||||  |||||||||||| ||      |||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaaacttttgttgatcc------ctctt 13753  T
Q  104 ataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||    
T  13752 ataaataggaccggagggagta 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 108 - 1
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||| ||||||  | |||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||| | |  ||||    
T  108 ctccggttctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgactttct 10  T
Q  101 cttataaat 109  Q
    |||||||||    
T  9 cttataaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 59 - 115
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||| |   ||||| ||||||||| ||||||||||||||    
T  59 aaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12477 - 12387
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||||||||||||| |||| |||||| ||||||   ||| ||||| || |||| ||||| | ||||||||  |||||||||||    
T  12477 ctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacc 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 12435 - 12480
Alignment:
Q  77 caacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||| |||||| |||  |||||||||||||||||||||||||    
T  12435 caactttttttgaccaaaatatctcttataaataggaccggaggga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 312747 - 312843
Alignment:
Q  24 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    |||| ||||||||||||| ||||||| ||  |  |||||| ||||| ||||||||| ||||||||| | |||| |||||| ||||||  ||||||||    
T  312747 attttggtcaacaaaagttaatgtatctgatccaaattttaaactagatacatcaatttttgttgatcaaaaagtctcttttaaataaaaccggagg 312843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 77466 - 77495
Alignment:
Q  98 tctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||||||||    
T  77466 tctcttataaataggaccggagggagtatt 77495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 125
Target Start/End: Complemental strand, 77372 - 77344
Alignment:
Q  97 ttctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||||||    
T  77372 ttctcttataaataggaccggagggagta 77344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 492332 - 492303
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  492332 ttctcttataaataggaccggagggagtat 492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 16772 - 16800
Alignment:
Q  100 tcttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||||||||||||    
T  16772 tcttataaataggaccggagggagtattt 16800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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