View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11768_low_32 (Length: 413)
Name: NF11768_low_32
Description: NF11768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11768_low_32 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 11170756 - 11171155
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170756 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
11170855 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11170856 |
aaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactattga |
11170955 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
11170956 |
tccaaggaaggtttctgctatctcgcgcattttcaccaataccatggatgagatttcttcagcagcaaaatgtttttcctcgtcattatagttaacaaca |
11171055 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
11171056 |
atcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctct |
11171155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 11209578 - 11209977
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209578 |
cctaagtcaaatatgaaaacatttctacgtccatgattaaatggtttcatgccaaagccatatgcaattgcagctgcagtaggctcattgagtattcgca |
11209677 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11209678 |
aaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcatccactgttga |
11209777 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
11209778 |
tccaaggaaggcttctgctgtctctcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtctttatagttaacaaca |
11209877 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11209878 |
atcatgggtttgtcatttaggtcgccaattactttgaatggccacaacttcacatcactttctactatggggtcgcaaaatttccgaccaattagcctct |
11209977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 11276140 - 11276539
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
11276140 |
cctaagtcaaatatgaaaacatttctacatccatgattaaatggtttcgtgttaaagccatatgcaattgcagctgcagtaggctcatttattattcgca |
11276239 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
11276240 |
taacgtttaggccagcaatagcacccgcatctcgagtagactggcgctgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttaa |
11276339 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11276340 |
tccaaggaaggcttctgctatctcgcgcattttcgccaataccatggatgagatttcttcagcagtaaaatgcttttcctcgtcattatagttaacaaca |
11276439 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
11276440 |
atcatgggtttgtcattcaggtcaccaattactttgaatggccacaacttcacatcactttgtactatgggatcactaaatttccgaccaattagcctct |
11276539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 11196909 - 11197308
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
11196909 |
cctaaatcaaaaatgaaaacatgtctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgca |
11197008 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11197009 |
taacattgaggccagcaataacacccgcatctcgagtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatccttcactgttga |
11197108 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||| | ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11197109 |
tccaaggtaagcttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaaca |
11197208 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| || | |||||||| |||| |||||||||||||| |
|
|
| T |
11197209 |
atcatgggtttgtcattgaggtcgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttcctaccaattagcctct |
11197308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 11156456 - 11156855
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||| |||||||||||||||| | |||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
11156456 |
cctaaatcaaaaatgaaaacatgtttacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgca |
11156555 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||| || | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11156556 |
taacattgaggccagcaataacacccgcatcttgggtggactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatccttcactgttga |
11156655 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||| | |||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
11156656 |
tccaaggtaaacttcagctatctcggccatttttgccaataccatcgatgagatttcttcagcagcaaaatgcttttcctcgtctttatagttaacaaca |
11156755 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||||||||| || | |||||||| |||| |||||||||||||| |
|
|
| T |
11156756 |
atcatgggtttgtcattgaggttgccaattactttgaagggccacgacttcatatcactttgtacgattgagtcgcaaaacttcctaccaattagcctct |
11156855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 11241428 - 11241065
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||| || ||||| | ||||| ||||||||||||||||| | ||||| || ||||||||||||||||||| |||||||||||||| ||| ||||| || |
|
|
| T |
11241428 |
cctaaatcgaaaattagaacatgtctacatccatgattaagagttttcatgttaaggccatatgcaattgcaactgcagtaggctcagtgattattcaca |
11241329 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11241328 |
aaactttgaggccagcaatagcacccgcatctcgaatagactggcgttgtgagtcattaaagtaagcaggcacagttataacaacatccttcactgttga |
11241229 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||| | ||||| ||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
11241228 |
tccaaggtaagcttcagctatcttggccatttttgccaataccatcgatgagatttcttcagcagcgaaatgcttttcctcgtcattatagttaacaata |
11241129 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgta |
364 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
11241128 |
gtcatgtgtttgtcattcaggtcgccaattactttgaagggccacaacttcatatcactttgta |
11241065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 320
Target Start/End: Original strand, 11200082 - 11200397
Alignment:
| Q |
9 |
aaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattg |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
11200082 |
aaaaatgaaaacatttctacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattg |
11200181 |
T |
|
| Q |
109 |
aggccagcaatagcacccgcaactcgagtagactggcgt----tgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttgatcca |
204 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
11200182 |
aggccagcaatagcacccgcatctcaagtagactggcgtacgttgtgaatcattaaagtatgtaggcacaattataacaacatccttcactgttgatcca |
11200281 |
T |
|
| Q |
205 |
aggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaacaatca |
304 |
Q |
| |
|
||| | ||||| || ||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11200282 |
aggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagttaacaacaatca |
11200381 |
T |
|
| Q |
305 |
tgggtttgtcattgag |
320 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
11200382 |
tgggtttgtcattgag |
11200397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 9 - 320
Target Start/End: Original strand, 11161331 - 11161654
Alignment:
| Q |
9 |
aaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggct--------cattgagtattcgca |
100 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| |||||| || ||||| |
|
|
| T |
11161331 |
aaaaatgaaaacatgtatacatccatgattaaaaggtttcatgtcaagaccatatgcaattgcatctgcagtaggctagtagagtcattgattactcgca |
11161430 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgt----tgtgagtcattaaagtatgcaggcacagttataacaacatcctccactg |
196 |
Q |
| |
|
||||||| |||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||| ||||| |
|
|
| T |
11161431 |
taacattaaggccaacaatagcacccgcatctcgagtagactggcgtacgttgtgaaacattaaagtatgtaggcacaattataacaacatccttcactg |
11161530 |
T |
|
| Q |
197 |
ttgatccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaac |
296 |
Q |
| |
|
||||||||||| | ||||| || ||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
11161531 |
ttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagttaac |
11161630 |
T |
|
| Q |
297 |
aacaatcatgggtttgtcattgag |
320 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
11161631 |
aacaatcatgggtttgtcattgag |
11161654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 32 - 368
Target Start/End: Original strand, 11133211 - 11133547
Alignment:
| Q |
32 |
catgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgcaac |
131 |
Q |
| |
|
|||||||||| |||||| |||||| |||||||||||||||||||| |||||||| |||| |||||||||||| ||||| || |||||| |||| ||| | |
|
|
| T |
11133211 |
catgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatc |
11133310 |
T |
|
| Q |
132 |
tcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttgatccaaggaaggcttctgctatctcgcgcatt |
231 |
Q |
| |
|
|| ||||| |||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||| | ||||||| ||||| || ||| |
|
|
| T |
11133311 |
tctagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatctcacgaatt |
11133410 |
T |
|
| Q |
232 |
tttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaacaatcatgggtttgtcattgaggtcgccaatta |
331 |
Q |
| |
|
|||| ||||||||| ||||| ||||| ||||||| |||||| |||||||| |||| || || |||||||| ||||||||||||| | | | ||||||| |
|
|
| T |
11133411 |
tttgtcaataccattgatgatatttcctcagcagcaaaatgtttttcctctccattgtaattgacaacaatattgggtttgtcatttatgccaccaatta |
11133510 |
T |
|
| Q |
332 |
ctttgaatggccacaacttcacatcactttgtactat |
368 |
Q |
| |
|
|||| ||||||||||| |||| |||||| || ||||| |
|
|
| T |
11133511 |
ctttaaatggccacaatttcatatcactctgaactat |
11133547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 1074 - 1452
Alignment:
| Q |
1 |
cctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1074 |
cctaagtcaaaaatgaaaacatttctatgtccatgtg---atggttttgtgtcaaagccatatgcaattgcagctgcagtaggctcattgagtattccca |
1170 |
T |
|
| Q |
101 |
taacattgaggccagcaatagcacccgcaactcgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1171 |
aaacattgaggccagcaatagcacctgcatctcgagtagattggcgttgtgagtcattaaagtatgcaggcacagttataacaacatcctccactgttga |
1270 |
T |
|
| Q |
201 |
tccaaggaaggcttctgctatctcgcgcatttttgccaataccatggatgagatttcttcagcagaaaaatgcttttcctcgtcattatagttaacaaca |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1271 |
tccaaggaaggcttctgctgtctcgcgcattttcgccaataccatggatgagatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaaca |
1370 |
T |
|
| Q |
301 |
atcatgggtttgtcattgaggtcgccaattactttgaatggccacaacttcacatcactttgtactatgggatcgcaaaatttccgaccaattagcctct |
400 |
Q |
| |
|
||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1371 |
atcatgggtttat------------------gtatgaatggccacaacttcacatcactttctactatgggatcgcaaaatttccgaccaattagcctct |
1452 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 8382805 - 8382734
Alignment:
| Q |
54 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||| ||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
8382805 |
aaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggccagcaatcgcacc |
8382734 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 8602213 - 8602284
Alignment:
| Q |
54 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| |||||||| ||||| |
|
|
| T |
8602213 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcacc |
8602284 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 10494306 - 10494232
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| ||||||||||||||||| |
|
|
| T |
10494306 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcacc |
10494232 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 13333388 - 13333314
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| |||||| || | ||| ||||||||||||||||| |
|
|
| T |
13333388 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcacc |
13333314 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 8585638 - 8585564
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | ||||||||| ||||||||||| ||||| |
|
|
| T |
8585638 |
gtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcacc |
8585564 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 8628768 - 8628842
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | ||||||||| ||||||||||| ||||| |
|
|
| T |
8628768 |
gtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcacc |
8628842 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 27830807 - 27830733
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||| | | ||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
27830807 |
gtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc |
27830733 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 29577594 - 29577532
Alignment:
| Q |
58 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaata |
120 |
Q |
| |
|
|||||||||| |||||| ||||| || ||||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
29577594 |
ccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaata |
29577532 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 8654686 - 8654760
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||||||| || || || || || |||||||| ||||| |
|
|
| T |
8654686 |
gtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcacc |
8654760 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 8667655 - 8667725
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatag |
121 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| || |||||||||| |
|
|
| T |
8667655 |
gtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccagcaatag |
8667725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 8671562 - 8671492
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatag |
121 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| || |||||||||| |
|
|
| T |
8671562 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaagtccagcaatag |
8671492 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 6789749 - 6789822
Alignment:
| Q |
52 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||| ||||| || || || ||||||| |||||| |||||||| || |||||||| ||||| |
|
|
| T |
6789749 |
tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcacc |
6789822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 8538275 - 8538340
Alignment:
| Q |
54 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaat |
119 |
Q |
| |
|
|||||| ||||||| ||||| || ||||| ||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
8538275 |
aaggccgtatgcaagagcagcagctgtaggttcattgattatccgcattacattgaggccagcaat |
8538340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 7877662 - 7877598
Alignment:
| Q |
54 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaa |
118 |
Q |
| |
|
|||||||||||||| ||||| ||||| || ||||| | ||| ||||||||||||||||| |||| |
|
|
| T |
7877662 |
aaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaa |
7877598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 9335822 - 9335753
Alignment:
| Q |
52 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatag |
121 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||||| ||| || || ||||| ||||||||||||| |
|
|
| T |
9335822 |
tcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatag |
9335753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 30775489 - 30775562
Alignment:
| Q |
52 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||||| | ||||| ||||||||| || |||||||| ||||| |
|
|
| T |
30775489 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcacc |
30775562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 35132684 - 35132758
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | || || |||||||||| | |||||||||||||| |
|
|
| T |
35132684 |
gtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagcacc |
35132758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 7542462 - 7542540
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacccgca |
129 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | | | ||||||||||||||||||||| ||||||||| |
|
|
| T |
7542462 |
gtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgca |
7542540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 16661924 - 16661850
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatagcacc |
125 |
Q |
| |
|
|||||||||||||||||| || |||||||| || ||||||| ||| | || ||| || ||||||||||| ||||| |
|
|
| T |
16661924 |
gtcaaggccatatgcaatagctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaatggcacc |
16661850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 34466725 - 34466655
Alignment:
| Q |
51 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcataacattgaggccagcaatag |
121 |
Q |
| |
|
|||||| ||||||||||| || || ||||| || ||||||| |||| ||| |||||| ||||||||||||| |
|
|
| T |
34466725 |
gtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaatag |
34466655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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