View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11768_low_52 (Length: 275)

Name: NF11768_low_52
Description: NF11768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11768_low_52
NF11768_low_52
[»] chr2 (68 HSPs)
chr2 (1-130)||(37990008-37990137)
chr2 (1-128)||(3055564-3055691)
chr2 (1-127)||(41478637-41478763)
chr2 (1-126)||(44398692-44398817)
chr2 (1-125)||(13197710-13197834)
chr2 (1-125)||(15896848-15896972)
chr2 (1-126)||(44397553-44397678)
chr2 (1-127)||(6648517-6648643)
chr2 (1-127)||(9047753-9047879)
chr2 (1-127)||(16243781-16243907)
chr2 (1-127)||(37666608-37666734)
chr2 (1-126)||(38917521-38917646)
chr2 (1-125)||(15372232-15372356)
chr2 (1-125)||(16044317-16044441)
chr2 (1-126)||(13344490-13344615)
chr2 (1-125)||(12337937-12338061)
chr2 (6-127)||(41492894-41493015)
chr2 (1-126)||(30099181-30099306)
chr2 (1-106)||(4683951-4684056)
chr2 (1-127)||(12170397-12170523)
chr2 (23-122)||(44804581-44804680)
chr2 (14-122)||(16734802-16734910)
chr2 (6-125)||(13724102-13724221)
chr2 (1-116)||(31150659-31150769)
chr2 (26-85)||(41453090-41453149)
chr2 (1-129)||(41478645-41478773)
chr2 (1-127)||(15372224-15372350)
chr2 (1-127)||(37990019-37990145)
chr2 (1-126)||(3055557-3055682)
chr2 (1-126)||(15896841-15896966)
chr2 (1-126)||(44398685-44398810)
chr2 (1-125)||(13197716-13197840)
chr2 (6-126)||(23227271-23227391)
chr2 (1-128)||(13724108-13724235)
chr2 (3-126)||(44397546-44397669)
chr2 (69-126)||(4684006-4684063)
chr2 (69-130)||(16044391-16044452)
chr2 (5-90)||(36688892-36688977)
chr2 (1-114)||(41492902-41493015)
chr2 (69-125)||(37666684-37666740)
chr2 (4-124)||(45294333-45294452)
chr2 (69-127)||(23227346-23227404)
chr2 (5-115)||(23986788-23986898)
chr2 (1-114)||(15271060-15271173)
chr2 (2-119)||(16243790-16243907)
chr2 (1-94)||(30852648-30852741)
chr2 (1-126)||(38917528-38917653)
chr2 (10-66)||(4553069-4553125)
chr2 (1-125)||(6648525-6648649)
chr2 (1-41)||(9047761-9047801)
chr2 (1-41)||(12337943-12337983)
chr2 (69-125)||(31150653-31150709)
chr2 (69-129)||(39724284-39724344)
chr2 (1-128)||(13344481-13344608)
chr2 (69-128)||(40714016-40714075)
chr2 (97-127)||(13775832-13775862)
chr2 (9-111)||(36089457-36089559)
chr2 (97-130)||(7765788-7765821)
chr2 (9-126)||(20900678-20900794)
chr2 (97-126)||(30852719-30852748)
chr2 (97-126)||(42263468-42263497)
chr2 (69-125)||(12170473-12170529)
chr2 (1-41)||(16044323-16044363)
chr2 (71-111)||(20900678-20900718)
chr2 (1-41)||(30099188-30099228)
chr2 (71-115)||(36688892-36688936)
chr2 (1-41)||(37666616-37666656)
chr2 (1-41)||(44804584-44804624)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-125)||(49511-49635)
scaffold0009 (1-131)||(49499-49629)
[»] chr3 (74 HSPs)
chr3 (1-128)||(10297985-10298112)
chr3 (1-135)||(40690986-40691120)
chr3 (1-130)||(17653718-17653847)
chr3 (1-126)||(49823380-49823505)
chr3 (1-125)||(19557052-19557176)
chr3 (1-126)||(22721937-22722062)
chr3 (1-126)||(37508927-37509052)
chr3 (1-125)||(2787832-2787956)
chr3 (1-125)||(34080030-34080154)
chr3 (1-125)||(48340403-48340527)
chr3 (4-127)||(8817384-8817507)
chr3 (1-126)||(4238600-4238725)
chr3 (1-126)||(8437431-8437556)
chr3 (1-130)||(44785391-44785520)
chr3 (1-126)||(46208036-46208161)
chr3 (1-126)||(51406679-51406804)
chr3 (1-125)||(21295326-21295450)
chr3 (1-125)||(38964398-38964522)
chr3 (4-122)||(9111497-9111615)
chr3 (1-122)||(42507358-42507479)
chr3 (1-129)||(36095676-36095804)
chr3 (1-125)||(6013336-6013460)
chr3 (1-125)||(42170346-42170470)
chr3 (4-125)||(35513482-35513603)
chr3 (2-126)||(33942931-33943055)
chr3 (1-125)||(9213522-9213646)
chr3 (3-125)||(5323214-5323337)
chr3 (4-125)||(34988084-34988205)
chr3 (71-128)||(9027139-9027196)
chr3 (1-126)||(46208029-46208154)
chr3 (1-129)||(9213512-9213640)
chr3 (1-125)||(17653712-17653836)
chr3 (1-125)||(37508921-37509045)
chr3 (1-127)||(21295332-21295458)
chr3 (9-128)||(26019477-26019595)
chr3 (1-127)||(4238592-4238718)
chr3 (1-127)||(34080036-34080162)
chr3 (1-126)||(19557058-19557183)
chr3 (2-127)||(22721929-22722054)
chr3 (7-80)||(43323072-43323145)
chr3 (1-126)||(49823387-49823512)
chr3 (1-125)||(10297979-10298103)
chr3 (2-129)||(8817393-8817520)
chr3 (69-128)||(44785470-44785529)
chr3 (71-125)||(2131748-2131802)
chr3 (12-78)||(8951943-8952009)
chr3 (10-95)||(29285790-29285873)
chr3 (1-127)||(38964390-38964516)
chr3 (5-127)||(42170356-42170478)
chr3 (1-127)||(42507361-42507487)
chr3 (2-91)||(8092595-8092684)
chr3 (1-50)||(33128212-33128261)
chr3 (69-126)||(36095754-36095811)
chr3 (1-128)||(9111500-9111627)
chr3 (29-125)||(30443762-30443858)
chr3 (10-126)||(33128205-33128319)
chr3 (69-125)||(35513473-35513529)
chr3 (1-125)||(48340397-48340521)
chr3 (75-126)||(34988074-34988125)
chr3 (69-119)||(2787906-2787956)
chr3 (1-127)||(8437423-8437549)
chr3 (1-119)||(40691002-40691120)
chr3 (1-122)||(6013342-6013463)
chr3 (66-127)||(45652067-45652128)
chr3 (69-113)||(43323072-43323116)
chr3 (1-125)||(51406673-51406797)
chr3 (5-48)||(26001141-26001184)
chr3 (1-95)||(2131702-2131796)
chr3 (69-126)||(33943006-33943063)
chr3 (1-41)||(2787838-2787878)
chr3 (1-41)||(9027148-9027188)
chr3 (63-127)||(34381465-34381529)
chr3 (98-126)||(40215022-40215050)
chr3 (1-41)||(44785402-44785442)
[»] chr8 (68 HSPs)
chr8 (1-127)||(7785776-7785902)
chr8 (1-126)||(54611-54736)
chr8 (1-126)||(2890161-2890286)
chr8 (1-134)||(32114466-32114599)
chr8 (1-125)||(6552661-6552785)
chr8 (1-128)||(39571200-39571327)
chr8 (1-127)||(7805697-7805823)
chr8 (1-127)||(44498185-44498311)
chr8 (1-126)||(43199353-43199478)
chr8 (1-125)||(3304278-3304402)
chr8 (1-129)||(12763650-12763778)
chr8 (1-128)||(32211360-32211487)
chr8 (1-126)||(25600999-25601124)
chr8 (1-129)||(15888348-15888476)
chr8 (1-125)||(31654619-31654743)
chr8 (1-125)||(33289261-33289385)
chr8 (1-119)||(12343146-12343264)
chr8 (1-129)||(7012177-7012305)
chr8 (9-126)||(13578871-13578988)
chr8 (1-126)||(8587176-8587301)
chr8 (1-126)||(28463617-28463742)
chr8 (1-127)||(27422199-27422322)
chr8 (1-57)||(4245649-4245705)
chr8 (7-118)||(24691986-24692096)
chr8 (1-110)||(17006917-17007026)
chr8 (1-110)||(17570221-17570330)
chr8 (1-126)||(33057600-33057725)
chr8 (69-125)||(8587170-8587226)
chr8 (69-120)||(28463616-28463667)
chr8 (1-127)||(54618-54744)
chr8 (1-127)||(2890168-2890294)
chr8 (1-127)||(7785784-7785910)
chr8 (1-126)||(25601006-25601131)
chr8 (1-126)||(43199360-43199485)
chr8 (69-129)||(4245655-4245715)
chr8 (1-125)||(6552655-6552779)
chr8 (1-125)||(12343146-12343270)
chr8 (30-118)||(13246801-13246889)
chr8 (1-125)||(31654613-31654737)
chr8 (69-127)||(7805773-7805831)
chr8 (4-49)||(27422266-27422311)
chr8 (69-125)||(3304352-3304408)
chr8 (69-125)||(15888426-15888482)
chr8 (74-122)||(17006914-17006962)
chr8 (74-122)||(17570285-17570333)
chr8 (72-124)||(30171483-30171535)
chr8 (69-125)||(32114549-32114605)
chr8 (1-125)||(39571209-39571333)
chr8 (69-125)||(44498261-44498317)
chr8 (2-52)||(13246801-13246851)
chr8 (71-117)||(15688038-15688084)
chr8 (7-109)||(24202989-24203091)
chr8 (1-127)||(33289267-33289393)
chr8 (69-126)||(12763728-12763785)
chr8 (71-128)||(24692054-24692111)
chr8 (81-126)||(32211449-32211494)
chr8 (10-90)||(28999083-28999163)
chr8 (71-127)||(33057592-33057648)
chr8 (58-109)||(35564706-35564757)
chr8 (79-125)||(7012171-7012217)
chr8 (1-39)||(32211369-32211407)
chr8 (1-41)||(3304284-3304324)
chr8 (1-41)||(7012255-7012295)
chr8 (1-41)||(7805705-7805745)
chr8 (1-41)||(12763660-12763700)
chr8 (98-126)||(41915592-41915620)
chr8 (92-128)||(43332556-43332592)
chr8 (1-41)||(44498193-44498233)
[»] chr7 (52 HSPs)
chr7 (1-127)||(1738445-1738571)
chr7 (1-127)||(7240755-7240881)
chr7 (1-125)||(46840866-46840990)
chr7 (1-127)||(7482231-7482357)
chr7 (1-127)||(38063911-38064037)
chr7 (5-126)||(9268766-9268887)
chr7 (1-125)||(22285705-22285829)
chr7 (1-125)||(23314139-23314263)
chr7 (1-125)||(31319399-31319523)
chr7 (1-127)||(36583401-36583527)
chr7 (1-126)||(1565728-1565853)
chr7 (1-125)||(94318-94442)
chr7 (1-126)||(28536750-28536875)
chr7 (1-125)||(36016196-36016320)
chr7 (1-125)||(38441466-38441590)
chr7 (1-126)||(4790254-4790379)
chr7 (11-119)||(33418392-33418500)
chr7 (1-118)||(40840126-40840243)
chr7 (5-125)||(9575419-9575539)
chr7 (1-118)||(7269412-7269529)
chr7 (7-126)||(7661088-7661207)
chr7 (1-128)||(46840857-46840984)
chr7 (1-127)||(1738453-1738579)
chr7 (1-127)||(7240747-7240873)
chr7 (1-127)||(22285697-22285823)
chr7 (69-125)||(36016270-36016326)
chr7 (69-128)||(1565803-1565862)
chr7 (1-119)||(94324-94442)
chr7 (1-126)||(7482224-7482349)
chr7 (1-127)||(9268754-9268880)
chr7 (5-126)||(7661075-7661196)
chr7 (67-128)||(9575406-9575467)
chr7 (69-126)||(28536825-28536882)
chr7 (69-126)||(38063987-38064044)
chr7 (69-125)||(23314213-23314269)
chr7 (69-125)||(31319473-31319529)
chr7 (1-125)||(36583395-36583519)
chr7 (71-125)||(7269481-7269535)
chr7 (69-127)||(24710743-24710801)
chr7 (1-126)||(4790247-4790372)
chr7 (1-125)||(38441460-38441584)
chr7 (71-124)||(46877666-46877719)
chr7 (1-41)||(23314145-23314185)
chr7 (78-118)||(29993251-29993291)
chr7 (1-41)||(33418460-33418500)
chr7 (2-41)||(40840126-40840165)
chr7 (2-49)||(46877666-46877713)
chr7 (100-130)||(28677311-28677341)
chr7 (97-126)||(5347721-5347750)
chr7 (1-41)||(31319405-31319445)
chr7 (5-41)||(36016206-36016242)
chr7 (5-41)||(38063923-38063959)
[»] chr6 (53 HSPs)
chr6 (1-127)||(26602329-26602455)
chr6 (1-126)||(6330121-6330246)
chr6 (1-126)||(11572144-11572269)
chr6 (1-125)||(2830341-2830465)
chr6 (1-129)||(8099536-8099664)
chr6 (1-125)||(8382969-8383093)
chr6 (4-126)||(13853592-13853714)
chr6 (1-128)||(9644702-9644829)
chr6 (1-128)||(9650719-9650846)
chr6 (1-128)||(33052791-33052918)
chr6 (1-126)||(35031000-35031125)
chr6 (1-126)||(6068572-6068697)
chr6 (5-125)||(8417793-8417913)
chr6 (1-125)||(6143560-6143684)
chr6 (11-126)||(28747133-28747248)
chr6 (25-125)||(17992018-17992118)
chr6 (1-126)||(22896477-22896593)
chr6 (1-87)||(13043764-13043850)
chr6 (7-126)||(3788048-3788168)
chr6 (10-130)||(7596972-7597092)
chr6 (3-91)||(6068974-6069062)
chr6 (5-126)||(14936456-14936577)
chr6 (1-126)||(8099529-8099654)
chr6 (1-127)||(8382975-8383101)
chr6 (1-126)||(2830334-2830459)
chr6 (1-126)||(11572151-11572276)
chr6 (1-125)||(6330115-6330239)
chr6 (14-110)||(6549902-6549997)
chr6 (1-125)||(26602323-26602447)
chr6 (4-127)||(8417802-8417925)
chr6 (71-125)||(8186443-8186497)
chr6 (1-127)||(13853599-13853725)
chr6 (69-127)||(14936531-14936589)
chr6 (69-127)||(33052868-33052926)
chr6 (1-51)||(3788111-3788161)
chr6 (1-127)||(6068564-6068690)
chr6 (3-128)||(8186366-8186489)
chr6 (69-119)||(31849586-31849636)
chr6 (69-126)||(6143553-6143610)
chr6 (84-125)||(22896471-22896512)
chr6 (69-126)||(35031075-35031132)
chr6 (1-41)||(9644780-9644820)
chr6 (1-41)||(9650797-9650837)
chr6 (24-126)||(5685368-5685470)
chr6 (1-39)||(35031007-35031045)
chr6 (5-110)||(3421588-3421693)
chr6 (84-125)||(9644696-9644737)
chr6 (84-125)||(9650713-9650754)
chr6 (6-39)||(12473651-12473684)
chr6 (69-117)||(6069014-6069062)
chr6 (81-125)||(13043758-13043802)
chr6 (58-106)||(33393165-33393213)
chr6 (97-129)||(33859611-33859643)
[»] chr5 (63 HSPs)
chr5 (1-127)||(9395356-9395482)
chr5 (1-129)||(41989403-41989531)
chr5 (1-127)||(13103030-13103156)
chr5 (1-126)||(36563537-36563662)
chr5 (1-125)||(37148955-37149079)
chr5 (1-127)||(13033057-13033183)
chr5 (1-126)||(11795174-11795299)
chr5 (5-125)||(23359952-23360072)
chr5 (1-126)||(17025630-17025755)
chr5 (1-125)||(20848080-20848203)
chr5 (1-127)||(26350348-26350474)
chr5 (1-126)||(37641959-37642085)
chr5 (1-125)||(582995-583118)
chr5 (19-126)||(21575970-21576077)
chr5 (4-122)||(4443969-4444087)
chr5 (16-125)||(6126845-6126954)
chr5 (1-66)||(38361750-38361815)
chr5 (9-119)||(3549553-3549663)
chr5 (19-111)||(2366352-2366444)
chr5 (2-83)||(13539909-13539986)
chr5 (4-127)||(966157-966280)
chr5 (1-130)||(17025619-17025748)
chr5 (1-125)||(9395350-9395474)
chr5 (44-127)||(35904448-35904529)
chr5 (1-108)||(2629561-2629668)
chr5 (67-130)||(4443955-4444018)
chr5 (1-128)||(36563544-36563671)
chr5 (1-112)||(39290781-39290891)
chr5 (69-127)||(37149029-37149087)
chr5 (69-126)||(13033050-13033107)
chr5 (1-126)||(13103023-13103148)
chr5 (1-126)||(23359941-23360066)
chr5 (10-117)||(36595782-36595886)
chr5 (1-126)||(41989413-41989538)
chr5 (58-122)||(9006885-9006949)
chr5 (69-125)||(26350424-26350480)
chr5 (10-109)||(40138806-40138906)
chr5 (69-127)||(582987-583045)
chr5 (1-39)||(11574166-11574204)
chr5 (69-127)||(20848072-20848130)
chr5 (10-111)||(18167334-18167435)
chr5 (30-91)||(39030587-39030648)
chr5 (1-49)||(966224-966272)
chr5 (1-41)||(6126908-6126948)
chr5 (1-125)||(11795168-11795292)
chr5 (69-125)||(39290775-39290830)
chr5 (2-84)||(27080981-27081063)
chr5 (68-118)||(27081013-27081063)
chr5 (81-127)||(37641951-37641997)
chr5 (95-125)||(38361713-38361743)
chr5 (98-127)||(1643466-1643495)
chr5 (1-50)||(3549553-3549602)
chr5 (76-125)||(11574161-11574210)
chr5 (81-118)||(13539949-13539986)
chr5 (72-129)||(35584450-35584507)
chr5 (9-53)||(2366352-2366396)
chr5 (1-49)||(4444036-4444084)
chr5 (1-49)||(13033127-13033175)
chr5 (1-41)||(21576030-21576070)
chr5 (60-128)||(26395082-26395150)
chr5 (3-39)||(36595782-36595818)
chr5 (1-41)||(37148961-37149001)
chr5 (1-41)||(37642038-37642078)
[»] chr1 (70 HSPs)
chr1 (1-127)||(14984843-14984969)
chr1 (1-125)||(27159358-27159482)
chr1 (1-125)||(31842795-31842919)
chr1 (1-125)||(39401966-39402090)
chr1 (1-125)||(44668093-44668217)
chr1 (1-127)||(9981653-9981779)
chr1 (1-127)||(12483626-12483752)
chr1 (1-126)||(47216698-47216823)
chr1 (1-129)||(1050894-1051022)
chr1 (1-125)||(11795939-11796063)
chr1 (1-125)||(26471065-26471189)
chr1 (1-128)||(34042702-34042829)
chr1 (3-125)||(47777481-47777603)
chr1 (1-119)||(44955212-44955330)
chr1 (7-126)||(25694331-25694450)
chr1 (124-257)||(31159108-31159242)
chr1 (5-127)||(47588335-47588457)
chr1 (1-105)||(23278021-23278125)
chr1 (1-127)||(47969700-47969827)
chr1 (5-126)||(17556762-17556884)
chr1 (1-128)||(11897060-11897187)
chr1 (1-125)||(16448108-16448232)
chr1 (10-125)||(11989796-11989911)
chr1 (1-126)||(37552147-37552272)
chr1 (1-115)||(12213484-12213598)
chr1 (1-127)||(12483634-12483760)
chr1 (71-126)||(16448184-16448239)
chr1 (1-126)||(11897053-11897178)
chr1 (1-127)||(27159364-27159490)
chr1 (3-125)||(37552141-37552263)
chr1 (1-127)||(44668099-44668225)
chr1 (1-126)||(9981646-9981771)
chr1 (44-128)||(1598379-1598461)
chr1 (1-125)||(31842801-31842925)
chr1 (1-125)||(39401972-39402096)
chr1 (1-125)||(44955212-44955336)
chr1 (1-128)||(11795930-11796057)
chr1 (7-118)||(12043616-12043726)
chr1 (1-128)||(14984834-14984961)
chr1 (69-127)||(26471139-26471197)
chr1 (69-125)||(47216773-47216829)
chr1 (1-117)||(47777487-47777603)
chr1 (79-130)||(1050883-1050934)
chr1 (60-127)||(5392211-5392278)
chr1 (6-111)||(12047117-12047223)
chr1 (67-126)||(12213546-12213605)
chr1 (1-126)||(17556751-17556877)
chr1 (1-127)||(25694317-25694443)
chr1 (29-110)||(571542-571622)
chr1 (1-126)||(34042695-34042820)
chr1 (3-115)||(12062568-12062679)
chr1 (5-117)||(12062568-12062679)
chr1 (71-127)||(21537945-21538001)
chr1 (81-125)||(23278087-23278131)
chr1 (67-125)||(47969694-47969753)
chr1 (29-91)||(3739838-3739900)
chr1 (31-125)||(19391910-19392004)
chr1 (31-89)||(29855084-29855142)
chr1 (69-127)||(47588411-47588469)
chr1 (74-127)||(5392145-5392198)
chr1 (4-53)||(5392218-5392267)
chr1 (18-87)||(11774536-11774605)
chr1 (65-130)||(19610775-19610840)
chr1 (1-49)||(1050964-1051012)
chr1 (8-116)||(12069499-12069607)
chr1 (1-125)||(21537869-21537993)
chr1 (1-41)||(26471071-26471111)
chr1 (30-126)||(30800460-30800556)
chr1 (14-90)||(33668748-33668824)
chr1 (1-41)||(47216705-47216745)
[»] chr4 (76 HSPs)
chr4 (1-125)||(47833617-47833741)
chr4 (1-127)||(48336269-48336395)
chr4 (1-126)||(3904682-3904807)
chr4 (1-126)||(53337376-53337501)
chr4 (1-125)||(3372127-3372251)
chr4 (1-125)||(6121893-6122017)
chr4 (1-125)||(20538686-20538810)
chr4 (1-126)||(3992982-3993107)
chr4 (1-126)||(24704376-24704501)
chr4 (1-125)||(42797738-42797862)
chr4 (1-125)||(46797731-46797855)
chr4 (4-127)||(33621805-33621928)
chr4 (9-127)||(5986890-5987008)
chr4 (1-127)||(47838615-47838741)
chr4 (1-126)||(52756681-52756806)
chr4 (1-125)||(43900555-43900679)
chr4 (1-125)||(51894582-51894706)
chr4 (4-127)||(41469764-41469887)
chr4 (7-127)||(3422073-3422192)
chr4 (1-125)||(7579316-7579440)
chr4 (1-129)||(40913185-40913313)
chr4 (7-125)||(41615676-41615794)
chr4 (1-106)||(33551207-33551312)
chr4 (1-106)||(26231583-26231688)
chr4 (1-128)||(17344219-17344346)
chr4 (5-94)||(25855093-25855182)
chr4 (6-125)||(29845656-29845769)
chr4 (10-112)||(50430431-50430533)
chr4 (69-126)||(17236862-17236919)
chr4 (1-125)||(4780302-4780425)
chr4 (1-129)||(43900545-43900673)
chr4 (1-127)||(42797730-42797856)
chr4 (1-127)||(47833609-47833735)
chr4 (1-73)||(17236839-17236912)
chr4 (1-49)||(4780371-4780419)
chr4 (1-125)||(24704370-24704494)
chr4 (1-127)||(3372119-3372245)
chr4 (1-127)||(3992974-3993100)
chr4 (10-116)||(43095230-43095336)
chr4 (1-123)||(44900086-44900208)
chr4 (54-120)||(45478151-45478217)
chr4 (1-127)||(48336261-48336387)
chr4 (1-127)||(51894588-51894714)
chr4 (1-126)||(3904689-3904814)
chr4 (1-126)||(7579309-7579434)
chr4 (10-91)||(31013036-31013117)
chr4 (69-126)||(33551200-33551257)
chr4 (69-126)||(40913263-40913320)
chr4 (1-126)||(47838623-47838748)
chr4 (1-125)||(6121899-6122023)
chr4 (69-125)||(20538760-20538816)
chr4 (44-116)||(45725905-45725977)
chr4 (1-125)||(53337370-53337494)
chr4 (9-95)||(9876653-9876739)
chr4 (71-125)||(1716301-1716355)
chr4 (1-51)||(5986950-5987000)
chr4 (80-126)||(26231576-26231622)
chr4 (75-125)||(44900080-44900130)
chr4 (1-113)||(1716307-1716417)
chr4 (69-126)||(25855082-25855139)
chr4 (1-106)||(41594660-41594765)
chr4 (1-41)||(3422144-3422184)
chr4 (1-41)||(40913195-40913235)
chr4 (1-41)||(41469772-41469812)
chr4 (69-125)||(46797725-46797781)
chr4 (1-41)||(46797809-46797849)
chr4 (6-85)||(6924724-6924802)
chr4 (69-128)||(41469840-41469899)
chr4 (2-113)||(41615683-41615794)
chr4 (58-127)||(6422530-6422600)
chr4 (1-39)||(20538692-20538730)
chr4 (71-125)||(41594654-41594708)
chr4 (69-119)||(52756681-52756731)
chr4 (69-110)||(50430492-50430533)
chr4 (9-49)||(32822285-32822325)
chr4 (1-41)||(33621880-33621920)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-127)||(12866-12992)
scaffold0482 (1-127)||(12858-12984)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-127)||(23791-23917)
scaffold0204 (1-127)||(23783-23909)
[»] scaffold0464 (3 HSPs)
scaffold0464 (1-127)||(6129-6255)
scaffold0464 (79-125)||(6215-6261)
scaffold0464 (1-41)||(6137-6177)
[»] scaffold1707 (2 HSPs)
scaffold1707 (2-113)||(1342-1453)
scaffold1707 (69-118)||(1342-1391)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-128)||(231300-231427)
scaffold0011 (71-125)||(231379-231433)
scaffold0011 (1-41)||(231309-231349)
[»] scaffold0415 (1 HSPs)
scaffold0415 (6-125)||(13731-13845)
[»] scaffold0650 (2 HSPs)
scaffold0650 (1-109)||(1-108)
scaffold0650 (69-126)||(59-115)
[»] scaffold0171 (2 HSPs)
scaffold0171 (1-91)||(12387-12477)
scaffold0171 (77-122)||(12435-12480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-120)||(312747-312843)
[»] scaffold0007 (2 HSPs)
scaffold0007 (98-127)||(77466-77495)
scaffold0007 (97-125)||(77344-77372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (97-126)||(492303-492332)
[»] scaffold0236 (1 HSPs)
scaffold0236 (100-128)||(16772-16800)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 37990137 - 37990008
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37990137 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37990038  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    ||||||||||||||||||||||||||||||    
T  37990037 cttataaataggaccggagggagtatttta 37990008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3055564 - 3055691
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3055564 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 3055663  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  3055664 cttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 41478763 - 41478637
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41478763 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 41478664  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  41478663 cttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44398692 - 44398817
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44398692 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44398791  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  44398792 cttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13197834 - 13197710
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13197834 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 13197735  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  13197734 cttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15896848 - 15896972
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15896848 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 15896947  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  15896948 cttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44397553 - 44397678
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44397553 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44397652  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  44397653 cttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6648643 - 6648517
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6648643 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6648544  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  6648543 cttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9047879 - 9047753
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9047879 ctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9047780  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  9047779 cttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16243907 - 16243781
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 16243808  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||| ||||||||    
T  16243807 cttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 37666734 - 37666608
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  37666734 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 37666635  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  37666634 cttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38917646 - 38917521
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38917646 ctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 38917547  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  38917546 cttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15372232 - 15372356
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  15372232 ctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattct 15372331  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  15372332 cttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16044441 - 16044317
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16044441 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 16044342  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  16044341 cttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13344490 - 13344615
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  13344490 ctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 13344589  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  13344590 cttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12338061 - 12337937
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12338061 ctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 12337962  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  12337961 cttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 41493015 - 41492894
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttat 41492916  T
Q  106 aaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||    
T  41492915 aaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 30099306 - 30099181
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||    
T  30099306 ctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattct 30099207  T
Q  101 cttataaataggaccggagggagtat 126  Q
    || |||||||||||||||||||||||    
T  30099206 ctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4684056 - 4683951
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||    
T  4684056 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtaaaccgaaaattct 4683957  T
Q  101 cttata 106  Q
    ||||||    
T  4683956 cttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12170523 - 12170397
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  12170523 ctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttct 12170424  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||| || |||| | ||||||    
T  12170423 cttataaataagatcggatgaagtatt 12170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  23 aatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatagga 113  Q
    ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||| || |||  |||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  114 ccggaggga 122  Q
    | |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 13724221 - 13724102
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    |||||||||||||| || |||  |||||||||||||  |||||| ||| |  | |||||||| ||||||||||||||||||||||| | |  |||||| |    
T  13724221 gtcctatttataagcgatattctggtcaacaaaagttgatgtatctggtccaattttttaaccaaatacatcaacttttgttgacctagatgtctcttgt 13724122  T
Q  106 aaataggaccggagggagta 125  Q
    ||||||||||||||||||||    
T  13724121 aaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31150659 - 31150769
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||| |||||      ||||||||||||   ||||    
T  31150659 ctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca-----atttgttgacccatgtttct 31150753  T
Q  101 cttataaataggaccg 116  Q
    ||||||||||||||||    
T  31150754 cttataaataggaccg 31150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 41453090 - 41453149
Alignment:
Q  26 ttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 85  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 41478645 - 41478773
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41478645 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41478744  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||| ||||||||    
T  41478745 cttataaataggaccggaggtagtatttt 41478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15372350 - 15372224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15372350 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15372251  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||| ||||||||||||    
T  15372250 cttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37990019 - 37990145
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  37990019 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 37990118  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  37990119 cttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3055682 - 3055557
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3055682 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3055583  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  3055582 cttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15896966 - 15896841
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  15896966 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 15896867  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  15896866 cttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 44398810 - 44398685
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44398810 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44398711  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  44398710 cttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13197716 - 13197840
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13197716 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13197815  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  13197816 cttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 23227391 - 23227271
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    ||||||||||||||||| |||| |||||||||||||  |||||||||| |  |||| |||   | ||||||||  ||||||||||| |||  | ||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttat 23227292  T
Q  106 aaataggaccggagggagtat 126  Q
    ||||| |||| ||||||||||    
T  23227291 aaatatgaccagagggagtat 23227271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13724108 - 13724235
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| |||||| || |||||||||||||||  ||||||||||    ||  ||  || | |||||||||||||||||||||  ||  ||     
T  13724108 ctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcg 13724207  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||| | |||||||||||    
T  13724208 cttataaataggactgtagggagtattt 13724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 44397669 - 44397546
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||||    
T  44397669 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 44397570  T
Q  103 tataaataggaccggagggagtat 126  Q
    |||||||||||||||||| |||||    
T  44397569 tataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 4684006 - 4684063
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  4684006 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 16044391 - 16044452
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  16044391 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaattta 16044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 36688892 - 36688977
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    |||||||||||||||||||| || |||||||||| ||  |||||| | | ||||||||| ||| | ||||||||| ||||||||||    
T  36688892 ggtcctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41492902 - 41493015
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  41492902 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 41493001  T
Q  101 cttataaataggac 114  Q
     |||||||||||||    
T  41493002 tttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 37666684 - 37666740
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37666684 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 45294333 - 45294452
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||| | |||| ||||   ||||||||||| |||||||| ||||| | |||||||| |||||| | |||||||||||||| ||| || ||||    
T  45294333 cggtcctatttacaggagacatttcattcaacaaaagttaatgtatt-ggactaattttttaaccaaatactttaacttttgttgacctaaatttttctt 45294431  T
Q  104 ataaataggaccggagggagt 124  Q
    | |||||  |||| |||||||    
T  45294432 aaaaataaaaccgaagggagt 45294452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 23227346 - 23227404
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||| | ||| ||||||    
T  23227346 aaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 23986788 - 23986898
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| |||||||||||||||||||  |||| |||||| ||||| | ||  |  |||||| |||||||||||| || |||||||||| ||||  | |||||    
T  23986788 ggtcatatttataagagaaatttaaatcaataaaagttaatgtttctgatccaaattttgaactaaatacataaagttttgttgactcaaatgtttctta 23986887  T
Q  105 taaataggacc 115  Q
    |||||| ||||    
T  23986888 taaataagacc 23986898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15271060 - 15271173
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| || ||||||||||||| ||||    ||||||||||  |||||| | | || |||||| ||||| |||| | |||||||||| |||||||  |||    
T  15271060 ctccgatcttatttataagagacatttgaagcaacaaaagttgatgtatctagtctaaattttgaactacatactttaacttttgttcacccaaacatct 15271159  T
Q  101 cttataaataggac 114  Q
    ||||||||||||||    
T  15271160 cttataaataggac 15271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 16243790 - 16243907
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || ||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttc 16243889  T
Q  102 ttataaataggaccggag 119  Q
    ||||||||||||||||||    
T  16243890 ttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30852741 - 30852648
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 94  Q
    |||||||||||||||||||||||| |||| | || ||||||  |||||| | |||||||| || ||  | |||||| ||||||||||| |||||    
T  30852741 ctccggtcctatttataagagaaagttagattaataaaagtttatgtatctagactgaatattgaatcagatacataaacttttgttgtcccaa 30852648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 38917528 - 38917653
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| || |    
T  38917528 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttat 38917627  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  38917628 cttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 4553125 - 4553069
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 66  Q
    ||||||||||||||| || ||||||||||| |  ||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaa 4553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6648525 - 6648649
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | || |||||||| ||| ||||    
T  6648525 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttct 6648624  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6648625 cttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9047761 - 9047801
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9047761 ctccggtcctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12337943 - 12337983
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  12337943 ctccggtcctatttataagagaattttgggtcaacaaaagt 12337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 31150709 - 31150653
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||| ||||| |||||    
T  31150709 aaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagta 31150653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 39724284 - 39724344
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    |||| |||||||||||||||||||||   |||||||||  ||||||||| |||||||||||    
T  39724284 aaattcatcaacttttgttgacccaactgtctcttatatttaggaccggtgggagtatttt 39724344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13344608 - 13344481
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| | |||||||||||  |||||| | |    || ||    | ||||||||  | ||||||||||| ||| ||||    
T  13344608 ctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttct 13344509  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||| |||||||| |||||||    
T  13344508 cttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 40714016 - 40714075
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||| | || ||||||||||  |||||| |||| |||||||    
T  40714016 aaatacatcaacttttgttgacctacaagtctcttataagaaggaccagaggcagtattt 40714075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 13775832 - 13775862
Alignment:
Q  97 ttctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||||||    
T  13775832 ttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 36089457 - 36089559
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| |||||||||||||||||| || |||| ||     || ||| ||||| |||||||||||||| || || ||||  |||||| ||||    
T  36089457 ctatttataagagatatttaggtcaacaaaagttaacgtatctgattcaaaatttaaactagatacatcaacttttattaactcaaatatctcttctaaa 36089556  T
Q  109 tag 111  Q
    |||    
T  36089557 tag 36089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 7765821 - 7765788
Alignment:
Q  97 ttctcttataaataggaccggagggagtatttta 130  Q
    ||||||| ||||||||||||||||||||||||||    
T  7765821 ttctcttgtaaataggaccggagggagtatttta 7765788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 20900678 - 20900794
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| |||| ||||| |||||||  |||||| | | |  |||||| ||| | |||| |||| ||||||||||| ||   |||||| ||||    
T  20900678 ctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgttgacctaactatctcttgtaaa 20900777  T
Q  109 taggaccggagggagtat 126  Q
    ||||| ||||||||||||    
T  20900778 tagga-cggagggagtat 20900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 30852719 - 30852748
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  30852719 ttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 42263497 - 42263468
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  42263497 ttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 12170473 - 12170529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||||||| |||||| ||  ||||||| ||||||||| |||||||||||    
T  12170473 aaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16044323 - 16044363
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  16044323 ctccggtcctatttataagagaattttgggtcaactaaagt 16044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 20900718 - 20900678
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaatag 111  Q
    ||||||||||||||| |||||||||  ||||||||||||||    
T  20900718 atacatcaacttttgctgacccaaatgtctcttataaatag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30099188 - 30099228
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  30099188 ctccggtcctatttattagagaattttgggtcaacaaaagt 30099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggacc 115  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37666616 - 37666656
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||||| |||||    
T  37666616 ctccggtcctatttataagagaattttgggtcaactaaagt 37666656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44804584 - 44804624
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  44804584 ctccggtcctatttataagagaattttaagttaacaaaagt 44804624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 49511 - 49635
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49511 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 49610  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  49611 cttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 49629 - 49499
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49629 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49530  T
Q  101 cttataaataggaccggagggagtattttac 131  Q
    |||||||||||||||||||| ||||||||||    
T  49529 cttataaataggaccggaggtagtattttac 49499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 8e-64; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10297985 - 10298112
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10297985 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 10298084  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  10298085 cttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40691120 - 40690986
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 40691021  T
Q  101 cttataaataggaccggagggagtattttacaaga 135  Q
    |||||||||||||||||||||||||||||| ||||    
T  40691020 cttataaataggaccggagggagtattttataaga 40690986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17653718 - 17653847
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17653718 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 17653817  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||| |||||||||    
T  17653818 cttataaataggaccggaggtagtatttta 17653847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 49823505 - 49823380
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49823505 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 49823406  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  49823405 cttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19557176 - 19557052
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19557176 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 19557077  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  19557076 cttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22721937 - 22722062
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22721937 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 22722036  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||| |||||||    
T  22722037 cttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37508927 - 37509052
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37508927 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37509026  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  37509027 cttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2787956 - 2787832
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 2787857  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  2787856 cttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34080154 - 34080030
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  34080154 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattct 34080055  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  34080054 cttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 48340403 - 48340527
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48340403 ctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 48340502  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  48340503 cttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 8817507 - 8817384
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8817507 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 8817408  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||| ||||||||    
T  8817407 ataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4238600 - 4238725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  4238600 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 4238699  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4238700 cttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8437431 - 8437556
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  8437431 ctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattct 8437530  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  8437531 cttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 44785520 - 44785391
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44785520 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44785421  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    ||||||||||| |||||||| |||| ||||    
T  44785420 cttataaatagaaccggaggaagtagttta 44785391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 46208036 - 46208161
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  46208036 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattct 46208135  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  46208136 cttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 51406679 - 51406804
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  51406679 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 51406778  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  51406779 cttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21295450 - 21295326
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  21295450 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaaaattct 21295351  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  21295350 cttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38964398 - 38964522
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38964398 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 38964497  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  38964498 cttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 9111615 - 9111497
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9111615 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 9111516  T
Q  104 ataaataggaccggaggga 122  Q
    |||||||||||||||||||    
T  9111515 ataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42507479 - 42507358
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  42507479 ctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattct 42507380  T
Q  101 cttataaataggaccggaggga 122  Q
    ||||||||||||||||||||||    
T  42507379 cttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36095804 - 36095676
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36095804 ctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 36095705  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    ||| |||||| |||||||| |||||||||    
T  36095704 cttgtaaataagaccggagtgagtatttt 36095676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6013460 - 6013336
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  6013460 ctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattct 6013361  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6013360 cttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42170470 - 42170346
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  42170470 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattct 42170371  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||||| || ||||||    
T  42170370 cttataaataggaccagatggagta 42170346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 35513482 - 35513603
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||| ||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattctttt 35513581  T
Q  104 ataaataggaccggagggagta 125  Q
    |||||||||| |||||||||||    
T  35513582 ataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 33943055 - 33942931
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  33943055 tccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctc 33942956  T
Q  102 ttataaataggaccggagggagtat 126  Q
    |||||||||||| ||| | ||||||    
T  33942955 ttataaataggatcggcgagagtat 33942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 9213522 - 9213646
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| ||| ||||  ||||||||||||  |||||| |||||| | ||| |||| ||||||||||| ||||||||||| ||| ||||    
T  9213522 ctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttct 9213621  T
Q  101 cttataaataggaccggagggagta 125  Q
    || ||||||||||| ||||||||||    
T  9213622 ctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 5323214 - 5323337
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctc 101  Q
    ||||||||||||| || ||||| ||  ||||||||||   |||||||||| | ||||||||| ||| ||||||||||||||||||||||||||| ||  |    
T  5323214 ccggtcctatttacaaaagaaaattgagtcaacaaaaaataatgtatttgaattgaattttttaaccaaatacatcaacttttgttgacccaaattttac 5323313  T
Q  102 ttataaataggaccggagggagta 125  Q
    |||||||||| | |||||||||||    
T  5323314 ttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 34988084 - 34988205
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||| ||||| |||| |||||||||||||  || ||| ||| |    |||||||||| ||||||||||| |||||||| ||||  | ||||    
T  34988084 cggtcctatttattagagacatttgggtcaacaaaagttgatctatctggtccacttttttaactagatacatcaactattgttgactcaaatatttctt 34988183  T
Q  104 ataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||    
T  34988184 ataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 9027196 - 9027139
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46208154 - 46208029
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46208154 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46208055  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  46208054 cttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9213640 - 9213512
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| ||||||||||| |||||||||||||||||||||| |  ||||||||||    ||  ||   | | ||||||||||||||||||||  |||  |||    
T  9213640 ctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtct 9213541  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
     ||||||||||||||||||||||||||||    
T  9213540 tttataaataggaccggagggagtatttt 9213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17653836 - 17653712
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  17653836 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 17653737  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  17653736 cttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37509045 - 37508921
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  37509045 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 37508946  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  37508945 cttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21295332 - 21295458
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa-ctaaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| |  | | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  21295332 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatcta-attaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21295430  T
Q  100 tcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||| ||||||    
T  21295431 tcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 26019595 - 26019477
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||| || ||| |||||| || ||||||| | |||| |||||| ||| | |||||| |||||| ||||||| ||  ||||||||||||    
T  26019595 ctatttataagagaaagttgggttaacaaa-gttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaaattttctcttataaa 26019497  T
Q  109 taggaccggagggagtattt 128  Q
    ||||| |||| |||||||||    
T  26019496 taggatcggaaggagtattt 26019477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4238718 - 4238592
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  4238718 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 4238619  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  4238618 cttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 34080036 - 34080162
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  34080036 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 34080135  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  34080136 cttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19557058 - 19557183
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  19557058 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 19557157  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  19557158 cttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 22722054 - 22721929
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  102 ttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||| ||||||    
T  22721954 ttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 43323072 - 43323145
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaac 80  Q
    |||||||||||||| ||| || |||||||||||||  ||||||||||| | |||||||||| ||||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaac 43323145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49823387 - 49823512
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  49823387 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 49823486  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  49823487 cttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10298103 - 10297979
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  10298103 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 10298004  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  10298003 cttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 8817393 - 8817520
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| |||||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  102 ttataaataggaccggagggagtatttt 129  Q
    ||||||||||||||| ||| ||||||||    
T  8817493 ttataaataggaccgaaggtagtatttt 8817520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 44785470 - 44785529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  44785470 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 2131748 - 2131802
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 8952009 - 8951943
Alignment:
Q  12 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 78  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| ||||||||||    
T  8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaatacatca 8951943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 29285873 - 29285790
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 95  Q
    ||||||||||| |||||||||||||||||||||||  ||| ||  || |||||| ||||| |||||| |||||||||||| |||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaa--tatctgatctaaattttgaactacatacataaacttttgttgatccaaa 29285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38964516 - 38964390
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  38964516 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 38964417  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  38964416 cttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 42170356 - 42170478
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||||||||  ||||||||||||| ||| ||||||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctctta 42170455  T
Q  105 taaataggaccggagggagtatt 127  Q
    |||||| ||||||||| ||||||    
T  42170456 taaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42507361 - 42507487
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42507361 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 42507460  T
Q  101 cttataaataggaccggagggagtatt 127  Q
     ||||||||||||||||||| ||||||    
T  42507461 attataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 8092595 - 8092684
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||||||||||||||||||| ||   ||||| |||||  |||||| | |||| |||||||||| | |||||||||||| ||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgacc 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33128212 - 33128261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 50  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  33128212 ctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 36095754 - 36095811
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  36095754 aaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9111500 - 9111627
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  9111500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  100 tcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||| ||| |||||||    
T  9111599 tcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 30443762 - 30443858
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||| ||||||||||| ||  ||| | ||| ||||||||||||||| ||||||| |    |||||| |||| ||||||||||||||||    
T  30443762 ggtcaacaaaagttaatgtatttggtctatattatgaaccaaatacatcaactttagttgaccaatttgtctcttgtaaaaaggaccggagggagta 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 33128319 - 33128205
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||| ||||| ||||||||||||  || ||| ||| |  |||||| |||  ||||||| |||||||||||||| ||| ||||||||||| |    
T  33128319 tatttataagagacatttaagtcaacaaaagttgat-tatctggtcc-aattttaaaccgaatacattaacttttgttgacctaaatttctcttataatt 33128222  T
Q  110 aggaccggagggagtat 126  Q
    ||||| |||| ||||||    
T  33128221 aggactggagagagtat 33128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 35513529 - 35513473
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  35513529 aaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 48340521 - 48340397
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48340521 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48340422  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||| |||||||||||||||| ||||    
T  48340421 cttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 34988125 - 34988074
Alignment:
Q  75 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||  ||||| ||||||||||||| |||||||||    
T  34988125 atcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 2787906 - 2787956
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  2787906 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8437549 - 8437423
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||    | ||||||||  |||||| |||||| ||| ||||    
T  8437549 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttct 8437450  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  8437449 cttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40691002 - 40691120
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||| ||| ||| ||||    
T  40691002 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttct 40691101  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  40691102 cttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6013342 - 6013463
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| ||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6013342 ctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6013441  T
Q  101 cttataaataggaccggaggga 122  Q
    ||||||||| |||| |||||||    
T  6013442 cttataaattggactggaggga 6013463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 45652128 - 45652067
Alignment:
Q  66 actaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||| ||||||| | |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 43323116 - 43323072
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaatagga 113  Q
    ||||||||||||||||||||||||||  || ||||||||||||||    
T  43323116 aaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 51406797 - 51406673
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  51406797 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 51406698  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||| ||||||||| ||||    
T  51406697 cttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 26001184 - 26001141
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgta 48  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  26001184 ggtcatatttataagagaaatttaagtcaacaaaagttaatgta 26001141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2131796 - 2131702
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaa 95  Q
    ||||||||||| |||| ||||| |||| |||||||||||||  |||||| ||| || ||||||  || |  ||||  ||||||||||||||||||    
T  2131796 ctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatctggtctaaattttgcaccaggtacagtaacttttgttgacccaaa 2131702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 33943006 - 33943063
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||| |||||||||||||| ||  |||| |||||||||||| |||| |||||||    
T  33943006 aaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagtat 33943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2787838 - 2787878
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  2787838 ctccggtcctatttataagagaattttgggtcagcaaaagt 2787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9027148 - 9027188
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  9027148 ctccggtcctatttataagataaagttgggtcaacaaaagt 9027188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 34381529 - 34381465
Alignment:
Q  63 ttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||| ||||||||| ||||||||||  |   || |||||||||||| |||||||||||||||    
T  34381529 ttaactagatacatcaatttttgttgacaaatttttttcttataaatagaaccggagggagtatt 34381465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 40215022 - 40215050
Alignment:
Q  98 tctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||||    
T  40215022 tctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44785402 - 44785442
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  44785402 ctccggttctatttataagagaattttgggtcaacaaaagt 44785442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7785902 - 7785776
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7785902 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 7785803  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7785802 cttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54736 - 54611
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54736 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 54637  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  54636 cttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2890286 - 2890161
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2890286 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 2890187  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  2890186 cttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32114599 - 32114466
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |    
T  32114599 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaatttt 32114500  T
Q  101 cttataaataggaccggagggagtattttacaag 134  Q
    ||||||||||||||||||||||||||||||||||    
T  32114499 cttataaataggaccggagggagtattttacaag 32114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6552661 - 6552785
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6552661 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6552760  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6552761 cttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 39571327 - 39571200
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39571327 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 39571228  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  39571227 cttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7805823 - 7805697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  7805823 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 7805724  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7805723 cttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44498311 - 44498185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  44498311 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 44498212  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  44498211 cttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43199478 - 43199353
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  43199478 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 43199379  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  43199378 cttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 3304402 - 3304278
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  3304402 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 3304303  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  3304302 cttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12763778 - 12763650
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  12763778 ctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattat 12763679  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  12763678 cttataaataggaccggagggagtatttt 12763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32211487 - 32211360
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32211487 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 32211388  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  32211387 cttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 25601124 - 25600999
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  25601124 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattct 25601025  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  25601024 cttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15888476 - 15888348
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15888476 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 15888377  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    ||||||||||| || ||||||||||||||    
T  15888376 cttataaatagaactggagggagtatttt 15888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31654619 - 31654743
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31654619 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31654718  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||||||||||||||||| ||||    
T  31654719 tttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 33289385 - 33289261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33289385 ctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 33289286  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  33289285 cttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12343264 - 12343146
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  12343264 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 12343165  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  12343164 cttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7012177 - 7012305
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7012177 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 7012276  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||| ||||||||    
T  7012277 cttataaataggaccggaggaagtatttt 7012305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 13578871 - 13578988
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13578871 ctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaa 13578970  T
Q  109 taggaccggagggagtat 126  Q
    || ||| ||| |||||||    
T  13578971 tatgactggatggagtat 13578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 8587176 - 8587301
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||| |||| |||||||||||| |||||||||||||| ||||| |||  ||||    
T  8587176 ctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttct 8587275  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| ||||||||| |||||    
T  8587276 cttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 28463617 - 28463742
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||| ||| | ||| ||||||||| | |||||||| |||||    
T  28463617 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattct 28463716  T
Q  101 cttataaataggaccggagggagtat 126  Q
       |||||||||| ||||||||||||    
T  28463717 gcaataaataggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27422199 - 27422322
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| ||  ||||||||   |  |||||||||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  27422199 ctccggtcctatttataagataaagttgagtcaacaa---ttcatgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttct 27422295  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||| ||||||||||    
T  27422296 cttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4245705 - 4245649
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245705 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 24692096 - 24691986
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || |||||||||| ||| | ||| ||||||||||||||||||||| |||| ||| |    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt-aaccagatatatcaacttttgttgacccaaatttcttttaaa 24691998  T
Q  107 aataggaccgga 118  Q
    ||||||||||||    
T  24691997 aataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17006917 - 17007026
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17006917 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17007016  T
Q  101 cttataaata 110  Q
    ||||||||||    
T  17007017 cttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17570330 - 17570221
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||  | |||||||||||||| |||||  ||| ||||    
T  17570330 ctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttct 17570231  T
Q  101 cttataaata 110  Q
    ||||||||||    
T  17570230 cttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33057600 - 33057725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| || | ||||||||| |   |||||  ||| |||| ||||||| | ||||||||| ||||||||||| ||  ||||    
T  33057600 ctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaaactttct 33057699  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| ||||||| |||||||    
T  33057700 cttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 8587226 - 8587170
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  8587226 aaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 28463667 - 28463616
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28463667 aaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 54618 - 54744
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  54618 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 54717  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  54718 cttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2890168 - 2890294
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  2890168 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 2890267  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  2890268 cttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7785784 - 7785910
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7785784 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7785883  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  7785884 cttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25601006 - 25601131
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  25601006 ctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 25601105  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| |||||| |||||    
T  25601106 cttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 43199360 - 43199485
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43199360 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 43199459  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  43199460 cttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 4245655 - 4245715
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  4245655 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 4245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6552779 - 6552655
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6552779 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6552680  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6552679 cttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 13246889 - 13246801
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||||  |||||| |||||||||||||||   ||||||||  | ||||||||| ||||| ||||||||||||||||| ||||    
T  13246889 gtcaacaaaagttcatgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31654737 - 31654613
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31654737 ctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31654638  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  31654637 cttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 7805773 - 7805831
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7805773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 27422311 - 27422266
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  27422311 cggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 3304352 - 3304408
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3304352 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 15888426 - 15888482
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15888426 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 17006962 - 17006914
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 17570285 - 17570333
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  72 tacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 32114549 - 32114605
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32114549 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39571209 - 39571333
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  39571209 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 39571308  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  39571309 cttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 44498261 - 44498317
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44498261 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 13246801 - 13246851
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 52  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 15688084 - 15688038
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 117  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 24203091 - 24202989
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||   | |||||| ||| ||||||||||||  || |||||| |||  | |||||||    
T  24203091 tcctatttataagagaaatttatgtcaataaaagtggatatatttgatttaaattttgaaccaaatacatcaaccattattgaccaaaatatttcttata 24202992  T
Q  107 aat 109  Q
    |||    
T  24202991 aat 24202989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33289267 - 33289393
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  |||| |||||| | ||| ||||    
T  33289267 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttct 33289366  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  33289367 cttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 12763728 - 12763785
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  12763728 aaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 24692054 - 24692111
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||| ||  || |||||||||||||| || |||||||||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtattt 24692111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 32211449 - 32211494
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 28999163 - 28999083
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    ||||||||| ||||| || ||||||||||| |  |||||| | ||||||||||||||||| |||| | ||||||| |||||    
T  28999163 tatttataaaagaaagtttggtcaacaaaaattgatgtatctagactgaatttttaactacatacgtaaacttttattgac 28999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 33057648 - 33057592
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||| ||| ||||||||| ||||  || ||||||||||||||||||||||||||||    
T  33057648 atacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||||| ||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 7012217 - 7012171
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012217 acttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32211369 - 32211407
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  32211369 ctccggtcctatttataagagaattttgggtcaacaaaa 32211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3304284 - 3304324
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  3304284 ctccggtcctatttataagaaaattttgggtcaacaaaagt 3304324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7012295 - 7012255
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  7012295 ctccggtcctatttataagagaattttggatcaacaaaagt 7012255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7805705 - 7805745
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| ||||| |||||||    
T  7805705 ctccggtcctatttataagagaattttgggtcagcaaaagt 7805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12763660 - 12763700
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  12763660 ctccggtcctatttataagataattttgggtcaacaaaagt 12763700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 41915620 - 41915592
Alignment:
Q  98 tctcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||||    
T  41915620 tctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 43332592 - 43332556
Alignment:
Q  92 caaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  43332592 caaaattttcttataaataggaccggatggagtattt 43332556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44498193 - 44498233
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  44498193 ctccggtcctatttataagagaattttgggtcaataaaagt 44498233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1738571 - 1738445
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1738571 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 1738472  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  1738471 cttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7240755 - 7240881
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7240755 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 7240854  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7240855 cttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 46840866 - 46840990
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46840866 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 46840965  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  46840966 cttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7482231 - 7482357
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7482231 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattct 7482330  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  7482331 cttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 38064037 - 38063911
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38064037 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 38063938  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||||| |||||||||||    
T  38063937 cttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 9268766 - 9268887
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9268766 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctta 9268865  T
Q  105 taaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||    
T  9268866 taaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22285705 - 22285829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  22285705 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 22285804  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  22285805 cttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23314263 - 23314139
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  23314263 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattct 23314164  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  23314163 cttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31319523 - 31319399
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31319523 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31319424  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||||||||    
T  31319423 cttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36583401 - 36583527
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36583401 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattct 36583500  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||    
T  36583501 cttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1565853 - 1565728
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1565853 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 1565754  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||| |||| |||||||||    
T  1565753 cttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 94442 - 94318
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattct 94343  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||| |||||||||||    
T  94342 cttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28536875 - 28536750
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||    
T  28536875 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaaaattct 28536776  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  28536775 cttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36016320 - 36016196
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  36016320 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 36016221  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||||| || ||||||    
T  36016220 cttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38441466 - 38441590
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  38441466 ctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattct 38441565  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  38441566 cttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4790254 - 4790379
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  4790254 ctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaaaattct 4790353  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4790354 cttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  11 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  111 ggaccggag 119  Q
    |||||||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40840243 - 40840126
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||| |||||||| ||| || ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||    
T  40840243 ctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttct 40840144  T
Q  101 cttataaataggaccgga 118  Q
    ||||||||||||||||||    
T  40840143 cttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 9575419 - 9575539
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||||||||| ||||||||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||| ||||||||||| ||  ||||||||    
T  9575419 ggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctctta 9575518  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||| ||||||||    
T  9575519 taaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7269529 - 7269412
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||| ||| || ||||||||||| |  |||||| |  |||||||||||||| | || |||||||||||||| ||||||  ||||    
T  7269529 ctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttct 7269430  T
Q  101 cttataaataggaccgga 118  Q
    ||||||||||||||||||    
T  7269429 cttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 7661088 - 7661207
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||||||| ||||| ||||||  |||||  |||    ||  ||  |||| |||||||||||||||||||||||||  |||| ||||    
T  7661088 tcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgacccaaatgtctcatata 7661187  T
Q  107 aataggaccggagggagtat 126  Q
    ||||||||| ||||||||||    
T  7661188 aataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 46840984 - 46840857
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  46840984 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 46840885  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||| |||||||    
T  46840884 cttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 1738453 - 1738579
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  1738453 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 1738552  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  1738553 cttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7240873 - 7240747
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  7240873 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 7240774  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  7240773 cttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22285823 - 22285697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  22285823 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 22285724  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  22285723 cttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 36016270 - 36016326
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36016270 aaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 1565803 - 1565862
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1565803 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 94324 - 94442
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || || |  | ||||||||  ||||||||||||| ||| ||||    
T  94324 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttct 94423  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  94424 cttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7482349 - 7482224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||| ||| |||    
T  7482349 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacctaaatttc 7482251  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||| |||||    
T  7482250 tcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9268880 - 9268754
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9268880 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9268781  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||||| |||| ||||||    
T  9268780 cttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 7661196 - 7661075
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||| |||| |||| |||||||||||||  |||||| | | |  | ||||| || |  ||||||||||||| |||||  ||| ||||||||    
T  7661196 ggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttctctta 7661097  T
Q  105 taaataggaccggagggagtat 126  Q
    ||||||||| || |||||||||    
T  7661096 taaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 9575467 - 9575406
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    |||||||| | |||||||||||||||||  |||||||| |||||||||| ||||||||||||    
T  9575467 ctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 28536825 - 28536882
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  28536825 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 38063987 - 38064044
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38063987 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 23314213 - 23314269
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314213 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 31319473 - 31319529
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31319473 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36583519 - 36583395
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36583519 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttct 36583420  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  36583419 cttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 7269481 - 7269535
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||||||||||||||    
T  7269481 atacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 24710743 - 24710801
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||    ||| ||||||| ||||||||||||||||||    
T  24710743 aaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagtatt 24710801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4790372 - 4790247
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || |||   | ||||||||  | ||||||||||| ||| || |    
T  4790372 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaattttt 4790273  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  4790272 cttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 38441584 - 38441460
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact-aaatacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |  | ||  || |  | ||||||||  ||||||||||||  ||| |||    
T  38441584 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt-taaaaattcagttcaaatacattcacttttgttgacataaatttc 38441486  T
Q  100 tcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||| ||||    
T  38441485 tcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 46877666 - 46877719
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    |||||| |||||||||||||||||  |||||||||| ||||||||||| |||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23314145 - 23314185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  23314145 ctccggtcctatttataagagaattttgggtcaacaaaagt 23314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 29993291 - 29993251
Alignment:
Q  78 aacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  29993291 aacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33418500 - 33418460
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagt 33418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 40840126 - 40840165
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagt 40840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 46877713 - 46877666
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||| ||||||||||| || ||||||||||||| |||||||    
T  46877713 tccggtcctatatataagagaaagttgggtcaacaaaagttaatgtat 46877666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 28677341 - 28677311
Alignment:
Q  100 tcttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||||||||||||||    
T  28677341 tcttataaataggaccggagggagtatttta 28677311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 5347750 - 5347721
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  5347750 ttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31319405 - 31319445
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  31319405 ctccggttctatttataagagaattttgggtcaacaaaagt 31319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36016206 - 36016242
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagt 36016242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 38063923 - 38063959
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  38063923 ggtcctatttataagagaattttgggtcaacaaaagt 38063959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26602329 - 26602455
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26602329 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 26602428  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  26602429 cttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6330121 - 6330246
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6330121 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6330220  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  6330221 cttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11572269 - 11572144
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11572269 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11572170  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  11572169 cttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2830341 - 2830465
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2830341 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 2830440  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  2830441 cttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 8099536 - 8099664
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  8099536 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 8099635  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  8099636 cttataaataggaccggagggagtatttt 8099664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8383093 - 8382969
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8383093 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 8382994  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  8382993 cttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 13853714 - 13853592
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13853714 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctt 13853615  T
Q  104 ataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||    
T  13853614 ataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9644702 - 9644829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9644702 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9644801  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  9644802 cttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9650719 - 9650846
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9650719 ctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9650818  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  9650819 cttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 33052918 - 33052791
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33052918 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 33052819  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||| |||||||||    
T  33052818 cttataaataggaccggatggagtattt 33052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 35031125 - 35031000
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  35031125 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 35031026  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  35031025 cttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6068572 - 6068697
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||    
T  6068572 ctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattct 6068671  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  6068672 cttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 8417913 - 8417793
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8417913 ggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctctta 8417814  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||| ||||||||    
T  8417813 taaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6143560 - 6143684
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  6143560 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattct 6143659  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||| ||||||    
T  6143660 cttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 28747248 - 28747133
Alignment:
Q  11 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  111 ggaccggagggagtat 126  Q
    |||| | |||||||||    
T  28747148 ggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 17992018 - 17992118
Alignment:
Q  25 tttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagt 124  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagt 17992117  T
Q  125 a 125  Q
    |    
T  17992118 a 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22896477 - 22896593
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  22896477 ctccggtcctatttataagagaagtttaggtcaaca---------gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattct 22896567  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  22896568 cttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13043764 - 13043850
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 87  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||||||||    
T  13043764 ctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 3788048 - 3788168
Alignment:
Q  7 tcctatttataagagaaatttaggtcaa-caaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttat 105  Q
    |||||||||||||||||| || |||||| ||||| |   || || ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||    
T  3788048 tcctatttataagagaaagttgggtcaatcaaaatttgttggatgtggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttat 3788147  T
Q  106 aaataggaccggagggagtat 126  Q
    ||||| |||||||||||||||    
T  3788148 aaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 7597092 - 7596972
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||| ||  || |||||||||  ||||||  | ||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  7597092 tatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaat 7596993  T
Q  110 aggaccggagggagtatttta 130  Q
    ||||  |||||||||| ||||    
T  7596992 aggattggagggagtacttta 7596972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 6069062 - 6068974
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||||| || |||||||||||  |||| ||| ||||||||||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacc 6068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 14936577 - 14936456
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||||||||||||||||| |||| ||||||||| |||  |||||||||||   |||| ||||||| |||||||| |||||||||||| |||  | ||||     
T  14936577 ggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtttcttc 14936478  T
Q  105 taaataggaccggagggagtat 126  Q
    || |||||||| ||||||||||    
T  14936477 tatataggaccagagggagtat 14936456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 8099654 - 8099529
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| ||||    
T  8099654 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttct 8099555  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  8099554 cttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8382975 - 8383101
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  8382975 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 8383074  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  8383075 cttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2830459 - 2830334
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  2830459 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 2830360  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  2830359 cttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11572151 - 11572276
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11572151 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11572250  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  11572251 cttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6330239 - 6330115
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  6330239 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 6330140  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6330139 cttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    |||||||||||||||||||||||||||| ||||||||| ||   || |||  |||| ||||||||||||||||| ||| |||  |||||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtattt-gatgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26602447 - 26602323
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  26602447 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 26602348  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  26602347 cttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 8417802 - 8417925
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||||||| ||| |||||||    
T  8417802 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctctt 8417901  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||| |||| |||||||||||    
T  8417902 ataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 8186443 - 8186497
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13853599 - 13853725
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13853599 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13853698  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||| ||| ||||||    
T  13853699 cttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 14936531 - 14936589
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||| |||||| ||||    
T  14936531 aaatacatcaactattgttgacccaaatatctcttataaataggaccagagggattatt 14936589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 33052868 - 33052926
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  33052868 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3788161 - 3788111
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 51  Q
    |||||||| ||||||||||| ||||||||||||||||||||  ||||||||    
T  3788161 ctccggtcttatttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6068690 - 6068564
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||  ||||||||||||  |||||| | |    || ||  | | ||||||||  |||||| |||||| ||| || |    
T  6068690 ctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaattttt 6068591  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  6068590 cttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 8186489 - 8186366
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    |||||||||||||||| |||||||| | |||||||||||  |||||| ||  |  ||||   ||  |||||||||||||||| ||||||||||  |||||    
T  8186489 ccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatctgatccaaattg--aatcaaatacatcaacttttattgacccaaatgtctct 8186392  T
Q  103 tataaataggaccggagggagtattt 128  Q
    | || |||||| |||||| |||||||    
T  8186391 tgtatataggagcggaggaagtattt 8186366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 31849636 - 31849586
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  31849636 aaatacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 6143610 - 6143553
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  6143610 aaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 35031075 - 35031132
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| || ||||||||||||||||||||| |||||    
T  35031075 aaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9644820 - 9644780
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9644820 ctccggtcctatttataagagaattttgggtcaacaaaagt 9644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9650837 - 9650797
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  9650837 ctccggtcctatttataagagaattttgggtcaacaaaagt 9650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 5685368 - 5685470
Alignment:
Q  24 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggag 123  Q
    |||| |||||||||||||  ||||||||||||  |||| ||||| |  |||||||  ||||| |||||||||  | ||||||||||| |||| || ||||    
T  5685368 atttgggtcaacaaaagttgatgtatttggaccaaattattaacaagttacatcatattttgctgacccaaatgtttcttataaataagaccagatggag 5685467  T
Q  124 tat 126  Q
    |||    
T  5685468 tat 5685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35031007 - 35031045
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  35031007 ctccggtcctatttataagagaattttgggtcaacaaaa 35031045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 3421693 - 3421588
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||| ||||||| |||| ||  ||||||||||||  || ||| | || ||| |||||||  | ||| |||||||||||||||| |||| || |||||    
T  3421693 ggtcctacttataagtgaaagttgagtcaacaaaagttgatatatctagattgattttttaataagatatatcaacttttgttgactcaaatttttctta 3421594  T
Q  105 taaata 110  Q
    ||||||    
T  3421593 taaata 3421588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 9644737 - 9644696
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  9644737 tgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 9650754 - 9650713
Alignment:
Q  84 tgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  9650754 tgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 12473651 - 12473684
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||||||||| ||||    
T  12473651 gtcctatttataagagaaatttaggtcaataaaa 12473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 6069014 - 6069062
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgg 117  Q
    |||||||| |||||||||||||| |||  ||| ||||||||||||||||    
T  6069014 aaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 13043802 - 13043758
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||| ||||| |||||||||||||| ||||| |||| ||||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 33859611 - 33859643
Alignment:
Q  97 ttctcttataaataggaccggagggagtatttt 129  Q
    ||||||| |||||||||||||||||||||||||    
T  33859611 ttctcttgtaaataggaccggagggagtatttt 33859643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9395356 - 9395482
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9395356 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9395455  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  9395456 cttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41989531 - 41989403
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41989531 ctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 41989432  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  41989431 cttataaataggaccggagggagtatttt 41989403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13103030 - 13103156
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13103030 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13103129  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  13103130 cttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36563662 - 36563537
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36563662 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 36563563  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  36563562 cttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37149079 - 37148955
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37149079 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 37148980  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||||||||||||||||||||||    
T  37148979 attataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13033057 - 13033183
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13033057 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattct 13033156  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| |||||||||||||    
T  13033157 cttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 11795174 - 11795299
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11795174 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11795273  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||| |||||||||||    
T  11795274 cttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 23359952 - 23360072
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23359952 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctctta 23360051  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||||||| ||||    
T  23360052 taaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17025630 - 17025755
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  17025630 ctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaattct 17025729  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  17025730 cttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20848080 - 20848203
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  20848080 ctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaattct 20848178  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  20848179 cttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26350474 - 26350348
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||    
T  26350474 ctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattct 26350375  T
Q  101 cttataaataggaccggagggagtatt 127  Q
     ||||||||||||||||||||||||||    
T  26350374 tttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37641959 - 37642085
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattc 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  37641959 ctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattc 37642058  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||    
T  37642059 tcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 582995 - 583118
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  582995 ctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 583094  T
Q  101 cttataaataggaccggagggagta 125  Q
     ||||  |||||| |||||||||||    
T  583095 tttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21575970 - 21576077
Alignment:
Q  19 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccgga 21576069  T
Q  119 gggagtat 126  Q
    ||||||||    
T  21576070 gggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 4443969 - 4444087
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctctt 4444068  T
Q  104 ataaataggaccggaggga 122  Q
    ||||||| |||||||||||    
T  4444069 ataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  16 taagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggacc 115  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  116 ggagggagta 125  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38361815 - 38361750
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 66  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38361815 ctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaa 38361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 3549663 - 3549553
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||| ||||  |||||||||| | ||||||| ||| || ||||||||||  |||||||||||||||||| |   ||| ||||||||||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttataaa 3549564  T
Q  109 taggaccggag 119  Q
    |||||||||||    
T  3549563 taggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 2366444 - 2366352
Alignment:
Q  19 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaatag 111  Q
    |||||| || ||| || ||||||  |||||||||||||||| ||||||| |||||||| |||| ||||||||||||| |||||||||||||||    
T  2366444 gagaaagtttggttaataaaagttgatgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 13539986 - 13539909
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttt 83  Q
    |||||||||||||||||||||||||||||||||||||    |||  |||| ||||||||||||||||| |||||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatcaacttt 13539909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 966157 - 966280
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||| |||||||| ||   ||||||| |||  |||||| | ||||||||||||||| | ||||||  | ||||||||| ||||| |||||||    
T  966157 cggtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctctt 966256  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||| |||||| |||||    
T  966257 ataaataggactggagggggtatt 966280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 17025748 - 17025619
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||     |||||||||  |||||||| |||| ||| ||||    
T  17025748 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttct 17025649  T
Q  101 cttataaataggaccggagggagtatttta 130  Q
    |||||||||||||||||||| |||||||||    
T  17025648 cttataaataggaccggaggtagtatttta 17025619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9395474 - 9395350
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9395474 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9395375  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  9395374 cttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 35904448 - 35904529
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||  ||  |||||| ||||||| ||||| || |||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagtatt 35904529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2629668 - 2629561
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| | ||||||||| | |||||||||||||||||| ||||||| ||  || | |||||||||| ||||||||| |||| ||||| ||||  | |    
T  2629668 ctccggtcttgtttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgttt 2629569  T
Q  101 cttataaa 108  Q
    ||||||||    
T  2629568 cttataaa 2629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 4444018 - 4443955
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||  ||||||||||||| ||| |||||||||||||||||||| ||| |||||||||    
T  4444018 ctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtatttta 4443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36563544 - 36563671
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  36563544 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 36563643  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||| |||||| |||||||    
T  36563644 cttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39290781 - 39290891
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||| |||||||||  | |||||||||||| |  ||||||||||| | ||||||||| || |||||| ||||||||||||  | |  ||||    
T  39290781 ctccggtcctatt-ataagagaatatcaggtcaacaaaaattgatgtatttggattaaatttttaattagatacattaacttttgttgattcgactttct 39290879  T
Q  101 cttataaatagg 112  Q
    ||||||||||||    
T  39290880 cttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 37149029 - 37149087
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37149029 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 13033107 - 13033050
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13033107 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13103148 - 13103023
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |      || ||    | ||||||||  ||||||||||||| ||| ||||    
T  13103148 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 13103049  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  13103048 cttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 23360066 - 23359941
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  23360066 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 23359967  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||| |||| |||||    
T  23359966 cttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 36595886 - 36595782
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||  || | |||||||||   ||||||| | ||||||||||||||  | ||||||||| ||||||||||| ||  |||||||||||||    
T  36595886 tatttataagagaatatttgatcaacaaaa---aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaat 36595790  T
Q  110 aggaccgg 117  Q
    | ||||||    
T  36595789 aagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41989413 - 41989538
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  41989413 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 41989512  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||| ||||||||||||||| |||||    
T  41989513 cttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 26350424 - 26350480
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  26350424 aaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 40138906 - 40138806
Alignment:
Q  10 tatttataagagaaatttag-gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    |||||||||||||||  | | |||||||||| | ||| |||||| |||||||||||||  |||||||||||||||| || ||||||  |||| |||||||    
T  40138906 tatttataagagaaaagttgagtcaacaaaaataaatatatttgaactgaatttttaatcaaatacatcaacttttattaacccaattttcttttataaa 40138807  T
Q  109 t 109  Q
    |    
T  40138806 t 40138806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 583045 - 582987
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||| ||||||    
T  583045 aaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11574204 - 11574166
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11574204 ctccggtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 20848130 - 20848072
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  |||||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  20848130 aaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18167334 - 18167435
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||| |||||||||| |||| ||||||||| |  |||||| |||| | |||||||||  |||||| |||| ||||||||||| ||  || ||||||||||    
T  18167334 tattaataagagaaagttagatcaacaaaaattgatgtatatggatttaatttttaatcaaatacgtcaatttttgttgaccaaactttttcttataaat 18167433  T
Q  110 ag 111  Q
    ||    
T  18167434 ag 18167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 39030648 - 39030587
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  39030648 gtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 39030587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 966272 - 966224
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||| |||||||||||||||||||||| | ||||||||| |||||||||    
T  966272 ctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6126948 - 6126908
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  6126948 ctccggtcctatttataagagaattttgggtcaacaaaagt 6126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11795292 - 11795168
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| |||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  11795292 ctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 11795193  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||||| |||||| ||||    
T  11795192 cttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 39290830 - 39290775
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||||||  | |||||||||| |||||||||||||||||||    
T  39290830 aaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 27081063 - 27080981
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaactttt 84  Q
    |||| ||||||||| |||||| ||||||||||||||||||  ||||||||   || |||||||||  ||||| |||| |||||    
T  27081063 tccgatcctatttacaagagacatttaggtcaacaaaagttgatgtatttaatctaaatttttaatcaaataaatcatctttt 27080981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 27081013 - 27081063
Alignment:
Q  68 taaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||| ||||    
T  27081013 taaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 37641997 - 37641951
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 38361743 - 38361713
Alignment:
Q  95 aattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||||||||    
T  38361743 aattctcttataaataggaccggagggagta 38361713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 1643466 - 1643495
Alignment:
Q  98 tctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||||||||    
T  1643466 tctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3549553 - 3549602
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 50  Q
    ||||||||||||||||||||||||||||  | |||||||||  |||||||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtatt 3549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 11574161 - 11574210
Alignment:
Q  76 tcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||| ||||||||||| |||  |||||||||||||||||||||| |||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 13539949 - 13539986
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  13539949 ttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 35584450 - 35584507
Alignment:
Q  72 tacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttt 129  Q
    ||||||||||||||||||| |||  ||||||||||||||| |  ||||| ||||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaatagaattggaggaagtatttt 35584507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 2366352 - 2366396
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 53  Q
    ||||||||||||||||||| ||||||||| |||  ||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttgg 2366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4444084 - 4444036
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||| |||||||||||||| ||||| |||||||||||  ||||||    
T  4444084 ctccggtcttatttataagagaattttagatcaacaaaagttgatgtat 4444036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13033175 - 13033127
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||| ||||||||||||||||| ||| |||||||||||||  ||||||    
T  13033175 ctccgatcctatttataagagaattttgggtcaacaaaagttgatgtat 13033127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21576070 - 21576030
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  21576070 ctccggtcctatttataagagaattttggatcaacaaaagt 21576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 26395150 - 26395082
Alignment:
Q  60 tttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||| |||||||||||||| |||||||||| ||||  ||  |||||||||||| |||||  |||||||    
T  26395150 tttttgactaaatacatcaatttttgttgactcaaatgtcctttataaataggatcggagaaagtattt 26395082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 36595782 - 36595818
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaa 36595818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37148961 - 37149001
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  37148961 ctccggtcctatttataatagaattttgggtcaacaaaagt 37149001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37642078 - 37642038
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  37642078 ctccggtcctatttataagagaattttgggtcaataaaagt 37642038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14984843 - 14984969
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 14984942  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  14984943 cttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 27159482 - 27159358
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27159482 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 27159383  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  27159382 cttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 31842919 - 31842795
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31842919 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 31842820  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  31842819 cttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 39402090 - 39401966
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39402090 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 39401991  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  39401990 cttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 44668217 - 44668093
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44668217 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 44668118  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  44668117 cttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9981653 - 9981779
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9981653 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9981752  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||| ||||    
T  9981753 cttataaataggaccggagggaatatt 9981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12483752 - 12483626
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12483752 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattct 12483653  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  12483652 cttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 47216823 - 47216698
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47216823 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 47216724  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||| ||||||||||||||    
T  47216723 cttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1050894 - 1051022
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  1050894 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaaaattct 1050993  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  1050994 cttataaataggaccggagggagtatttt 1051022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11795939 - 11796063
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11795939 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 11796038  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  11796039 cttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26471189 - 26471065
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  26471189 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattct 26471090  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  26471089 cttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34042702 - 34042829
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34042702 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 34042801  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||| ||||||||||||||||    
T  34042802 cttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 47777603 - 47777481
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  47777603 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctct 47777504  T
Q  103 tataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||    
T  47777503 tataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44955330 - 44955212
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  44955330 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattct 44955231  T
Q  101 cttataaataggaccggag 119  Q
    |||||||||||||||||||    
T  44955230 cttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 25694331 - 25694450
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 25694430  T
Q  107 aataggaccggagggagtat 126  Q
    ||||||||||||||||||||    
T  25694431 aataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 31159242 - 31159108
Alignment:
Q  124 tattttacaagaagtag----ttgttattttgttctttcatttattccaaaataaaatgatgacatagttgaattgaatcatcatcatacagacatttga 219  Q
    ||||||||||| |||||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  31159242 tattttacaaggagtagttgtttgttattctgttctttcatttattccaaaataaaatgatgacatagttgaattga---atcatcatacagacatttga 31159146  T
Q  220 ttgtagcaatcatgtggggccaagaaactagtagttct 257  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31159145 ttgtagcaatcatgtggggccaagaaactagtagttct 31159108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 47588457 - 47588335
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  47588457 ggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctctta 47588358  T
Q  105 taaataggaccggagggagtatt 127  Q
    ||||||  |||| ||||||||||    
T  47588357 taaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23278125 - 23278021
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23278125 ctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 23278026  T
Q  101 cttat 105  Q
    |||||    
T  23278025 cttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47969700 - 47969827
Alignment:
Q  1 ctccggtcctatttataa-gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattc 99  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||     
T  47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaatta 47969799  T
Q  100 tcttataaataggaccggagggagtatt 127  Q
    | ||||||||||||||||||||||||||    
T  47969800 ttttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 17556762 - 17556884
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaa-tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  17556762 ggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctctt 17556861  T
Q  104 ataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||    
T  17556862 ataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11897060 - 11897187
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||   ||||||||||||||||||||||||| ||||    
T  11897060 ctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttct 11897159  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    ||||||||||||||||||||||||||||    
T  11897160 cttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16448232 - 16448108
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| ||||||||||||| ||| | |||||| ||||||||||||||||| ||||     
T  16448232 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcc 16448133  T
Q  101 cttataaataggaccggagggagta 125  Q
    | |||||||| |||||||| |||||    
T  16448132 cctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 11989796 - 11989911
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||||| || |||||||||||   ||| ||||||||||||||||||||| ||||||||||| |||| ||||| |||| |||| ||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  110 aggaccggagggagta 125  Q
    ||||||||||||||||    
T  11989896 aggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37552147 - 37552272
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| ||| ||  |||||||| |||  |||||| ||||||||||||||||| | ||||||  | ||||||||||||||| ||||    
T  37552147 ctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttct 37552246  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||| ||||||||    
T  37552247 cttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12213598 - 12213484
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||| ||| ||||||||||||||  |||||||||||||| | ||||||||| || |||||||||||||||||| ||||| ||||||||||||||  ||||    
T  12213598 ctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttct 12213499  T
Q  101 cttataaataggacc 115  Q
    || ||||||||||||    
T  12213498 ctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12483634 - 12483760
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||||| |    || ||    ||||||||||  ||||||||||||| ||| ||||    
T  12483634 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttct 12483733  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  12483734 cttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 16448184 - 16448239
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11897178 - 11897053
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa-atacatcaacttttgttgacccaaaattc 99  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||  ||  | ||  || |  | | ||||||||||||||||||||| ||  |||    
T  11897178 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggt-taaaaattcagttcagatacatcaacttttgttgacctaactttc 11897080  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||||||||||    
T  11897079 tcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27159364 - 27159490
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  27159364 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 27159463  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  27159464 cttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 37552263 - 37552141
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| |||    || ||    | | |||||| |||| |||||||| |||  || |||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatct 37552164  T
Q  103 tataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||    
T  37552163 tataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 44668099 - 44668225
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  44668099 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 44668198  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  44668199 cttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9981771 - 9981646
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  9981771 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 9981672  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  9981671 cttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 1598461 - 1598379
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||| |||| || ||||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcggatggggtattt 1598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31842801 - 31842925
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  31842801 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 31842900  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  31842901 cttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39401972 - 39402096
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  39401972 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 39402071  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  39402072 cttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| || |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11796057 - 11795930
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | |||| |||  ||||||||||||| ||| ||||    
T  11796057 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttct 11795958  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||| |||||||    
T  11795957 cttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 12043616 - 12043726
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||| ||| ||||| ||||||||||||  |||||||| || | |||||||||| | |||||| || |||||||||   ||| || |||||||    
T  12043616 tcctatttataaaagatatttaagtcaacaaaagttgatgtattt-gattcaatttttaacaagatacattaatttttgttgatttaaatttttcttata 12043714  T
Q  107 aataggaccgga 118  Q
    ||||||||||||    
T  12043715 aataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 14984961 - 14984834
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  14984961 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 14984862  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||  |||||||    
T  14984861 cttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 26471139 - 26471197
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  26471139 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 47216773 - 47216829
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47216773 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47777487 - 47777603
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47777487 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttct 47777586  T
Q  101 cttataaataggaccgg 117  Q
    |||||||||||||||||    
T  47777587 cttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 1050934 - 1050883
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagtaattta 1050883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 5392211 - 5392278
Alignment:
Q  60 tttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||| |||||||||||||||| |||||| ||| |||||||||| || |||||| || |||||||    
T  5392211 tttttaaccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtatt 5392278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 12047117 - 12047223
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaattttt-aactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||||||| ||  || ||||||| |||| ||||||| |||||||||||| ||||  |||||||||  ||| |||| ||||| |||||||    
T  12047117 gtcctatttataagagaaagttgagttaacaaaaagtga-tgtatttagactgaattttttaactggatacatcaatctttattgatccaaatttctctt 12047215  T
Q  104 ataaatag 111  Q
    ||||||||    
T  12047216 ataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 12213546 - 12213605
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||| || ||||||||||| || ||||||||||||||| ||| |||||||||||    
T  12213546 ctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 17556877 - 17556751
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc-aacttttgttgacccaaaattc 99  Q
    |||||||||||||||||||||||| || |||||||||||||  |||||| | |    || ||    | ||||||||  |||||||||||||| ||  |||    
T  17556877 ctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttc 17556778  T
Q  100 tcttataaataggaccggagggagtat 126  Q
    |||||||||||||||| ||||||||||    
T  17556777 tcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25694443 - 25694317
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  |||||| |||| | ||| ||||    
T  25694443 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttct 25694344  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    ||||||||||||| | |||||||||||    
T  25694343 cttataaataggatcagagggagtatt 25694317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 571542 - 571622
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||| | ||||||| ||||||||||| |||||  ||||| |||||||||||| | || |||||| ||||||||    
T  571542 ggtcaacaaaagtta-tgtatttagactgaattttgaactaggtacattaacttttgttgatcaaatattctcctataaata 571622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34042820 - 34042695
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  | ||||||||||| ||| ||||    
T  34042820 ctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttct 34042721  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  34042720 cttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 12062568 - 12062679
Alignment:
Q  3 ccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctct 102  Q
    |||||||||||||||| ||| |||| | |||||||||||  |||||| | || | |||||||||  | |||||| || |||||||||   ||| ||||||    
T  12062568 ccggtcctatttataaaagatattttgatcaacaaaagttgatgtatct-gattcaatttttaatcagatacattaatttttgttgatttaaatttctct 12062666  T
Q  103 tataaataggacc 115  Q
    |||||||||||||    
T  12062667 tataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 12062679 - 12062568
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctta 104  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||| | || | ||  || ||  | ||||||||||||||||||| | |||  ||| |||    
T  12062679 ggtcctatttataagagaaatttaaatcaacaaaaattaatgtatct-gattaaaaattgaatcagatacatcaacttttgttgatcaaaatatctttta 12062581  T
Q  105 taaataggaccgg 117  Q
    |||||||||||||    
T  12062580 taaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 21537945 - 21538001
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| |||  |||||||||||||| || ||||| |||||||    
T  21537945 atacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 23278087 - 23278131
Alignment:
Q  81 ttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 47969753 - 47969694
Alignment:
Q  67 ctaaatacatcaacttttgttgacccaaaattctc-ttataaataggaccggagggagta 125  Q
    ||||||||||  ||||||||||||| ||| ||||| |||||||||||||||||| |||||    
T  47969753 ctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagagta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 3739838 - 3739900
Alignment:
Q  29 ggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||| ||||| |||||||||||    |||||||||| |||||||| ||||||||||||||    
T  3739838 ggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgacc 3739900  T

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Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 19391910 - 19392004
Alignment:
Q  31 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||| ||| ||||| |||  ||||||| |  |||||||| |||||||||| || |||  |||||||||| ||||||| ||||| ||||    
T  19391910 tcaacaaaagttaatatatttcgaccaaatttttgagaaaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29855142 - 29855084
Alignment:
Q  31 tcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttga 89  Q
    ||||||||||| ||||||||| |    |||||||||| |||||||||||||||||||||    
T  29855142 tcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttga 29855084  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 47588411 - 47588469
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    ||||||||  ||||||||||||| ||| |||||||||||||| |||| |||| ||||||    
T  47588411 aaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 5392198 - 5392145
Alignment:
Q  74 catcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 127  Q
    |||||| |||||||||| ||||  |||||||||||||||| ||||| |||||||    
T  5392198 catcaatttttgttgacacaaatgtctcttataaataggatcggagtgagtatt 5392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 5392267 - 5392218
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 53  Q
    |||||| || ||||||||||||||||||||| ||||||  ||||||||||    
T  5392267 cggtccaatatataagagaaatttaggtcaataaaagttgatgtatttgg 5392218  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11774536 - 11774605
Alignment:
Q  18 agagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgtt 87  Q
    ||||||| |||||||||||||| |  ||||| ||  |||||||||| ||||| |||| ||||||||||||    
T  11774536 agagaaagttaggtcaacaaaaattgatgtaattaaactgaattttgaactagatacgtcaacttttgtt 11774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 19610840 - 19610775
Alignment:
Q  65 aactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttta 130  Q
    ||||||||||||||| |||||||||||||    | ||||||||| |||||  ||||||||||||||    
T  19610840 aactaaatacatcaatttttgttgacccatttgtatcttataaaaaggacaagagggagtatttta 19610775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1051012 - 1050964
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||||||||||||||| ||| ||||||| |||||  ||||||    
T  1051012 ctccggtcctatttataagagaattttgggtcaactaaagttgatgtat 1050964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 12069499 - 12069607
Alignment:
Q  8 cctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataa 107  Q
    ||||||||| ||||||| ||  || ||||||| |  |||||||| |||||||||||||||   ||| |||||||||| |  || |||  |||||||||||    
T  12069499 cctatttatgagagaaagttgagttaacaaaaatttatgtatttagactgaatttttaacctgataaatcaacttttatcaactcaattttctcttataa 12069598  T
Q  108 ataggaccg 116  Q
    ||| |||||    
T  12069599 ataagaccg 12069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21537993 - 21537869
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| || ||||||||||||||| ||  ||||||||||||  |||||| || ||| || ||| ||  | ||||||||||||| |||||| |||   |||    
T  21537993 ctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatctgaactaaaatttgaatcagatacatcaactttcgttgactcaactctct 21537894  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||| ||||||| | |||| ||||||    
T  21537893 cttgtaaatagaaacggaaggagta 21537869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26471071 - 26471111
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| | |||||||||||    
T  26471071 ctccggtcctatttataagagaattttggatcaacaaaagt 26471111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 30800460 - 30800556
Alignment:
Q  30 gtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||  |||||| |  |||||||||| ||  | ||||||||||||||||| ||||||  ||||| | |||||| || || |||||||||    
T  30800460 gtcaacaaaagttgatgtatctatactgaattttgaatcagatacatcaacttttgttaacccaacgttctcatgtaaataagatcgaagggagtat 30800556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 33668748 - 33668824
Alignment:
Q  14 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgac 90  Q
    ||||||||||| || || |||||||| | ||||||| | ||||||||||||||| |||| ||| |  ||||||||||    
T  33668748 tataagagaaaattgggacaacaaaactcaatgtatctagactgaatttttaaccaaatgcattactttttgttgac 33668824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47216705 - 47216745
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||| ||||||||||||||| ||| |||||||||||||    
T  47216705 ctccggtactatttataagagaattttgggtcaacaaaagt 47216745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 47833617 - 47833741
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47833617 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 47833716  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  47833717 cttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 48336269 - 48336395
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  48336269 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 48336368  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  48336369 cttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3904807 - 3904682
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3904807 ctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattct 3904708  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  3904707 cttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 53337376 - 53337501
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  53337376 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaattct 53337475  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||    
T  53337476 cttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 3372127 - 3372251
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  3372127 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattat 3372226  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  3372227 cttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6122017 - 6121893
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6122017 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 6121918  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  6121917 cttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 20538810 - 20538686
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  20538810 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattct 20538711  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  20538710 cttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3992982 - 3993107
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3992982 ctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 3993081  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||| |||||||||||||||    
T  3993082 cttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 24704376 - 24704501
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  24704376 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattct 24704475  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| ||||||||||||    
T  24704476 cttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42797738 - 42797862
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  42797738 ctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattct 42797837  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  42797838 cttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 46797731 - 46797855
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  46797731 ctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattct 46797830  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  46797831 cttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 33621805 - 33621928
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatctt 33621904  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||    
T  33621905 ataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 5986890 - 5987008
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986890 ctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaa 5986989  T
Q  109 taggaccggagggagtatt 127  Q
    ||||||||||| |||||||    
T  5986990 taggaccggagagagtatt 5987008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47838741 - 47838615
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  47838741 ctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattct 47838642  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  47838641 cttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 52756681 - 52756806
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52756681 ctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 52756780  T
Q  101 cttataaataggaccggagggagtat 126  Q
     ||||||||||||||| |||||||||    
T  52756781 tttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 43900555 - 43900679
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43900555 ctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattct 43900654  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  43900655 cttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 51894706 - 51894582
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  51894706 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaattct 51894607  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  51894606 cttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 41469887 - 41469764
Alignment:
Q  4 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctctt 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||    
T  41469887 cggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctctt 41469788  T
Q  104 ataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||    
T  41469787 ataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 3422073 - 3422192
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 3422171  T
Q  107 aataggaccggagggagtatt 127  Q
    |||||||||||||||||||||    
T  3422172 aataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7579316 - 7579440
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  7579316 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 7579415  T
Q  101 cttataaataggaccggagggagta 125  Q
    ||||||||||| |||||||| ||||    
T  7579416 cttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40913313 - 40913185
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| ||||| ||||    
T  40913313 ctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttct 40913214  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||| ||||    
T  40913213 cttataaataggaccggagggagtttttt 40913185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 41615794 - 41615676
Alignment:
Q  7 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttata 106  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttata 41615695  T
Q  107 aataggaccggagggagta 125  Q
    |||||||||||| ||||||    
T  41615694 aataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33551207 - 33551312
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  33551207 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaattct 33551306  T
Q  101 cttata 106  Q
    ||||||    
T  33551307 cttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26231583 - 26231688
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  ||| ||||||||    
T  26231583 ctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgtaaaccgaaaattct 26231682  T
Q  101 cttata 106  Q
    ||||||    
T  26231683 cttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 17344219 - 17344346
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| |||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    ||||||||||||||||||| ||||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    |||||||||| ||  |||||||||||||    
T  17344319 cttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25855093 - 25855182
Alignment:
Q  5 ggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaa 94  Q
    |||||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  25855093 ggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacccaa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 29845656 - 29845769
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc-aacttttgttgacccaaaattctctta 104  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| |||||||| |||||||||||| ||      ||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaacttttgttgatcc------ctctta 29845748  T
Q  105 taaataggaccggagggagta 125  Q
    |||||||||||||||||||||    
T  29845749 taaataggaccggagggagta 29845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    |||||||||||| || || |||||||||||||  ||||||||||| |||||||||||| | ||||||||| |||||||||||||||  | ||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  110 agg 112  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 17236862 - 17236919
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4780302 - 4780425
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||| |||||  |||  ||||||| ||||||  |  |  |||||||||  | |||||| |||||||||||||| ||| ||||    
T  4780302 ctccggtcttatttataagagacatttacatcagtaaaagtggatgtatccgatcc-aatttttaatcagatacattaacttttgttgaccaaaatttct 4780400  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||    
T  4780401 cttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43900673 - 43900545
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||| |||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  43900673 ctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttct 43900574  T
Q  101 cttataaataggaccggagggagtatttt 129  Q
    |||||||||||||||||||||||||||||    
T  43900573 cttataaataggaccggagggagtatttt 43900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42797856 - 42797730
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  42797856 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 42797757  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||| ||||||||||||| ||||||    
T  42797756 cttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47833735 - 47833609
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47833735 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 47833636  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  47833635 cttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17236912 - 17236839
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgta-tttggactgaatttttaactaaata 73  Q
    |||||||||||||||||||| |||||| |||||||||||||  ||||| ||| ||||||||||||||| |||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaaccaaata 17236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4780419 - 4780371
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4780419 ctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24704494 - 24704370
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||||||||||||||| ||| ||||||||||||| ||||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  24704494 ctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 24704395  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  24704394 cttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3372245 - 3372119
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3372245 ctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3372146  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  3372145 cttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3993100 - 3992974
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| |||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3993100 ctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 3993001  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  3993000 cttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 43095336 - 43095230
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat 109  Q
    ||||||||||||| ||||| |||||||||| | ||||||| ||| |  |||||| ||| | |||||| || |||||||| ||||||  ||||||||||||    
T  43095336 tatttataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacattaatttttgttggcccaaacgtctcttataaat 43095237  T
Q  110 aggaccg 116  Q
    | |||||    
T  43095236 aagaccg 43095230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 44900086 - 44900208
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||||| |||  |||||||||||||  || ||| ||| |  | | |||||| | |||| |||||||||||||||||| |   ||    
T  44900086 ctccggtcctatttataagagatattctggtcaacaaaagttgatatatctggtccaattgtttaaccagatacgtcaacttttgttgacccagacgact 44900185  T
Q  101 cttataaataggaccggagggag 123  Q
    ||  |||||||||||||||||||    
T  44900186 ctcgtaaataggaccggagggag 44900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  54 actgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    ||||||||||||||   |||||||||||||| |||||||| | ||||||||||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48336387 - 48336261
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  48336387 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 48336288  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  48336287 cttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51894588 - 51894714
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| |||    || ||    | ||| ||||  ||||||||||||| ||| || |    
T  51894588 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaattttt 51894687  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  51894688 cttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3904689 - 3904814
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||||||||| |  |||||||| |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  3904689 ctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 3904788  T
Q  101 cttataaataggaccggagggagtat 126  Q
     ||||||||||||||||||| |||||    
T  3904789 tttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7579434 - 7579309
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||||||||| ||| |||||||||||||  |||||| | |    || ||  | | ||||||||  ||||||||| ||| ||| ||||    
T  7579434 ctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttct 7579335  T
Q  101 cttataaataggaccggagggagtat 126  Q
    |||||||||||||||||||| |||||    
T  7579334 cttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 31013036 - 31013117
Alignment:
Q  10 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    ||||||||| ||| |||||| |||||||||||  ||||||||||  | |||| ||||||| |||||||| ||||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacc 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 33551257 - 33551200
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  33551257 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 40913263 - 40913320
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||  ||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  40913263 aaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47838623 - 47838748
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  47838623 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttct 47838722  T
Q  101 cttataaataggaccggagggagtat 126  Q
    ||||||||||||| |||||| |||||    
T  47838723 cttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6121899 - 6122023
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||| | ||| ||||    
T  6121899 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttct 6121998  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  6121999 cttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 20538760 - 20538816
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538760 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 45725905 - 45725977
Alignment:
Q  44 atgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccg 116  Q
    |||||||| |||| |||| |||||||||||| | |||||||||||||  ||  ||||||||||||||||||||    
T  45725905 atgtatttagactaaattcttaactaaatacgttaacttttgttgacgaaactttctcttataaataggaccg 45725977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 53337494 - 53337370
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| |||||| ||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  53337494 ctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 53337395  T
Q  101 cttataaataggaccggagggagta 125  Q
    |||||||||||||||||||| ||||    
T  53337394 cttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 9876653 - 9876739
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaa-tttttaactaaatacatcaacttttgttgacccaaa 95  Q
    |||||||||||||||||||| || ||||||| | ||||||| | |||| || |||||||| |||||||| || |||||||||||||||    
T  9876653 ctatttataagagaaatttacgttaacaaaatttaatgtatct-gactcaattttttaaccaaatacataaatttttgttgacccaaa 9876739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||| ||   ||||||||||||| ||||||||||||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5987000 - 5986950
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 51  Q
    ||||||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 26231622 - 26231576
Alignment:
Q  80 cttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 44900130 - 44900080
Alignment:
Q  75 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||||||||    
T  44900130 atcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1716307 - 1716417
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||| ||||||||||||| | || |||||||||||||  |||||| ||  |  |  ||||||| | || |||||||||| ||||||| ||| ||||    
T  1716307 ctccggtcttatttataagagataatttggtcaacaaaagttgatgtatctgatccaa--ttttaaccagatgcatcaactttggttgacctaaacttct 1716404  T
Q  101 cttataaatagga 113  Q
    |||||||||||||    
T  1716405 cttataaatagga 1716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 25855139 - 25855082
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    |||||||| ||||||||||||| |||  |||||| |||||||||||| ||||||||||    
T  25855139 aaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41594660 - 41594765
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||| |  ||||||||||| || |||||||||||||  |||||| ||| |  |||||| ||| | ||||||||||||  ||||||||||  ||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaacttaagttgacccaactttct 41594759  T
Q  101 cttata 106  Q
    ||||||    
T  41594760 cttata 41594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3422184 - 3422144
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  3422184 ctccggtcctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40913195 - 40913235
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  40913195 ctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41469772 - 41469812
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  41469772 ctccggtcctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 46797781 - 46797725
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  46797781 aaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46797849 - 46797809
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  46797849 ctccggtcctatttataagagaattttgggtcaacaaaagt 46797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 6924802 - 6924724
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttg 85  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||||| || |||||| ||  | || ||||||||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaattttgaatcagatgcatcaacttttg 6924724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 41469840 - 41469899
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 128  Q
    ||||||||  ||||||||||||| ||| |||| ||||||||||||||| ||| |||||||    
T  41469840 aaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 41615683 - 41615794
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    ||||||||||||||||||||||| || | |||||||||||  |||||||| |    || ||    | |||||||| |||||||||||||| ||  |||||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  102 ttataaatagga 113  Q
    ||||||||||||    
T  41615783 ttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 6422530 - 6422600
Alignment:
Q  58 aatttttaactaaatacatcaacttttgttgacccaaaattctcttataaat-aggaccggagggagtatt 127  Q
    |||||| ||||||||| ||||| ||||||||||| |||  |||||||||||| |||| |||| ||||||||    
T  6422530 aattttaaactaaatatatcaatttttgttgacctaaatatctcttataaataaggatcggatggagtatt 6422600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20538692 - 20538730
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  20538692 ctccggtcctatttataagagaattttgggtcaacaaaa 20538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 41594708 - 41594654
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||||  ||||||||||  | ||||||||| |||||    
T  41594708 atacatcaacttttgttgacccaactttctcttatatgtgggaccggagagagta 41594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 52756731 - 52756681
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 119  Q
    ||||||||  |||| |||||||| ||| |||||||||||||||||||||||    
T  52756731 aaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 50430492 - 50430533
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaata 110  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  50430492 aaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 32822325 - 32822285
Alignment:
Q  9 ctatttataagagaaatttaggtcaacaaaagtgaatgtat 49  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  32822325 ctatttataagaaaaatttaggtcaacaaaaatggatgtat 32822285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33621920 - 33621880
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  33621920 ctccggtcctatttataagataattttgggtcaacaaaagt 33621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12866 - 12992
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12866 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 12965  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  12966 cttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12984 - 12858
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||| ||| ||||| |||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  12984 ctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12885  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  12884 cttataaataggaccggaggtagtatt 12858  T

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Target: scaffold0204 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 23791 - 23917
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  23791 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 23890  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  23891 cttataaataggaccggagggagtatt 23917  T

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Target: scaffold0204; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23909 - 23783
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    |||||||||||||||||||| || ||| |||||||||||||  |||||| | |    || ||    | ||||||||  ||||||||||||| ||| ||||    
T  23909 ctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 23810  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||| ||||||    
T  23809 cttataaataggaccggaggtagtatt 23783  T

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Target: scaffold0464 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6255 - 6129
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  6255 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaatttt 6156  T
Q  101 cttataaataggaccggagggagtatt 127  Q
    |||||||||||||||||||||||||||    
T  6155 cttataaataggaccggagggagtatt 6129  T

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Target: scaffold0464; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  79 acttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6137 - 6177
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  6137 ctccggtcctatttataagaaaattttgggtcaacaaaagt 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 1342 - 1453
Alignment:
Q  2 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctc 1441  T
Q  102 ttataaatagga 113  Q
    ||||||||||||    
T  1442 ttataaatagga 1453  T

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Target: scaffold1707; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 1391 - 1342
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 118  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||||||||    
T  1391 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 231427 - 231300
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||| ||||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| |||||  || ||||||||||||||||| || |||||    
T  231427 ctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattct 231328  T
Q  101 cttataaataggaccggagggagtattt 128  Q
    | ||||||||||||||||||||||||||    
T  231327 cctataaataggaccggagggagtattt 231300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 231379 - 231433
Alignment:
Q  71 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 125  Q
    |||||| |||||||||||| ||||  ||||||||||| ||||| |||||||||||    
T  231379 atacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 231309 - 231349
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagt 41  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  231309 ctccggtcctatttataggagaatattaggtcaacaaaagt 231349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 13845 - 13731
Alignment:
Q  6 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc--aacttttgttgacccaaaattctctt 103  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||| ||||||||  |||||||||||| ||      |||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaact-aatacatcaaaacttttgttgatcc------ctctt 13753  T
Q  104 ataaataggaccggagggagta 125  Q
    ||||||||||||||||||||||    
T  13752 ataaataggaccggagggagta 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 108 - 1
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattct 100  Q
    ||||||| ||||||||| ||||||  | |||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||| | |  ||||    
T  108 ctccggttctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgactttct 10  T
Q  101 cttataaat 109  Q
    |||||||||    
T  9 cttataaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 59 - 115
Alignment:
Q  69 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||| |   ||||| ||||||||| ||||||||||||||    
T  59 aaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12477 - 12387
Alignment:
Q  1 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacc 91  Q
    |||||||||||||||||||||| |||| |||||| ||||||   ||| ||||| || |||| ||||| | ||||||||  |||||||||||    
T  12477 ctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattttgttgacc 12387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 12435 - 12480
Alignment:
Q  77 caacttttgttgacccaaaattctcttataaataggaccggaggga 122  Q
    |||||||| |||||| |||  |||||||||||||||||||||||||    
T  12435 caactttttttgaccaaaatatctcttataaataggaccggaggga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 312747 - 312843
Alignment:
Q  24 atttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 120  Q
    |||| ||||||||||||| ||||||| ||  |  |||||| ||||| ||||||||| ||||||||| | |||| |||||| ||||||  ||||||||    
T  312747 attttggtcaacaaaagttaatgtatctgatccaaattttaaactagatacatcaatttttgttgatcaaaaagtctcttttaaataaaaccggagg 312843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 77466 - 77495
Alignment:
Q  98 tctcttataaataggaccggagggagtatt 127  Q
    ||||||||||||||||||||||||||||||    
T  77466 tctcttataaataggaccggagggagtatt 77495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 125
Target Start/End: Complemental strand, 77372 - 77344
Alignment:
Q  97 ttctcttataaataggaccggagggagta 125  Q
    |||||||||||||||||||||||||||||    
T  77372 ttctcttataaataggaccggagggagta 77344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 492332 - 492303
Alignment:
Q  97 ttctcttataaataggaccggagggagtat 126  Q
    ||||||||||||||||||||||||||||||    
T  492332 ttctcttataaataggaccggagggagtat 492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 128
Target Start/End: Original strand, 16772 - 16800
Alignment:
Q  100 tcttataaataggaccggagggagtattt 128  Q
    |||||||||||||||||||||||||||||    
T  16772 tcttataaataggaccggagggagtattt 16800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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