View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11768_low_64 (Length: 237)
Name: NF11768_low_64
Description: NF11768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11768_low_64 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 37718197 - 37717963
Alignment:
| Q |
3 |
gagaatcttaaaaaatacttgggaatatggtatcacgatctggaaccacaaacagtggtttgggtagccaacagaaacaaccctattgtagattctaaag |
102 |
Q |
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| T |
37718197 |
gagaatcttaaaaaatacttgggaatatggtatcacgatctggaaccacaaacagtggtttgggtagccaacagaaacaaccctattgtagattctaaag |
37718098 |
T |
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| Q |
103 |
gagtttttcaaatcgcaaaggatggaaatatggtagtagcagatgcatcacaaagttactggtccacaaacttagaagcgtcctcatcaagaaccagggt |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
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| T |
37718097 |
gagtttttcaaatcgcaaaggatggaaatatggtagtagcagatgcatcacaaagttactggtccacaaacttagaagcgtcctcgtcaagaaaaagggt |
37717998 |
T |
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| Q |
203 |
agtgaagctcttggattctggaaacctagtgctta |
237 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
37717997 |
agtgaagctcttggattctggaaacctagtgctta |
37717963 |
T |
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