View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11768_low_69 (Length: 222)
Name: NF11768_low_69
Description: NF11768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11768_low_69 |
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Alignment Details
Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53757593 - 53757708
Alignment:
| Q |
1 |
gacaccaattaggagcttgttacaaaagctacatacaataaagagtcagcaaatatctacttacaagggcaaaaatcaattatcttgaggaaattcgagt |
100 |
Q |
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| T |
53757593 |
gacaccaattaggagcttgttacaaaagctacatacaataaagagtcaacaaatatctgcttacaagggcaaaaatcaattatcttgagaaaattcgagt |
53757692 |
T |
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| Q |
101 |
gtggtcacaagactca |
116 |
Q |
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||||||||||||||| |
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| T |
53757693 |
ttggtcacaagactca |
53757708 |
T |
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