View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11769_high_10 (Length: 363)
Name: NF11769_high_10
Description: NF11769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11769_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 5726178 - 5726543
Alignment:
| Q |
1 |
taagcttttgacctcatgaaacatt----atcaccaatttt-ttattagttattcaatttggaacctctagcatggattttactatatccatctgagctt |
95 |
Q |
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| T |
5726178 |
taagcttttgacctcatgaaacatgcatgatcaccaatttttttattagttattcaatttggaacctctagcatggattttactatatccatctgagcat |
5726277 |
T |
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| Q |
96 |
attttactccaacttgtatacttgcttaattgtttattatgagtgtgagataaatgatatatatttaaactaattatttagtttggagttccaatttaaa |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
5726278 |
attttactccaacttgtatacttgcttaattgtttattatgagtatgagataaatgatatatatttaaactaattatttagtttggagtttcaatttaaa |
5726377 |
T |
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| Q |
196 |
cctgtgcatatgaaaaatatatacccgaatatgtcaatatcataaaatgatatcaattaactcaaaaggaatctct--------------acgagacatt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| |
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| T |
5726378 |
cctgtgcatatgaaaaatatatacccgaatatgtcaatatcataaaatgatatcaattaactcaaaaggaatctctgcaattgctcgtagatgttacatt |
5726477 |
T |
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| Q |
282 |
atttgtttgctaaggaaaaactaagaagttaagggtgcaaaaattaactctaaattttatgcttcat |
348 |
Q |
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||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
5726478 |
atttg-ttgctaaggaaaaactaagaagttaaggttgcaaaaattaactctaaattttatgcttcat |
5726543 |
T |
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