View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11769_high_26 (Length: 229)
Name: NF11769_high_26
Description: NF11769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11769_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 25897627 - 25897797
Alignment:
| Q |
6 |
attaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaacatgaattgtttgattttcatttaatgataattagattc |
105 |
Q |
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| T |
25897627 |
attaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaatatgaattgtttgattttcatttaatgataattagattc |
25897726 |
T |
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| Q |
106 |
atgaatcatttaaccatgagactccataaaatctatgttcaacaataggtagcttgaaatgaatttagaac |
176 |
Q |
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| T |
25897727 |
atgaatcatttaaccatgagactccataaaatctatgttcaactataggtagcttgaaatgaatttagaac |
25897797 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 25897816 - 25897852
Alignment:
| Q |
193 |
ctgacccagaaacggtatcaatcttcatacgctttct |
229 |
Q |
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| T |
25897816 |
ctgacccagaaacggtatcaatcttcatacgctttct |
25897852 |
T |
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