View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11769_low_22 (Length: 250)
Name: NF11769_low_22
Description: NF11769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11769_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 34416725 - 34416964
Alignment:
| Q |
1 |
gaagatcagatgaatatgacattttattctctatcttctgtatctgcggacgtttgataccttacaaaggtagtgatgccttaagatgtgttgcaactta |
100 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
34416725 |
gaagatcagatgaatatgacattttattctttatcttctgtatctgcggacgtttgataccttacaaaggtagtgatgccttaagatgtgttacaactta |
34416824 |
T |
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| Q |
101 |
agatattgcaaaattaagaaattctgtaaacccattaaagccaacagacgtatgagatacggtgaagccagcccacaaatgtatattccttttggtgttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34416825 |
agatattgcaaaattaagaaattctgtaaacccattaaagccaacagacgtatgagatacggtgaagccagcccacaaatgtatattccttttggtgttt |
34416924 |
T |
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| Q |
201 |
ttgtgtgcctcaatgatactgagagtttgaatgatgtcca |
240 |
Q |
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||||||||||||||||||| ||||||||||||||| |||| |
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| T |
34416925 |
ttgtgtgcctcaatgataccgagagtttgaatgatatcca |
34416964 |
T |
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