View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1176_low_2 (Length: 918)
Name: NF1176_low_2
Description: NF1176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1176_low_2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 740; Significance: 0; HSPs: 38)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 740; E-Value: 0
Query Start/End: Original strand, 30 - 852
Target Start/End: Complemental strand, 37429172 - 37428336
Alignment:
| Q |
30 |
ctaacaacttaaacggaacaattccacactggtgttattccttgccttcgttgtcatggttgtatctcaatgataactaactcacaggttc--------- |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
37429172 |
ctaacaacttaaacggaacaattccacactggtgttattccttgccttcgttgtcatggttgtatctcaatgataaccaactcacagggtcaattggtga |
37429073 |
T |
|
| Q |
121 |
------tgctcgttcattgaattatctattcctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttactta |
214 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37429072 |
gttctctactagttcattgaattatctattcctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttactta |
37428973 |
T |
|
| Q |
215 |
gctttgtcatcaaccaacttgagaggtgtagtagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttcttt |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428972 |
gctttgtcatcaaccaacttgagaggtgtagtagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttcttt |
37428873 |
T |
|
| Q |
315 |
ctatcaactttgacagtaatattgactccatctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcg |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428872 |
ctatcaactttgacagtaatattgactccatctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcg |
37428773 |
T |
|
| Q |
415 |
aataccaagtctgcaagaattagatctctccaaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatat |
514 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428772 |
aataccaagtctgcaagaattagatctctccaaaaacaacattcatgggaaaaatttccatatggtttcataaaatgctcttaaactcatggaagtatat |
37428673 |
T |
|
| Q |
515 |
ttggcacgttgatctcagtttcaacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttcatgcat |
614 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428672 |
ttggcacgttgatctcagtttcaacaagttgcaaggagatcttccaattccaccttatggcattgaatactttttactctctaacaacaacttcatgcat |
37428573 |
T |
|
| Q |
615 |
caaatactttttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttc |
714 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
37428572 |
caaatactttttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaaacatcca-ttcccaagttgagaattttc |
37428474 |
T |
|
| Q |
715 |
gacatctctaataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagt |
814 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428473 |
gacatctataataaaatttttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagt |
37428374 |
T |
|
| Q |
815 |
acatgggtaaggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428373 |
acatgggtaaggccaattactataatgattctgtggtg |
37428336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 152 - 609
Target Start/End: Complemental strand, 37640175 - 37639719
Alignment:
| Q |
152 |
aataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagact |
251 |
Q |
| |
|
|||||||| |||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||| ||||| || || | |
|
|
| T |
37640175 |
aataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttacttacttagatttgtcatcaacaaacttgagtggtgttgtggatt |
37640076 |
T |
|
| Q |
252 |
tttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacc |
351 |
Q |
| |
|
|| || | ||||| || || || ||| | || ||| |||||||| || ||||| ||||||||||||||| |||| || | | ||||||||||| ||| |
|
|
| T |
37640075 |
ttcaccaattttcaaaattaaacaaactaagttcccttgatctttcccataatagttttctttctatcaacattgatagcagtgctgactccatcttacc |
37639976 |
T |
|
| Q |
352 |
tagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctccaaaaac |
451 |
Q |
| |
|
| |||| | ||||||||||||||||| | |||||||| |||||||| |||||| |||| ||| ||| | | ||||| |||||||||||||| ||| |
|
|
| T |
37639975 |
caaccttgaatcattatatttatcttctgctaatattaaaagttttcccaaattcctagcacgagtacataatttgcaatggttagatctctccaataac |
37639876 |
T |
|
| Q |
452 |
aacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttgcaagga |
551 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||| | |||||||||| |||||||| | ||| || || ||||||| |||||||||| |||||||||| |
|
|
| T |
37639875 |
aacattcatgggaaaa-ttcccaaatggtttcataagaagctcttaaacacatggaaggacattcggtacattgatcttagtttcaacatgttgcaagga |
37639777 |
T |
|
| Q |
552 |
gatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
||||||| ||||||||| ||||||||| ||||||||||||||| || |||||||||| |
|
|
| T |
37639776 |
catcttccaattccacctgatggcattgtatactttttactctcaaataacaacttca |
37639719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 146 - 609
Target Start/End: Complemental strand, 37824204 - 37823742
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| ||| |||| ||||||||||||||||||| || ||||||||||||| | ||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37824204 |
ctctctaataacaacctacgaggtcattttccaaattcaatatttcaactccaaaatcttaccgagttaattttgtcatcaacaaacttgagtggtgttg |
37824105 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | || ||||| |||||| ||||||| |||||| |||||||| ||| || | | ||||||||| |
|
|
| T |
37824104 |
tggattttcaccaattttcaaaattaaacaaactaaattccctcgttctttcacacaatacttttcttgctatcaacactgatagcagtgctgactccat |
37824005 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| | ||||| ||||||| ||| | ||||||||||||||||| |||||| |||| | | |||||| ||||||| ||||||||||||| |
|
|
| T |
37824004 |
cttacccaaccttttttcattagatttatcctctgctaatattaatagttttcctaaattcctagcgcaactaccaaatctgcaatcattagatctctcc |
37823905 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||| | |||||| |||||| ||||||||||||||||| |
|
|
| T |
37823904 |
aacaacaacattcatgggaaaa-ttcccaaatggtttcataagaagctcttaaactcatggaaggacatttggtccgttgacctcagtttcaacaagtta |
37823806 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37823805 |
caaggagatcttccaattccaccttctggcattcaatacttttcactctcaaataacaacttca |
37823742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 146 - 609
Target Start/End: Complemental strand, 37711933 - 37711477
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37711933 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttacttacttatatttgtcatcaacaaacttgagtggtgttg |
37711834 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | |||| |||||| ||||||| ||||||||||||||| |||| || | |||||||||||| |
|
|
| T |
37711833 |
tggattttcaccaattttcaaaattaaacaaactatggtatctcgttctttcacacaatacttttctttctatcaacattgatagcagtattgactccat |
37711734 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
| ||| | |||| | ||||| ||||||| ||| | ||||||||||||||||| |||||| ||| |||| ||||||| ||||||||||||| |
|
|
| T |
37711733 |
catacccaaccttttttcattagatttatcctctgctaatattaatagttttcctaaattccaagcacgaaa------tctgcaaacattagatctctcc |
37711640 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||| | ||| || || ||||||| |||||||||| |||| |
|
|
| T |
37711639 |
aacaacaacattcatgggaaaa-ttcccaaatggtttcatacgaagctcttaaactcatggaaggacattcggtacattgatcttagtttcaacatgttg |
37711541 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37711540 |
caaggagatcttccaattccaccatctggcattcaatacttttcactctcaaataacaacttca |
37711477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 146 - 609
Target Start/End: Original strand, 37400729 - 37401185
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37400729 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttgaactccaaaatcttacttacttagatttgtcatcaacaaacttgagtggtgttg |
37400828 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| || ||| ||||||| || ||||| ||||||||||||||| |||| || | | ||||||||| |
|
|
| T |
37400829 |
tggattttcaccaattttcaaaattaaacaaactatggtttctccatctttcccataatagttttctttctatcaacattgatagcagtgctgactccat |
37400928 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| | |||| ||||||| ||| | ||||||||||||||||| |||||| ||| |||| |||| || |||| |||||||| |
|
|
| T |
37400929 |
cttacccaacctttttttattagatttatcctctgctaatattaatagttttcctaaattcccagcacgaaa------tctgaaaagattatatctctcc |
37401022 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| |||||||||| |||||||| |||||| |||||||||||| | ||||||||||||||||||| | ||| | || | || ||||||||||||||||| |
|
|
| T |
37401023 |
aataacaacattcgtgggaaaa-ttcccaaatggtttcataagaagctcttaaactcatggaaggacattcagtacttagacctcagtttcaacaagtta |
37401121 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||| |||||| || |||||||||| |
|
|
| T |
37401122 |
caaggagatcttccaattccaccttctggcattgaatacttttcactctcaaataacaacttca |
37401185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 162 - 609
Target Start/End: Complemental strand, 37594617 - 37594177
Alignment:
| Q |
162 |
tacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaattt |
261 |
Q |
| |
|
||||||||| ||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||||||||| ||||| || || ||| || | || |
|
|
| T |
37594617 |
tacatggtcattttccaaattcaatatttcaactccaaaatctatcttacttaactttgtcatcaaccaacttgagtggtgttgtcgattttcaccaatt |
37594518 |
T |
|
| Q |
262 |
ttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaat |
361 |
Q |
| |
|
||| || || || ||| | ||| ||||||| |||||||| |||||||||||||||||||| || | | ||||||||||| ||| | |||| | |
|
|
| T |
37594517 |
ttcaaaattaaacaaactagaatatctccatctttcacacaatagttttctttctatcaactttgatagcagtgctgactccatcttacccaaccttgtt |
37594418 |
T |
|
| Q |
362 |
gcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctccaaaaacaacattcatg |
461 |
Q |
| |
|
| ||| |||||||| | | ||||||||||||||||| |||||| | || || || ||| ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
37594417 |
gacttagttttatcttattctaatattaatagttttcctaaattc------caaacacgaaatcttcaaagattagatctctccaataacaacattcatg |
37594324 |
T |
|
| Q |
462 |
ggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttgcaaggagatcttccga |
561 |
Q |
| |
|
|||||| |||||| |||||||||||| | |||||||||||||||||| | |||| | || |||| | |||||||||||||| |||||||||||||| | |
|
|
| T |
37594323 |
ggaaaa-ttcccaaatggtttcataagaagctcttaaactcatggaatgagatttcgtacattgacttgagtttcaacaagttacaaggagatcttccaa |
37594225 |
T |
|
| Q |
562 |
ttccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
||||||||| ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37594224 |
ttccaccttctggcattcaatacttttcactctcaaataacaacttca |
37594177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 625 - 852
Target Start/End: Original strand, 37382975 - 37383202
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| ||||| ||||||| || |||| ||||| |||||||||||||||||||||||||| || |||||| |
|
|
| T |
37382975 |
ttacaggtgctcagtttaagatcaaataaacttcatggcgcaatcacatgctctagcaccaaacatccatttcccaagttgagaatttttgatgtctcta |
37383074 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
| |||||||||| ||| |||||||| ||| | ||||||| |||||||||||||||||||||||||||||| | | | ||||||||| ||||||||||| |
|
|
| T |
37383075 |
acaacaattttattgggcccttgccaacatcgtgcatcaagaattttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtaa |
37383174 |
T |
|
| Q |
825 |
ggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
37383175 |
gtccaattactataatgattctgtggtg |
37383202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 146 - 609
Target Start/End: Complemental strand, 37697030 - 37696568
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || ||||||| ||||| | ||| ||||||||||||||||||||| ||||| | |
|
|
| T |
37697030 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaaccttaccgagttatatttgtcatcaaccaacttgagtggtgttg |
37696931 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || ||| ||| |||| |||||| ||||||| |||||| |||||||| ||| || | | ||||||||| |
|
|
| T |
37696930 |
tggattttcaccaattttcaaaattaaaaaaactatggcatctcgttctttcacacaatacttttcttgctatcaacactgatagcagtgctgactccat |
37696831 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| || ||| | |||||| | | ||||||||||||||||| |||||| |||| | | |||||| ||||||| |||||||||||| |
|
|
| T |
37696830 |
cttacccaaccttgttgacttagaattatctaatgctaatattaatagttttcctaaattcctagcgcaactaccaaatctgcaatcgttagatctctcc |
37696731 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| ||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||| | ||| | || | || ||||||||||||||||| |
|
|
| T |
37696730 |
aacaacaacattcatgggaaaa-ttcccaaatggtttcataagaagctcttaaactcatggaaggacattcaggacttagacctcagtttcaacaagtta |
37696632 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
37696631 |
caaggagatcttccaattccaccttctagcattggatacttttcactctcaaacaacaacttca |
37696568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 146 - 567
Target Start/End: Original strand, 37413107 - 37413527
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||| || | | |
|
|
| T |
37413107 |
ctctctaataacaagttacatggtcattttccaaattcaatatttaaattccaaaatcttacttacttaggtttgtcatcaacaaacttgaacggcgatg |
37413206 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| |||||| | | ||||| || ||| || ||| |||||||| |||||||| | ||| | ||||||||| ||||| ||| || | | |||||||||| |
|
|
| T |
37413207 |
tggactttcatcaattttcaaattttgaaaaactaactttccttgatctttcccgcaacaattttctttctgtcaacattggtagcagtgttgactccat |
37413306 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|||||| | |||| | |||||||||||||||||| ||||||||||||||||| || ||||| || | | | | || ||||||||| |||||||| || |
|
|
| T |
37413307 |
ctcacccaaccttgaatcattatatttatcttctagtaatattaatagttttcctaatttcttcgcacaacttcaaaatctgcaagagttagatctatct |
37413406 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| |||| ||||| |||||| |||| | |||||||||| | | ||||||| || |||||| | | ||| | || | ||||||||||||||||||||| |
|
|
| T |
37413407 |
aataacataattca-aggaaaagttcctaaatggtttcatgagaagctcttacacacatggagggaaattcgacatatcgatctcagtttcaacaagttg |
37413505 |
T |
|
| Q |
546 |
caaggagatcttccgattccac |
567 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
37413506 |
caaggagatcttccaattccac |
37413527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 137 - 609
Target Start/End: Original strand, 37382177 - 37382648
Alignment:
| Q |
137 |
tatctattcctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttga |
236 |
Q |
| |
|
|||||||| ||||| |||||||| || | ||| ||||||||||||||||| | || | ||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
37382177 |
tatctatttctctctaataacaacataaaaggtgattttccaaattcaatatataaattacaaaatctttttgacttaggattgtcatcaaccaacttga |
37382276 |
T |
|
| Q |
237 |
gaggtgtagtagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatat |
336 |
Q |
| |
|
| ||||| || |||||| || | ||||| || | ||| || |||||| |||||||| |||||||| || ||||||||||| |||| || | | |
|
|
| T |
37382277 |
gtggtgttgtggactttcaccaattttcaaattgtaagaagctatttttccttgatctttcccacaatagtttgctttctatcaatattgaaagcagagt |
37382376 |
T |
|
| Q |
337 |
tgactccatctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaatta |
436 |
Q |
| |
|
||||||||||| ||| | |||| ||||||||||||||||| ||||||| ||||||||| ||||||||||| | || | || |||| ||||||| |
|
|
| T |
37382377 |
tgactccatcttacccaaccttgggatattatatttatcttctagtaatattagtagttttcctaaattcttagcacaaaatcaaaatctggtagaatta |
37382476 |
T |
|
| Q |
437 |
gatctctccaaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttc |
536 |
Q |
| |
|
|||||||| |||||||| ||||| |||||| |||| | |||||||||| | | ||||||| || |||||| | | ||| || ||||||||||||||| |
|
|
| T |
37382477 |
gatctctctaaaaacaaaattcaagggaaag-ttcctaaatggtttcatgagaagctcttacacacatggagggacattcaacatgttgatctcagtttc |
37382575 |
T |
|
| Q |
537 |
aacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||||||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
37382576 |
aacaagttgcaaggagatcttccaatcccacgttatggcatttactactttttactctcgaacaacaacttca |
37382648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 146 - 609
Target Start/End: Original strand, 37392743 - 37393199
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||| || ||||| | |
|
|
| T |
37392743 |
ctctcaaataacaacctacatggtcattttccaaattcaatatttgaactccaaaatcttaccaacttagatttgtcttcaacaaacttaagtggtgttg |
37392842 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | ||| ||||||| |||||| | ||||||||||||||| |||| || | | ||||| |||| |
|
|
| T |
37392843 |
tggattttcaccaattttcaaaattaaacagactatggtatctctatctttcacacaatggttttctttctatcaacattgatagcagtgttgacaccat |
37392942 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||||| |||| | ||||| ||||||| | | | ||||||||||||||||| |||||| ||| |||| |||| || |||||||||||| |
|
|
| T |
37392943 |
cttacctaaccttttttcattagatttatcatatgccaatattaatagttttcctaaattccaagcacgaaa------tctggaaagcttagatctctcc |
37393036 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| | ||||||||||| || || |||||| |||||||||||| | ||||||||||||||||||| | ||| ||| |||| || |||||||||||||| |
|
|
| T |
37393037 |
aatagcaacattcatgcgagaa-ttcccaaatggtttcataagaagctcttaaactcatggaaggacattatacacattgacctgagtttcaacaagtta |
37393135 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
37393136 |
caaggtgatcttccaattccacctgatggcattgaagactttttactctcaaacaacaacttca |
37393199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 162 - 609
Target Start/End: Complemental strand, 37702961 - 37702521
Alignment:
| Q |
162 |
tacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaattt |
261 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||| |||||||| ||||| || || ||| || | || |
|
|
| T |
37702961 |
tacatggtcattttccaaattcaatatatgaactccaaaatcttaccaacttagatttgtcgtcaacaaacttgagtggtgtcgtggattttcaccaatt |
37702862 |
T |
|
| Q |
262 |
ttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaat |
361 |
Q |
| |
|
||| || || ||| ||| | || |||| |||||| |||||||| ||| ||||||||||| |||| || | | ||||||||||| ||| | |||| | |
|
|
| T |
37702861 |
ttcaaaattaaaaaaactaaattccctcattctttcacacaatagttttatttctatcaacattgatagcagtgctgactccatcttacccaaccttgtt |
37702762 |
T |
|
| Q |
362 |
gcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctccaaaaacaacattcatg |
461 |
Q |
| |
|
| ||| |||| || ||| | ||||||||||||||||| |||||| ||| || || ||||||| ||||||||||||||| ||| ||||||||| |
|
|
| T |
37702761 |
gacttagatttctcgtctgctaatattaatagttttcctaaattccaagc------acaaaatctgcaaacattagatctctccaataactacattcatg |
37702668 |
T |
|
| Q |
462 |
ggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttgcaaggagatcttccga |
561 |
Q |
| |
|
|||||| |||||| |||||||||||| | |||||||||||||||||| | ||| ||| || | || |||||||| | |||||||||| ||||||| | |
|
|
| T |
37702667 |
ggaaaa-ttcccaaatggtttcataagaaactcttaaactcatggaaggacattatacacattaacctgagtttcaaaatgttgcaaggacatcttccaa |
37702569 |
T |
|
| Q |
562 |
ttccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||| ||||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
37702568 |
ttccacctcatggcattgtacactttttactctcaaacaacaacttca |
37702521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 625 - 852
Target Start/End: Complemental strand, 37435221 - 37434994
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||| ||||| ||||| ||| | ||||| |||||||| ||||||| |
|
|
| T |
37435221 |
ttacaggtactcagtttaagatcaaataaacttaatggttcaatcacctgttctaacaccaaccatcctttttctaagttaagaatttttgacatcttcg |
37435122 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
||||||||||||||| ||||||| ||| |||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
37435121 |
gtaacaattttagtggatccttgccaacatcatgtatcaagaactttcaaggaatgatgaatgtgaatgatagccagattggtttgcaatacatgggtaa |
37435022 |
T |
|
| Q |
825 |
ggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
37435021 |
gaacaattactataatgattctgtggtg |
37434994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 644 - 852
Target Start/End: Complemental strand, 37532592 - 37532384
Alignment:
| Q |
644 |
gatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagtggtcc |
743 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||| || | ||||| |||||||||||||| || |
|
|
| T |
37532592 |
gatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctaacaacaattttagtgggcc |
37532493 |
T |
|
| Q |
744 |
cttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactataatgat |
843 |
Q |
| |
|
|||||| | | ||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||| |||| |||| || |||||||||||||| |
|
|
| T |
37532492 |
cttgccaatatcatgcatcaagaactttaaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgcgggttattactataatgat |
37532393 |
T |
|
| Q |
844 |
tctgtggtg |
852 |
Q |
| |
|
||||||||| |
|
|
| T |
37532392 |
tctgtggtg |
37532384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 644 - 848
Target Start/End: Complemental strand, 37593696 - 37593492
Alignment:
| Q |
644 |
gatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagtggtcc |
743 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||| || | |||| |||||||||||||| || |
|
|
| T |
37593696 |
gatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcc |
37593597 |
T |
|
| Q |
744 |
cttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactataatgat |
843 |
Q |
| |
|
|||||| ||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||| || |||||||||||||| |
|
|
| T |
37593596 |
cttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgtgggttattactataatgat |
37593497 |
T |
|
| Q |
844 |
tctgt |
848 |
Q |
| |
|
||||| |
|
|
| T |
37593496 |
tctgt |
37593492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 644 - 848
Target Start/End: Complemental strand, 37696087 - 37695883
Alignment:
| Q |
644 |
gatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagtggtcc |
743 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||| || | |||| |||||||||||||| || |
|
|
| T |
37696087 |
gatcaaataatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgtttctatcaacaattttagtgggcc |
37695988 |
T |
|
| Q |
744 |
cttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactataatgat |
843 |
Q |
| |
|
|||||| ||| ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||| | | |||||||||||||| |
|
|
| T |
37695987 |
cttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacagccaaattggtttgcaatacaagggtgacggttattactataatgat |
37695888 |
T |
|
| Q |
844 |
tctgt |
848 |
Q |
| |
|
||||| |
|
|
| T |
37695887 |
tctgt |
37695883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 639 - 848
Target Start/End: Complemental strand, 37823401 - 37823192
Alignment:
| Q |
639 |
tttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagt |
738 |
Q |
| |
|
|||| |||||||||| || |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
37823401 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37823302 |
T |
|
| Q |
739 |
ggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactata |
838 |
Q |
| |
|
|| |||||||| ||| ||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||| | | ||||||| | |
|
|
| T |
37823301 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgagtgacgaccaaattggtttgcaatacatgggtgactcttattactaca |
37823202 |
T |
|
| Q |
839 |
atgattctgt |
848 |
Q |
| |
|
|||||||||| |
|
|
| T |
37823201 |
atgattctgt |
37823192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 146 - 609
Target Start/End: Complemental strand, 37533409 - 37532938
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || ||||||||||||| ||||| ||||||||| || ||||| || ||||| | |
|
|
| T |
37533409 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttaccgacttatatttgtcatccacaaacttaagtggtgttg |
37533310 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| || ||| |||||||| || ||||| ||||||||||||||| || | || ||| |||||||||| |
|
|
| T |
37533309 |
tggattttcaccaattttcaaaattaaacaaactaggttcccttgatctttcccataatagttttctttctatcaacattaatagcaatgttgactccat |
37533210 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| || ||| | |||||| | | ||||||||||||||||| |||||| |||| | | |||||| ||||||| |||||||||||| |
|
|
| T |
37533209 |
cttacccaaccttgttgacttagaattatctaatgctaatattaatagttttcctaaattcctagcgcaactaccaaatctgcaatcgttagatctctcc |
37533110 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctctt---------aaactcatggaagtatatttggcacgttgatctcagtttc |
536 |
Q |
| |
|
|| ||||||||||||||| |||||||||| |||||||||||| | |||| | |||||||||||| |||| | || |||| | |||||| |
|
|
| T |
37533109 |
aacaacaacattcatggg-aaaattcccaaatggtttcataagaagctcatggaatgggaaaactcatggaatgggatttcgtacattgacttgagtttc |
37533011 |
T |
|
| Q |
537 |
aacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| ||||||||| |||||||| |||||| || |||||||||| |
|
|
| T |
37533010 |
aacaagttacaaggagatcttccaattccacctgatggcattggatacttttcactctcaaataacaacttca |
37532938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 639 - 848
Target Start/End: Original strand, 37401661 - 37401870
Alignment:
| Q |
639 |
tttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagt |
738 |
Q |
| |
|
|||| |||||||||| || |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
37401661 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37401760 |
T |
|
| Q |
739 |
ggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactata |
838 |
Q |
| |
|
|| |||||||| ||| ||||||||| ||| |||||||||||||||||||||||||| | | | ||||||||| ||||||||| | | ||||||| | |
|
|
| T |
37401761 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactaca |
37401860 |
T |
|
| Q |
839 |
atgattctgt |
848 |
Q |
| |
|
|||||||||| |
|
|
| T |
37401861 |
atgattctgt |
37401870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 639 - 848
Target Start/End: Complemental strand, 37639243 - 37639034
Alignment:
| Q |
639 |
tttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagt |
738 |
Q |
| |
|
|||| |||||||||| || |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
37639243 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37639144 |
T |
|
| Q |
739 |
ggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactata |
838 |
Q |
| |
|
|| |||||||| ||| ||||||||| ||| |||||||||||||||||||||||||| | | | ||||||||| ||||||||| | | ||||||| | |
|
|
| T |
37639143 |
gggcccttgccaacatcatgcatcaagaactttcaaggaatgatgaatgtgaatgacaataacactggtttgcaatacatgggtgactcttattactaca |
37639044 |
T |
|
| Q |
839 |
atgattctgt |
848 |
Q |
| |
|
|||||||||| |
|
|
| T |
37639043 |
atgattctgt |
37639034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 625 - 829
Target Start/End: Original strand, 37393526 - 37393730
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| || | |||| |||||||| | || ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||| || |||||| |
|
|
| T |
37393526 |
ttacaggtgctaagtttacgatcaaatcatcttcatgggtcaatcacatgttctagcaccaagcatccatttcctaagttgagaatttatgatgtctcta |
37393625 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||| ||| ||| ||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||| |
|
|
| T |
37393626 |
gtaacaattttagtggccccttgccaacatcatgcttcaagaactttcaaggaatgatggatgtgaataacagccaaattggtttgcaatacatgggtaa |
37393725 |
T |
|
| Q |
825 |
ggcca |
829 |
Q |
| |
|
|||| |
|
|
| T |
37393726 |
agcca |
37393730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 639 - 794
Target Start/End: Complemental strand, 37711001 - 37710846
Alignment:
| Q |
639 |
tttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagt |
738 |
Q |
| |
|
|||| |||||||||| || |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
37711001 |
tttacgatcaaataatcttcatggtgcaatcacctgttctagcaccaagcatacatttcccaagttgagaatttttgatgtctctaacaacaattttagt |
37710902 |
T |
|
| Q |
739 |
ggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatga |
794 |
Q |
| |
|
|| |||||||| || ||||||||| ||| ||||||||||||||||| |||||||| |
|
|
| T |
37710901 |
gggcccttgccagcatcatgcatcaagaactttcaaggaatgatgaaggtgaatga |
37710846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 146 - 608
Target Start/End: Complemental strand, 37436016 - 37435549
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| || | |||| |||| |||||||||||||| || |||||||||||||| | |||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37436016 |
ctctcaaataacaacctagaaggtcatttttcaaattcaatatttcaactccaaaatcttactgaattagatttgtcatcaacaaacttgagtggtgttg |
37435917 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || ||||| || | | ||||| |||||||||||||||| ||||||||||||||| | | || | | ||||||||| |
|
|
| T |
37435916 |
tggattttcaccaattttcaaaacttaaaaatctaattctcctcaatctttcgcacaatagttttctttctatcaacactaatagcagtgctgactccat |
37435817 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| | ||| ||||||||||| | ||||||||||||||||| |||||| || | || || | ||| ||||||||||||| |
|
|
| T |
37435816 |
cttacccaaccttgagatgttagatttatcttctgctaatattaatagttttcctaaattccacgcacaaaaac------ttcaaacattagatctctcc |
37435723 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacg------------ttgatctcagt |
533 |
Q |
| |
|
|| ||||||||||||||||||| |||||| |||||||||||| | |||||||||| ||| ||| ||||| || | |||| |||||| |
|
|
| T |
37435722 |
aataacaacattcatgggaaaa-ttcccaaatggtttcataagaagctcttaaacacattgaatgatattgcccatgaaattagttacattgacctcagt |
37435624 |
T |
|
| Q |
534 |
ttcaacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttc |
608 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||| | ||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
37435623 |
ttcaacaaattgcaaggagacattccaattccatccgatggcattgaatactttttgctctcaaacaacaacttc |
37435549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 625 - 794
Target Start/End: Complemental strand, 37702194 - 37702025
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| || | |||| |||||||| | || |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||| || ||||| |
|
|
| T |
37702194 |
ttacaggtgctgagtttacgatcaaatcatcttcatggtgcaatcacttgttctagcaccaagcattcatttcctaagttgagaatttttgatgcctcta |
37702095 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatga |
794 |
Q |
| |
|
| |||||||||||||| |||||||| ||| ||||||||| ||| |||||||||||||| ||||| ||||| |
|
|
| T |
37702094 |
acaacaattttagtggccccttgccaacatcatgcatcaagaactttcaaggaatgattaatgtaaatga |
37702025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 37401247 - 37401320
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||| ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37401247 |
caacaactttcaaggagatcttccaattccaccttctggcattcaatacttttcactctcaaataacaacttca |
37401320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 37639657 - 37639584
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||| ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37639657 |
caacaactttcaaggagatcttccaattccaccttctggcattaaatacttttcactctcaaataacaacttca |
37639584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 37711415 - 37711342
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||| ||||||| ||||||||| |||||| || |||||||||| |
|
|
| T |
37711415 |
caacaactttcaaggagatcttccaattccaccttctggcattcaatacttttcactctcaaataacaacttca |
37711342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 625 - 710
Target Start/End: Original strand, 37413814 - 37413899
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaat |
710 |
Q |
| |
|
|||||||| || | |||| |||||||||| || |||||| ||||||| ||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
37413814 |
ttacaggtgctaagtttacgatcaaataatcttcatggtgcaatcacctgttctagcacaaagcatacatttcccaagttgagaat |
37413899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 37594115 - 37594042
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||| |||||||| || ||| ||||||||| |||||||| |||| |
|
|
| T |
37594115 |
caacaactttcaaggagatcttccaattccacctgatggcattaaaaactatttactctcaaacaacaatttca |
37594042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 37696506 - 37696433
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||| |||||||| || ||| ||||||||| |||||||| |||| |
|
|
| T |
37696506 |
caacaattttcaaggagatcttccaattccacctgatggcattaaaaactatttactctcaaacaacaatttca |
37696433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 37640304 - 37640225
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgtcatggttgtatctcaatgataactaactcacagg |
117 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| | |||||| |||| ||| ||| | |||||||| |
|
|
| T |
37640304 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgttagagttgtacctcagtgacaacaatctcacagg |
37640225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 37400540 - 37400585
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37400540 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37400585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37533532 - 37533487
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37533532 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37533487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37594756 - 37594711
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37594756 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37594711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37697219 - 37697174
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37697219 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37697174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37703100 - 37703055
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37703100 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37703055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37824327 - 37824282
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
37824327 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
37824282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 37712056 - 37712011
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
37712056 |
ttaaatggaacaattccacagtggtgttattctttgccttcattgt |
37712011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 104; Significance: 2e-51; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 625 - 852
Target Start/End: Original strand, 16843645 - 16843872
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| ||| ||||| |||| ||||| || ||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
16843645 |
ttacaggtactcgttttacgatctaataatcttcatggagtaatcacttgttctagcaccaagcatccatttcctaagttgagaatttttgatgtctcta |
16843744 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
| |||||||||||||| ||||||| ||| |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||| | |
|
|
| T |
16843745 |
acaacaattttagtggcaccttgccaacatcatgcatccagaactttcaaggaatgatgaatgtggatgatagccagattggtttgcaatacatgggcac |
16843844 |
T |
|
| Q |
825 |
ggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
|| ||||||||| || |||||||||||| |
|
|
| T |
16843845 |
ggacaattactacaacgattctgtggtg |
16843872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 146 - 609
Target Start/End: Original strand, 16842727 - 16843183
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| || | |||||||||||||||||||||| ||||||||||||| | ||| ||| |||||||| |||||||| ||||| | |
|
|
| T |
16842727 |
ctctctaataacaacctacaaggccattttccaaattcaatatttgaactccaaaatcttaccgccctagatttatcatcaacaaacttgagtggtgttg |
16842826 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
345 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | ||||||||||| ||||||| ||||||||||||||| ||| || | | ||||||||| |
|
|
| T |
16842827 |
tggattttcaccaattttcaaaattaaacaaactagggtatctcgatctttcacacaatacttttctttctatcaacactgatagcattgctgactccat |
16842926 |
T |
|
| Q |
346 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattcttagctcgaataccaagtctgcaagaattagatctctcc |
445 |
Q |
| |
|
|| ||| | |||| | ||||| ||||||||| | | ||||||||||||||||| |||||| | || || || ||| ||| ||||||||||||| |
|
|
| T |
16842927 |
cttacccaaccttttttcattagatttatcttatgctaatattaatagttttcctaaattc------caaacacgaaatcttcaaagattagatctctcc |
16843020 |
T |
|
| Q |
446 |
aaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttg |
545 |
Q |
| |
|
|| |||||||||||||| |||| |||||| |||||||||||| | |||||||||| ||||||| | |||||| || ||||||| ||||||||||| ||| |
|
|
| T |
16843021 |
aataacaacattcatggtaaaa-ttcccaaatggtttcataagaagctcttaaacacatggaatgacatttggtacattgatcttagtttcaacaaattg |
16843119 |
T |
|
| Q |
546 |
caaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||||| |||| |||||| |||||||| || ||||||||| ||||| ||||||||||||| |
|
|
| T |
16843120 |
caaggagacattccaattccatcttatggccttcaatacttttcgctctcaaacaacaacttca |
16843183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 625 - 852
Target Start/End: Original strand, 16846313 - 16846539
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
||||| || |||| |||||| ||||||||||| ||||| ||||||| ||||||| ||||||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
16846313 |
ttacatgtactcagtttaaggtcaaataaactttatggttcaatcacatgttctagcaccaagcatccatttccaaa-ttgagaattttggacatcttcg |
16846411 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
||||||| || ||||| || ||||| ||| |||| |||| ||||||||||||||||||||| | |||||||| ||| |||||||||||||||||| || |
|
|
| T |
16846412 |
ataacaaattcagtggaccgttgccaacatcatgtatcaagaattttcaaggaatgatgaacgcgaatgataataaaactggtttgcagtacatgggaaa |
16846511 |
T |
|
| Q |
825 |
ggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
16846512 |
ggtcaattactataatgattctgtggtg |
16846539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 625 - 852
Target Start/End: Original strand, 24218380 - 24218607
Alignment:
| Q |
625 |
ttacaggttctcattttaagatcaaataaactgcatggtacaatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctcta |
724 |
Q |
| |
|
|||||||| |||| |||| |||||||| | || |||||| |||||||||||||| ||||| || ||||||| ||| ||||||||| ||| ||||| |
|
|
| T |
24218380 |
ttacaggtactcagtttacgatcaaatcatcttcatggtggaatcacttgttctagcaccaaacaatcatttccgaagatgagaatttacgatgtctctg |
24218479 |
T |
|
| Q |
725 |
ataacaattttagtggtcccttgccgacaacatgcatcaggaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaa |
824 |
Q |
| |
|
||| ||||| |||| ||| |||| ||| | ||| ||| |||||||||||||||||| |||||||||| | || ||||||||| ||||||||||| |
|
|
| T |
24218480 |
gtaataatttccgtggccccgtgccaacatcttgcctcaagaattttcaaggaatgattaatgtgaatgtcaataaatctggtttgcaatacatgggtaa |
24218579 |
T |
|
| Q |
825 |
ggccaattactataatgattctgtggtg |
852 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
24218580 |
ggccaattattataatgattctgtggtg |
24218607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 424 - 609
Target Start/End: Original strand, 24217869 - 24218053
Alignment:
| Q |
424 |
tctgcaagaattagatctctccaaaaacaacattcatgggaaaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgt |
523 |
Q |
| |
|
|||||||| |||||||||||| || ||||| ||||| || |||| |||| | |||||||||| | | ||||||| || |||||||| | ||| | | |
|
|
| T |
24217869 |
tctgcaaggattagatctctctaataacaaaattcaagg-aaaagttcctaaatggtttcatgagaagctcttacacacatggaaggaaattcgaattat |
24217967 |
T |
|
| Q |
524 |
tgatctcagtttcaacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
24217968 |
taatctcagtttcaacaagttgcaaggagaccttccgattccaccctatggaattcaatacttttcactctcaaacaacaacttca |
24218053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 465 - 609
Target Start/End: Original strand, 16845838 - 16845982
Alignment:
| Q |
465 |
aaaattcccatatggtttcataaaatgctcttaaactcatggaagtatatttggcacgttgatctcagtttcaacaagttgcaaggagatcttccgattc |
564 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||||||| |||||| | ||| | ||| |||| |||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
16845838 |
aaaattccaaaatggtttcataagaagctcttaaactcgtggaaggacattcgacacattgacctcagtttcaacaaattgcaaggagacattccaattc |
16845937 |
T |
|
| Q |
565 |
caccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|| |||||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
16845938 |
catattatggcattaaatactttttgctctcaaacaacaacttca |
16845982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 16843245 - 16843318
Alignment:
| Q |
536 |
caacaagttgcaaggagatcttccgattccaccttatggcattgaatactttttactctctaacaacaacttca |
609 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||| ||||||||| |||||||| |||||| || |||||||||| |
|
|
| T |
16843245 |
caacaattttcaaggagatcttccaattccacctgatggcattgtatacttttcactctcaaataacaacttca |
16843318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 24217468 - 24217513
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| ||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
24217468 |
ttaaatggaacaattccgcaatggtgttattccttgccttcgttgt |
24217513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 16842604 - 16842649
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||| | ||||||||||| ||||||||||||| |
|
|
| T |
16842604 |
ttaaatggaacaattccaaattggtgttattctttgccttcgttgt |
16842649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 88; Significance: 8e-42; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 665 - 840
Target Start/End: Complemental strand, 14552843 - 14552668
Alignment:
| Q |
665 |
caatcacttgttctatgaccaagcatccatttcccaagttgagaattttcgacatctctaataacaattttagtggtcccttgccgacaacatgcatcag |
764 |
Q |
| |
|
||||||| ||||||| | ||||||| ||||||| |||||||||||||| || ||||||| |||||||||||||| ||||||| ||| ||||||||| |
|
|
| T |
14552843 |
caatcacctgttctagcatcaagcattcatttcctaagttgagaatttttgatgtctctaacaacaattttagtggcaccttgccaacatcatgcatcaa |
14552744 |
T |
|
| Q |
765 |
gaattttcaaggaatgatgaatgtgaatgatagccaaattggtttgcagtacatgggtaaggccaattactataat |
840 |
Q |
| |
|
||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||| ||||||||| |
|
|
| T |
14552743 |
gaactttcaaggaatgatgaacgtgaatgacagccaaattggtttgcaatacatgggtaaagccagctactataat |
14552668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 146 - 327
Target Start/End: Complemental strand, 14553419 - 14553238
Alignment:
| Q |
146 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
245 |
Q |
| |
|
||||| |||||||| |||| |||| |||||||||||||||||||||| ||||||||||||| ||||| ||||||||| || |||||||| ||||| | |
|
|
| T |
14553419 |
ctctcaaataacaacctacaaggtcattttccaaattcaatatttgaactccaaaatcttaccgacttatatttgtcatccacaaacttgagtggtgttg |
14553320 |
T |
|
| Q |
246 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttga |
327 |
Q |
| |
|
| || ||| || | ||||| || || ||| ||| | || |||||||||||| |||||||| ||| ||||||||||| |||| |
|
|
| T |
14553319 |
tggattttcaccaattttcaaaattaaaaaaactaaattccctcgatctttcacacaatagttttatttctatcaacattga |
14553238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 14553542 - 14553497
Alignment:
| Q |
38 |
ttaaacggaacaattccacactggtgttattccttgccttcgttgt |
83 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
14553542 |
ttaaatggaacaattccacattggtgttattctttgccttcgttgt |
14553497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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