View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1176_low_23 (Length: 289)
Name: NF1176_low_23
Description: NF1176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1176_low_23 |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0735 (1 HSPs) |
 |  |  |
|
| [»] scaffold0603 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 12798899 - 12798732
Alignment:
| Q |
112 |
tggtttggcctcgtgtcacgagtcacgggtgtctttactcacttgacatgtgctgccaaaaccaaacatactttattgttcgttcacttcttccatgtaa |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12798899 |
tggtttggcctcgtgtcacgagtcacgggtgtctttactcacttgacatgtgctgccaaaaccaaacatactttattgttcgttcacttcttccatgtaa |
12798800 |
T |
 |
| Q |
212 |
gatgccaaatttgagaactttctagacattgctctcttaattaattaaaaaccactctcctagaatta |
279 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12798799 |
gatgccaaatttgagaactttctagacattgctctcttaattaattaaaaaccactctcctagaatta |
12798732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 29108801 - 29108871
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
29108801 |
caattttcaagaaaatatttccttttataattccttaaccagtgtcgcgggagcaccgattaacatttccc |
29108871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 35470336 - 35470406
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |||||||||| | ||||| ||||| |||||||||||| |
|
|
| T |
35470336 |
caattttcaaggaaatatttcctttaataattccttaaccagtgccccggaggcaccggttaacatttccc |
35470406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 12799006 - 12798966
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaacca |
68 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
12799006 |
caattttcgataatatatttccttttataattctttaacca |
12798966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 15658839 - 15658769
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||| |||| ||||||||||||| ||||||| |||| ||||| | |||| ||| |||||||||||||| |
|
|
| T |
15658839 |
caatttccaatgaaatatttcctttaataattccttaatcagtgccccggatgcactgattaacatttccc |
15658769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 29144398 - 29144467
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
29144398 |
caatttccaaaaaaatatttccttttataatttcttaactagtgtctcgg-gacaccgatcaacatttccc |
29144467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 24181492 - 24181449
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
24181492 |
caattttcaatacaatatttccttttataattccttaaccagtg |
24181449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 26296459 - 26296502
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26296459 |
caatttccaatacaatatttccttttataattctttaaccagtg |
26296502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 22732010 - 22732053
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
22732010 |
caattttcaagaaaatatttccttttatgattctttaactagtg |
22732053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 73
Target Start/End: Original strand, 32310887 - 32310916
Alignment:
| Q |
44 |
atttccttttataattctttaaccagtgtc |
73 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
32310887 |
atttccttttataattctttaaccagtgtc |
32310916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 20175264 - 20175228
Alignment:
| Q |
61 |
tttaaccagtgtctcggagacaccgattaacatttcc |
97 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
20175264 |
tttaaccagtgtctcggagacaccggttagcatttcc |
20175228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 185522 - 185571
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcgg |
77 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
185522 |
caattttcaatacaatattttcttttataattccttaaccagtgtctcgg |
185571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 55142368 - 55142436
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttc |
96 |
Q |
| |
|
|||||| ||| ||||||||| |||||||||||||||||||||| | ||| ||||||| |||||||||| |
|
|
| T |
55142368 |
caatttccaaaaaaatattttcttttataattctttaaccagtattccggggacaccggttaacatttc |
55142436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 50662504 - 50662571
Alignment:
| Q |
29 |
aattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttc |
96 |
Q |
| |
|
||||| ||||| ||||||| ||||||||||| |||||||||| ||| ||||||||| |||||||||| |
|
|
| T |
50662504 |
aatttccaatataatattttattttataattccttaaccagtgcctccgagacaccggttaacatttc |
50662571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 53653153 - 53653110
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||||||||| || |||| ||||||||||||||||||||||| |
|
|
| T |
53653153 |
caattttcaatataaaattttcttttataattctttaaccagtg |
53653110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 44362329 - 44362259
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||| ||||||| || | |||||||| | |||||||||||| |
|
|
| T |
44362329 |
caattttcaatacaatatttctttttataattccttaaccactgccccggagacattggttaacatttccc |
44362259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 26491493 - 26491449
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgt |
72 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26491493 |
caatttccaatacaatatttccttttataattctttaactagtgt |
26491449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 7662332 - 7662402
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||| ||| |||||||||||||| |||||| ||||||||| ||| ||| ||||| |||||||||||| |
|
|
| T |
7662332 |
caatttccaaaaaaatatttcctttaataatttcttaaccagtacctcagaggcaccggttaacatttccc |
7662402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 42563230 - 42563188
Alignment:
| Q |
29 |
aattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||| |||| |
|
|
| T |
42563230 |
aattttcaatacaatatttccttttataattccttaactagtg |
42563188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 23722305 - 23722248
Alignment:
| Q |
41 |
aatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
||||||||||||| |||||| |||||||||| | ||| | ||||| |||||||||||| |
|
|
| T |
23722305 |
aatatttccttttctaattccttaaccagtgccccgggggcaccggttaacatttccc |
23722248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 24261401 - 24261365
Alignment:
| Q |
62 |
ttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
24261401 |
ttaaccagtgcctcagagacaccgattaacatttccc |
24261365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 27919172 - 27919214
Alignment:
| Q |
29 |
aattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
27919172 |
aattttcaagaaaatatttccttttataattctttaacaagtg |
27919214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 42888011 - 42887975
Alignment:
| Q |
29 |
aattttcaataaaatatttccttttataattctttaa |
65 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
42888011 |
aattttcaagaaaatatttccttttataattctttaa |
42887975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 43638416 - 43638456
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaacca |
68 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
43638416 |
caattttcaagacaatatttccttttataattccttaacca |
43638456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 9047135 - 9047066
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttcc |
97 |
Q |
| |
|
|||||||||||| || |||||||||||| |||| |||||||||||| ||| |||| | ||||||||||| |
|
|
| T |
9047135 |
caattttcaatacaaaatttccttttatgattccttaaccagtgtcccggggacattggttaacatttcc |
9047066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 24495339 - 24495391
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggaga |
80 |
Q |
| |
|
|||||||||| | ||||||| |||||||||||||||||| |||| |||||||| |
|
|
| T |
24495339 |
caattttcaagataatattttcttttataattctttaacaagtgcctcggaga |
24495391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 8919423 - 8919379
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgt |
72 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
8919423 |
caattttcaaaaaatcatttccttttataattccttaaccagtgt |
8919379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 30898124 - 30898164
Alignment:
| Q |
31 |
ttttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||| |||| |
|
|
| T |
30898124 |
ttttcaagaaaatatttccttttataattccttaacaagtg |
30898164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 1955329 - 1955284
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtc |
73 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||| |||| |
|
|
| T |
1955329 |
caattttcaatacaatattttcttttataattctttaaccaatgtc |
1955284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 47089250 - 47089207
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| |||||||||| |
|
|
| T |
47089250 |
caattttcaagaaaacatttccttttataattccttaaccagtg |
47089207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 49081327 - 49081370
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtg |
71 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||| ||||| |
|
|
| T |
49081327 |
caattttcaaaaaaatatttccttttctaattctttaatcagtg |
49081370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 47742829 - 47742884
Alignment:
| Q |
41 |
aatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| ||| || ||||||||||||||||| |
|
|
| T |
47742829 |
aatatttccttttataattccttaaccaatgtc-cgg-gataccgattaacatttccc |
47742884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 48743504 - 48743459
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtc |
73 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
48743504 |
caatttccaatacaatatttccttttataatttcttaaccagtgtc |
48743459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 7633207 - 7633274
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttc |
96 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| ||||||||| | ||||| ||||| |||||||||| |
|
|
| T |
7633207 |
caattttcaaaaaatcatttccttttataattccttaaccagtcccccggag-caccggttaacatttc |
7633274 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 31314390 - 31314354
Alignment:
| Q |
62 |
ttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
31314390 |
ttaaccagtatctcgaagacaccgattaacatttccc |
31314354 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0735 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0735
Description:
Target: scaffold0735; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 964 - 928
Alignment:
| Q |
29 |
aattttcaataaaatatttccttttataattctttaa |
65 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
964 |
aattttcaagaaaatatttccttttataattctttaa |
928 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 31955693 - 31955638
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacac |
83 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||| || |||||| |
|
|
| T |
31955693 |
caattttcaaataaatatttccttttataatttattaaccagtgtcccgcagacac |
31955638 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 2656469 - 2656424
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtc |
73 |
Q |
| |
|
|||||| ||||| ||||||| |||||||||||| |||||||||||| |
|
|
| T |
2656469 |
caatttccaatataatattttcttttataattccttaaccagtgtc |
2656424 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0603 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0603
Description:
Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 7000 - 6930
Alignment:
| Q |
28 |
caattttcaataaaatatttccttttataattctttaaccagtgtctcggagacaccgattaacatttccc |
98 |
Q |
| |
|
|||||||||| ||| ||||||||||| ||||| ||||| |||||| |||| ||||| |||||||||||| |
|
|
| T |
7000 |
caattttcaagaaatcatttccttttacaattccttaactagtgtcccggaatcaccggttaacatttccc |
6930 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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