View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11771_high_15 (Length: 241)

Name: NF11771_high_15
Description: NF11771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11771_high_15
NF11771_high_15
[»] chr6 (33 HSPs)
chr6 (1-220)||(21610039-21610258)
chr6 (108-189)||(6632643-6632724)
chr6 (111-223)||(29623464-29623576)
chr6 (108-220)||(17914930-17915041)
chr6 (111-223)||(2255721-2255833)
chr6 (111-223)||(6758614-6758726)
chr6 (129-214)||(10730237-10730318)
chr6 (111-189)||(9894753-9894831)
chr6 (111-189)||(30533967-30534045)
chr6 (129-223)||(32165248-32165341)
chr6 (108-220)||(4808556-4808667)
chr6 (108-220)||(10184320-10184431)
chr6 (112-187)||(3211024-3211099)
chr6 (108-206)||(10619213-10619309)
chr6 (119-202)||(24625846-24625929)
chr6 (112-223)||(32615402-32615512)
chr6 (128-226)||(21025211-21025309)
chr6 (111-217)||(21891331-21891437)
chr6 (120-169)||(21215907-21215956)
chr6 (108-220)||(1468160-1468270)
chr6 (148-220)||(5958331-5958403)
chr6 (115-223)||(21871271-21871378)
chr6 (112-187)||(715948-716023)
chr6 (112-171)||(9582495-9582554)
chr6 (128-199)||(10054385-10054456)
chr6 (148-223)||(29052357-29052432)
chr6 (115-222)||(34413311-34413417)
chr6 (128-189)||(2034250-2034311)
chr6 (126-223)||(32675876-32675973)
chr6 (108-213)||(34223522-34223627)
chr6 (111-187)||(2040209-2040285)
chr6 (111-143)||(21609979-21610011)
chr6 (148-220)||(34509936-34510008)
[»] chr5 (53 HSPs)
chr5 (108-223)||(43318987-43319102)
chr5 (128-223)||(29418739-29418834)
chr5 (113-223)||(11991294-11991403)
chr5 (108-223)||(26002981-26003096)
chr5 (128-223)||(28357356-28357451)
chr5 (108-216)||(15122529-15122636)
chr5 (111-191)||(22573640-22573720)
chr5 (128-223)||(29659066-29659159)
chr5 (111-223)||(29922176-29922288)
chr5 (108-202)||(17668384-17668477)
chr5 (111-223)||(1371981-1372092)
chr5 (108-220)||(15413976-15414088)
chr5 (122-189)||(23087800-23087865)
chr5 (147-223)||(38461269-38461345)
chr5 (108-220)||(4728830-4728940)
chr5 (108-220)||(15709882-15709993)
chr5 (109-189)||(40415993-40416073)
chr5 (128-223)||(28625484-28625579)
chr5 (108-218)||(6025977-6026086)
chr5 (108-189)||(7565288-7565372)
chr5 (111-189)||(10537240-10537318)
chr5 (108-217)||(20458551-20458659)
chr5 (108-220)||(780558-780669)
chr5 (115-223)||(12987001-12987109)
chr5 (115-223)||(13060589-13060697)
chr5 (111-191)||(17128265-17128345)
chr5 (111-187)||(22201959-22202035)
chr5 (128-218)||(28357142-28357235)
chr5 (108-215)||(33667388-33667494)
chr5 (111-213)||(1473343-1473445)
chr5 (108-202)||(33757072-33757165)
chr5 (113-223)||(42852011-42852120)
chr5 (108-182)||(9477292-9477362)
chr5 (126-223)||(17657244-17657341)
chr5 (112-189)||(24030203-24030280)
chr5 (154-223)||(41419531-41419600)
chr5 (129-217)||(41534628-41534716)
chr5 (108-187)||(2531310-2531388)
chr5 (111-222)||(2878665-2878775)
chr5 (108-219)||(5203425-5203535)
chr5 (128-222)||(13625508-13625603)
chr5 (128-187)||(40697005-40697064)
chr5 (111-189)||(341977-342055)
chr5 (113-223)||(1576620-1576729)
chr5 (113-223)||(1608086-1608195)
chr5 (111-193)||(2670062-2670144)
chr5 (111-141)||(41125691-41125721)
chr5 (126-223)||(6125289-6125385)
chr5 (112-189)||(11163290-11163367)
chr5 (163-219)||(6144777-6144833)
chr5 (129-189)||(12467269-12467329)
chr5 (111-143)||(29657985-29658017)
chr5 (148-223)||(40452464-40452540)
[»] chr1 (55 HSPs)
chr1 (108-223)||(49971235-49971350)
chr1 (108-223)||(15631888-15632003)
chr1 (129-222)||(41576383-41576476)
chr1 (108-218)||(5243396-5243505)
chr1 (108-220)||(12256591-12256702)
chr1 (108-220)||(17814175-17814286)
chr1 (111-223)||(32497259-32497370)
chr1 (108-223)||(17628412-17628526)
chr1 (108-218)||(5347139-5347248)
chr1 (108-202)||(5610490-5610586)
chr1 (121-222)||(26542970-26543071)
chr1 (111-223)||(26435162-26435273)
chr1 (108-223)||(15791368-15791482)
chr1 (108-223)||(35275885-35276001)
chr1 (108-218)||(51162253-51162363)
chr1 (111-212)||(20169251-20169352)
chr1 (148-223)||(15515334-15515409)
chr1 (112-223)||(35590118-35590229)
chr1 (148-223)||(41196697-41196772)
chr1 (108-202)||(42363586-42363678)
chr1 (121-187)||(9178026-9178094)
chr1 (111-223)||(9572771-9572884)
chr1 (111-222)||(26946092-26946204)
chr1 (115-187)||(35897646-35897718)
chr1 (154-222)||(42591412-42591480)
chr1 (111-222)||(46500988-46501100)
chr1 (112-223)||(4068103-4068214)
chr1 (108-217)||(29333401-29333510)
chr1 (112-189)||(37148114-37148191)
chr1 (112-189)||(37156939-37157016)
chr1 (113-189)||(41003376-41003453)
chr1 (147-212)||(47413395-47413460)
chr1 (112-220)||(3116052-3116159)
chr1 (115-223)||(13038938-13039046)
chr1 (118-222)||(35282582-35282686)
chr1 (114-218)||(36259283-36259387)
chr1 (148-219)||(6337747-6337818)
chr1 (122-189)||(10082248-10082315)
chr1 (148-223)||(16888953-16889027)
chr1 (128-223)||(22593394-22593489)
chr1 (148-223)||(37329399-37329474)
chr1 (115-217)||(18327515-18327617)
chr1 (112-189)||(10365159-10365236)
chr1 (108-189)||(13412474-13412554)
chr1 (108-189)||(16225493-16225573)
chr1 (115-220)||(28122607-28122712)
chr1 (128-197)||(51409720-51409789)
chr1 (151-223)||(3069841-3069913)
chr1 (128-220)||(22103115-22103205)
chr1 (111-143)||(22593337-22593369)
chr1 (114-222)||(25485738-25485846)
chr1 (148-220)||(26988172-26988244)
chr1 (111-223)||(46689537-46689649)
chr1 (151-223)||(48819326-48819398)
chr1 (154-218)||(50919517-50919581)
[»] chr3 (34 HSPs)
chr3 (108-214)||(10448758-10448864)
chr3 (108-223)||(28741201-28741316)
chr3 (108-223)||(29614178-29614292)
chr3 (112-223)||(53218027-53218138)
chr3 (108-223)||(4257287-4257403)
chr3 (111-189)||(40581098-40581176)
chr3 (108-211)||(2086690-2086793)
chr3 (108-223)||(3645287-3645401)
chr3 (108-223)||(20894487-20894601)
chr3 (111-219)||(34707704-34707812)
chr3 (128-223)||(52021250-52021346)
chr3 (151-202)||(37243493-37243544)
chr3 (129-220)||(38524093-38524184)
chr3 (115-218)||(22809185-22809289)
chr3 (135-223)||(53787739-53787827)
chr3 (114-213)||(11528881-11528980)
chr3 (108-187)||(29830793-29830872)
chr3 (128-186)||(43376701-43376757)
chr3 (148-219)||(52421132-52421203)
chr3 (121-222)||(10667395-10667496)
chr3 (150-222)||(10521180-10521252)
chr3 (109-161)||(28623283-28623335)
chr3 (111-223)||(29270348-29270460)
chr3 (128-216)||(43079928-43080016)
chr3 (108-174)||(24841423-24841489)
chr3 (108-166)||(30499950-30500008)
chr3 (112-169)||(10272110-10272167)
chr3 (151-220)||(20174930-20174999)
chr3 (121-189)||(24842127-24842196)
chr3 (108-189)||(36266228-36266309)
chr3 (112-220)||(585008-585116)
chr3 (129-189)||(5129836-5129896)
chr3 (121-223)||(37778134-37778232)
chr3 (131-223)||(42956166-42956258)
[»] chr7 (44 HSPs)
chr7 (108-223)||(22032746-22032861)
chr7 (108-223)||(47654401-47654516)
chr7 (108-220)||(22575570-22575682)
chr7 (108-219)||(14675951-14676061)
chr7 (111-220)||(16958803-16958911)
chr7 (108-220)||(19913929-19914041)
chr7 (148-223)||(14691286-14691361)
chr7 (108-215)||(35809074-35809181)
chr7 (111-189)||(44613494-44613572)
chr7 (115-219)||(29390542-29390645)
chr7 (108-223)||(23137150-23137264)
chr7 (128-202)||(43818887-43818959)
chr7 (111-189)||(41677361-41677439)
chr7 (111-220)||(16932920-16933028)
chr7 (111-220)||(16938303-16938411)
chr7 (128-220)||(29378649-29378741)
chr7 (108-223)||(35246656-35246768)
chr7 (111-187)||(40629440-40629515)
chr7 (108-223)||(991484-991598)
chr7 (111-222)||(23119908-23120019)
chr7 (112-223)||(23356478-23356589)
chr7 (111-222)||(48021636-48021746)
chr7 (112-222)||(48949708-48949818)
chr7 (120-222)||(43391717-43391819)
chr7 (129-223)||(44799409-44799501)
chr7 (111-160)||(12473193-12473242)
chr7 (108-189)||(28004568-28004648)
chr7 (128-189)||(30094752-30094813)
chr7 (108-223)||(1312098-1312212)
chr7 (121-220)||(2194032-2194133)
chr7 (108-187)||(24371430-24371508)
chr7 (111-202)||(30181537-30181628)
chr7 (128-217)||(9024769-9024858)
chr7 (163-213)||(18855267-18855317)
chr7 (119-189)||(34922926-34922996)
chr7 (111-189)||(38372545-38372623)
chr7 (128-214)||(47511047-47511133)
chr7 (111-187)||(19496345-19496422)
chr7 (115-160)||(21249147-21249192)
chr7 (116-189)||(31613686-31613759)
chr7 (149-218)||(47862746-47862815)
chr7 (121-213)||(14536880-14536971)
chr7 (167-219)||(18251515-18251566)
chr7 (121-213)||(21027510-21027602)
[»] chr4 (51 HSPs)
chr4 (108-220)||(52700534-52700645)
chr4 (108-222)||(42617218-42617331)
chr4 (108-223)||(19725277-19725392)
chr4 (129-220)||(26206344-26206435)
chr4 (112-223)||(4603319-4603429)
chr4 (108-220)||(22117338-22117449)
chr4 (111-223)||(29877626-29877738)
chr4 (108-220)||(46175969-46176080)
chr4 (108-223)||(15184531-15184645)
chr4 (111-189)||(212969-213046)
chr4 (108-213)||(10794907-10795011)
chr4 (108-213)||(10796370-10796474)
chr4 (121-220)||(15179815-15179913)
chr4 (111-222)||(43415277-43415388)
chr4 (108-220)||(2702705-2702817)
chr4 (111-223)||(46704257-46704368)
chr4 (111-189)||(43699504-43699582)
chr4 (111-220)||(35124374-35124483)
chr4 (148-220)||(17222853-17222925)
chr4 (128-220)||(22397295-22397387)
chr4 (111-218)||(18424270-18424376)
chr4 (114-217)||(27368145-27368248)
chr4 (128-219)||(28074369-28074459)
chr4 (128-223)||(36740908-36741003)
chr4 (112-223)||(47202814-47202924)
chr4 (128-223)||(48591411-48591506)
chr4 (128-222)||(896974-897068)
chr4 (126-212)||(39932752-39932838)
chr4 (111-189)||(41228890-41228968)
chr4 (111-188)||(23297425-23297502)
chr4 (135-220)||(35010222-35010307)
chr4 (154-202)||(2494408-2494456)
chr4 (154-218)||(4398198-4398262)
chr4 (112-143)||(34633387-34633418)
chr4 (112-143)||(42611935-42611966)
chr4 (128-223)||(52274107-52274202)
chr4 (111-189)||(1374384-1374462)
chr4 (111-189)||(3564207-3564285)
chr4 (165-223)||(18630882-18630940)
chr4 (111-189)||(40699343-40699421)
chr4 (129-223)||(46650276-46650370)
chr4 (121-166)||(19298178-19298223)
chr4 (108-161)||(19414113-19414166)
chr4 (149-213)||(2405213-2405276)
chr4 (128-220)||(7148776-7148868)
chr4 (111-223)||(7206573-7206685)
chr4 (154-222)||(8601231-8601299)
chr4 (111-143)||(9319043-9319075)
chr4 (112-189)||(12495665-12495744)
chr4 (111-143)||(31736453-31736485)
chr4 (151-223)||(39931531-39931602)
[»] chr2 (42 HSPs)
chr2 (111-223)||(38471778-38471890)
chr2 (108-187)||(8441457-8441536)
chr2 (108-220)||(32366134-32366245)
chr2 (111-223)||(33321299-33321411)
chr2 (108-187)||(35515503-35515582)
chr2 (111-223)||(38216010-38216118)
chr2 (108-218)||(27880989-27881099)
chr2 (151-223)||(735991-736063)
chr2 (108-220)||(2401612-2401723)
chr2 (113-189)||(15155802-15155878)
chr2 (115-223)||(21788448-21788556)
chr2 (108-220)||(22898347-22898458)
chr2 (112-223)||(29774733-29774844)
chr2 (129-219)||(8342991-8343080)
chr2 (133-222)||(12267005-12267095)
chr2 (126-223)||(4004821-4004918)
chr2 (112-189)||(33321424-33321501)
chr2 (111-223)||(4026913-4027024)
chr2 (119-223)||(25836699-25836803)
chr2 (108-220)||(32522036-32522147)
chr2 (29-84)||(34504940-34504995)
chr2 (121-223)||(11776981-11777083)
chr2 (111-189)||(34913411-34913489)
chr2 (111-223)||(755728-755841)
chr2 (148-223)||(36501502-36501577)
chr2 (111-218)||(37409630-37409737)
chr2 (148-223)||(39592273-39592348)
chr2 (108-187)||(40301336-40301414)
chr2 (128-220)||(12238476-12238565)
chr2 (108-189)||(2757092-2757171)
chr2 (108-189)||(24439003-24439084)
chr2 (111-218)||(4090476-4090583)
chr2 (111-212)||(2790068-2790170)
chr2 (114-160)||(7480952-7480998)
chr2 (111-217)||(9140723-9140828)
chr2 (154-220)||(42064881-42064947)
chr2 (111-223)||(5516062-5516175)
chr2 (151-223)||(12223879-12223951)
chr2 (154-218)||(16108114-16108178)
chr2 (121-189)||(17531946-17532013)
chr2 (111-143)||(27703525-27703557)
chr2 (154-222)||(39070843-39070911)
[»] chr8 (43 HSPs)
chr8 (108-223)||(38338838-38338952)
chr8 (108-189)||(34545629-34545708)
chr8 (108-185)||(37966216-37966293)
chr8 (108-191)||(2019668-2019751)
chr8 (112-223)||(11988185-11988295)
chr8 (108-223)||(12607064-12607178)
chr8 (112-223)||(19327855-19327965)
chr8 (128-223)||(28280713-28280808)
chr8 (111-214)||(32924208-32924311)
chr8 (108-223)||(42102091-42102205)
chr8 (108-223)||(42363304-42363418)
chr8 (111-189)||(16706121-16706199)
chr8 (108-220)||(43577205-43577317)
chr8 (108-223)||(19925541-19925656)
chr8 (108-223)||(38195471-38195585)
chr8 (148-223)||(29218238-29218315)
chr8 (108-189)||(2563342-2563423)
chr8 (151-220)||(9782210-9782279)
chr8 (108-189)||(14942408-14942489)
chr8 (108-220)||(19925379-19925490)
chr8 (148-220)||(24350509-24350581)
chr8 (150-218)||(24866943-24867011)
chr8 (148-216)||(35168435-35168503)
chr8 (108-220)||(37410903-37411014)
chr8 (112-222)||(16972344-16972455)
chr8 (148-222)||(38895683-38895757)
chr8 (108-220)||(30973973-30974085)
chr8 (111-187)||(32131427-32131503)
chr8 (129-220)||(218244-218333)
chr8 (129-220)||(694804-694893)
chr8 (129-220)||(699013-699102)
chr8 (129-220)||(731867-731956)
chr8 (129-220)||(855763-855852)
chr8 (111-220)||(8216893-8217004)
chr8 (115-189)||(3641212-3641285)
chr8 (115-189)||(4326234-4326308)
chr8 (128-218)||(14724957-14725046)
chr8 (151-220)||(2669675-2669744)
chr8 (129-189)||(1089018-1089078)
chr8 (148-220)||(9131118-9131190)
chr8 (112-160)||(13131418-13131466)
chr8 (111-143)||(16706030-16706062)
chr8 (128-188)||(28879062-28879122)
[»] scaffold1088 (1 HSPs)
scaffold1088 (108-220)||(1278-1390)
[»] scaffold0012 (1 HSPs)
scaffold0012 (122-220)||(178498-178597)
[»] scaffold0048 (1 HSPs)
scaffold0048 (111-222)||(58856-58967)
[»] scaffold0332 (1 HSPs)
scaffold0332 (148-223)||(14733-14808)
[»] scaffold1367 (1 HSPs)
scaffold1367 (113-223)||(1047-1157)
[»] scaffold0512 (1 HSPs)
scaffold0512 (151-221)||(4092-4161)
[»] scaffold0004 (1 HSPs)
scaffold0004 (151-220)||(227733-227803)
[»] scaffold0006 (1 HSPs)
scaffold0006 (108-189)||(279013-279093)
[»] scaffold0191 (1 HSPs)
scaffold0191 (111-143)||(31252-31284)
[»] scaffold0157 (1 HSPs)
scaffold0157 (112-189)||(24733-24812)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21610258 - 21610039
Alignment:
Q  1 cttttctcctccaagcttgaggaaaattgaaggaagattcaagtcattgaaaagttcttggtgaagaatgctcatggaatgcttaaaaacataaacattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21610258 cttttctcctccaagcttgaggaaaattgaaggaagattcaagtcattgaaaagttcttggtgaagaatgctcatggaatgcttaaaaacataaacattt 21610159  T
Q  101 gaagacattagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatg 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  21610158 gaagacattagagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatg 21610059  T
Q  201 aatatataattttcgttagt 220  Q
    ||||||||||||||||||||    
T  21610058 aatatataattttcgttagt 21610039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 6632643 - 6632724
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||| |||||||||||||||||||||||||   |||||||||||||| ||| |||||||||||||||||||||||    
T  6632643 ttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaa 6632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 29623576 - 29623464
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||||||||||||||||||||    ||||| |||||||| | || |||||||||||||||||||||| | |  ||||||| ||| | |    
T  29623576 gagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaagt 29623477  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  29623476 tttcgttagtgag 29623464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 17914930 - 17915041
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || | ||||||| |||     
T  17914930 ttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaaaatgggttatgaaaatac 17915028  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  17915029 aattttcgttagt 17915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 2255721 - 2255833
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||| ||||||||||||||||     ||||||||| |||  |||||||||||| ||| |||||||||| | || ||||||| ||| |||    
T  2255721 gagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaat 2255820  T
Q  211 tttcgttagtgag 223  Q
    ||| | |||||||    
T  2255821 ttttggtagtgag 2255833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 6758614 - 6758726
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||||||||||||||||||||    ||| | ||||||   |||||||||||| ||||||||||||||  ||  |||| || ||| ||     
T  6758614 gagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaa 6758713  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  6758714 tttcgttagtgag 6758726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 10730318 - 10730237
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||||||||||||||||    ||||||||||| ||| ||||||||||||||||||||||| | ||||||| ||  ||||||||||    
T  10730318 ttatgcaaataaatattt----atgtattatttataaacttgttaatgtagtttatgaaaaaacagtttataaaagtataattttc 10730237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 9894753 - 9894831
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||| ||||||| |||| ||||||||||| |  |||||||||||||| |||| ||||||| ||| ||||||||||    
T  9894753 gagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaa 9894831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 30533967 - 30534045
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||| ||||||||| ||||||||||||||||    |||||||||||||  |||| |||| |||||||||||||||||    
T  30533967 gagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaa 30534045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 32165341 - 32165248
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  32165341 ttatgaaaataaataagtttttatgtattatttataatttt-ttaaagtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgag 32165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 4808556 - 4808667
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||||||||||||   | || ||||||||||| |||| || ||||  ||||||||||||| | |||||||||| |||     
T  4808556 ttagagcttatataaaacagcttatgcaaataaatgagttttcatgtattatttataagttt-ttaagatagtttatgaaaaaacagtttatgaagatac 4808654  T
Q  208 aattttcgttagt 220  Q
    ||| |||||||||    
T  4808655 aatattcgttagt 4808667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 10184431 - 10184320
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | ||||| |||||||| |||| || |||| |||||||||||||| | | |||||||| | |     
T  10184431 ttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataag-tttttaaggtagtttatgaaaaaacaatttatgaagaaac 10184333  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  10184332 aattttcgttagt 10184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 3211099 - 3211024
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    ||||| ||||||||| ||||||||||||||||    ||||||||||| |  ||||||||| |||||||||||||||    
T  3211099 agcttgtgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaa 3211024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 10619213 - 10619309
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatata 206  Q
    |||||||||||| ||| || |||||||||||||||   |  | |||||||||||||||| ||||||| |||||||||||||| | |  |||||||||||    
T  10619213 ttagagcttatgtaaagcagcttatgcaaataaatgcat--taatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaacttatgaatata 10619309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 24625846 - 24625929
Alignment:
Q  119 gcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||| ||||| ||||||||||||||    |||||||||||||  |||||||||||| ||||||||||||||  ||| |||||||    
T  24625846 gcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaa 24625929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 32615512 - 32615402
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||  |||||| ||||||||||||||||  | |||||||||||||| |||  || |||| |||||| ||||||| |   |||||||| ||| ||||    
T  32615512 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-atttttaaggtagttgatgaaaaaactatttatgaagatacaatt 32615414  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  32615413 ttcgttagtgag 32615402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 21025309 - 21025211
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgagtga 226  Q
    ||||||||||||||||    ||||||||||||   |||||||||||| |||||||||||||| | ||  |||||| ||| ||| ||||||| |||||||    
T  21025309 cttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaatgttcgttactgagtga 21025211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 21891437 - 21891331
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||| || | ||||||||||||||||  | || || |||||||  ||||||||| ||||||||||||||||  | |  ||||||| ||| |||    
T  21891437 gagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagatagaat 21891338  T
Q  211 tttcgtt 217  Q
    |||||||    
T  21891337 tttcgtt 21891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 21215956 - 21215907
Alignment:
Q  120 caaaacaacttatgcaaataaatatttctttatgtattatttgtaagctt 169  Q
    ||||||||||||| ||||||||||| ||||||||| |||||| |||||||    
T  21215956 caaaacaacttatacaaataaatatgtctttatgttttatttataagctt 21215907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 1468160 - 1468270
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| | ||||||||||||||||  | |||||||||||||| | || || |||| |||||||||||||| | |||||||||| | |     
T  1468160 ttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaa-acagtttatgaagaaac 1468257  T
Q  208 aattttcgttagt 220  Q
     ||||||||||||    
T  1468258 cattttcgttagt 1468270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 5958403 - 5958331
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||| || | ||||  |||||||||||||||| ||||||||| || ||| | |||||||||||    
T  5958403 tttatgtattatttatatgtttgtcgatgtagtttatgaaaaaatagtttataaaaatacatttttcgttagt 5958331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 21871378 - 21871271
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||| |||||||||||||||||||| ||    |||||||||||||  ||| ||||| || ||||||||||| ||  ||| ||||||  || ||||||||    
T  21871378 ttatgtaaaacaacttatgcaaataagtaaacttttatgtattattgataa-cttgtcaaggtagtttatgagaaagtagcttatgatgatttaattttc 21871280  T
Q  215 gttagtgag 223  Q
    |||||||||    
T  21871279 gttagtgag 21871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 716023 - 715948
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||| ||||||||| |||||||||  | | |||||||||||| ||| ||||| || || |||||||||    
T  716023 agcttatgcaaatcaacttatgtaaataaataagtttctatgtattatttataaacttgtaaaggtggtttatgaa 715948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 9582554 - 9582495
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt 171  Q
    |||||||||| || ||||||||||||||||||  | |||||||||||||| ||| |||||    
T  9582554 agcttatgcagaataacttatgcaaataaataaatttttatgtattatttataaccttgt 9582495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 10054385 - 10054456
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttat 199  Q
    ||||||||||||||||    |||||||||||||  |||| |||| ||||||||||||||||| ||| |||||    
T  10054385 cttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaataatttat 10054456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 29052357 - 29052432
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||| |||| ||||||| ||| |||||||||| | |||||||||  ||| |||| ||||| |||||    
T  29052357 tttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtttgtgag 29052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 34413311 - 34413417
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    |||| ||||||| |||| | |||||||||  | |||||||||||||| |||| |||| ||||||||||||||||| | | ||||| || ||| ||||||     
T  34413311 ttattcaaaacagcttaggaaaataaatagat-tttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaatttta 34413409  T
Q  215 gttagtga 222  Q
     |||||||    
T  34413410 tttagtga 34413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 2034311 - 2034250
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||||    |||||||||||||| |||| |||| || ||||||||||||||    
T  2034311 cttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaa 2034250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 32675973 - 32675876
Alignment:
Q  126 aacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||||    ||||| |||||||  |||||||  ||| || ||||||||||| |||  ||||||| ||| ||||||| ||||||||    
T  32675973 aacttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgag 32675876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 34223627 - 34223522
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||| |||||  ||||||||||||| |||||||||  | ||||||| |||||| |||| ||||| || || | ||| |||| | |||||||||| |||     
T  34223627 ttagaacttatataaaacaacttatgaaaataaataagtttttatgtgttatttataagtttgtttatatattctataaaaaaacagtttatgaagatac 34223528  T
Q  208 aatttt 213  Q
    ||||||    
T  34223527 aatttt 34223522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 2040285 - 2040209
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    ||||||||||||||||||||||  |||||||||    ||||| |||||||  |||| ||||||| ||| ||||||||    
T  2040285 gagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 21609979 - 21610011
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||||||||||| |||||||||||||||    
T  21609979 gagcttatgcaaaacaatttatgcaaataaata 21610011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 34509936 - 34510008
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||  |||| |||| |||| ||||||||| || | |||||||||| ||||||||  |||||||    
T  34509936 tttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagatataattcccgttagt 34510008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 43318987 - 43319102
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||  |||    
T  43318987 ttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtat 43319086  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  43319087 aattttcgttagtgag 43319102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 29418834 - 29418739
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||| |||||||||||||||| ||||| || |||||||||||||||||| | | ||||||||  || ||||||||||||||||    
T  29418834 cttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgag 29418739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 11991294 - 11991403
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    ||||||||||||||||||||| |||||||||    |||||||||||||| ||||||||| ||| | ||||||||||| |||| ||||||| ||| |||||    
T  11991294 gcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaatag-ttatgaacatacaattt 11991392  T
Q  213 tcgttagtgag 223  Q
    |||||||||||    
T  11991393 tcgttagtgag 11991403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 26002981 - 26003096
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| |||||||  |||||||||||||||  | |||||||||||||| |||| |||||||  || ||||||||||  | ||||||||| |||     
T  26002981 ttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatgaagatac 26003080  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  26003081 aattttcgttagtgag 26003096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 28357356 - 28357451
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||||  || |||||||||||| |||| |||||||||||||||||||||| | ||||||||||  |  ||||||||||||||||    
T  28357356 cttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgag 28357451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 15122529 - 15122636
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  ||||||||||||||||| |||||  | |||||||||||||| |||| || |||| |||||||||||||| | |||||||||| |||     
T  15122529 ttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacagtttatgaagatac 15122627  T
Q  208 aattttcgt 216  Q
    |||||||||    
T  15122628 aattttcgt 15122636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 22573640 - 22573720
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaata 191  Q
    ||||||||||||||||||||||||||||||||   | ||| |||||||||| |||| |||| |||||||||||||||||||    
T  22573640 gagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaata 22573720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 29659066 - 29659159
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||| ||||| | ||||||||||  || ||||||| ||||||||    
T  29659066 cttatgcaaataaatatgt--ttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgag 29659159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 29922288 - 29922176
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||  |||||||||||||||  | |||||||||||||  ||||||||| || |||||||||||||| | || ||||| ||||| |||    
T  29922288 gagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatacaat 29922189  T
Q  211 tttcgttagtgag 223  Q
    |||  ||||||||    
T  29922188 tttttttagtgag 29922176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 17668384 - 17668477
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||||||||||  |||||||||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || |||||||||    
T  17668384 ttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataag-tttttaaggtagtttatgaaaaaatcgtttatgaa 17668477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 1372092 - 1371981
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||  ||||| |||||||||    |||||||||||||| ||||||||| ||||| ||||||||||| | |||| ||||| || ||||    
T  1372092 gagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaa-acagttgatgaagatttaat 1371994  T
Q  211 tttcgttagtgag 223  Q
    |||||||| ||||    
T  1371993 tttcgttaatgag 1371981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 15413976 - 15414088
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||||| ||||||||||||||||  | || ||||||||||  |||| ||||||| ||||||||  |||| | |  |||||||||||     
T  15413976 ttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaatatac 15414075  T
Q  208 aattttcgttagt 220  Q
    |||||| ||||||    
T  15414076 aatttttgttagt 15414088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 23087865 - 23087800
Alignment:
Q  122 aaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||||||||||||| |||||||||||||    
T  23087865 aaacaacttatgcaaataaatgttt--ttatgtattatttataagcttgttaatatagtttatgaaaa 23087800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 38461345 - 38461269
Alignment:
Q  147 ctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||| |||| |||| |||||| |||||||||| | |||||||||| |||||||||| |||||||||    
T  38461345 ctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgag 38461269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 4728830 - 4728940
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||| |  ||| || |||| |||||||||||||| | |||||||||| ||||    
T  4728830 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatctacaag-tttttaaggtagtttatgaaaaaacagtttatgaa-atat 4728927  T
Q  208 aattttcgttagt 220  Q
    ||||||| |||||    
T  4728928 aattttccttagt 4728940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 15709993 - 15709882
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||||||||||||||||||||  | ||| |||||||||| |||| || |||| |||||||||||||| || ||| ||| | |||     
T  15709993 ttagagcttatataaaacaacttatgcaaataaataagtttttctgtattatttataag-tttttaaagtagtttatgaaaaaatcgttaatgtagatac 15709895  T
Q  208 aattttcgttagt 220  Q
    ||||||| |||||    
T  15709894 aattttcattagt 15709882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 40416073 - 40415993
Alignment:
Q  109 tagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||||||||||||||||||| ||    || ||||||||||| |||| ||||||| |||||| |||||||    
T  40416073 tagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaa 40415993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 28625484 - 28625579
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||    |||| ||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||||||||||||||    
T  28625484 cttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgag 28625579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 6026086 - 6025977
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| ||||| |  |||||||||||||||| | |||||||||||||| |||  ||||||| |||||||||||||| |  |||||| || |||     
T  6026086 ttagagcttatacaaaatagtttatgcaaataaatatgt-tttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatac 6025988  T
Q  208 aattttcgtta 218  Q
    |||||| ||||    
T  6025987 aatttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 7565372 - 7565288
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtat---tatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||| ||||||||||||| ||||||||||||||   |||||||||   ||||| |||||||||||| ||||||||| ||||    
T  7565372 ttagagctaatgcaaaacaactgatgcaaataaatatgcttttatgtattattatttataagcttgttaacgtagtttataaaaa 7565288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 10537318 - 10537240
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||| |||||| ||||||||||||||||    |||||||||||||| ||||||||| ||  |||||||||||||    
T  10537318 gagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaa 10537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 20458659 - 20458551
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| ||||||||| |||| ||   ||||||| |||     
T  20458659 ttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttataaaaaaatgtgttatgaaaatac 20458561  T
Q  208 aattttcgtt 217  Q
    ||||||||||    
T  20458560 aattttcgtt 20458551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 780669 - 780558
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  ||||||  |||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || | |||| || |||     
T  780669 ttagagcttatataaaacagtttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaaaatgggttatcaaaatac 780571  T
Q  208 aattttcgttagt 220  Q
    ||||||| |||||    
T  780570 aattttcattagt 780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 12987109 - 12987001
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||| |||| ||||||||||||||||||    |||||||||| ||  ||||||||| || |||||||||||||| | ||||||||||  ||  |||||     
T  12987109 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccattttt 12987010  T
Q  215 gttagtgag 223  Q
    |||||||||    
T  12987009 gttagtgag 12987001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 13060697 - 13060589
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||| |||| ||||||||||||||||||    |||||||||| ||  ||||||||| || |||||||||||||| | || |||||||  ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  215 gttagtgag 223  Q
    |||||||||    
T  13060597 gttagtgag 13060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 17128265 - 17128345
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaata 191  Q
    |||||||||||||||| ||||||||||||||||    |||||||||||||  ||| ||| | || ||||||||||||||||    
T  17128265 gagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaata 17128345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 22202035 - 22201959
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||| |||||| |||||||||    |||||||||||||  ||||||||| || ||||||||||||    
T  22202035 gagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 28357142 - 28357235
Alignment:
Q  128 cttatgcaaataaata---tttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||||||||||    ||| ||| ||||||||||  |||||||| ||||||||||||||||| | || ||||||| ||| |||||||||||    
T  28357142 cttatgcaaataaatgagttttttttttgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtta 28357235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 33667494 - 33667388
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | ||||||||||||||  ||| || |||| ||||||||||| || ||||| |||||| |||     
T  33667494 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttacaag-tttttaaggtagtttatgacaaaatagtatatgaagatac 33667396  T
Q  208 aattttcg 215  Q
     |||||||    
T  33667395 gattttcg 33667388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 1473343 - 1473445
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||| || |||||||||||||||||||||    |||||||||||||  ||||||||| ||  || |||||||||| | || ||||||| ||| |||    
T  1473343 gagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaat 1473442  T
Q  211 ttt 213  Q
    |||    
T  1473443 ttt 1473445  T

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Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 33757072 - 33757165
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || ||||  ||||||||||||| | |||| |||||    
T  33757072 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataag-tttttaagctagtttatgaaaaaacagttaatgaa 33757165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 42852011 - 42852120
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    |||||||||||||| ||||| ||||||||||    |||||||||||||  ||||||||| ||  ||||||||||||| | |  |||| || ||| |||||    
T  42852011 gcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttat-aaaatacaattt 42852109  T
Q  213 tcgttagtgag 223  Q
    |||||||||||    
T  42852110 tcgttagtgag 42852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 9477292 - 9477362
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagttt 182  Q
    |||||||||||||||| |||||||||    |||||||   |||||||||||||| ||| ||||||||||||||||    
T  9477292 ttagagcttatgcaaagcaacttatg----taaatatgcttttatgtattatttataaacttgttaatgtagttt 9477362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 17657244 - 17657341
Alignment:
Q  126 aacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||||    |||||||||||||  ||||||||  | ||||||||||||||| | |  ||||||| |||  |||||||||||||||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgag 17657341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 24030203 - 24030280
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||| ||||||| ||||| ||||||||||    |||||||||||||  ||||||||| || ||||||||||||||    
T  24030203 agcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaa 24030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 41419531 - 41419600
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||||||||||||||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgag 41419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtt 217  Q
    |||||||||||||||    |||||||||||||  ||||||||| || |||||||| ||||| | || ||||||| ||| ||||||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 2531310 - 2531388
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||| ||||  |||||||||||||||||||||||  |  ||||||||||||| |||| || |||| ||||||||||||    
T  2531310 ttagagtttatataaaacaacttatgcaaataaataagttgttatgtattatttataag-tttttaaggtagtttatgaa 2531388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 2878775 - 2878665
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||| ||||| ||||||||||||||||    ||||| |||||||  |||| |||| ||||| ||||||||||  | |||||| ||| ||| |||    
T  2878775 gagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaat 2878677  T
Q  211 tttcgttagtga 222  Q
    ||| ||||||||    
T  2878676 ttttgttagtga 2878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 5203535 - 5203425
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||  || |||| ||||||||||| || ||  |||||||| |||     
T  5203535 ttagagcttatataaaacagcttatgcaaataaataagtatttatgtattatttataa-atttttaaggtagtttatgagaaaatcatttatgaagatac 5203437  T
Q  208 aattttcgttag 219  Q
    || ||| |||||    
T  5203436 aaattttgttag 5203425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 13625603 - 13625508
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatga-aaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||||||||||||   ||||| |||||||  |||||||||| | ||||||||||| ||| | || |||| || ||| |||||||||||||||    
T  13625603 cttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtga 13625508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 40697005 - 40697064
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    ||||||||||||||||  | |||||||||||||| ||||||||| || ||| ||||||||    
T  40697005 cttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaa 40697064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 341977 - 342055
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||| ||||| ||| |||||||||  | ||||||||||||||  ||| |||  || ||||||||||||||    
T  341977 gagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaa 342055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 1576620 - 1576729
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    |||||||||||||| |||| |||||||||||    |||||||||| ||  ||||||||| ||||||||||||| ||| | |  || |||| ||| |||||    
T  1576620 gcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1576718  T
Q  213 tcgttagtgag 223  Q
    | |||||||||    
T  1576719 ttgttagtgag 1576729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 1608195 - 1608086
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    |||||||||||||| |||| |||||||||||    |||||||||| ||  ||||||||| ||||||||||||| ||| | |  || |||| ||| |||||    
T  1608195 gcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaattt 1608097  T
Q  213 tcgttagtgag 223  Q
    | |||||||||    
T  1608096 ttgttagtgag 1608086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 2670062 - 2670144
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatata 193  Q
    ||||||||| ||||||  ||||||||||||| | |  |||||||| ||||  |||| |||| || ||||||||||||||||||    
T  2670062 gagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaatata 2670144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 41125691 - 41125721
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaa 141  Q
    |||||||||||||||||||||||||||||||    
T  41125691 gagcttatgcaaaacaacttatgcaaataaa 41125721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 6125289 - 6125385
Alignment:
Q  126 aacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||| |||||||||    |||||||||||||  ||| ||| | |||||| |||||||||| |||| ||||||||||| ||| || |||||||||    
T  6125289 aacttatgtaaataaataaacttttatgtattattcataatcttataaatgtattttatgaaaa-atagcttatgaatatacaatatttgttagtgag 6125385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 11163367 - 11163290
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||| |||||| |||| ||||  | ||||||||| |||  |||||||||  | ||||||||||||||    
T  11163367 agcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagtttatgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 6144777 - 6144833
Alignment:
Q  163 taagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    ||||||||| || ||| |||||||||| |||| ||||||||||| |||||| |||||    
T  6144777 taagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttag 6144833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 12467269 - 12467329
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||    |||||||||||||  ||||||||| || ||||||||||||||    
T  12467269 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 12467329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 29657985 - 29658017
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||||||||||||||||||||| |||||    
T  29657985 gagcttatgcaaaacaacttatgcaaaaaaata 29658017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 40452540 - 40452464
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataa-ttttcgttagtgag 223  Q
    |||||| ||||||  ||||||||| || |||||||||||| | | || ||||||| |||||| ||||||||||||||    
T  40452540 tttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgag 40452464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 49971235 - 49971350
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| | || ||| ||| |||     
T  49971235 ttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatac 49971334  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  49971335 aattttcgttagtgag 49971350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 15631888 - 15632003
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| ||||||||||||| ||||||||||  | |||||||||||||| |||| ||||||||||| |||||||||| |  ||||||||| |||     
T  15631888 ttagagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatac 15631987  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  15631988 aattttcgttagtgag 15632003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 41576476 - 41576383
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    ||||| ||||||||| || |||||||| ||||| ||||||||| ||||| ||||||| |||||||||||||||| |||||||||| ||||||||    
T  41576476 ttatgtaaataaataattttttatgtactatttataagcttgtaaatgttgtttatgtaaatatagtttatgaagatataatttttgttagtga 41576383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 5243505 - 5243396
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | ||| |||||||||| |||| || |||| |||||||||||||| |||||||||||| |||     
T  5243505 ttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttataagttt-ttaaggtagtttatgaaaaaatagtttatgaagatac 5243407  T
Q  208 aattttcgtta 218  Q
    |||||||||||    
T  5243406 aattttcgtta 5243396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 12256591 - 12256702
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||||||||||||| |||||| |||   ||||| |||||||| |||| ||||| |||||||||||||||| | | ||||||||  ||     
T  12256591 ttagagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaaggtac 12256689  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  12256690 aattttcgttagt 12256702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 17814175 - 17814286
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || | ||||||| |||     
T  17814175 ttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaaaatgggttatgaaaatac 17814273  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  17814274 aattttcgttagt 17814286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 32497370 - 32497259
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| | |||||||||  ||| |||    
T  32497370 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgaggatacaat 32497272  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  32497271 tttcgttagtgag 32497259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 17628526 - 17628412
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||| ||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| |  ||||||||| |||     
T  17628526 ttagagcttatataaaacagcttatacaaataaataagtttttatgtattatttataagttt-ttaaggtagtttatgaaaaaaccgtttatgaagatac 17628428  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  17628427 aattttcgttagtgag 17628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 5347139 - 5347248
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| ||||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || | ||||||| |||     
T  5347139 ttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaaaatgggttatgaaaatac 5347237  T
Q  208 aattttcgtta 218  Q
    |||||||||||    
T  5347238 aattttcgtta 5347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 5610490 - 5610586
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttcttt--atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||||| |||||||||| | |||||  |||||||||||| |||  ||||||||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  5610490 ttagagtttatgcaaaatagcttataaaaataaatatttttttttatgtattatttataagctttttaatgtagtttataaaaaaatagtttatgaa 5610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 26542970 - 26543071
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||||||||||||||||   |||||||||||| | |||| |||||||||||||||||||||| | |  ||| |||  || |||||||||||||    
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaagtacaattttcgttagt 26543069  T
Q  221 ga 222  Q
    ||    
T  26543070 ga 26543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 26435273 - 26435162
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||| ||||||| ||||||||||||||||  | |||||||||||||| |||| |||| || |||||||||||||| |  ||||||||| ||| | |    
T  26435273 gagcttatacaaaacagcttatgcaaataaataagt-tttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagatacatt 26435175  T
Q  211 tttcgttagtgag 223  Q
    |||||||| ||||    
T  26435174 tttcgttactgag 26435162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 15791368 - 15791482
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || ||| ||||| |||     
T  15791368 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaatcgttaatgaagatac 15791466  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||| ||||    
T  15791467 aattttcgttaatgag 15791482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 35276001 - 35275885
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaata--tttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatat 205  Q
    |||||||||||  |||||| ||||| ||||||||||  ||| |||||||||||||| |||| || |||| ||||||||||||||    ||||| ||||||    
T  35276001 ttagagcttatataaaacagcttatacaaataaataaatttttttatgtattatttataagatt-ttaaggtagtttatgaaaaacctgtttaggaatat 35275903  T
Q  206 ataattttcgttagtgag 223  Q
    | ||||||||||||||||    
T  35275902 acaattttcgttagtgag 35275885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 51162253 - 51162363
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||  | ||||||||||||||||    || |||||||||||  ||| ||||||| |||||||||||||| | |  |||||||||||     
T  51162253 ttagagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatac 51162352  T
Q  208 aattttcgtta 218  Q
    |||||||||||    
T  51162353 aattttcgtta 51162363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 20169251 - 20169352
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||| |||||| ||||||||||||||||    |||||||||||||| |||| || | ||| ||||||||||||| | ||||||| |||||| |||    
T  20169251 gagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaat 20169350  T
Q  211 tt 212  Q
    ||    
T  20169351 tt 20169352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 15515409 - 15515334
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||||||||||||||    
T  15515409 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgag 15515334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 35590118 - 35590229
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||| |||||||||||||||||||||||    |||||||||  ||  ||||||||| || || ||||||||||| | || ||||||| ||| ||||    
T  35590118 agcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaatt 35590217  T
Q  212 ttcgttagtgag 223  Q
    ||||| ||||||    
T  35590218 ttcgtcagtgag 35590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 41196772 - 41196697
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||||||||| ||||||||||||||||| | || ||||||| ||| |||||| |||||||||    
T  41196772 tttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgag 41196697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 42363586 - 42363678
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    ||||||||||||||| ||| ||||| ||||||||| |  ||||||||||||||| |||||||||||||  |||| ||||||| | |||| |||||    
T  42363586 ttagagcttatgcaagacagcttatacaaataaatgt--ctttatgtattatttataagcttgttaataaagttaatgaaaaaacagttgatgaa 42363678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 9178094 - 9178026
Alignment:
Q  121 aaaacaacttatgcaaataaata--tttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||||||||||  ||| ||||||| | |||  |||||||||||||||||||||||||    
T  9178094 aaaacaacttatgcaaataaataattttttttatgtttaattcataagcttgttaatgtagtttatgaa 9178026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 9572884 - 9572771
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatt-tctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataa 209  Q
    |||||||||||||||| ||| ||||||||||||   | ||||| |||||||  |||| ||||||| |||||||||||||| | | |||||||| ||| |     
T  9572884 gagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaag 9572785  T
Q  210 ttttcgttagtgag 223  Q
    |||| |||||||||    
T  9572784 tttttgttagtgag 9572771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 26946204 - 26946092
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatt-tctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataa 209  Q
    |||||||||||||||  |||||| |||||||||   | ||||||| |||||  |||||||||||| |||||||||||||| | |  ||||||| ||| ||    
T  26946204 gagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaa 26946105  T
Q  210 ttttcgttagtga 222  Q
    ||||| |||||||    
T  26946104 ttttccttagtga 26946092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 35897718 - 35897646
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||||||||||||||||  | ||||| |||||||  ||||||| | || ||||||||||||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 42591412 - 42591480
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||| |||| ||||||| ||| |||||||||| |||||||||||| ||| | |||||||||||||    
T  42591412 tattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacacttttcgttagtga 42591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 46501100 - 46500988
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||  ||||||| ||||| ||||||||     ||| |||||||||| ||||||||| | ||||||||||||||| |||| ||||||| ||| |||    
T  46501100 gagcttatataaaacaatttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaat 46501001  T
Q  211 ttt-cgttagtga 222  Q
    ||| |||||||||    
T  46501000 tttccgttagtga 46500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 4068103 - 4068214
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    ||||| ||||||| | ||| ||||||||||||    |||||||||||||  ||||||||| || |||||||||||||| | |  ||||||| |||  |||    
T  4068103 agcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactatt 4068202  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  4068203 ttcgttagtgag 4068214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 29333401 - 29333510
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||| |||||||||| || | ||| ||||||||||  | || ||||||||||| |||| |||||||  ||| ||||||||| | |  |||||||||||     
T  29333401 ttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatac 29333500  T
Q  208 aattttcgtt 217  Q
    ||||||||||    
T  29333501 aattttcgtt 29333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 37148191 - 37148114
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||| || ||||||||||||||||    || ||||||||||| ||||  |||||| ||||||||||||||    
T  37148191 agcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaa 37148114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 37157016 - 37156939
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||| || ||||||||||||||||    || ||||||||||| ||||  |||||| ||||||||||||||    
T  37157016 agcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaa 37156939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 41003376 - 41003453
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt-taatgtagtttatgaaaa 189  Q
    |||| ||||||| ||||||||||||||||||  | |||||||||||||| |||| ||||  || ||||||||||||||    
T  41003376 gcttgtgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaaa 41003453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 47413395 - 47413460
Alignment:
Q  147 ctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    |||| |||||||||| ||||||||| ||||||||||||||||  | || ||||||| |||||||||    
T  47413395 ctttttgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagatataattt 47413460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 3116159 - 3116052
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||  |||||| ||||||||||||||||  | ||||||| || ||| |||| || |||| |||||||||||||| |   |||||||| ||| ||||    
T  3116159 agcttatataaaacagcttatgcaaataaataaatttttatgttttgtttataagttt-ttaaggtagtttatgaaaaaaccatttatgaagatacaatt 3116061  T
Q  212 ttcgttagt 220  Q
    |||||||||    
T  3116060 ttcgttagt 3116052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 13038938 - 13039046
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    |||||||||||  || |||||||||||||    ||||| |||||||  | |||||||||| |||||||||||||| | |  ||||||| ||| | |||||    
T  13038938 ttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaagttttc 13039037  T
Q  215 gttagtgag 223  Q
    |||||||||    
T  13039038 gttagtgag 13039046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 35282686 - 35282582
Alignment:
Q  118 tgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtt 217  Q
    ||||||||| ||||||||||||||||    ||||| |||||||| ||| | |||||| |||||||||||||| | |  ||||||| ||| ||||||  ||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt 35282587  T
Q  218 agtga 222  Q
    |||||    
T  35282586 agtga 35282582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 36259387 - 36259283
Alignment:
Q  114 cttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    ||||||||  |||| ||||| |||||||||  | |||||||||||||  |||  |||| | ||||||||||||||| | ||||||| || ||| ||||||    
T  36259387 cttatgcagtacaatttatgtaaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaatttt 36259288  T
Q  214 cgtta 218  Q
    |||||    
T  36259287 cgtta 36259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 6337818 - 6337747
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||||| |||||    
T  6337818 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttag 6337747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 10082248 - 10082315
Alignment:
Q  122 aaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||||||||||  | ||||||| |||||  |||| |||| || ||||||||||||||    
T  10082248 aaacaacttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaa 10082315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 16889027 - 16888953
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||||| ||||||||    
T  16889027 tttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgag 16888953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 22593489 - 22593394
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||  | |||||||||||||  ||||||||| |||| |||||| |||||   | ||||| || ||| |||||| |||||||||    
T  22593489 cttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgag 22593394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 37329474 - 37329399
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||| ||||| || |||||||||||||| | || ||||||| ||| |||||||||| |||||    
T  37329474 tttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgag 37329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 18327515 - 18327617
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    |||| ||||||| ||||||||||||||||    ||||||||||| |  ||||||||| ||  ||||||||||||| | || ||||||| | | |||||||    
T  18327515 ttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaacagcttatgaacacacaattttc 18327614  T
Q  215 gtt 217  Q
    |||    
T  18327615 gtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 10365159 - 10365236
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||| |||| || |||||||||| ||||    |||||||||||||  ||||||||| || ||||||||||||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaa 10365236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 13412554 - 13412474
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||| ||||  |||| |||||||||||||| |||  | |||||||||||||| |||| || |||| ||||||||||||||    
T  13412554 ttagagattatataaaataacttatgcaaatacataaatttttatgtattatttataag-tttttaaggtagtttatgaaaa 13412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 16225493 - 16225573
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||||||  ||||| |||||||||  | ||||||||||| || |||| ||||||| ||| |||| |||||    
T  16225493 ttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataag-ttgttaaggtaatttaggaaaa 16225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 28122607 - 28122712
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||||||| || |||||||||||||||     ||||| |||||||  | ||||| |||| |||||||||||||| |||  |||| || ||| |||||||    
T  28122607 ttatgcaaatcagcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttc 28122706  T
Q  215 gttagt 220  Q
    ||||||    
T  28122707 gttagt 28122712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 51409789 - 51409720
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagttt 197  Q
    ||||||||||||||||  | | |||||||||||  |||| |||| ||||||||||||||| ||| |||||    
T  51409789 cttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaagatacagttt 51409720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 3069913 - 3069841
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||||||  |||||||    
T  3069913 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgag 3069841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 22103115 - 22103205
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||| |||||||||  | |||||||||||||| |||| || |||| |||||||||||||| ||   ||||||| ||| |||||||||||||    
T  22103115 cttatgtaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaa-atgagttatgaaaatacaattttcgttagt 22103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 22593337 - 22593369
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    |||||||||||||||| ||||||||||||||||    
T  22593337 gagcttatgcaaaacagcttatgcaaataaata 22593369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 25485738 - 25485846
Alignment:
Q  114 cttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    ||||| ||||| | ||||||||||||||||  | ||||| | |||||  | | ||| |||| |||||||||||||| | | |||||||| ||| ||||||    
T  25485738 cttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaaatttt 25485837  T
Q  214 cgttagtga 222  Q
    || ||||||    
T  25485838 cgctagtga 25485846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 26988172 - 26988244
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||| |||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||| ||||||||    
T  26988172 tttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagt 26988244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 46689649 - 46689537
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||  ||||||||||||| |    ||||| |||||||  | |||||||||| ||| ||||| | || | |  ||||||| ||| |||    
T  46689649 gagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaaat 46689550  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  46689549 tttcgttagtgag 46689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 48819326 - 48819398
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| | |||| |||||||||    
T  48819326 atgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgag 48819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 50919517 - 50919581
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||| |||| |||| |||||||||||| |||| | || ||||||| ||| |||||||||||    
T  50919517 tattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttcgtta 50919581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 10448758 - 10448864
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||  |||    
T  10448758 ttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtat 10448857  T
Q  208 aattttc 214  Q
    |||||||    
T  10448858 aattttc 10448864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 28741316 - 28741201
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||| | |||||||||| |||||||||||||||||| |||||||||||| || |||||||||||| |||||||||||||| | || |||||||  ||     
T  28741316 ttagagttcatgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtac 28741217  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  28741216 aattttcgttagtgag 28741201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 29614178 - 29614292
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||||||||| |||     
T  29614178 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagtttatgaagatac 29614276  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  29614277 aattttcgttagtgag 29614292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 53218138 - 53218027
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    ||||||||||||||||||||||| ||||||||    |||||||||||||  ||||||||| || |||||||||||||| | |  || |||| ||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatt 53218039  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  53218038 ttcgttagtgag 53218027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 4257403 - 4257287
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg--aaaatatagtttatgaatat 205  Q
    |||||||||||  |||||||||||||||||||||||  | |||||||||||||| |||| || |||| ||||||||||  |||| | |||||||||| ||    
T  4257403 ttagagcttatataaaacaacttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaaacagtttatgaagat 4257305  T
Q  206 ataattttcgttagtgag 223  Q
    | |||||||| |||||||    
T  4257304 acaattttcgctagtgag 4257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 40581176 - 40581098
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||  ||||||||| || ||||||||||||||    
T  40581176 gagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaa 40581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 2086793 - 2086690
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||| ||||| |||||| |||||||||    |||||||||||||| ||| ||||| || || ||||||||||| |||||||||||| |||     
T  2086793 ttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaagatac 2086694  T
Q  208 aatt 211  Q
    ||||    
T  2086693 aatt 2086690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 3645287 - 3645401
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||| ||||| |||     
T  3645287 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatgaagatac 3645385  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  3645386 aattttcgttagtgag 3645401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 20894487 - 20894601
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||  || |||||||||||| |||||| | |||| ||||| |||     
T  20894487 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaatgtagtttttgaaaaaacagttcatgaagatac 20894585  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  20894586 aattttcgttagtgag 20894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 34707812 - 34707704
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||||||| | ||||| |||    |||||||||||||  |||||||||||| |||||||||||||| | || | | ||| ||| |||    
T  34707812 gagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaat 34707713  T
Q  211 tttcgttag 219  Q
    |||||||||    
T  34707712 tttcgttag 34707704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 52021250 - 52021346
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg-aaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||||   |||||||||||||  |||| |||| || |||||||||| |||| | || ||||||| ||||||||||||||||||||    
T  52021250 cttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgag 52021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 37243493 - 37243544
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  37243493 atgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaa 37243544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 38524093 - 38524184
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||||  | || ||||||||||| |||  ||||||| |||||||||||||| ||  |||||||||||  |||||||||||||    
T  38524093 ttatgcaaataaataagtattaatgtattatttataaatttgttaaggtagtttatgaaaaaatcatttatgaatatgcaattttcgttagt 38524184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 22809289 - 22809185
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatt-tctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    |||||||||||| ||||||||||||||||   | ||||| |||||||  ||||||||| || |||||||||||||| |  | ||||||| ||| ||||||    
T  22809289 ttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaatttt 22809190  T
Q  214 cgtta 218  Q
    |||||    
T  22809189 cgtta 22809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 53787827 - 53787739
Alignment:
Q  135 aaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||| | ||||||||||| || ||||||| ||||| ||||||| ||||| | ||||||| || |||||||||| |||| ||||    
T  53787827 aaataaatatatttttatgtattacttataagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgag 53787739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 11528881 - 11528980
Alignment:
Q  114 cttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    |||||||||||||||||||| || ||||||    |||||||||||||  |||  ||||||||||||||||||| || | |  ||||||| ||||||||||    
T  11528881 cttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagatataatttt 11528980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 29830872 - 29830793
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    ||||||||||| |||||||  |||||||||||||||  | |||||||||||| | || | ||||||| ||||||||||||    
T  29830872 ttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 43376701 - 43376757
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatga 186  Q
    ||||||||||||||| |  ||| ||||||||||| ||||||||||||||||||||||||    
T  43376701 cttatgcaaataaatgt--cttaatgtattatttataagcttgttaatgtagtttatga 43376757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 52421203 - 52421132
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    |||||||||||||  ||||||||| || |||||||||||||| |||||| ||||| ||| |||||| |||||    
T  52421203 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttag 52421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 10667395 - 10667496
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||| |||||| |||||||||||    | |||||||||||  ||||||||| ||||||||||||||||  | | |||||||| |||||| ||| ||||||    
T  10667395 aaaataacttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagt 10667494  T
Q  221 ga 222  Q
    ||    
T  10667495 ga 10667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 10521180 - 10521252
Alignment:
Q  150 tatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||||||  ||||||||| ||||||||||||||||  | | |||||||| |||||| ||| ||||||||    
T  10521180 tatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtga 10521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 28623335 - 28623283
Alignment:
Q  109 tagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattattt 161  Q
    ||||||||||  |||||||||||||||||||||||  | ||||||||||||||    
T  28623335 tagagcttatagaaaacaacttatgcaaataaataagtttttatgtattattt 28623283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 29270348 - 29270460
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||||||||   ||||||||    |||||||||||||  ||||||| | ||  || |||||||||| | || ||||||| ||| |||    
T  29270348 gagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaat 29270447  T
Q  211 tttcgttagtgag 223  Q
    |||||||| ||||    
T  29270448 tttcgttaatgag 29270460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 43080016 - 43079928
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgt 216  Q
    ||||||||||||||||    ||||||| |||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||||||||    
T  43080016 cttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 43079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 24841489 - 24841423
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaa 174  Q
    |||||||||||||||| ||||||| |||||||||||  | | ||| |||||||| |||| |||||||    
T  24841489 ttagagcttatgcaaagcaacttaagcaaataaataagtttgtatatattatttataagtttgttaa 24841423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 30499950 - 30500008
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaag 166  Q
    ||||||||||| |||||||  |||||||||||||||  | |||||||||||||| ||||    
T  30499950 ttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataag 30500008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 10272110 - 10272167
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagctt 169  Q
    |||||||||||||||||| |||||||||||||    |||||||||||||  |||||||    
T  10272110 agcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagctt 10272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 20174999 - 20174930
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||| ||| |||| |||  ||||||||||||| | |  ||||||||||| |||||||||||||    
T  20174999 atgtattatttataaacttgctaagttagtttatgaaaaaacaacttatgaatatacaattttcgttagt 20174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 24842196 - 24842127
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt-taatgtagtttatgaaaa 189  Q
    |||||||||||||||||||||||  | |||||||||||||  |||| ||||  |||||| ||||||||||    
T  24842196 aaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatgaaaa 24842127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 36266228 - 36266309
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||  ||||||  |||||||||||||||    |||||||||||||| |||| ||||||| ||| |||| |||||    
T  36266228 ttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 585008 - 585116
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||| ||||||  |||||||||||||||    |||||| ||||||   |||||| || | |||||||||||||| | |  ||||||| ||| ||||    
T  585008 agcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaatt 585107  T
Q  212 ttcgttagt 220  Q
    |||||||||    
T  585108 ttcgttagt 585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 5129896 - 5129836
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||  | || ||||||||||  ||||||||| |||||| ||||||||||    
T  5129896 ttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaa 5129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 37778134 - 37778232
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||||||||| | |||   ||||||||||||  ||  || |||| |||||||||||||| || | ||||||| ||| |||||| ||||||    
T  37778134 aaaacaacttatgcaaataagttttt---tatgtattatttagaaattt-ttaaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagt 37778229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 42956258 - 42956166
Alignment:
Q  131 atgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  | |||||||||||||  ||| |||||  | ||||||||||| || | || |||| || ||| ||||||||||||||||    
T  42956258 atgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgag 42956166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 22032746 - 22032861
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||| | | ||||||||  ||     
T  22032746 ttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtac 22032845  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  22032846 aattttcgttagtgag 22032861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 47654516 - 47654401
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||| ||||||||| |||||| ||||||||||  | | ||||||||| | ||||||||||||||||||||||||||| | ||||||||||  ||     
T  47654516 ttagagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtac 47654417  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  47654416 aattttcgttagtgag 47654401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 22575570 - 22575682
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||| |||||| ||||||||||||||||  | |||||||||||||| |||| |||||||  || |||||||||| | |||||||||| |||     
T  22575570 ttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatac 22575669  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  22575670 aattttcgttagt 22575682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 14676061 - 14675951
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||||||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| | |||||||||| |||     
T  14676061 ttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataag-tttttaaggtagtttatgaaaaaacagtttatgaagatac 14675963  T
Q  208 aattttcgttag 219  Q
    ||||||| ||||    
T  14675962 aattttcattag 14675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 16958803 - 16958911
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||  |||||||||||||||| ||||||  | |||||||||||||| |||| || |||| |||||||||||||| |  ||||||||| ||| |||    
T  16958803 gagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccgtttatgaagatacaat 16958901  T
Q  211 tttcgttagt 220  Q
    ||||||||||    
T  16958902 tttcgttagt 16958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 19913929 - 19914041
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| |||||||| |||||||||  | |||||||  ||||| |||  |||||||||||||||||||||| |  ||||||||| | ||    
T  19913929 ttagagcttatataaaataacttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaaacggtttatgaagagat 19914028  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  19914029 aattttcgttagt 19914041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 14691361 - 14691286
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||||||||| |||||| |||||||||| | | |||||||| ||||||||||||||||||||    
T  14691361 tttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgag 14691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 35809074 - 35809181
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| |||| || ||||||||||||||||    || ||||||||||| |||||||||||| |||||||||||||| | |  ||| |||||||     
T  35809074 ttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatac 35809173  T
Q  208 aattttcg 215  Q
    ||||||||    
T  35809174 aattttcg 35809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 44613572 - 44613494
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| ||||||||||||||||    ||||| |||||||  |||||||||||| ||||||||||||||    
T  44613572 gagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaa 44613494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 29390645 - 29390542
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||| ||||||||||||||||||||||| |  || ||||||||||  ||||||||| || |||||||||||||| | |  ||||||| ||| |||||||    
T  29390645 ttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaaa-acaacttatgaagatacaattttc 29390547  T
Q  215 gttag 219  Q
    |||||    
T  29390546 gttag 29390542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 23137264 - 23137150
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| ||||||| |||| |||||  | |||||||||||||| |||| || |||| |||||||||| ||| || ||||||||| |||     
T  23137264 ttagagcttatataaaataacttatacaaacaaataaatttttatgtattatttataag-tttttaaggtagtttatgtaaaaatcgtttatgaagatac 23137166  T
Q  208 aattttcgttagtgag 223  Q
    ||||||| ||||||||    
T  23137165 aattttcattagtgag 23137150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 43818959 - 43818887
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    ||||||||||||||| |  ||||||||||||||| |||||||||||||||  |||||||||| | ||||||||||    
T  43818959 cttatgcaaataaatgt--ctttatgtattatttataagcttgttaatgttatttatgaaaaaacagtttatgaa 43818887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 41677361 - 41677439
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||  ||||||||||||||||||||||||  | |||||||||||||  |||| |||| |||||||||||| ||||    
T  41677361 gagcttaaacaaaacaacttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaa 41677439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 16933028 - 16932920
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||  |||| ||||||||||| ||||||  | |||||||||||||| |||| || |||| |||||||||||||| |   |||||||| ||| |||    
T  16933028 gagcttatataaaataacttatgcaactaaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccatttatgaagatacaat 16932930  T
Q  211 tttcgttagt 220  Q
    ||||||||||    
T  16932929 tttcgttagt 16932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 16938411 - 16938303
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||  |||| ||||||||||| ||||||  | |||||||||||||| |||| || |||| |||||||||||||| |   |||||||| ||| |||    
T  16938411 gagcttatataaaataacttatgcaactaaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccatttatgaagatacaat 16938313  T
Q  211 tttcgttagt 220  Q
    ||||||||||    
T  16938312 tttcgttagt 16938303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 29378649 - 29378741
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||||||||    |||||||||||||| | || |||| || |||||||||||||| | || ||||||| ||| |||||||||||||    
T  29378649 cttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 29378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 35246656 - 35246768
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||| |||  |||||||||||||||||||||||  | ||||||||||||||  ||| || |||| |||||||||||||  | | |||||||  |||     
T  35246656 ttagagcctatataaaacaacttatgcaaataaataagtttttatgtattatttaaaag-tttttaaggtagtttatgaaa--aaactttatgaggatac 35246752  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  35246753 aattttcgttagtgag 35246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 40629515 - 40629440
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||| ||||| ||||||||||   ||||||||||||||  ||||||||| || ||||||||||||    
T  40629515 gagcttatgcaaaacagcttatccaaataaataaa-ctttatgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 991484 - 991598
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||||| |||||||  | |||||| ||||||| |||| || |||| |||||||||||||| |   |||||||| |||     
T  991484 ttagagcttataaaaaacaccttatgcacataaataagtttttatgcattatttataag-tttttaaggtagtttatgaaaaaaccatttatgaagatac 991582  T
Q  208 aattttcgttagtgag 223  Q
    | ||||||||||||||    
T  991583 acttttcgttagtgag 991598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 23120019 - 23119908
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||||| |||||||||||||| |  || | ||||||||  |||| |||| ||||||||||| ||||  | ||||| |||| ||| |||    
T  23120019 gagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaat 23119920  T
Q  211 tttcgttagtga 222  Q
    ||| ||| ||||    
T  23119919 ttttgttcgtga 23119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 23356589 - 23356478
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    ||||||| |||||||||||||| |||||||||   |||| |||||||||   ||| |||| || ||| |||||||||| | |||||||||| |||  |||    
T  23356589 agcttatacaaaacaacttatgaaaataaataaggctttttgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatt 23356490  T
Q  212 ttcgttagtgag 223  Q
    || |||||||||    
T  23356489 tttgttagtgag 23356478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 48021746 - 48021636
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||| |||||||| |||||||||||||||     |||| |||||||  |||||||||||| |||||||||||||| |||  | ||||| ||| |||    
T  48021746 gagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaaa-ataactaatgaagatacaat 48021648  T
Q  211 tttcgttagtga 222  Q
    |||| |||||||    
T  48021647 tttcattagtga 48021636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 48949708 - 48949818
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgta-ttatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||  ||||||  ||||||||||||||   | |||||||| |||||| |||| || |||| |||||||||||||| | |||||||||| |||||||    
T  48949708 agcttatataaaacaggttatgcaaataaatgagtttttatgtaattatttataagttt-ttaaggtagtttatgaaaaaacagtttatgaagatataat 48949806  T
Q  211 tttcgttagtga 222  Q
     |||||||||||    
T  48949807 attcgttagtga 48949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 43391717 - 43391819
Alignment:
Q  120 caaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    |||||||||||||| |||||||||    | | | |||||||  |||| ||||||| |||||||||||||| ||| |||||||| |||||||||| ||| |    
T  43391717 caaaacaacttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttg 43391816  T
Q  220 tga 222  Q
    |||    
T  43391817 tga 43391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 44799409 - 44799501
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||  | ||||| |||||||| |||| || |||| ||||||| |||||| |||||||||||| ||| ||| ||||||||||||    
T  44799409 ttatgcaaataaataagtttttat-tattatttataagttt-ttaaggtagtttttgaaaaaatagtttatgaagatagaatattcgttagtgag 44799501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12473193 - 12473242
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatt 160  Q
    ||||||||||||||||||||||||||| |||||  | |||||||||||||    
T  12473193 gagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattatt 12473242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 28004568 - 28004648
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||  || |||| ||||||||||||||    
T  28004568 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttttaa-gtagtttatgaaaa 28004648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 30094813 - 30094752
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||| ||||||||| | |||| || |||||||| |||| ||||||||||||||||||||||    
T  30094813 cttatacaaataaatgtgtcttaatatattatttataagattgttaatgtagtttatgaaaa 30094752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 1312098 - 1312212
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||| || |||||||  | ||||| |||||||| |||| || |||| | |||||||||||| |  |||||||||||||     
T  1312098 ttagagcttataaaaaacagcttatacagataaataagtttttatatattatttataagttt-ttaaggcagtttatgaaaaaaccgtttatgaatatac 1312196  T
Q  208 aattttcgttagtgag 223  Q
    | ||||| ||||||||    
T  1312197 acttttcattagtgag 1312212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 2194133 - 2194032
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgta-ttatttgtaagcttgttaatgtagtttatgaaaata--tagtttatgaatatataattttcgtt 217  Q
    |||| ||||||||||||||| ||  | |||||||| |||||| |||| || |||| |||||||||||||| |  || |||||||| ||||||||||||||    
T  2194133 aaaataacttatgcaaataattaagtttttatgtacttatttataagttt-ttaaggtagtttatgaaaaaaaataatttatgaagatataattttcgtt 2194035  T
Q  218 agt 220  Q
    |||    
T  2194034 agt 2194032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 24371508 - 24371430
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||  |||||| ||||||||||||||||  | || ||||||||||| |||| || |||| ||||||||||||    
T  24371508 ttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttataag-tttttaaggtagtttatgaa 24371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 30181537 - 30181628
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||||||||||| |||||||| ||||||||| |    |||||||||||||  ||||||||| || ||||||||| |||| | || |||||||    
T  30181537 gagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaa 30181628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 9024769 - 9024858
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg-aaaatatagtttatgaatatataattttcgtt 217  Q
    |||||| ||| |||||||| |||||||||||||| || |  ||||||||||||||||| |||| | ||||||||||  || ||||||||||    
T  9024769 cttatgtaaacaaatattt-tttatgtattatttatacgtgtgttaatgtagtttatgaaaaaaacagtttatgaaggtacaattttcgtt 9024858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 18855317 - 18855267
Alignment:
Q  163 taagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    ||||||||| ||||||||||||| ||| |||| ||||||| ||||||||||    
T  18855317 taagcttgtcaatgtagtttatggaaaaatagattatgaagatataatttt 18855267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 34922926 - 34922996
Alignment:
Q  119 gcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||||||||||||    |||||||||||||  |||| |||| || ||||||||| ||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaa 34922996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 38372545 - 38372623
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| ||||||||||||||||     ||||||||||||  |||| |||| || |||||||| |||||    
T  38372545 gagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaa 38372623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 47511047 - 47511133
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    ||||||||||||||||    |||||||||||||  |||||||||||| | ||| |||||||| | || ||||||| ||| |||||||    
T  47511047 cttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttc 47511133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 19496345 - 19496422
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatat-ttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||| ||||||||||||| ||||||||||| || ||||||| |||||  |||| || | |||||| ||||||||    
T  19496345 gagcttatacaaaacaacttatacaaataaatatattttttatgtgttattcataagtttttcaatgtaatttatgaa 19496422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 21249147 - 21249192
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatt 160  Q
    ||||||||||| |||||||||||||||||  | |||||||||||||    
T  21249147 ttatgcaaaactacttatgcaaataaataagtttttatgtattatt 21249192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 31613759 - 31613686
Alignment:
Q  116 tatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||| ||||| | ||||||||||  | | |||||||||||  | ||||||| |||||||||||||||||    
T  31613759 tatgcaaaataacttgtacaaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaa 31613686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 47862746 - 47862815
Alignment:
Q  149 ttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    ||||||||||||| |||| || |||| ||  |||||||||| ||| ||||| |||||| |||||||||||    
T  47862746 ttatgtattatttttaagttttttaaggtgatttatgaaaaaataatttataaatatacaattttcgtta 47862815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 14536880 - 14536971
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    ||||||||||||  ||||||||| || |||||||||||||  |||| |||| ||  ||||||||||||| | | |||||||| ||||| ||||    
T  14536880 aaaacaacttatagaaataaataatt-tttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagatatattttt 14536971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 18251566 - 18251515
Alignment:
Q  167 cttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    |||||||| |||||||||||||| | | |||||||||||| ||||||||||||    
T  18251566 cttgttaaagtagtttatgaaaa-acaatttatgaatatacaattttcgttag 18251515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 21027602 - 21027510
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    |||||| |||||| ||| |||||  | |||||||||||||| |||| || |||| || ||||||||||| | ||||| |||| ||| ||||||    
T  21027602 aaaacagcttatgtaaacaaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaatttt 21027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 52700645 - 52700534
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||| ||||||||| |||||||||  |||||||||||||||| ||||||||| || || ||||||||||| |||||||||||| |||     
T  52700645 ttagagcttatgcaaa-caacttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatac 52700547  T
Q  208 aattttcgttagt 220  Q
     ||||||||||||    
T  52700546 gattttcgttagt 52700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 42617331 - 42617218
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| ||||||| ||||||||||||||||  | |||| ||||||||| |||| || |||| |||||||||||||| |||||||||||| ||||    
T  42617331 ttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttt-ttaaggtagtttatgaaaaaatagtttatgaagatat 42617233  T
Q  208 aattttcgttagtga 222  Q
     ||||||||||||||    
T  42617232 gattttcgttagtga 42617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 19725277 - 19725392
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||| ||||||| ||||||||| ||||||  | |||||||||||||| |||| ||||||| ||| |||||||||| | ||| |||||| ||||    
T  19725277 ttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaagatat 19725376  T
Q  208 aattttcgttagtgag 223  Q
    ||||||| ||||||||    
T  19725377 aattttcattagtgag 19725392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 26206435 - 26206344
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||| |||||||||||||| | ||||||||||| ||  ||||||||||||    
T  26206435 ttatgcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagt 26206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 4603429 - 4603319
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||  |||||||||||||||||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||||||||| ||| ||||    
T  4603429 agcttatataaaacaacttatgcaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagtttatgaagatacaatt 4603331  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  4603330 ttcgttagtgag 4603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 22117338 - 22117449
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||||||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| || | ||||||| ||      
T  22117338 ttagagcttatataaaacaacttatgcaaataaatacatttttatgtattatttataag-tttttaaggtagtttatgaaaaaatgggttatgaaaatgc 22117436  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  22117437 aattttcgttagt 22117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 29877626 - 29877738
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||| |||||||||||||||    |||||||||||||  |||||||| ||| ||||||||||||||   || ||||||| ||| |||    
T  29877626 gagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaat 29877725  T
Q  211 tttcgttagtgag 223  Q
    ||| |||||||||    
T  29877726 ttttgttagtgag 29877738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 46176080 - 46175969
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||  || |||| |||||||||||||| |||||||||||| |||     
T  46176080 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattt-ttaaggtagtttatgaaaaaatagtttatgaagatac 46175982  T
Q  208 aattttcgttagt 220  Q
    |||||||| ||||    
T  46175981 aattttcgctagt 46175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 15184531 - 15184645
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||||||||| |||     
T  15184531 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaagtagtttatgaaaaaacagtttatgaagatac 15184629  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  15184630 aattttcgttagtgag 15184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 213046 - 212969
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||  |||||||||||| ||||||||||||||    
T  213046 gagcttatgcaaaacaacttatgcaaataaataagt-tttatttattattcataagcttgttaaggtagtttatgaaaa 212969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 10795011 - 10794907
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||||| ||| || |||||||||  | ||||||||||||||  ||||| ||||| || ||||||||||| |||||||||||| |||     
T  10795011 ttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatttaaaagctcgttaaggtggtttatgaaaa-atagtttatgaagatac 10794913  T
Q  208 aatttt 213  Q
    ||||||    
T  10794912 aatttt 10794907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 10796370 - 10796474
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||||||||| || |||||||||  | ||||||||||||||  ||||| |||||  | ||||||||||| |||||||||||| |||     
T  10796370 ttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattatttaaaagctcgttaagatggtttatgaaaa-atagtttatgaagatac 10796468  T
Q  208 aatttt 213  Q
    ||||||    
T  10796469 aatttt 10796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 15179815 - 15179913
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||| ||||||||||||||||| | |||||||||||||| |||| || |||| |||||||||||| | || | ||||||| ||| |||||||||||||    
T  15179815 aaaacagcttatgcaaataaatatatttttatgtattatttataag-tttttaaggtagtttatgaagaaatggattatgaaaatacaattttcgttagt 15179913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 43415388 - 43415277
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||| | |||||||||| ||||||||||||  | |||||||||||||  |||| |||||||||||||||| ||||| | | ||||| || |||||||    
T  43415388 gagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatataat 43415289  T
Q  211 tttcgttagtga 222  Q
     || ||||||||    
T  43415288 atttgttagtga 43415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 2702817 - 2702705
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||| || |||||||| |||||||  | ||  |||||||||| |||| ||||||| |||||| ||||||| | |  |||||||||||     
T  2702817 ttagagcttatgcaaagcagcttatgcacataaataagtattagtgtattatttataagtttgttaaggtagttaatgaaaagacaacttatgaatatac 2702718  T
Q  208 aattttcgttagt 220  Q
    ||||||| |||||    
T  2702717 aattttcattagt 2702705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 46704368 - 46704257
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||| ||||||||||||||||||||  |  | ||||| |||||||  | |||||||||| |||||||||||||| | || ||||||| ||| |||    
T  46704368 gagcttatgtaaaacaacttatgcaaataataagct-tttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaat 46704270  T
Q  211 tttcgttagtgag 223  Q
    |||| ||||||||    
T  46704269 tttcattagtgag 46704257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 43699582 - 43699504
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||| |||||||||||| ||||||||||    ||||||| |||||  ||||||||| |||||||||||||||||    
T  43699582 gagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaa 43699504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 35124374 - 35124483
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| |||||||||||| |||    |||||||| ||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||     
T  35124374 gagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 35124473  T
Q  211 tttcgttagt 220  Q
    ||| ||||||    
T  35124474 ttttgttagt 35124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 17222853 - 17222925
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||||||||||||    
T  17222853 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagt 17222925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 22397387 - 22397295
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| ||||||||||  | || ||||||||||| ||||  |||||| |||||||||||||| | |  ||||||||||| |||||||||||||    
T  22397387 cttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgttagt 22397295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 18424376 - 18424270
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||||||||| |||| ||||||||||    |||||||||||||  ||| ||||| || |||||||||||||| | | |||||||| ||| |||    
T  18424376 gagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaa-acaatttatgaagatacaat 18424278  T
Q  211 tttcgtta 218  Q
    ||| ||||    
T  18424277 ttttgtta 18424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 27368248 - 27368145
Alignment:
Q  114 cttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    |||||| |||||||||||||||||||||||    ||||| |||||||  |||| |||| ||||||| ||||||||| | ||||||| || ||| |||| |    
T  27368248 cttatgtaaaacaacttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaattat 27368149  T
Q  214 cgtt 217  Q
    ||||    
T  27368148 cgtt 27368145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 28074369 - 28074459
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    ||||||||||||||||    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||||||||||    
T  28074369 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa-aaagcttatgaagatacaattttcgttag 28074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 36740908 - 36741003
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||    ||||| ||||||   ||||||||| || |||||||||||||||| |||| ||||| ||| ||||||| ||||||||    
T  36740908 cttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgag 36741003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 47202814 - 47202924
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||  |||||| ||||||||||||||||  | ||||||||||| || |||  || |||| |||||||||||||| |   |||||||| ||| ||||    
T  47202814 agcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaattt-ttaaggtagtttatgaaaaaaccatttatgaagatacaatt 47202912  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  47202913 ttcgttagtgag 47202924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 48591506 - 48591411
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||  | ||||| |||||||  || |||||| || |||||||||||||| | || ||||||| ||| ||||||||||| ||||    
T  48591506 cttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgag 48591411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 896974 - 897068
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    ||||||||||||||||    |||||||||||||  ||||||||| ||||||||||||||||| | | |||| | | |||  ||||||||||||||    
T  896974 cttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtga 897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 39932838 - 39932752
Alignment:
Q  126 aacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    ||||||||||||||||||    |||||||||||||| |||| ||||||| ||||| |||||||| | | |||||||| ||| |||||    
T  39932838 aacttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaattt 39932752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 41228890 - 41228968
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| ||||||||  ||||||    ||||| |||||||  |||||||||||| ||||||||||||||    
T  41228890 gagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaa 41228968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 23297425 - 23297502
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaa 188  Q
    |||||||||||||| | ||||||||||||||||    |||||||||||||  |||| |||| || |||||||||||||    
T  23297425 gagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaaa 23297502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 35010222 - 35010307
Alignment:
Q  135 aaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||  | |||||||||||||| |||| |||| || ||||||||||| || ||||||||| || ||| || ||||||||||    
T  35010222 aaataaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgttagt 35010307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 2494456 - 2494408
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaa 202  Q
    |||||||| ||||||||| || |||||||||||||| ||||||||||||    
T  2494456 tattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaa 2494408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 4398262 - 4398198
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||| |||  || ||||||||||||||||||| || | ||||||| |||||||||||||||    
T  4398262 tattatttataaattttttaatgtagtttatgaaaaaattggttatgaagatataattttcgtta 4398198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 143
Target Start/End: Original strand, 34633387 - 34633418
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||||||||||||||||||||||||||    
T  34633387 agcttatgcaaaacaacttatgcaaataaata 34633418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 143
Target Start/End: Complemental strand, 42611966 - 42611935
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||||||||||||||||||||||||||    
T  42611966 agcttatgcaaaacaacttatgcaaataaata 42611935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 52274202 - 52274107
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||||||||    |||||||||||||  ||||||| | || |||||||| ||||| | || ||||||| ||| ||||||||| ||||||    
T  52274202 cttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgag 52274107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 1374462 - 1374384
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||| |||||||||||||||| |  | |||||| || |||  ||||||||| |  ||||||||||||||    
T  1374462 gagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaa 1374384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 3564207 - 3564285
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| |||||| |||||||||    ||||| |||||||  |||| |||| || ||||||||||||||    
T  3564207 gagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaa 3564285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 18630940 - 18630882
Alignment:
Q  165 agcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||| |||||||||||||| | || ||||||| ||| | ||||||||||||||    
T  18630940 agcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgag 18630882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 40699343 - 40699421
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| ||||||||||||||||  | |||||||| |     ||||||||| || ||||||||||||||    
T  40699343 gagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaa 40699421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 46650276 - 46650370
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||    || ||||||||||  |||  |||| | ||||||||||||||| ||||||||| || | | ||||||||||||||||    
T  46650276 ttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgag 46650370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 19298223 - 19298178
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaag 166  Q
    |||||||||||||||||||||||  | |||||||||||||| ||||    
T  19298223 aaaacaacttatgcaaataaataaatttttatgtattatttataag 19298178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 19414113 - 19414166
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattattt 161  Q
    |||||||||||  |||||| ||||||||||||||||  | ||||||||||||||    
T  19414113 ttagagcttatagaaaacagcttatgcaaataaataagtttttatgtattattt 19414166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 2405213 - 2405276
Alignment:
Q  149 ttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatttt 213  Q
    ||||||||||||  ||||||||| ||||||||||||||||| |||| ||||| | ||| ||||||    
T  2405213 ttatgtattatta-taagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaatttt 2405276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 7148776 - 7148868
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||||||||    |||||||||||||  ||||||||| || ||||||| |||||| | || |||| || ||| ||||||| |||||    
T  7148776 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagt 7148868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 7206685 - 7206573
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    ||||||||||| |||| ||||||||||| ||||    ||||| |||||||    ||| |||||| |||||||||||||| | |  ||||||| ||| | |    
T  7206685 gagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaagt 7206586  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  7206585 tttcgttagtgag 7206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 8601231 - 8601299
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||| ||||| ||| ||||||||||||||||| |  | ||||||| ||| |||||| ||||||||    
T  8601231 tattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgttagtga 8601299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 9319043 - 9319075
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    |||||||||||||||||||||| ||||||||||    
T  9319043 gagcttatgcaaaacaacttatacaaataaata 9319075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 12495744 - 12495665
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt--taatgtagtttatgaaaa 189  Q
    |||||| |||||||| ||||||||||||||||    |||||||||||||  |||||||||   || ||||||||||||||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaa 12495665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 31736485 - 31736453
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||||||||||||||||| |||||||||    
T  31736485 gagcttatgcaaaacaacttatgtaaataaata 31736453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 39931602 - 39931531
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||  |||||| |||| |||||||||||||| |   |||||||| ||| ||||||||||||||||    
T  39931602 atgtattatttacaagctt-ttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgag 39931531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 6e-24; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 38471890 - 38471778
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| |||||||||||||||||   ||||||| |||| | ||||||| || |||||||||||||||| | ||||||||||  || |||    
T  38471890 gagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaat 38471791  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  38471790 tttcgttagtgag 38471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 8441457 - 8441536
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||| || ||||||||||||||||| | |||||||||||||| |||| ||||||||||||||||||||    
T  8441457 ttagagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 32366134 - 32366245
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| ||||||||||||||||||  | |||||||||||||| |||| || | || |||||||||||||| | ||||||||||||||     
T  32366134 ttagagcttatataaaataacttatgcaaataaataagtttttatgtattatttataag-ttttaaaggtagtttatgaaaaaacagtttatgaatatac 32366232  T
Q  208 aattttcgttagt 220  Q
     ||||||||||||    
T  32366233 gattttcgttagt 32366245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 33321411 - 33321299
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||||||| ||||||||||||    ||||||| |||||  ||||||||| || |||||||||||||| | || ||||||| ||| |||    
T  33321411 gagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 33321312  T
Q  211 tttcgttagtgag 223  Q
    ||| |||||||||    
T  33321311 ttttgttagtgag 33321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 35515582 - 35515503
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||| ||||||  ||| | |||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  35515582 ttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttatgaa 35515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 38216010 - 38216118
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| ||||||||||||||||     ||||||||||||  ||||||||| || |||||||| ||||| ||||  |||||| ||| |||    
T  38216010 gagcttatgcaaaacagcttatgcaaataaata----attatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaat 38216105  T
Q  211 tttcgttagtgag 223  Q
    |||||||||||||    
T  38216106 tttcgttagtgag 38216118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 27881099 - 27880989
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||| | ||||||||||||||||| |  ||||||||||||| |||| || |||| |||| ||||||||| | | ||||||||  |||    
T  27881099 ttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatgaaagtat 27881000  T
Q  208 aattttcgtta 218  Q
    | |||||||||    
T  27880999 acttttcgtta 27880989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 735991 - 736063
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||| |||||||||||| || ||||||||||| |||||||||||| |||||||||| |||| ||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgttattgag 736063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 2401723 - 2401612
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||| | |||||||||| ||| |||| || |||| |||||||||||||| || | ||||||| |||     
T  2401723 ttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttataag-tttttaaggtagtttatgaaaaaatgggttatgaaaatac 2401625  T
Q  208 aattttcgttagt 220  Q
    |||||| ||||||    
T  2401624 aatttttgttagt 2401612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 15155802 - 15155878
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||| ||||||||||||| ||||||||||   |||||||||||||| ||| |||||||||| ||||||||||||    
T  15155802 gcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaa 15155878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 21788448 - 21788556
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttc 214  Q
    |||||||||||| ||||||||||||||||    ||||| |||||||  ||||||||||||  ||||||||||||| | |  ||||||| ||| |||||||    
T  21788448 ttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttc 21788547  T
Q  215 gttagtgag 223  Q
    |||||||||    
T  21788548 gttagtgag 21788556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 22898458 - 22898347
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| ||||||||||||||||||  | |||||||||||||| |||  || |||| |||||||||||||| || | ||||||| |||     
T  22898458 ttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataa-atttttaaggtagtttatgaaaaaatgggttatgaaaatac 22898360  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  22898359 aattttcgttagt 22898347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 29774733 - 29774844
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||||| |||||||||||||||||||||    |||||| ||||||  | || ||||||| |||||||||||||| |  | ||||||| ||| ||||    
T  29774733 agcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaatt 29774832  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  29774833 ttcgttagtgag 29774844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 8343080 - 8342991
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttag 219  Q
    ||||||||||| |||||| |||||||||||||  ||||||||| |||||| |||||| ||| ||| |||||||| ||| ||||||||||||    
T  8343080 ttatgcaaatacatatttttttatgtattatta-taagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgttag 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 12267005 - 12267095
Alignment:
Q  133 gcaaataaat-atttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||||| |||| ||| |||||||||| |||||||||  |||||||||||||||| |||| ||||||| ||||||||||  |||||||    
T  12267005 gcaaataaatgatttttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttttattagtga 12267095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 4004821 - 4004918
Alignment:
Q  126 aacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||||| |  |||||||| ||||  ||||||| |||| |||||||||||||||| |  |||||||  || ||||||||||||||||    
T  4004821 aacttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgag 4004918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 33321501 - 33321424
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||||||||||||||||| ||  | ||||||||||| |  ||||||||| || ||||||||||||||    
T  33321501 agcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaa 33321424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 4026913 - 4027024
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||  ||||||||||||||||    ||||||||||||   ||||||||| || |||||||||||||| | || ||||||| ||| |||    
T  4026913 gagcttatgcaaaactgcttatgcaaataaataagcttttatgtattatca-taagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 4027011  T
Q  211 tttcgttagtgag 223  Q
    ||| |||||||||    
T  4027012 ttttgttagtgag 4027024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 25836803 - 25836699
Alignment:
Q  119 gcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||| |||||||||||||||||   |||||||||||||  ||||||||| || |||||||||||||| |  | ||||||| | | |||| ||||||    
T  25836803 gcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgtta 25836704  T
Q  219 gtgag 223  Q
    |||||    
T  25836703 gtgag 25836699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 32522147 - 32522036
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| |||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||| ||||| |||     
T  32522147 ttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatgaagatac 32522049  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  32522048 aattttcgttagt 32522036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 34504995 - 34504940
Alignment:
Q  29 gaaggaagattcaagtcattgaaaagttcttggtgaagaatgctcatggaatgctt 84  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||    
T  34504995 gaaggaagattcaaagcattgaaaggttcttggtgaagaatgctcattgaatgctt 34504940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 11776981 - 11777083
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||| |||||||| |||||||    |||||||||||||| ||||||||||||  ||||||||||||| | || ||||||| ||| | |||| ||||||    
T  11776981 aaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagt 11777080  T
Q  221 gag 223  Q
    |||    
T  11777081 gag 11777083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 34913489 - 34913411
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| ||||||||||||||||    |||||||||||||  |||| |||||||  |||||||||||||    
T  34913489 gagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaa 34913411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 755841 - 755728
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg-aaaatatagtttatgaatatataa 209  Q
    ||||||||||||||||||||| |||||||| ||    |||||||||||||   ||||||||||  |||||||||| |||| | || ||||||| ||| ||    
T  755841 gagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagatacaa 755742  T
Q  210 ttttcgttagtgag 223  Q
    |||| |||||||||    
T  755741 tttttgttagtgag 755728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 36501577 - 36501502
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  ||||||||| || |||||||||||||| | || ||||||| ||| ||||| ||||||||||    
T  36501577 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgag 36501502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 37409630 - 37409737
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||| ||||||||||||||||||||||||||||    |||| ||||||||    || |||| ||||||||||||||||| | | |||||||| ||| |||    
T  37409630 gagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaat 37409729  T
Q  211 tttcgtta 218  Q
    ||| ||||    
T  37409730 ttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 39592273 - 39592348
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||| ||||||  ||||||||| || |||||||||||||||| || ||| ||| ||||||||||| ||||||||    
T  39592273 tttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttctttagtgag 39592348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 40301336 - 40301414
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| ||||||||||||    
T  40301336 ttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 12238565 - 12238476
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||||||||    || ||||||||||| |||||||||||| ||||||||||||||   |  ||||||| ||| |||||||||||||    
T  12238565 cttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaa---aacttatgaacatacaattttcgttagt 12238476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 2757171 - 2757092
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| ||||||||||||||    
T  2757171 ttagagcttatataaaacagcttatgcaaataaataagt-tttatgtattatttataag-tttttaaagtagtttatgaaaa 2757092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 24439003 - 24439084
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||| |||| |||||||||| |||    || ||||||||||| ||| |||||||  ||||||||||||||    
T  24439003 ttagagcttatgcaaagcaacatatgcaaatatataaacattaatgtattatttataatcttgttacggtagtttatgaaaa 24439084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 4090476 - 4090583
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| ||||||||||||||||    || ||||||||||  ||| ||||| || |||||  ||||||| | || ||| ||| ||| |||    
T  4090476 gagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaat 4090575  T
Q  211 tttcgtta 218  Q
    ||||||||    
T  4090576 tttcgtta 4090583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 2790170 - 2790068
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttc-tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataa 209  Q
    |||||||||||||||| ||||||||||||||||   | |||||| ||||||  ||||||||| || ||| |||||||| | | || ||||||| ||| ||    
T  2790170 gagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatgaagatacaa 2790071  T
Q  210 ttt 212  Q
    |||    
T  2790070 ttt 2790068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 7480998 - 7480952
Alignment:
Q  114 cttatgcaaaacaacttatgcaaataaatatttctttatgtattatt 160  Q
    |||||||||||||||||||||||||||||| |  ||||| |||||||    
T  7480998 cttatgcaaaacaacttatgcaaataaataatattttatatattatt 7480952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 9140828 - 9140723
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||| ||||||| | ||||||||||||||    ||||||||||||   ||| ||||| ||||||||||||| ||| | |||||||||| || || |    
T  9140828 gagcttatacaaaacatcgtatgcaaataaataaccttttatgtattatca-taaacttgtcaatgtagtttatgtaaaaacagtttatgaagatgtact 9140730  T
Q  211 tttcgtt 217  Q
    |||||||    
T  9140729 tttcgtt 9140723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 42064881 - 42064947
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||  |||||||||||| ||||||||| |||| |||  ||||||| |||| ||||||||||||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagt 42064947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 5516062 - 5516175
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg-aaaatatagtttatgaatatataa 209  Q
    |||||| ||||||||| |||||| ||| |||||    | ||||| |||||  |||| |||| ||||||||||||| |||| | ||||||| || ||| ||    
T  5516062 gagcttttgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaatacaa 5516161  T
Q  210 ttttcgttagtgag 223  Q
    ||||||||||||||    
T  5516162 ttttcgttagtgag 5516175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 12223879 - 12223951
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    ||||||||||  ||||| ||| || |||||||||||||| | |||||||||| |||  |||||| ||||||||    
T  12223879 atgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgag 12223951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 16108178 - 16108114
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||| |||| ||||||| |||||||||||||| | |  ||||||||||| |||||| ||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 17531946 - 17532013
Alignment:
Q  121 aaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||| ||||||||||||||||  | |||||||||||| | |||| || |||| ||||||||||||||    
T  17531946 aaaacagcttatgcaaataaataagtttttatgtattatctataag-tttttaaggtagtttatgaaaa 17532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 27703557 - 27703525
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    |||||||||||||||| ||||||||||||||||    
T  27703557 gagcttatgcaaaacagcttatgcaaataaata 27703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 39070843 - 39070911
Alignment:
Q  154 tattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    |||||||| ||||||| ||||  ||||||||||||| |||  |||| || |||||||||| ||||||||    
T  39070843 tattatttataagctttttaagatagtttatgaaaaaatatcttataaaaatataatttttgttagtga 39070911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 38338952 - 38338838
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | ||||  |||||||| |||| || |||| |||||||||||||| |||||||||||| ||||    
T  38338952 ttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttt-ttaaggtagtttatgaaaaaatagtttatgaagatat 38338854  T
Q  208 aattttcgttagtgag 223  Q
     |||||||||||||||    
T  38338853 gattttcgttagtgag 38338838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 34545708 - 34545629
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||  |||||| |||| ||||||||||||||||||||||    
T  34545708 ttagagcttatgcaaaataatttatgcaaataaatatgtctttatg--ttatttataagtttgttaatgtagtttatgaaaa 34545629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 37966293 - 37966216
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatg 185  Q
    |||||| |||||||||| | ||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||    
T  37966293 ttagagtttatgcaaaatagcttatgcaaataaatatttatatatgtattatttataagcttgttaacgtagtttatg 37966216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 191
Target Start/End: Complemental strand, 2019751 - 2019668
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaata 191  Q
    ||||||||||||||||||| ||||||||||||||||  || |||||||||||||  |||||||||||  |||||||| ||||||    
T  2019751 ttagagcttatgcaaaacatcttatgcaaataaataagtcattatgtattatttacaagcttgttaagatagtttataaaaata 2019668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 11988185 - 11988295
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    |||||||  ||||||| |||||||||||||||  | |||||||||||||| |||| || |||| |||||| ||||||| |  ||||||||| ||| ||||    
T  11988185 agcttatataaaacaatttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagttcatgaaaaaaccgtttatgaagatacaatt 11988283  T
Q  212 ttcgttagtgag 223  Q
    ||||||||||||    
T  11988284 ttcgttagtgag 11988295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 12607064 - 12607178
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| | ||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| |  ||||||||| |||     
T  12607064 ttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacggtttatgaagatac 12607162  T
Q  208 aattttcgttagtgag 223  Q
    ||||| ||||||||||    
T  12607163 aatttccgttagtgag 12607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 19327855 - 19327965
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataatt 211  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||  |||| ||| |||||||||||||| ||| | ||||||| || ||| ||||    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttg-taatgtagtttatggaaaaacagtttataaagatacaatt 19327953  T
Q  212 ttcgttagtgag 223  Q
    || |||| ||||    
T  19327954 tttgttaatgag 19327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 28280713 - 28280808
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||||||   |||||||||||||| |||| |||||||||||||||||||||| |  |||||||||  ||||  ||| |||||||||    
T  28280713 cttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttgttagtgag 28280808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 32924311 - 32924208
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| ||||||| |||||||||   ||||| | |||||| |||||||||| |||||||||||||||| | |  ||||||| ||| |||    
T  32924311 gagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaaat 32924212  T
Q  211 tttc 214  Q
    ||||    
T  32924211 tttc 32924208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 42102091 - 42102205
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||| ||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| |  ||| ||||| |||     
T  42102091 ttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccgttaatgaagatac 42102189  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||| ||||    
T  42102190 aattttcgttaatgag 42102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 42363418 - 42363304
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||| | ||||||||||||||||  | |||||||||||||| |||| || |||| |||||||||||||| |  ||||||||| |||     
T  42363418 ttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaccgtttatgaagatac 42363320  T
Q  208 aattttcgttagtgag 223  Q
    |||||| |||||||||    
T  42363319 aatttttgttagtgag 42363304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 16706199 - 16706121
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||  ||||||||||||||||| | |||||||||||||  |||| |||  |||||||||||||||||    
T  16706199 gagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaa 16706121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 43577205 - 43577317
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||| |  |||||||||||||||  | || ||||||||||| |||  ||||||| ||||||||| |||| | |  |||| ||||||     
T  43577205 ttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttataaatataa 43577304  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  43577305 aattttcgttagt 43577317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 19925541 - 19925656
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||| |||||| ||||||| ||||||||||||||||    ||||  |||||||| |||| ||||||| ||| |||| ||||| | | |||||||| |||     
T  19925541 ttagggcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatac 19925640  T
Q  208 aattttcgttagtgag 223  Q
    ||||||||||||||||    
T  19925641 aattttcgttagtgag 19925656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 38195471 - 38195585
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  |||||||||||||||||||||||  | ||||| |||||||| |||| || |||| |||||||| ||||| | |||||||| | |||     
T  38195471 ttagagcttatataaaacaacttatgcaaataaataagtttttatatattatttataag-tttttaaggtagtttacgaaaaaacagtttatggaaatac 38195569  T
Q  208 aattttcgttagtgag 223  Q
    |||||| |||| ||||    
T  38195570 aatttttgttaatgag 38195585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 29218315 - 29218238
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttat--gaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||| |||| ||||||| ||| |||||  ||||| |||||||||||| ||||||||||| ||||||||    
T  29218315 tttatgtattatttttaagtttgttaaggtattttataagaaaaaatagtttatgaagatataattttcattagtgag 29218238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 2563342 - 2563423
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||| ||||| |||| || |||||||||||||||  | || ||||||||||| |||| ||||||| ||||||||||||||    
T  2563342 ttagaggttatgtaaaataatttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaa 2563423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 9782210 - 9782279
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||| |||||||||||| ||||||||| |||| | |  ||||||||||| |||||||||||||    
T  9782210 atgtattatttataagcttgttaaagtagtttattaaaaaacaacttatgaatatacaattttcgttagt 9782279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 14942408 - 14942489
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||| ||||||||||||| | |||||||    ||| |||||||||| ||||||||||||  |||||||||||||    
T  14942408 ttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaa 14942489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 19925490 - 19925379
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||| ||||  |||||||||||||||    || ||||||||||| ||| |||||||| |||| ||||||||  | |  |||||||||||     
T  19925490 ttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaataacaacttatgaatatac 19925392  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  19925391 aattttcgttagt 19925379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 24350581 - 24350509
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||  ||||||||| || ||| |||||||||| |||| ||||||| |||||||||||||||||    
T  24350581 tttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagt 24350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 24867011 - 24866943
Alignment:
Q  150 tatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||||||| |||| |||||||||||||||||||||| | || |||||||  || |||||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtta 24866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 35168503 - 35168435
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgt 216  Q
    |||||||||||||  ||||||||| || |||||||||||||| | |||||||||| ||| |||||||||    
T  35168503 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgt 35168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 37411014 - 37410903
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||  ||||||  ||||| |||||||||  | |||||||||||||| |||  || |||| |||||||||||||| | |||| ||||| |||     
T  37411014 ttagagcttatataaaacagtttatgtaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatgaaaaaacagttcatgaagatac 37410916  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  37410915 aattttcgttagt 37410903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 16972455 - 16972344
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt-taatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||||| || ||||||||||||    | |||||||||||  |||| |||| ||| |||||| ||||||| | || ||||||| ||| |||    
T  16972455 agcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaat 16972356  T
Q  211 tttcgttagtga 222  Q
    ||||||||||||    
T  16972355 tttcgttagtga 16972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 38895683 - 38895757
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtga 222  Q
    ||||| |||||||  |||||||||||| |||||||||||||| ||| |||||||| ||| ||| || ||||||||    
T  38895683 tttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtga 38895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 30973973 - 30974085
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    |||||||||||||||| || |||||| ||||||| |    || ||||||||||| |||  ||||||| | |||||||||||| | |  |||||||| ||     
T  30973973 ttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaaaaacaacttatgaatttac 30974072  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  30974073 aattttcgttagt 30974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 32131427 - 32131503
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaa 187  Q
    |||||||||||||||| ||||||||||||||||    |||||| ||||||  |||| |||| || ||||||||||||    
T  32131427 gagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaa 32131503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 218333 - 218244
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||||  | |||||||||||||| |||| || |||| ||||||||||||||  || |||||||| ||| |||||||||||||    
T  218333 ttatgtaaataaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttagt 218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 694893 - 694804
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||||  | |||||||||||||| |||| || |||| ||||||||||||||  || |||||||| ||| |||||||||||||    
T  694893 ttatgtaaataaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttagt 694804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 699102 - 699013
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||||  | |||||||||||||| |||| || |||| ||||||||||||||  || |||||||| ||| |||||||||||||    
T  699102 ttatgtaaataaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttagt 699013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 731956 - 731867
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||||  | |||||||||||||| |||| || |||| ||||||||||||||  || |||||||| ||| |||||||||||||    
T  731956 ttatgtaaataaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttagt 731867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 855852 - 855763
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| |||||||||  | |||||||||||||| |||| || |||| ||||||||||||||  || |||||||| ||| |||||||||||||    
T  855852 ttatgtaaataaataaatttttatgtattatttataagttt-ttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttagt 855763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 8217004 - 8216893
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatt-tctttatgtattatttgtaagcttgt-taatgtagtttatgaaaatatagtttatgaatatata 208  Q
    |||||| ||||||| | ||||||||||| ||||   | |||||||||||||  ||| ||||| ||| ||||||||||||||  ||| ||||||| ||| |    
T  8217004 gagcttgtgcaaaatagcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagataca 8216905  T
Q  209 attttcgttagt 220  Q
    ||||||||||||    
T  8216904 attttcgttagt 8216893  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 3641212 - 3641285
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||| ||||  |||||||||  | ||||||||| |||| |||| ||||||||||||| ||||||||    
T  3641212 ttatgcaaaacaatttatt-aaataaataaatttttatgtataatttataagtttgttaatgtagtatatgaaaa 3641285  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4326308 - 4326234
Alignment:
Q  115 ttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    ||||||||||||  ||| | |||||||||  |||||||||||||||  |||| || | |||||||||||||||||    
T  4326308 ttatgcaaaacagtttagggaaataaataagtctttatgtattattcataagtttataaatgtagtttatgaaaa 4326234  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 14725046 - 14724957
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgtta 218  Q
    |||||||||||||| || | ||||| |||||||| |||| ||||||||||| |||||||||| | |  ||||| |  ||||||||||||||    
T  14725046 cttatgcaaataaagatct-tttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgtta 14724957  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 2669675 - 2669744
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||||||||| |||| ||||||| |||||||||||||| | |  ||||||||||| | ||||| |||||    
T  2669675 atgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagt 2669744  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 1089018 - 1089078
Alignment:
Q  129 ttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||||||||||||  | || ||||||||||  ||||||||| |||||| ||||||||||    
T  1089018 ttatgcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaa 1089078  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 9131190 - 9131118
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagt 220  Q
    |||||||||||||| |||||||||  || |||||| |||| | | || ||||||| ||| |||||||||||||    
T  9131190 tttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagt 9131118  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 13131418 - 13131466
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatt 160  Q
    |||||||||||||||| |||||||||||||||    |||||||||||||    
T  13131418 agcttatgcaaaacaaattatgcaaataaataagcttttatgtattatt 13131466  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 16706030 - 16706062
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    |||||||||||||||| ||||||||||||||||    
T  16706030 gagcttatgcaaaacagcttatgcaaataaata 16706062  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 28879062 - 28879122
Alignment:
Q  128 cttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaa 188  Q
    ||||||||||||||||    |||||||||||||  ||||||||| || |||||||||||||    
T  28879062 cttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 28879122  T

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Target: scaffold1088 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 1278 - 1390
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatat 207  Q
    ||||||||||||||||||||||||||||||| ||||    || || |||||||| |||| ||||||| |||||||||||||| | |  |||| ||||||     
T  1278 ttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagttataaatatac 1377  T
Q  208 aattttcgttagt 220  Q
    |||||||||||||    
T  1378 aattttcgttagt 1390  T

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Target: scaffold0012 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 178498 - 178597
Alignment:
Q  122 aaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaata-tagtttatgaatatataattttcgttagt 220  Q
    ||||||||||||||||||||||    |||||||||||||| |||| || |||| ||| |||||||||| | ||||||||||| ||| |||||||||||||    
T  178498 aaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattttcgttagt 178597  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 58967 - 58856
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataat 210  Q
    |||||||||||||| | ||| || |||||||||    |||||||||||||  |||| |||| |||||||||||||||||  || |||||||| ||| |||    
T  58967 gagcttatgcaaaaaaccttgtggaaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatacaat 58868  T
Q  211 tttcgttagtga 222  Q
    || |||||||||    
T  58867 ttccgttagtga 58856  T

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Target: scaffold0332 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 14808 - 14733
Alignment:
Q  148 tttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtgag 223  Q
    |||||||||||||  |||| || | |||||||||||||||||   ||||||| |||||| ||||||||||||||||    
T  14808 tttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgag 14733  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 1047 - 1157
Alignment:
Q  113 gcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattt 212  Q
    |||||| ||||||||||||||||||||||||    ||||| ||||||   |||| ||||||| ||| |||||| ||| |||  ||||||| ||| || ||    
T  1047 gcttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatt 1146  T
Q  213 tcgttagtgag 223  Q
    || ||||||||    
T  1147 tcattagtgag 1157  T

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Target: scaffold0512 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 4092 - 4161
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatgaaaatatagtttatgaatatataattttcgttagtg 221  Q
    ||||||||||| ||||||||| ||  ||||||||||||| |||| ||||| | ||| ||||||||||||||    
T  4092 atgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtg 4161  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 227733 - 227803
Alignment:
Q  151 atgtattatttgtaagcttgttaatgtagtttatg-aaaatatagtttatgaatatataattttcgttagt 220  Q
    ||||| ||||| |||| ||||||| |||||||||| |||| | || ||||||||||| |||||||||||||    
T  227733 atgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgttagt 227803  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 279093 - 279013
Alignment:
Q  108 ttagagcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgttaatgtagtttatgaaaa 189  Q
    |||||| ||||  |||| |||||||||||||| |||  | |||||||||||||| |||| || |||| ||||||||||||||    
T  279093 ttagagattatataaaataacttatgcaaatacataaatttttatgtattatttataag-tttttaaggtagtttatgaaaa 279013  T

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Target: scaffold0191 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 31284 - 31252
Alignment:
Q  111 gagcttatgcaaaacaacttatgcaaataaata 143  Q
    ||||||||| |||||||||||||||||||||||    
T  31284 gagcttatgtaaaacaacttatgcaaataaata 31252  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 24733 - 24812
Alignment:
Q  112 agcttatgcaaaacaacttatgcaaataaatatttctttatgtattatttgtaagcttgt--taatgtagtttatgaaaa 189  Q
    |||||| |||||||| ||||||||||||||||    |||||||||||||  |||||||||   || ||||||||||||||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaa 24812  T

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