View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11773_low_17 (Length: 255)

Name: NF11773_low_17
Description: NF11773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11773_low_17
NF11773_low_17
[»] chr8 (12 HSPs)
chr8 (140-176)||(9022602-9022638)
chr8 (141-175)||(9880666-9880700)
chr8 (142-174)||(36915573-36915605)
chr8 (141-176)||(34168371-34168406)
chr8 (142-176)||(4760722-4760756)
chr8 (141-175)||(4989432-4989466)
chr8 (142-176)||(8382399-8382433)
chr8 (142-176)||(39463213-39463247)
chr8 (142-176)||(39698830-39698864)
chr8 (142-175)||(39765783-39765816)
chr8 (142-174)||(9304800-9304832)
chr8 (142-174)||(13368115-13368147)
[»] chr1 (30 HSPs)
chr1 (140-176)||(13408244-13408280)
chr1 (142-176)||(12002200-12002234)
chr1 (142-176)||(48025417-48025451)
chr1 (142-175)||(28200390-28200423)
chr1 (143-176)||(43358364-43358397)
chr1 (142-174)||(46554754-46554786)
chr1 (142-176)||(2458962-2458996)
chr1 (142-176)||(2610992-2611026)
chr1 (142-176)||(7375243-7375277)
chr1 (142-176)||(9915651-9915685)
chr1 (141-175)||(15646984-15647018)
chr1 (142-176)||(17919985-17920019)
chr1 (142-176)||(18794705-18794739)
chr1 (142-176)||(24884366-24884400)
chr1 (142-176)||(31491680-31491714)
chr1 (142-176)||(32807101-32807135)
chr1 (145-175)||(34047157-34047187)
chr1 (142-176)||(34047399-34047433)
chr1 (142-176)||(44024499-44024533)
chr1 (142-176)||(48259775-48259809)
chr1 (142-176)||(50094181-50094215)
chr1 (142-176)||(52125046-52125080)
chr1 (142-175)||(1430448-1430481)
chr1 (142-175)||(14593268-14593301)
chr1 (142-175)||(26352002-26352035)
chr1 (142-171)||(27721274-27721303)
chr1 (142-175)||(34032001-34032034)
chr1 (142-175)||(46045928-46045961)
chr1 (142-175)||(46286986-46287019)
chr1 (142-174)||(13408430-13408462)
[»] chr7 (27 HSPs)
chr7 (141-176)||(40339412-40339447)
chr7 (142-176)||(37815931-37815965)
chr7 (142-174)||(10599168-10599200)
chr7 (141-176)||(6522026-6522061)
chr7 (141-176)||(22297951-22297986)
chr7 (141-172)||(33845336-33845367)
chr7 (141-176)||(40299045-40299080)
chr7 (142-176)||(1741946-1741980)
chr7 (145-175)||(4268568-4268598)
chr7 (142-176)||(8603928-8603962)
chr7 (142-176)||(27947665-27947699)
chr7 (145-175)||(32097322-32097352)
chr7 (142-176)||(34012117-34012151)
chr7 (142-176)||(36915576-36915610)
chr7 (134-176)||(37502266-37502308)
chr7 (144-174)||(41137685-41137715)
chr7 (142-176)||(44453340-44453374)
chr7 (142-176)||(45933499-45933533)
chr7 (142-176)||(45948794-45948828)
chr7 (142-175)||(5723194-5723227)
chr7 (141-174)||(10599572-10599605)
chr7 (142-171)||(18886848-18886877)
chr7 (142-175)||(44057764-44057797)
chr7 (143-175)||(23935376-23935408)
chr7 (142-174)||(23935630-23935662)
chr7 (142-174)||(24133276-24133308)
chr7 (142-174)||(32501914-32501946)
[»] chr4 (26 HSPs)
chr4 (141-176)||(44572036-44572071)
chr4 (142-176)||(47321350-47321384)
chr4 (142-175)||(7905923-7905956)
chr4 (135-176)||(10573325-10573366)
chr4 (135-176)||(39982049-39982090)
chr4 (142-175)||(50623292-50623325)
chr4 (142-174)||(30780294-30780326)
chr4 (137-176)||(12241727-12241766)
chr4 (141-176)||(49089414-49089449)
chr4 (141-176)||(50203031-50203066)
chr4 (142-176)||(17499885-17499919)
chr4 (136-174)||(29840260-29840298)
chr4 (142-176)||(37654617-37654651)
chr4 (142-176)||(47817690-47817724)
chr4 (142-176)||(52847970-52848004)
chr4 (142-176)||(54042098-54042132)
chr4 (142-175)||(17499630-17499663)
chr4 (142-175)||(19451383-19451416)
chr4 (142-175)||(37624753-37624786)
chr4 (142-175)||(38510172-38510205)
chr4 (142-175)||(38991679-38991712)
chr4 (142-175)||(50621355-50621388)
chr4 (142-174)||(32141132-32141164)
chr4 (142-174)||(45043759-45043791)
chr4 (142-174)||(53814413-53814445)
chr4 (142-174)||(56556194-56556226)
[»] chr3 (29 HSPs)
chr3 (133-176)||(30431066-30431109)
chr3 (141-176)||(37225759-37225794)
chr3 (142-176)||(31290886-31290920)
chr3 (135-176)||(30431326-30431367)
chr3 (142-175)||(42886946-42886979)
chr3 (140-176)||(33194192-33194228)
chr3 (136-176)||(44648316-44648356)
chr3 (142-176)||(3152967-3153001)
chr3 (142-176)||(4392150-4392184)
chr3 (141-175)||(20512405-20512439)
chr3 (142-176)||(20512660-20512694)
chr3 (141-175)||(35557921-35557955)
chr3 (142-176)||(38277959-38277993)
chr3 (142-176)||(38363998-38364032)
chr3 (142-176)||(44648565-44648599)
chr3 (142-176)||(51397964-51397998)
chr3 (142-176)||(54261370-54261404)
chr3 (142-175)||(4759487-4759520)
chr3 (142-175)||(30186328-30186361)
chr3 (143-176)||(30186382-30186415)
chr3 (142-175)||(32492341-32492374)
chr3 (145-174)||(36844906-36844935)
chr3 (142-175)||(43169289-43169322)
chr3 (142-175)||(45213883-45213916)
chr3 (142-174)||(3152716-3152748)
chr3 (135-175)||(30706667-30706707)
chr3 (136-176)||(38363734-38363774)
chr3 (147-175)||(42857008-42857036)
chr3 (142-174)||(50646274-50646306)
[»] chr2 (20 HSPs)
chr2 (142-176)||(12342300-12342334)
chr2 (135-176)||(25332778-25332819)
chr2 (136-176)||(1422097-1422137)
chr2 (136-176)||(4132972-4133012)
chr2 (142-173)||(6247675-6247706)
chr2 (142-176)||(441143-441177)
chr2 (141-175)||(14286127-14286161)
chr2 (142-176)||(16807429-16807463)
chr2 (142-176)||(16846710-16846744)
chr2 (142-176)||(27964538-27964572)
chr2 (142-176)||(32228175-32228209)
chr2 (142-176)||(37724201-37724235)
chr2 (142-176)||(40987194-40987228)
chr2 (142-176)||(40987420-40987454)
chr2 (141-174)||(16807683-16807716)
chr2 (141-174)||(16846964-16846997)
chr2 (142-175)||(35799423-35799456)
chr2 (142-175)||(45081818-45081851)
chr2 (133-173)||(13562203-13562243)
chr2 (142-174)||(34546497-34546529)
[»] chr6 (10 HSPs)
chr6 (142-175)||(23936495-23936528)
chr6 (142-176)||(10540673-10540707)
chr6 (142-176)||(17246770-17246804)
chr6 (142-176)||(24163878-24163912)
chr6 (142-176)||(29399900-29399934)
chr6 (142-176)||(32429240-32429274)
chr6 (142-176)||(34519290-34519324)
chr6 (142-175)||(30627289-30627322)
chr6 (142-175)||(34439320-34439353)
chr6 (135-175)||(29400142-29400182)
[»] chr5 (20 HSPs)
chr5 (142-175)||(15400380-15400413)
chr5 (136-176)||(8336313-8336353)
chr5 (144-176)||(24436454-24436486)
chr5 (142-174)||(29653680-29653712)
chr5 (136-175)||(31557246-31557285)
chr5 (142-176)||(15566452-15566486)
chr5 (142-176)||(26660961-26660995)
chr5 (142-176)||(26932554-26932588)
chr5 (142-176)||(29653424-29653458)
chr5 (142-176)||(34972562-34972596)
chr5 (142-176)||(42104229-42104263)
chr5 (142-176)||(42978230-42978264)
chr5 (142-175)||(3306174-3306207)
chr5 (142-175)||(4631127-4631160)
chr5 (142-175)||(10344855-10344888)
chr5 (147-176)||(34171363-34171392)
chr5 (142-175)||(38369827-38369860)
chr5 (142-175)||(39804215-39804248)
chr5 (142-174)||(2729953-2729985)
chr5 (142-174)||(4371559-4371591)
[»] scaffold0565 (1 HSPs)
scaffold0565 (142-176)||(9572-9606)
[»] scaffold0047 (1 HSPs)
scaffold0047 (142-176)||(70619-70653)
[»] scaffold0332 (1 HSPs)
scaffold0332 (142-175)||(3733-3766)
[»] scaffold0015 (1 HSPs)
scaffold0015 (142-174)||(21248-21280)


Alignment Details
Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 9022638 - 9022602
Alignment:
Q  140 ggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||||    
T  9022638 ggtactccctccgttttaaaatgagtgtcgttttagc 9022602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 9880700 - 9880666
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||||||||||    
T  9880700 gtactccctccgttttaaaatgagtgtcgttttag 9880666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 36915605 - 36915573
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||||    
T  36915605 tactccctccgttttaaaatgagtgtcgtttta 36915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 34168406 - 34168371
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34168406 gtactccctccgtttcaaaatgagtgtcgttttagc 34168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 4760756 - 4760722
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||| ||||||||||||||    
T  4760756 tactccctccgttttaaaataagtgtcgttttagc 4760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 4989432 - 4989466
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||| ||||||||||||||||||||||||||||||    
T  4989432 gtacaccctccgttttaaaatgagtgtcgttttag 4989466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 8382399 - 8382433
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  8382399 tactccatccgttttaaaatgagtgtcgttttagc 8382433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 39463213 - 39463247
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  39463213 tactccctccgtttcaaaatgagtgtcgttttagc 39463247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 39698864 - 39698830
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  39698864 tactccctccgtttcaaaatgagtgtcgttttagc 39698830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 39765783 - 39765816
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||| |||||||||||||||||||    
T  39765783 tactccctccgtttcaaaatgagtgtcgttttag 39765816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 9304832 - 9304800
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    ||||| |||||||||||||||||||||||||||    
T  9304832 tactctctccgttttaaaatgagtgtcgtttta 9304800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 13368147 - 13368115
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||| ||||||    
T  13368147 tactccctccgttttaaaatgagtgttgtttta 13368115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 13408244 - 13408280
Alignment:
Q  140 ggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||||    
T  13408244 ggtactccctccgttttaaaatgagtgtcgttttagc 13408280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 12002200 - 12002234
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  12002200 tactccctccgttttaaaatgagtgtcgttttagc 12002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 48025451 - 48025417
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  48025451 tactccctccgttttaaaatgagtgtcgttttagc 48025417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 28200423 - 28200390
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  28200423 tactccctccgttttaaaatgagtgtcgttttag 28200390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 43358397 - 43358364
Alignment:
Q  143 actccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||||||||    
T  43358397 actccctccgttttaaaatgagtgtcgttttagc 43358364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 46554754 - 46554786
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||||    
T  46554754 tactccctccgttttaaaatgagtgtcgtttta 46554786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 2458962 - 2458996
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  2458962 tactccctccgtttcaaaatgagtgtcgttttagc 2458996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 2611026 - 2610992
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  2611026 tactccatccgttttaaaatgagtgtcgttttagc 2610992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 7375243 - 7375277
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  7375243 tactccctccgtttcaaaatgagtgtcgttttagc 7375277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 9915685 - 9915651
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  9915685 tactccctccgtttcaaaatgagtgtcgttttagc 9915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 15646984 - 15647018
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||| ||||||||||||||||||||||||    
T  15646984 gtactccctctgttttaaaatgagtgtcgttttag 15647018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 17920019 - 17919985
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  17920019 tactccctccgttttaaaatgagtgtcgctttagc 17919985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 18794739 - 18794705
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||| ||||||||||||    
T  18794739 tactccctccgttttaaaatgattgtcgttttagc 18794705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 24884366 - 24884400
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||| ||||||||||||    
T  24884366 tactccctccgttttaaaatgaatgtcgttttagc 24884400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 31491680 - 31491714
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||||||||||||||||||    
T  31491680 tactctctccgttttaaaatgagtgtcgttttagc 31491714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 32807135 - 32807101
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  32807135 tactccctccgtttcaaaatgagtgtcgttttagc 32807101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 34047157 - 34047187
Alignment:
Q  145 tccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||||||    
T  34047157 tccctccgttttaaaatgagtgtcgttttag 34047187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 34047433 - 34047399
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  34047433 tactccatccgttttaaaatgagtgtcgttttagc 34047399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 44024499 - 44024533
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  44024499 tactccctccgttttaaaatgagtgtcgctttagc 44024533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 48259775 - 48259809
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  48259775 tactccctccgtttcaaaatgagtgtcgttttagc 48259809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 50094181 - 50094215
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  50094181 tactccatccgttttaaaatgagtgtcgttttagc 50094215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 52125046 - 52125080
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  52125046 tactccatccgttttaaaatgagtgtcgttttagc 52125080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 1430448 - 1430481
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||| |||||||||||||||||||||||    
T  1430448 tactccctccattttaaaatgagtgtcgttttag 1430481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 14593268 - 14593301
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||| |||||||    
T  14593268 tactccctccgttttaaaatgagtgttgttttag 14593301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 26352002 - 26352035
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  26352002 tactccatccgttttaaaatgagtgtcgttttag 26352035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 171
Target Start/End: Complemental strand, 27721303 - 27721274
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtt 171  Q
    ||||||||||||||||||||||||||||||    
T  27721303 tactccctccgttttaaaatgagtgtcgtt 27721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 34032001 - 34032034
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  34032001 tactccttccgttttaaaatgagtgtcgttttag 34032034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 46045928 - 46045961
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||| ||||||||||||||||||||||||||    
T  46045928 tactccccccgttttaaaatgagtgtcgttttag 46045961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 46287019 - 46286986
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||| ||||||||||||||||||||||||    
T  46287019 tactccctctgttttaaaatgagtgtcgttttag 46286986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 13408462 - 13408430
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||| ||||||||||||||||||||||||    
T  13408462 tactcccttcgttttaaaatgagtgtcgtttta 13408430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 40339412 - 40339447
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||||||||||    
T  40339412 gtactccctccgttttaaaatgagtgtcgttttagc 40339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 37815965 - 37815931
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  37815965 tactccctccgttttaaaatgagtgtcgttttagc 37815931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 10599168 - 10599200
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||||    
T  10599168 tactccctccgttttaaaatgagtgtcgtttta 10599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 6522061 - 6522026
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6522061 gtactccctccgttttaaaatgagtgtcgctttagc 6522026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 22297951 - 22297986
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22297951 gtactccatccgttttaaaatgagtgtcgttttagc 22297986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 172
Target Start/End: Original strand, 33845336 - 33845367
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttt 172  Q
    ||||||||||||||||||||||||||||||||    
T  33845336 gtactccctccgttttaaaatgagtgtcgttt 33845367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 40299080 - 40299045
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40299080 gtactccctccgtttcaaaatgagtgtcgttttagc 40299045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 1741946 - 1741980
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgttttagc 1741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 4268568 - 4268598
Alignment:
Q  145 tccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||||||    
T  4268568 tccctccgttttaaaatgagtgtcgttttag 4268598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 8603928 - 8603962
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||||||||||||||||||    
T  8603928 tactctctccgttttaaaatgagtgtcgttttagc 8603962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 27947699 - 27947665
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  27947699 tactccctccgtttcaaaatgagtgtcgttttagc 27947665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 32097352 - 32097322
Alignment:
Q  145 tccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||||||    
T  32097352 tccctccgttttaaaatgagtgtcgttttag 32097322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 34012117 - 34012151
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||||||||||||||||||    
T  34012117 tactcactccgttttaaaatgagtgtcgttttagc 34012151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 36915610 - 36915576
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||||||||||||||||||    
T  36915610 tactctctccgttttaaaatgagtgtcgttttagc 36915576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 37502266 - 37502308
Alignment:
Q  134 caaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||    
T  37502266 caaaatagtactccatccgtttcaaaatgagtgtcgttttagc 37502308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 174
Target Start/End: Original strand, 41137685 - 41137715
Alignment:
Q  144 ctccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||    
T  41137685 ctccctccgttttaaaatgagtgtcgtttta 41137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 44453374 - 44453340
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  44453374 tactccttccgttttaaaatgagtgtcgttttagc 44453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 45933499 - 45933533
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  45933499 tactccctccgttttaaaatgagtgtcgctttagc 45933533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 45948828 - 45948794
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  45948828 tactccttccgttttaaaatgagtgtcgttttagc 45948794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 5723227 - 5723194
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  5723227 tactccatccgttttaaaatgagtgtcgttttag 5723194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 10599605 - 10599572
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| |||||||||||||||||||||||||||    
T  10599605 gtactctctccgttttaaaatgagtgtcgtttta 10599572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 171
Target Start/End: Complemental strand, 18886877 - 18886848
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtt 171  Q
    ||||||||||||||||||||||||||||||    
T  18886877 tactccctccgttttaaaatgagtgtcgtt 18886848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 44057797 - 44057764
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||| |||||||||||||||||||    
T  44057797 tactccctccgtttcaaaatgagtgtcgttttag 44057764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 23935376 - 23935408
Alignment:
Q  143 actccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||| |||||||||||||||||||||||||||    
T  23935376 actccatccgttttaaaatgagtgtcgttttag 23935408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 23935662 - 23935630
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||| ||||    
T  23935662 tactccctccgttttaaaatgagtgtcgcttta 23935630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 24133308 - 24133276
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||| ||||||    
T  24133308 tactccctccgttttaaaatgagtgttgtttta 24133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 32501946 - 32501914
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||| ||||||||||||||||||||||    
T  32501946 tactccctccattttaaaatgagtgtcgtttta 32501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 44572071 - 44572036
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||||||||||    
T  44572071 gtactccctccgttttaaaatgagtgtcgttttagc 44572036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 47321384 - 47321350
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  47321384 tactccctccgttttaaaatgagtgtcgttttagc 47321350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 7905923 - 7905956
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  7905923 tactccctccgttttaaaatgagtgtcgttttag 7905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 10573366 - 10573325
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  10573366 aaaatggtactccctctattttaaaatgagtgtcgttttagc 10573325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 39982049 - 39982090
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  39982049 aaaatagtattccctccgttttaaaatgagtgtcgttttagc 39982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 50623325 - 50623292
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  50623325 tactccctccgttttaaaatgagtgtcgttttag 50623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 30780326 - 30780294
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||||    
T  30780326 tactccctccgttttaaaatgagtgtcgtttta 30780294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 12241766 - 12241727
Alignment:
Q  137 aatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  12241766 aatggtactccatccgttttaaaatgagtgtcattttagc 12241727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 49089414 - 49089449
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||| ||||||||||||||||||||    
T  49089414 gtactccctccgtttcaaaatgagtgtcgttttagc 49089449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 50203031 - 50203066
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||| ||||||||||||||||||||||||||||    
T  50203031 gtactccatccgttttaaaatgagtgtcgttttagc 50203066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 17499919 - 17499885
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  17499919 tactccctccgttttaaaatgagtgtcgatttagc 17499885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 29840298 - 29840260
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  29840298 aaatagtactccctccgtttcaaaatgagtgtcgtttta 29840260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 37654651 - 37654617
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttagc 37654617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 47817690 - 47817724
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  47817690 tactccctccgtttcaaaatgagtgtcgttttagc 47817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 52847970 - 52848004
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||| ||||||||    
T  52847970 tactccctccgttttaaaatgagtgttgttttagc 52848004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 54042098 - 54042132
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  54042098 tactccatccgttttaaaatgagtgtcgttttagc 54042132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 17499630 - 17499663
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||| ||||||||||||||||||||||||||||    
T  17499630 tactctctccgttttaaaatgagtgtcgttttag 17499663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 19451416 - 19451383
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||| ||||||    
T  19451416 tactccctccgttttaaaatgagtgtcattttag 19451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 37624786 - 37624753
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  37624786 tactccatccgttttaaaatgagtgtcgttttag 37624753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 38510172 - 38510205
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  38510172 tactccatccgttttaaaatgagtgtcgttttag 38510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 38991679 - 38991712
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||| |||||||||||||||||||||||||||||    
T  38991679 tacttcctccgttttaaaatgagtgtcgttttag 38991712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 50621388 - 50621355
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||| |||||||||||||||||||||||||||||    
T  50621388 tacttcctccgttttaaaatgagtgtcgttttag 50621355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 32141164 - 32141132
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||| ||||||||||||||||||    
T  32141164 tactccctccgtttcaaaatgagtgtcgtttta 32141132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 45043791 - 45043759
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| ||||||||||||||||||||||||||    
T  45043791 tactccatccgttttaaaatgagtgtcgtttta 45043759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 53814413 - 53814445
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| ||||||||||||||||||||||||||    
T  53814413 tactccatccgttttaaaatgagtgtcgtttta 53814445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 56556194 - 56556226
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||| ||||    
T  56556194 tactccctccgttttaaaatgagtgtcgcttta 56556226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 30431066 - 30431109
Alignment:
Q  133 gcaaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  30431066 gcaaaatggtactccctctgtttcaaaatgagtgtcgttttagc 30431109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 176
Target Start/End: Complemental strand, 37225794 - 37225759
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||||||||||    
T  37225794 gtactccctccgttttaaaatgagtgtcgttttagc 37225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 31290886 - 31290920
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  31290886 tactccctccgttttaaaatgagtgtcgttttagc 31290920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 30431367 - 30431326
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  30431367 aaaatgctactccctccgttttaaaatgagtgtcattttagc 30431326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 42886979 - 42886946
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  42886979 tactccctccgttttaaaatgagtgtcgttttag 42886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 33194228 - 33194192
Alignment:
Q  140 ggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33194228 ggtactccctccattttaaaatgagtgtcgttttagc 33194192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 44648316 - 44648356
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  44648316 aaatgttactccctccgtttcaaaatgagtgtcgttttagc 44648356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 3153001 - 3152967
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||| |||||||    
T  3153001 tactccctccgttttaaaatgagtgtcattttagc 3152967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 4392150 - 4392184
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||||||||||||||||||||||||||    
T  4392150 tactacctccgttttaaaatgagtgtcgttttagc 4392184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 20512405 - 20512439
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||| |||||    
T  20512405 gtactccctccgttttaaaatgagtgtcgctttag 20512439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 20512694 - 20512660
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  20512694 tactccctccgtttcaaaatgagtgtcgttttagc 20512660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 35557955 - 35557921
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||| |||||    
T  35557955 gtactccctccgttttaaaatgagtgtcgatttag 35557921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 38277993 - 38277959
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||| ||||||||||||||||||||||||    
T  38277993 tactccctccattttaaaatgagtgtcgttttagc 38277959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 38364032 - 38363998
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||||||||||||||||||    
T  38364032 tactctctccgttttaaaatgagtgtcgttttagc 38363998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 44648599 - 44648565
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  44648599 tactccctccgtttcaaaatgagtgtcgttttagc 44648565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 51397964 - 51397998
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  51397964 tactccatccgttttaaaatgagtgtcgttttagc 51397998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 54261370 - 54261404
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  54261370 tactccctccgtttcaaaatgagtgtcgttttagc 54261404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4759520 - 4759487
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||| |||||||||||||||||||||||    
T  4759520 tactccctccattttaaaatgagtgtcgttttag 4759487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 30186328 - 30186361
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  30186328 tactccatccgttttaaaatgagtgtcgttttag 30186361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 30186415 - 30186382
Alignment:
Q  143 actccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| |||||||||||||||||||||||||||||    
T  30186415 actctctccgttttaaaatgagtgtcgttttagc 30186382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 32492374 - 32492341
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||| |||||||||||||||||||    
T  32492374 tactccctccgtttcaaaatgagtgtcgttttag 32492341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 174
Target Start/End: Complemental strand, 36844935 - 36844906
Alignment:
Q  145 tccctccgttttaaaatgagtgtcgtttta 174  Q
    ||||||||||||||||||||||||||||||    
T  36844935 tccctccgttttaaaatgagtgtcgtttta 36844906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 43169289 - 43169322
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||| |||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttag 43169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 45213916 - 45213883
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||| |||||||||||||||||||||||||||||    
T  45213916 tacttcctccgttttaaaatgagtgtcgttttag 45213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 3152716 - 3152748
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    ||||||||| |||||||||||||||||||||||    
T  3152716 tactccctctgttttaaaatgagtgtcgtttta 3152748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 30706707 - 30706667
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||| ||||||||||||||| ||||||||||||| |||||    
T  30706707 aaaatagtactccctccgtttcaaaatgagtgtcgctttag 30706667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 38363734 - 38363774
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  38363734 aaatagtactccatctgttttaaaatgagtgtcgttttagc 38363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 42857008 - 42857036
Alignment:
Q  147 cctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||||||||||    
T  42857008 cctccgttttaaaatgagtgtcgttttag 42857036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 50646306 - 50646274
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| ||||||||||||||||||||||||||    
T  50646306 tactccttccgttttaaaatgagtgtcgtttta 50646274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 12342334 - 12342300
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||||    
T  12342334 tactccctccgttttaaaatgagtgtcgttttagc 12342300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 25332819 - 25332778
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  25332819 aaaatgttactccctccgttttaaaatgagtgtcgctttagc 25332778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 1422097 - 1422137
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  1422097 aaatagtactccgtccgttttaaaatgagtgtcgttttagc 1422137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 4132972 - 4133012
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  4132972 aaatgatactccctccgtttcaaaatgagtgtcgttttagc 4133012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 6247675 - 6247706
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttt 173  Q
    ||||||||||||||||||||||||||||||||    
T  6247675 tactccctccgttttaaaatgagtgtcgtttt 6247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 441143 - 441177
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  441143 tactccctccgtttcaaaatgagtgtcgttttagc 441177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 14286161 - 14286127
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||| |||||||||||||||||||||||||||||    
T  14286161 gtacttcctccgttttaaaatgagtgtcgttttag 14286127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 16807429 - 16807463
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  16807429 tactccctccgttttaaaatgagtgtcgctttagc 16807463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 16846710 - 16846744
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  16846710 tactccctccgttttaaaatgagtgtcgctttagc 16846744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 27964572 - 27964538
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  27964572 tactccctccgtttcaaaatgagtgtcgttttagc 27964538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 32228209 - 32228175
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  32228209 tactccatccgttttaaaatgagtgtcgttttagc 32228175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 37724201 - 37724235
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  37724201 tactccctccgttttaaaatgagtgtcgctttagc 37724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 40987194 - 40987228
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  40987194 tactccctccgttttaaaatgagtgtcgctttagc 40987228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 40987454 - 40987420
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  40987454 tactccatccgttttaaaatgagtgtcgttttagc 40987420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 16807716 - 16807683
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| |||||||||||||||||||||||||||    
T  16807716 gtactctctccgttttaaaatgagtgtcgtttta 16807683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 16846997 - 16846964
Alignment:
Q  141 gtactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| |||||||||||||||||||||||||||    
T  16846997 gtactctctccgttttaaaatgagtgtcgtttta 16846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 35799456 - 35799423
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||| |||||||||||    
T  35799456 tactccctccgttttaaaatgaatgtcgttttag 35799423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 45081818 - 45081851
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  45081818 tactccatccgttttaaaatgagtgtcgttttag 45081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 13562243 - 13562203
Alignment:
Q  133 gcaaaatggtactccctccgttttaaaatgagtgtcgtttt 173  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  13562243 gcaaaatattactccctccattttaaaatgagtgtcgtttt 13562203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 34546529 - 34546497
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||| ||||||||||||||||||    
T  34546529 tactccctccgtttcaaaatgagtgtcgtttta 34546497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 23936495 - 23936528
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  23936495 tactccctccgttttaaaatgagtgtcgttttag 23936528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 10540707 - 10540673
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||||||||||||||||||||||||||    
T  10540707 tacttcctccgttttaaaatgagtgtcgttttagc 10540673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 17246804 - 17246770
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  17246804 tactccctccgtttcaaaatgagtgtcgttttagc 17246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 24163912 - 24163878
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||| |||||||    
T  24163912 tactccctccgttttaaaatgagtgtcattttagc 24163878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 29399900 - 29399934
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  29399900 tactccctccgtttcaaaatgagtgtcgttttagc 29399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 32429240 - 32429274
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  32429240 tactccatccgttttaaaatgagtgtcgttttagc 32429274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 34519324 - 34519290
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  34519324 tactccatccgttttaaaatgagtgtcgttttagc 34519290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 30627322 - 30627289
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||| |||||||||||||||||||||||||||||    
T  30627322 tacttcctccgttttaaaatgagtgtcgttttag 30627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 34439320 - 34439353
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  34439320 tactccttccgttttaaaatgagtgtcgttttag 34439353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 29400182 - 29400142
Alignment:
Q  135 aaaatggtactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| ||||||||||||||||||||| |||| |||||||    
T  29400182 aaaatgttactccctccgttttaaaatgtgtgttgttttag 29400142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 15400413 - 15400380
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||||||||||    
T  15400413 tactccctccgttttaaaatgagtgtcgttttag 15400380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 8336313 - 8336353
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  8336313 aaattgtactccctccattttaaaatgagtgtcgttttagc 8336353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 24436454 - 24436486
Alignment:
Q  144 ctccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||||||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagc 24436486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 29653712 - 29653680
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||||||||||||||||||||||    
T  29653712 tactccctccgttttaaaatgagtgtcgtttta 29653680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 31557246 - 31557285
Alignment:
Q  136 aaatggtactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  31557246 aaatgatactccctccgttttaaaacgagtgtcgttttag 31557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 15566452 - 15566486
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  15566452 tactccctccgttttaaaatgagtgtcgctttagc 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 26660995 - 26660961
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  26660995 tactccctccgttttaaaatgagtgtcgctttagc 26660961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 26932588 - 26932554
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  26932588 tactccctccgttttaaaatgagtgtcgctttagc 26932554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 29653424 - 29653458
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||| ||||||||||||||||||||||||    
T  29653424 tactccctccattttaaaatgagtgtcgttttagc 29653458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 34972562 - 34972596
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||||||||||||||||| ||||||    
T  34972562 tactccctccgttttaaaatgagtgtcgctttagc 34972596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 42104263 - 42104229
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  42104263 tactccctccgtttcaaaatgagtgtcgttttagc 42104229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 42978264 - 42978230
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||| ||||||||||||||||||||||||||||||    
T  42978264 tacttcctccgttttaaaatgagtgtcgttttagc 42978230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 3306207 - 3306174
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    ||||||||||||||||||||||||||| ||||||    
T  3306207 tactccctccgttttaaaatgagtgtcattttag 3306174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4631160 - 4631127
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||| |||||||||||||||||||    
T  4631160 tactccctccgtttcaaaatgagtgtcgttttag 4631127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 10344855 - 10344888
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||| |||||||||||||||||||    
T  10344855 tactccctccgtttcaaaatgagtgtcgttttag 10344888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 34171392 - 34171363
Alignment:
Q  147 cctccgttttaaaatgagtgtcgttttagc 176  Q
    ||||||||||||||||||||||||||||||    
T  34171392 cctccgttttaaaatgagtgtcgttttagc 34171363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 38369827 - 38369860
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||||| |||||||||||    
T  38369827 tactccctccgttttaaaatgaatgtcgttttag 38369860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 39804248 - 39804215
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||||||||||||||||| |||||||||||||    
T  39804248 tactccctccgttttaaaataagtgtcgttttag 39804215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 2729985 - 2729953
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||| ||||||||||||||||||    
T  2729985 tactccctccgtttcaaaatgagtgtcgtttta 2729953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 4371591 - 4371559
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||||||||||| ||||||||||||||||||    
T  4371591 tactccctccgtttcaaaatgagtgtcgtttta 4371559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 9572 - 9606
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  9572 tactccctccgtttcaaaatgagtgtcgttttagc 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 70653 - 70619
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttagc 176  Q
    |||||||||||||| ||||||||||||||||||||    
T  70653 tactccctccgtttcaaaatgagtgtcgttttagc 70619  T

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Target: scaffold0332 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 3733 - 3766
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgttttag 175  Q
    |||||| |||||||||||||||||||||||||||    
T  3733 tactccttccgttttaaaatgagtgtcgttttag 3766  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Complemental strand, 21280 - 21248
Alignment:
Q  142 tactccctccgttttaaaatgagtgtcgtttta 174  Q
    |||||| ||||||||||||||||||||||||||    
T  21280 tactccatccgttttaaaatgagtgtcgtttta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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