View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11776_low_35 (Length: 239)
Name: NF11776_low_35
Description: NF11776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11776_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10595206 - 10594984
Alignment:
| Q |
1 |
aattcttcttggtcctatagatccaaatatcctatcatctttggcataaaaaactgcatttttt-ggttacaacaataaggcatgcatcaagcacatcat |
99 |
Q |
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| T |
10595206 |
aattcttcttggtcctatagatcctaatatcctatcatctttggcataaaaaactgcatttttttggttacaacaataaggcatacatcaagcacatcat |
10595107 |
T |
|
| Q |
100 |
ttcctccaattcaaacaatatgaagcaaacacatctgaggatcttttttattacataggcaaaacaatttggtaatttctctagagcttctcactattat |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
10595106 |
ttcctccaattcaaacaatatgaagcaaacacatctgaggatcttttttattacataggcaaaacaatttggtaatatctctagagcttctcactattat |
10595007 |
T |
|
| Q |
200 |
actacatcaaaatttacaaaattc |
223 |
Q |
| |
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||||||||||||||| |||||||| |
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| T |
10595006 |
actacatcaaaattt-caaaattc |
10594984 |
T |
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