View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11777_low_6 (Length: 253)
Name: NF11777_low_6
Description: NF11777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11777_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 53626610 - 53626368
Alignment:
| Q |
1 |
tgctagtgatgggggtttggcttttgttccaaacaatttcacagttaacgctggagacaccattacattcaagaacaatgctggttttcctcacaacgtt |
100 |
Q |
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| T |
53626610 |
tgctagtgatgggggtttggcttttgttccaaacaatttcacagtgaacgctggagacaccattacattcaagaacaatgctggttttcctcacaacgtt |
53626511 |
T |
|
| Q |
101 |
atcttcgatgaagacgagattccaagcggggttgatgcagcaaaaatttccatgcctgaagaagatcttctcaatgctcctggggagacttacagcgtta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53626510 |
atcttcgatgaagacgagattccaagcggggttgatgcagcaaaaatttccatgcctgaagaagatcttctcaatgctcctggggagacttacagcgtta |
53626411 |
T |
|
| Q |
201 |
ctttggatgctaagggaacctacaaattctactgttcatctca |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
53626410 |
ctttggatgctaagggaacctacaaattctactgttcacctca |
53626368 |
T |
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