View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11778_high_44 (Length: 254)

Name: NF11778_high_44
Description: NF11778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11778_high_44
NF11778_high_44
[»] chr4 (28 HSPs)
chr4 (1-190)||(54290481-54290670)
chr4 (195-254)||(14795020-14795079)
chr4 (198-254)||(8064171-8064227)
chr4 (194-254)||(19738693-19738753)
chr4 (195-254)||(5834827-5834886)
chr4 (195-254)||(28376993-28377052)
chr4 (195-254)||(52122931-52122990)
chr4 (195-253)||(47607107-47607165)
chr4 (195-252)||(41145609-41145666)
chr4 (198-254)||(38492321-38492377)
chr4 (196-253)||(51674856-51674913)
chr4 (198-254)||(1176981-1177037)
chr4 (197-253)||(3403638-3403694)
chr4 (194-254)||(42472631-42472691)
chr4 (208-254)||(52721274-52721320)
chr4 (200-249)||(51858834-51858883)
chr4 (196-253)||(53322335-53322392)
chr4 (198-254)||(2586336-2586392)
chr4 (198-254)||(5325783-5325839)
chr4 (198-254)||(55901201-55901257)
chr4 (198-247)||(17892248-17892297)
chr4 (198-254)||(40694070-40694126)
chr4 (198-254)||(44121904-44121960)
chr4 (195-246)||(10257697-10257748)
chr4 (207-254)||(27981905-27981952)
chr4 (197-254)||(31946267-31946324)
chr4 (198-251)||(36511999-36512052)
chr4 (198-254)||(52572210-52572266)
[»] chr8 (34 HSPs)
chr8 (195-254)||(12580615-12580674)
chr8 (195-254)||(6028484-6028543)
chr8 (195-254)||(34901444-34901503)
chr8 (195-254)||(36483432-36483491)
chr8 (196-254)||(2872972-2873030)
chr8 (192-254)||(4245934-4245996)
chr8 (193-254)||(16384612-16384673)
chr8 (195-254)||(13422205-13422264)
chr8 (195-254)||(28876628-28876687)
chr8 (195-254)||(32759370-32759429)
chr8 (195-254)||(32877434-32877493)
chr8 (195-254)||(43771766-43771825)
chr8 (196-254)||(25022123-25022181)
chr8 (195-253)||(37372256-37372314)
chr8 (195-254)||(22201399-22201458)
chr8 (196-254)||(19436272-19436330)
chr8 (196-254)||(19572421-19572479)
chr8 (198-254)||(32638918-32638974)
chr8 (195-254)||(37668579-37668638)
chr8 (196-254)||(40412433-40412491)
chr8 (205-254)||(32424928-32424977)
chr8 (203-254)||(5818373-5818424)
chr8 (200-254)||(19948058-19948112)
chr8 (195-254)||(5539433-5539490)
chr8 (198-253)||(23265649-23265704)
chr8 (195-254)||(45217282-45217341)
chr8 (196-254)||(27886188-27886246)
chr8 (196-254)||(27944846-27944904)
chr8 (195-252)||(29355620-29355677)
chr8 (198-254)||(12357889-12357944)
chr8 (198-254)||(12359017-12359072)
chr8 (198-254)||(27968103-27968159)
chr8 (198-254)||(28025089-28025145)
chr8 (194-254)||(38388663-38388723)
[»] chr3 (41 HSPs)
chr3 (193-254)||(40497325-40497386)
chr3 (195-254)||(7327709-7327768)
chr3 (196-254)||(35389748-35389806)
chr3 (195-254)||(22611436-22611495)
chr3 (195-254)||(37996873-37996932)
chr3 (195-253)||(52121177-52121235)
chr3 (197-254)||(19420904-19420961)
chr3 (197-254)||(52684200-52684257)
chr3 (195-252)||(55269076-55269133)
chr3 (198-254)||(48122825-48122881)
chr3 (194-253)||(28704723-28704782)
chr3 (195-250)||(30787628-30787683)
chr3 (196-254)||(19879155-19879213)
chr3 (196-254)||(22310703-22310761)
chr3 (196-254)||(29915859-29915917)
chr3 (196-254)||(29965012-29965070)
chr3 (196-254)||(42464969-42465027)
chr3 (193-254)||(2567449-2567510)
chr3 (197-254)||(28882740-28882797)
chr3 (198-254)||(6134444-6134500)
chr3 (198-254)||(22289783-22289839)
chr3 (198-254)||(47642017-47642073)
chr3 (198-254)||(53192498-53192554)
chr3 (195-254)||(1679760-1679819)
chr3 (195-254)||(10225213-10225272)
chr3 (191-254)||(25937126-25937188)
chr3 (198-254)||(13748509-13748565)
chr3 (195-234)||(33238720-33238759)
chr3 (195-254)||(52505895-52505953)
chr3 (196-254)||(42229672-42229730)
chr3 (206-251)||(13353251-13353296)
chr3 (196-252)||(21006549-21006605)
chr3 (196-254)||(2122702-2122763)
chr3 (198-253)||(19349653-19349708)
chr3 (199-254)||(28968511-28968566)
chr3 (195-254)||(41742134-41742193)
chr3 (198-252)||(1528502-1528556)
chr3 (194-236)||(38889159-38889201)
chr3 (198-254)||(7899781-7899837)
chr3 (198-254)||(30226420-30226476)
chr3 (208-252)||(49419245-49419289)
[»] chr2 (30 HSPs)
chr2 (194-254)||(7876710-7876770)
chr2 (195-254)||(38602384-38602443)
chr2 (195-254)||(40308959-40309018)
chr2 (195-254)||(4170564-4170623)
chr2 (195-254)||(33324815-33324874)
chr2 (196-254)||(6497711-6497769)
chr2 (194-254)||(20536771-20536831)
chr2 (198-254)||(22570937-22570993)
chr2 (195-254)||(16561797-16561856)
chr2 (195-254)||(28746714-28746773)
chr2 (196-254)||(14824146-14824204)
chr2 (200-253)||(37134361-37134414)
chr2 (195-247)||(7807443-7807495)
chr2 (198-254)||(35342317-35342373)
chr2 (198-252)||(22484267-22484321)
chr2 (196-254)||(45159360-45159418)
chr2 (197-254)||(1005512-1005569)
chr2 (197-254)||(2319274-2319331)
chr2 (195-251)||(12819298-12819354)
chr2 (198-254)||(24585530-24585585)
chr2 (195-254)||(1776498-1776557)
chr2 (195-254)||(6124170-6124229)
chr2 (195-254)||(18300969-18301028)
chr2 (195-254)||(31236248-31236307)
chr2 (198-254)||(4355325-4355381)
chr2 (198-254)||(14217216-14217272)
chr2 (194-236)||(5588103-5588145)
chr2 (198-252)||(44156597-44156651)
chr2 (194-254)||(4561784-4561844)
chr2 (198-254)||(25933565-25933621)
[»] scaffold0005 (1 HSPs)
scaffold0005 (195-254)||(44652-44711)
[»] chr7 (36 HSPs)
chr7 (195-254)||(39520794-39520853)
chr7 (195-254)||(40095644-40095703)
chr7 (196-254)||(11829684-11829742)
chr7 (196-254)||(42896997-42897055)
chr7 (193-254)||(34238150-34238211)
chr7 (195-254)||(25969391-25969450)
chr7 (195-254)||(27353915-27353974)
chr7 (195-254)||(48163402-48163461)
chr7 (203-254)||(36202840-36202891)
chr7 (198-252)||(1043135-1043189)
chr7 (196-254)||(4291507-4291565)
chr7 (198-251)||(16564423-16564476)
chr7 (198-251)||(16601186-16601239)
chr7 (196-253)||(33454065-33454122)
chr7 (195-252)||(38262993-38263050)
chr7 (196-253)||(44960198-44960255)
chr7 (195-254)||(554942-555001)
chr7 (195-254)||(11058346-11058405)
chr7 (195-254)||(26773774-26773833)
chr7 (196-250)||(23079106-23079160)
chr7 (206-254)||(26845958-26846006)
chr7 (198-254)||(34122679-34122735)
chr7 (195-254)||(16850780-16850839)
chr7 (198-253)||(27398110-27398165)
chr7 (195-246)||(47238677-47238728)
chr7 (196-254)||(27555431-27555489)
chr7 (209-254)||(9250484-9250529)
chr7 (196-253)||(19510518-19510575)
chr7 (196-253)||(38064590-38064647)
chr7 (198-249)||(15878411-15878462)
chr7 (195-253)||(21409385-21409443)
chr7 (198-254)||(35136056-35136112)
chr7 (198-254)||(35159862-35159918)
chr7 (198-254)||(36758058-36758114)
chr7 (198-254)||(36767582-36767638)
chr7 (198-250)||(40041376-40041428)
[»] chr6 (15 HSPs)
chr6 (195-254)||(1036888-1036947)
chr6 (195-254)||(26327152-26327211)
chr6 (195-254)||(27083982-27084041)
chr6 (198-254)||(234306-234362)
chr6 (196-253)||(32130722-32130779)
chr6 (198-254)||(8356958-8357014)
chr6 (196-254)||(3299139-3299197)
chr6 (195-254)||(3212474-3212533)
chr6 (195-254)||(10894635-10894693)
chr6 (207-254)||(32017986-32018033)
chr6 (198-254)||(7188841-7188894)
chr6 (208-254)||(31195931-31195977)
chr6 (196-253)||(25834559-25834616)
chr6 (198-254)||(31079612-31079668)
chr6 (198-252)||(29892966-29893020)
[»] chr5 (27 HSPs)
chr5 (195-254)||(12852116-12852175)
chr5 (195-254)||(32707893-32707952)
chr5 (195-254)||(39690825-39690884)
chr5 (198-254)||(33829753-33829809)
chr5 (195-254)||(1639844-1639903)
chr5 (198-254)||(30284669-30284725)
chr5 (195-254)||(10656817-10656876)
chr5 (195-254)||(30777584-30777643)
chr5 (200-254)||(26691618-26691672)
chr5 (200-254)||(26961350-26961404)
chr5 (196-254)||(30918376-30918434)
chr5 (195-252)||(9792316-9792373)
chr5 (198-254)||(41392774-41392830)
chr5 (199-254)||(17138316-17138370)
chr5 (195-254)||(26716270-26716329)
chr5 (195-254)||(26795055-26795114)
chr5 (195-254)||(26986010-26986069)
chr5 (196-254)||(1795390-1795448)
chr5 (193-254)||(6243220-6243281)
chr5 (196-252)||(32624875-32624931)
chr5 (196-252)||(35746315-35746371)
chr5 (199-253)||(42366166-42366220)
chr5 (193-252)||(32728773-32728832)
chr5 (195-253)||(5721985-5722042)
chr5 (200-254)||(11906220-11906274)
chr5 (205-254)||(27938170-27938219)
chr5 (207-252)||(41233388-41233433)
[»] chr1 (34 HSPs)
chr1 (195-254)||(6916936-6916995)
chr1 (195-254)||(8132180-8132239)
chr1 (195-254)||(28949303-28949362)
chr1 (195-254)||(37346910-37346969)
chr1 (195-254)||(38330424-38330483)
chr1 (195-254)||(52895775-52895834)
chr1 (198-254)||(20409616-20409672)
chr1 (195-254)||(1043224-1043283)
chr1 (193-254)||(2472916-2472977)
chr1 (198-254)||(37104120-37104176)
chr1 (195-254)||(1036456-1036515)
chr1 (195-254)||(38948729-38948788)
chr1 (195-254)||(43189652-43189711)
chr1 (196-246)||(24849362-24849412)
chr1 (193-254)||(9781637-9781698)
chr1 (195-254)||(3426845-3426904)
chr1 (199-254)||(5984228-5984283)
chr1 (195-254)||(36367754-36367813)
chr1 (200-254)||(41676051-41676105)
chr1 (193-253)||(34432446-34432506)
chr1 (195-254)||(34096614-34096673)
chr1 (194-252)||(2364673-2364731)
chr1 (196-254)||(14167082-14167140)
chr1 (196-254)||(29861799-29861857)
chr1 (198-254)||(10822402-10822458)
chr1 (199-247)||(36551492-36551540)
chr1 (195-254)||(29167944-29168003)
chr1 (204-247)||(38218404-38218447)
chr1 (196-254)||(3708341-3708399)
chr1 (198-252)||(8829773-8829826)
chr1 (195-253)||(13013055-13013113)
chr1 (195-237)||(14334169-14334210)
chr1 (200-254)||(40775997-40776051)
chr1 (196-254)||(48715287-48715345)
[»] scaffold0640 (1 HSPs)
scaffold0640 (195-254)||(8154-8213)
[»] scaffold0037 (1 HSPs)
scaffold0037 (195-254)||(27843-27902)
[»] scaffold0112 (1 HSPs)
scaffold0112 (198-254)||(42127-42183)
[»] scaffold0250 (1 HSPs)
scaffold0250 (195-254)||(5509-5568)
[»] scaffold0177 (1 HSPs)
scaffold0177 (195-254)||(25592-25651)
[»] scaffold0060 (1 HSPs)
scaffold0060 (195-254)||(30506-30565)
[»] scaffold0285 (1 HSPs)
scaffold0285 (200-254)||(13252-13306)
[»] scaffold0406 (1 HSPs)
scaffold0406 (194-253)||(13862-13921)


Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 54290670 - 54290481
Alignment:
Q  1 ggttcagccaagtttaagagtagagatggttggtcaagatgagagttaaatttagatacgaaattgtagcagaacaagttgatgaaatgatggttttgaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54290670 ggttcagccaagtataagagtagagatggttggtcaagatgagagttaaatttagatacgaaattgtagcagaacatgttgatgaaatgatggttttgaa 54290571  T
Q  101 aaaataatttagtttgtttatgtagaagatttgttaacacgcacaatattttttagagagtatgcacataacaaattaatctttcattcc 190  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54290570 aaaataatttagtttgtttatgcagaagatttgttaacacgcacaatattttttagagagtatgcacataacaaattaagctttcattcc 54290481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 14795020 - 14795079
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  14795020 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 14795079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 8064227 - 8064171
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 8064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 19738693 - 19738753
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  19738693 actgggaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 19738753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5834827 - 5834886
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  5834827 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 5834886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 28376993 - 28377052
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  28376993 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcacc 28377052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 52122990 - 52122931
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  52122990 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 52122931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 47607107 - 47607165
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  47607107 ctgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgcac 47607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 41145609 - 41145666
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  41145609 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgca 41145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 38492377 - 38492321
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  38492377 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 38492321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 51674856 - 51674913
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  51674856 tgtgaagcgccgatacttcaaaatagatgacgtatcgtatctcctgcatattctgcac 51674913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 1176981 - 1177037
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||    
T  1176981 tgaagccccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgcacc 1177037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 3403694 - 3403638
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcac 3403638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 42472691 - 42472631
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| |||||||||||||||| |||||||||| ||||  |||||||||||||||||    
T  42472691 actgtgaagtcccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcacc 42472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 52721274 - 52721320
Alignment:
Q  208 atacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  52721274 atacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcacc 52721320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 51858834 - 51858883
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcct 249  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  51858834 aagccccgatactttaaaatggatgacgtatcgtatctcctgcgtatcct 51858883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 53322335 - 53322392
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||||||||||||||| ||||||||| ||||||   ||||||||||||||    
T  53322335 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcac 53322392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 2586336 - 2586392
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||| ||||| |||||||||||||||| |||| ||||||| ||||    
T  2586336 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgagtatccttcacc 2586392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 5325839 - 5325783
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||| ||||| |||||||||  ||||| |||||||||||||||||    
T  5325839 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcacc 5325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 55901257 - 55901201
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||| ||||||||||| ||||||||||||||| |||||| |||| ||||||||||||    
T  55901257 tgaaaccccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcacc 55901201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 17892248 - 17892297
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatc 247  Q
    |||||| ||||||||||||||| || ||||||||||||||| ||||||||    
T  17892248 tgaagctccgatacttcaaaatggacgacgtaccgtatctcatgcgtatc 17892297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 40694070 - 40694126
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| ||||| ||| |||||| | ||||||| |||||||    
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcacc 40694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 44121960 - 44121904
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||  |||||||||||| || |||||| ||||||| ||||||||||||||||    
T  44121960 tgaagcccacatacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcacc 44121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 10257697 - 10257748
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtat 246  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||  ||||||||    
T  10257697 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatccgctgcgtat 10257748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 27981905 - 27981952
Alignment:
Q  207 gatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  27981905 gatacttcaaaatggatgacgtatcgtatctcctgcgcatcctccacc 27981952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 31946324 - 31946267
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||  |||||||| ||||| ||||||||| |||||  |||||||||||||||||    
T  31946324 gtgaagcttcgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcacc 31946267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 36512052 - 36511999
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgc 251  Q
    |||||||||||||||||||||| | |||||||  ||||| | ||||||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgc 36511999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 52572210 - 52572266
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||| ||||| |||||||| ||||||| |||| | ||| ||||||    
T  52572210 tgaagccccgatactttaaaatggatgacgttccgtatcccctgtgcatcatgcacc 52572266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 12580674 - 12580615
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12580674 ctgtgaagccccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcacc 12580615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 6028484 - 6028543
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6028484 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 6028543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 34901503 - 34901444
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34901503 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 34901444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 36483432 - 36483491
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  36483432 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 36483491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 2873030 - 2872972
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  2873030 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 2872972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 4245934 - 4245996
Alignment:
Q  192 caactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  4245934 caactgtgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcacc 4245996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 16384612 - 16384673
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  16384612 aactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcacc 16384673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 13422205 - 13422264
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  13422205 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcacc 13422264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 28876687 - 28876628
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  28876687 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 28876628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 32759370 - 32759429
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  32759370 ctgtgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 32759429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 32877434 - 32877493
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  32877434 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 32877493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 43771825 - 43771766
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  43771825 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 43771766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 25022123 - 25022181
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  25022123 tgtgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcacc 25022181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 37372256 - 37372314
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  37372256 ctgtgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcac 37372314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 22201458 - 22201399
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  22201458 ctgtgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 22201399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 19436272 - 19436330
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcacc 19436330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 19572421 - 19572479
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcacc 19572479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 32638974 - 32638918
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  32638974 tgaagctctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 32638918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 37668579 - 37668638
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| ||||||||||||||||| |||||||||||||||  |||||||||| ||||||    
T  37668579 ctgtgaaaccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgcacc 37668638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 40412433 - 40412491
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| |||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  40412433 tgtgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcacc 40412491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 32424928 - 32424977
Alignment:
Q  205 ccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcacc 32424977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 5818424 - 5818373
Alignment:
Q  203 ccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||| ||||||||| |||||| | |||||||||||||||    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcacc 5818373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 19948112 - 19948058
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||| ||||||||| | |||| |||||||||||||||||    
T  19948112 aagccctgatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcacc 19948058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5539433 - 5539490
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||||||    
T  5539433 ctgtgaagccc-gatacttcaaaatggatgatgtactgtatc-cctgcgtatcctgcacc 5539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 23265649 - 23265704
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||  |||||| |||||||| ||| ||||||||||||||||||| ||||||    
T  23265649 tgaagcccaaatactttaaaatagacgacataccgtatctcctgcgtattctgcac 23265704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 45217341 - 45217282
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| |||||  ||  ||||| |||||||||||||||||    
T  45217341 ctgtgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcacc 45217282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 27886188 - 27886246
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||| |||||||||  ||||  ||||| |||||||||||    
T  27886188 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcacc 27886246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 27944846 - 27944904
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||| |||||||||  ||||  ||||| |||||||||||    
T  27944846 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcacc 27944904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 29355620 - 29355677
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||| ||||||||||||| |||||| || | |||| |||| ||||||||||    
T  29355620 ctgtgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgca 29355677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 12357889 - 12357944
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||| ||||||||| ||||||  ||| ||||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtgtatcctgcacc 12357944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 12359017 - 12359072
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||| ||||||||| ||||||  ||| ||||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtgtatcctgcacc 12359072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 27968103 - 27968159
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| |||||||||| |||||||||||||||  ||||  ||||| |||||||||||    
T  27968103 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcacc 27968159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 28025089 - 28025145
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| |||||||||| |||||||||||||||  ||||  ||||| |||||||||||    
T  28025089 tgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcacc 28025145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 38388663 - 38388723
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||||||| ||||  |||  |||||  ||||||||||||||||    
T  38388663 actgtgaaaccccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcacc 38388723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 40497325 - 40497386
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40497325 aactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 40497386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 7327709 - 7327768
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7327709 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 7327768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 35389748 - 35389806
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  35389748 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 35389806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 22611495 - 22611436
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  22611495 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcacc 22611436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 37996932 - 37996873
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  37996932 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 37996873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 52121177 - 52121235
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  52121177 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcac 52121235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 19420904 - 19420961
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 52684200 - 52684257
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  52684200 gtgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcacc 52684257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 55269133 - 55269076
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  55269133 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 55269076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 48122825 - 48122881
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  48122825 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcacc 48122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 28704723 - 28704782
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||    
T  28704723 actgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcac 28704782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 30787683 - 30787628
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctg 250  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||    
T  30787683 ctgtgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctg 30787628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 19879213 - 19879155
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||    
T  19879213 tgtgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 19879155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 22310703 - 22310761
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||    
T  22310703 tgtgaagccccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcacc 22310761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 29915859 - 29915917
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  29915859 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcacc 29915917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 29965012 - 29965070
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  29965012 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcacc 29965070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 42465027 - 42464969
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||    
T  42465027 tgtgaagccccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcacc 42464969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 2567510 - 2567449
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||  |||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  2567510 aactgtgaaatcccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcacc 2567449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 28882797 - 28882740
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcacc 28882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 6134500 - 6134444
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 6134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 22289839 - 22289783
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 22289783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 47642017 - 47642073
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||    
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcacc 47642073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 53192498 - 53192554
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||    
T  53192498 tgaagccccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcacc 53192554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 1679819 - 1679760
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||| ||||||||||||  |||| |||||||||||    
T  1679819 ctgtgaagccccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcacc 1679760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 10225272 - 10225213
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  10225272 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 10225213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 25937188 - 25937126
Alignment:
Q  191 gcaactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||    
T  25937188 gcaactgtgaagccc-gatactttaaaatggatgacgtatcgtatctcctgcgtatcctacacc 25937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 13748565 - 13748509
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| | ||||||| ||||||  ||||||||||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcacc 13748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 33238720 - 33238759
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgta 234  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  33238720 ctgtgaagccccgatacttcaaaatggatgacgtaccgta 33238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 52505953 - 52505895
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| ||||| |||| ||||| |||||||||||||||||    
T  52505953 ctgtgaagccccgatacttaaaaatggatgatgtactgtatc-cctgcgtatcctgcacc 52505895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 42229672 - 42229730
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| || ||||||||||||||||||||||   |||| |||||||||||||||||    
T  42229672 tgtgaagctccaatacttcaaaatagatgacgtattatatcccctgcgtatcctgcacc 42229730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 13353296 - 13353251
Alignment:
Q  206 cgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgc 251  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgc 13353251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 21006605 - 21006549
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||||||||||||  |||||||| | |||||| |||||||| ||||    
T  21006605 tgtgaagccccgatacttcaaaatgaatgacgtatcatatctcatgcgtatcttgca 21006549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 2122702 - 2122763
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtat---ctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||  ||||   |||||||||||| ||||||    
T  2122702 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcacc 2122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 19349708 - 19349653
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||| ||| |||||||    
T  19349708 tgaagctccgatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcac 19349653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 28968511 - 28968566
Alignment:
Q  199 gaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||| ||||||||||| ||||   | |||||||||||||    
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcacc 28968566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 41742193 - 41742134
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||||||||| |||||||||  |||||  ||| ||||||||||||    
T  41742193 ctgtgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcacc 41742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 1528502 - 1528556
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||| ||||||||||||||| ||||||||| | |||| |||||||||| ||||    
T  1528502 tgaagctccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgca 1528556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 38889201 - 38889159
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatc 236  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||    
T  38889201 actgtgaagccctgatacttcaaaatggatgacgtatcgtatc 38889159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 7899837 - 7899781
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||| ||||||| |  ||||||| | |||||||||||||    
T  7899837 tgaagcctcgatacttcaaaatggatgacgaaatgtatctcttacgtatcctgcacc 7899781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 30226420 - 30226476
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||  |||||||||||| |||||| || ||||||  ||||||||||||||||    
T  30226420 tgaagcccatatacttcaaaatggatgacttatcgtatcctctgcgtatcctgcacc 30226476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 49419245 - 49419289
Alignment:
Q  208 atacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||||||| ||||||||| |||||| | |||||||||||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgca 49419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 7876710 - 7876770
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7876710 actgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 7876770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 38602443 - 38602384
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  38602443 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 38602384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 40309018 - 40308959
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  40309018 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcacc 40308959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 4170623 - 4170564
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  4170623 ctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 4170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 33324815 - 33324874
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  33324815 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcacc 33324874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 6497769 - 6497711
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6497769 tgtgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 6497711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 20536771 - 20536831
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||||||    
T  20536771 actgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcacc 20536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 22570937 - 22570993
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcacc 22570993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 16561797 - 16561856
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  16561797 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcacc 16561856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 28746773 - 28746714
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| | ||||||| |||||| |||||||||||||||||    
T  28746773 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcacc 28746714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 14824146 - 14824204
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcacc 14824204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 37134414 - 37134361
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  37134414 aagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcac 37134361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 7807495 - 7807443
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatc 247  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  7807495 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatc 7807443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 35342317 - 35342373
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  35342317 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcacc 35342373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 22484267 - 22484321
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||||||||    
T  22484267 tgaagccccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgca 22484321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 45159418 - 45159360
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| ||||||||| |||||| | |||||||| ||||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcacc 45159360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 1005512 - 1005569
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| | ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  1005512 gtgaagctctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 1005569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 2319274 - 2319331
Alignment:
Q  197 gtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcacc 2319331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 12819298 - 12819354
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgc 251  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| |||| |||||||||    
T  12819298 ctgtgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtgtatcctgc 12819354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 24585530 - 24585585
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtatc-cctgcgtatcctgcacc 24585585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 1776557 - 1776498
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| | ||||||| |||||| | ||||||| |||||||    
T  1776557 ctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcacc 1776498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 6124170 - 6124229
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| |||||||||  ||||| |||| ||||||||||||    
T  6124170 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcacc 6124229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 18300969 - 18301028
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| |||| |||| |||||||    
T  18300969 ctgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcacc 18301028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 31236307 - 31236248
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| ||| |||||  ||||| |||||||||||||||||    
T  31236307 ctgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacc 31236248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 4355325 - 4355381
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||| ||||||||| |||||  ||||||||| |||||||    
T  4355325 tgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcacc 4355381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 14217272 - 14217216
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||||| |||||||||  ||||| ||||||||| |||||||    
T  14217272 tgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcacc 14217216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 5588103 - 5588145
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatc 236  Q
    |||||||||| ||||||||||||||| ||||||||| ||||||    
T  5588103 actgtgaagctccgatacttcaaaatggatgacgtatcgtatc 5588145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 44156597 - 44156651
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||| ||||||||||||||||| |||||| || |||||| |||||||||| ||||    
T  44156597 tgaatccccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgca 44156651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 4561784 - 4561844
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| || |||||||||||| ||||||||| |||||  | || ||||||||||||    
T  4561784 actgtgaagctccaatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcacc 4561844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 25933565 - 25933621
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||  |||||||||||| ||||| ||| |||||| |||||||||| ||||||    
T  25933565 tgaagcccatatacttcaaaatggatgatgtatcgtatcccctgcgtatcatgcacc 25933621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 44711 - 44652
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  44711 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 44652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 39520794 - 39520853
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  39520794 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 39520853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 40095644 - 40095703
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40095644 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 40095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 11829684 - 11829742
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  11829684 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 11829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 42896997 - 42897055
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  42896997 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 42897055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 34238150 - 34238211
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34238150 aactgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcacc 34238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 25969391 - 25969450
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  25969391 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 25969450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 27353915 - 27353974
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  27353915 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcacc 27353974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 48163402 - 48163461
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  48163402 ctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcacc 48163461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 36202891 - 36202840
Alignment:
Q  203 ccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  36202891 ccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 36202840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 1043189 - 1043135
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgca 1043135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 4291507 - 4291565
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||    
T  4291507 tgtgaagccccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcacc 4291565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 16564476 - 16564423
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgc 251  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  16564476 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc 16564423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 16601186 - 16601239
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgc 251  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  16601186 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc 16601239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 33454065 - 33454122
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcac 33454122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 38262993 - 38263050
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||    
T  38262993 ctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgca 38263050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 44960255 - 44960198
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  44960255 tgtgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcac 44960198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 555001 - 554942
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||  ||||||||||||||| |||||| |||| ||||||||||||    
T  555001 ctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcacc 554942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 11058346 - 11058405
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| || | ||||||||||| |||||||||||||||| |||||||||||||||||    
T  11058346 ctgtgaagtccaggtacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 11058405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 26773833 - 26773774
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| ||||||||| |||||| | |||||||||||||||    
T  26773833 ctgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcacc 26773774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 23079160 - 23079106
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctg 250  Q
    |||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  23079160 tgtgtagccccgatacttcaaaatggatgacataccgtatcccctgcgtatcctg 23079106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 26846006 - 26845958
Alignment:
Q  206 cgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  26846006 cgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcacc 26845958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 34122735 - 34122679
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||  ||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  34122735 tgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcacc 34122679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 16850780 - 16850839
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||| |||||||| |||||||||||||||  |||| ||||| ||||||    
T  16850780 ctgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcacc 16850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 27398165 - 27398110
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||| ||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcac 27398110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 47238728 - 47238677
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtat 246  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| |||||||||    
T  47238728 ctgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtat 47238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 27555489 - 27555431
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| ||||||||||||| |||||||||||||||   |||||||| |||||||    
T  27555489 tgtgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcacc 27555431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 9250529 - 9250484
Alignment:
Q  209 tacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 9250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 19510518 - 19510575
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||| ||||||||||||||||| ||||||||| |||||| |||| ||||| |||||    
T  19510518 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcac 19510575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 38064590 - 38064647
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||||||||| ||||| |||||| || |||||||| |||||||| |||||    
T  38064590 tgtgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcac 38064647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 15878462 - 15878411
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcct 249  Q
    |||||||||||||||||||||  ||||| |||||||||| ||| ||||||||    
T  15878462 tgaagccccgatacttcaaaacggatgatgtaccgtatcccctacgtatcct 15878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 21409385 - 21409443
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||  |||||| ||||| ||||||||| |||||||||||  ||||||||||    
T  21409385 ctgtgaagccctcatacttaaaaatggatgacgtatcgtatctcctgtatatcctgcac 21409443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 35136056 - 35136112
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| | ||||||||||||| | ||||||||||||| ||||| ||||| ||||||    
T  35136056 tgaagctcggatacttcaaaatgggtgacgtaccgtatttcctgggtatcttgcacc 35136112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 35159862 - 35159918
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||||| ||||| ||| |||||| ||||| ||| |||||||    
T  35159862 tgaagctccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcacc 35159918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 36758114 - 36758058
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||||||  |||| ||| |||||| ||||||||| |||||||    
T  36758114 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcacc 36758058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 36767638 - 36767582
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||||||  |||| ||| |||||| ||||||||| |||||||    
T  36767638 tgaagccccaatacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcacc 36767582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 40041376 - 40041428
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctg 250  Q
    |||||| | |||| |||||||||||||| ||| |||||||||| |||||||||    
T  40041376 tgaagctctgatatttcaaaatagatgatgtatcgtatctcctacgtatcctg 40041428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 1036947 - 1036888
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  1036947 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 1036888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 26327152 - 26327211
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  26327152 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcacc 26327211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 27083982 - 27084041
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  27083982 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 27084041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 234306 - 234362
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcacc 234362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 32130779 - 32130722
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||    
T  32130779 tgtgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcac 32130722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 8356958 - 8357014
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  8356958 tgaagtcctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 8357014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 3299139 - 3299197
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| ||||||||||||||||||| ||||||||||  |||| |||||||||||    
T  3299139 tgtgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcacc 3299197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 3212474 - 3212533
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| |||||  | || ||||||||||||    
T  3212474 ctgtgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcacc 3212533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 10894693 - 10894635
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  10894693 ctgtgaagccctgatacttcaaaatggatgacgtaccgtatc-cccgcgtatcatgcacc 10894635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 32017986 - 32018033
Alignment:
Q  207 gatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 32018033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 7188894 - 7188841
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| ||||   ||||||||| |||||||||||||||||    
T  7188894 tgaagccccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcacc 7188841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 31195977 - 31195931
Alignment:
Q  208 atacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 31195931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 25834616 - 25834559
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||| ||||||||||||||| | ||||||||| |||||| | ||||||||||||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcac 25834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 31079612 - 31079668
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||| ||||| |||||||||  ||||| |||||||||||||||||    
T  31079612 tgaagctccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcacc 31079668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 29892966 - 29893020
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||| ||||||| ||||| ||||| |||| ||||| |||||||||||||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgca 29893020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 12852116 - 12852175
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  12852116 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 12852175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 32707952 - 32707893
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  32707952 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 32707893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 39690884 - 39690825
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  39690884 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 39690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 33829753 - 33829809
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  33829753 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 33829809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 1639903 - 1639844
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  1639903 ctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 1639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 30284725 - 30284669
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  30284725 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 30284669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 10656817 - 10656876
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  10656817 ctgtgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 10656876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 30777643 - 30777584
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||    
T  30777643 ctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcacc 30777584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 26691618 - 26691672
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcacc 26691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 26961350 - 26961404
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcacc 26961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 30918376 - 30918434
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcacc 30918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 9792316 - 9792373
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  9792316 ctgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgca 9792373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 41392830 - 41392774
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41392830 tgaagtccagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 41392774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 17138370 - 17138316
Alignment:
Q  199 gaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  17138370 gaagccccgatacttcaaaatagatgacgta-tgtatcccctgcgtatcctgcacc 17138316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 26716270 - 26716329
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| |||||||||||||| ||||||||| |||||| |||||||||||| ||||    
T  26716270 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacacc 26716329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 26795114 - 26795055
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||| ||||| ||||||||| |||||| |||||||||||||||||    
T  26795114 ctgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 26795055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 26986010 - 26986069
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||| |||||||||||||| ||||||||| |||||| |||||||||||| ||||    
T  26986010 ctgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacacc 26986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 1795390 - 1795448
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| | ||||||| |||||| ||| |||||||||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcacc 1795448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 6243281 - 6243220
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||||||||| |||||||||  |||||  ||||||||||||||||    
T  6243281 aactgtgaagctccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcacc 6243220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 32624875 - 32624931
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||| ||||| ||||    
T  32624875 tgtgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgca 32624931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 35746371 - 35746315
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||| |||||||||||||||||||||||||  ||||||||| |||||| ||||    
T  35746371 tgtgaagctccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgca 35746315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 42366220 - 42366166
Alignment:
Q  199 gaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||| || |||||||||||||||||| |||| ||||| ||||||||||||||||    
T  42366220 gaagctccaatacttcaaaatagatgatgtactgtatcccctgcgtatcctgcac 42366166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 32728832 - 32728773
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||| ||||||||||||||| ||||| |||  ||||| |||||||||| ||||    
T  32728832 aactgtgaagctccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgca 32728773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 5721985 - 5722042
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||||| |||| || ||||| ||||||||| |||||| ||||||||||||||||    
T  5721985 ctgtgaagccc-gatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcac 5722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 11906220 - 11906274
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||| |||||||||||||| |||||||||  ||||  |||||||||||||||||    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcacc 11906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 27938170 - 27938219
Alignment:
Q  205 ccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||| |||||||||  ||||||| |||||||| ||||||    
T  27938170 ccgatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcacc 27938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 41233388 - 41233433
Alignment:
Q  207 gatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||||||| ||||||||| ||||| |||| |||||||||||    
T  41233388 gatacttcaaaatggatgacgtatcgtatttcctacgtatcctgca 41233433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 6916995 - 6916936
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6916995 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 6916936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 8132180 - 8132239
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8132180 ctgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcacc 8132239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 28949362 - 28949303
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  28949362 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 28949303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 37346969 - 37346910
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  37346969 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 37346910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 38330424 - 38330483
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  38330424 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 38330483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 52895834 - 52895775
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  52895834 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 52895775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 20409672 - 20409616
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 20409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 1043224 - 1043283
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  1043224 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcacc 1043283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 2472977 - 2472916
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  2472977 aactgtgaagctccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgcacc 2472916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 37104120 - 37104176
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 37104176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 1036456 - 1036515
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||    
T  1036456 ctgtgaagccctcatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 1036515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 38948729 - 38948788
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  38948729 ctgtgaagctccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcacc 38948788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 43189652 - 43189711
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  43189652 ctgtgaagacccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcacc 43189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 24849362 - 24849412
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtat 246  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  24849362 tgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 9781637 - 9781698
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||| ||||||||||||| | ||||||| |||||| |||||||||||||||||    
T  9781637 aactgtgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcacc 9781698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 3426845 - 3426904
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||| ||||| |||||||||  ||||| |||||||||||||||||    
T  3426845 ctgtgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcacc 3426904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 5984228 - 5984283
Alignment:
Q  199 gaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  5984228 gaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcacc 5984283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 36367813 - 36367754
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||| || ||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  36367813 ctgtgaagtcctgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 36367754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 41676105 - 41676051
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||    
T  41676105 aagccccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcacc 41676051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 34432506 - 34432446
Alignment:
Q  193 aactgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||||| ||||||||||||||| |||||||||  ||||| |||||||||| |||||    
T  34432506 aactgtgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcac 34432446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 34096673 - 34096614
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||| ||||||||   ||||||| |||||| |||||||||||||||||    
T  34096673 ctgtgaagccccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcacc 34096614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 2364673 - 2364731
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    |||||||| ||| ||||||||||||| ||| ||||||| |||| |||||||||||||||    
T  2364673 actgtgaaacccagatacttcaaaatggataacgtaccatatcccctgcgtatcctgca 2364731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 14167082 - 14167140
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| | |||||||||||||| |||||| || |||||| |||||||||||||||||    
T  14167082 tgtgaagtctcgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcacc 14167140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 29861799 - 29861857
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||||| | |||||||  ||||||||| |||||| ||||||    
T  29861799 tgtgaagccccgatacttcaaaatggttgacgtattgtatctcctacgtatcatgcacc 29861857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 10822402 - 10822458
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||| |||||||||||||| ||||||||| | |||  |||||||||||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcacc 10822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 36551492 - 36551540
Alignment:
Q  199 gaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatc 247  Q
    ||||||||||||||||||||| |||||||||| || || ||||||||||    
T  36551492 gaagccccgatacttcaaaattgatgacgtactgtctcccctgcgtatc 36551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 29167944 - 29168003
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||| ||||| | |||||||||||| ||||||||| | |||| |||||||||||||||||    
T  29167944 ctgtaaagcctccatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcacc 29168003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 38218404 - 38218447
Alignment:
Q  204 cccgatacttcaaaatagatgacgtaccgtatctcctgcgtatc 247  Q
    |||||||||||||||| |||||||||||||||| | ||||||||    
T  38218404 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtatc 38218447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 3708399 - 3708341
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||||||| ||||||||| ||||||  |||| |||||| ||||    
T  3708399 tgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacacc 3708341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 8829826 - 8829773
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgca 252  Q
    ||||||||  ||||||||||||||| || ||||||||| ||||||||||||||||    
T  8829826 tgaagcccaaatacttcaaaatagacgaagtaccgtat-tcctgcgtatcctgca 8829773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 13013113 - 13013055
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    |||||||||||| |||||||||||| |||||| || |||||| |||| ||||| |||||    
T  13013113 ctgtgaagccccaatacttcaaaatggatgacatatcgtatcccctgtgtatcatgcac 13013055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 14334169 - 14334210
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatct 237  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  14334169 ctgtgaagccc-gatacttcaaaatggatgacgtaccgtatct 14334210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 40775997 - 40776051
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||| || ||||||  ||||| |||||||||||||||||    
T  40775997 aagcccagatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgcacc 40776051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 48715345 - 48715287
Alignment:
Q  196 tgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||| ||||||||||||||||| |||   ||| ||||||||||||||||||| ||||    
T  48715345 tgtgaaaccccgatacttcaaaatggatattgtatcgtatctcctgcgtatcctacacc 48715287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 8213 - 8154
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  8213 ctgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcacc 8154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 27902 - 27843
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  27902 ctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcacc 27843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 42183 - 42127
Alignment:
Q  198 tgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcacc 42127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 5509 - 5568
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  5509 ctgtaaagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcacc 5568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 25651 - 25592
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||    
T  25651 ctgtgaagccccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcacc 25592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 30565 - 30506
Alignment:
Q  195 ctgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||    
T  30565 ctgtgaagccccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacacc 30506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 13252 - 13306
Alignment:
Q  200 aagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcacc 254  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcacc 13306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 13862 - 13921
Alignment:
Q  194 actgtgaagccccgatacttcaaaatagatgacgtaccgtatctcctgcgtatcctgcac 253  Q
    ||||||||| |||||||||||||||| |||||||||| |||||  |||||||||||||||    
T  13862 actgtgaagtcccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcac 13921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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