View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11778_high_51 (Length: 240)
Name: NF11778_high_51
Description: NF11778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11778_high_51 |
 | |
|
| [»] scaffold0737 (1 HSPs) |
| | |
|
| [»] scaffold0166 (1 HSPs) |
| | |
|
| [»] scaffold1269 (1 HSPs) |
| | |
|
| [»] scaffold0319 (1 HSPs) |
| | |
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| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0091 (1 HSPs) |
| | |
|
| [»] scaffold0218 (1 HSPs) |
| | |
|
| [»] scaffold0385 (1 HSPs) |
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| [»] scaffold0145 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0094 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 29294173 - 29293948
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29294173 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctagaatagatgagaaaatagagtatgcccataaaatga |
29294074 |
T |
|
| Q |
117 |
ataataaaataaactagagg---gatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtga--taaacggttgatat |
211 |
Q |
| |
|
||||||||||||| || ||| |||||||||| | ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
29294073 |
ataataaaataaaataaagggtcgatgttgatgtataaatgagtcccgcgtaagggttggattaatgaagagataaggtggtgatttaaacggttgatat |
29293974 |
T |
|
| Q |
212 |
agagtaatgatgaggaatccataatg |
237 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
29293973 |
agagtaatgatgaggaatccataatg |
29293948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 237
Target Start/End: Complemental strand, 23658828 - 23658623
Alignment:
| Q |
32 |
gaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaact |
131 |
Q |
| |
|
|||||||||||| | |||||||| ||| ||||| |||||||| ||| |||||||||||||||| ||||| | ||||||||||| ||||||||| | |
|
|
| T |
23658828 |
gaatgaggaatatggtatgatattaggaataaagtttatagatt--ctagaatagatgagagaataatgtatgttcgtaaaatgaatagtaaaataaaat |
23658731 |
T |
|
| Q |
132 |
agagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaat |
229 |
Q |
| |
|
| ||||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||| ||||||||| |
|
|
| T |
23658730 |
atagggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaataatgaggaat |
23658631 |
T |
|
| Q |
230 |
ccataatg |
237 |
Q |
| |
|
|||||||| |
|
|
| T |
23658630 |
ccataatg |
23658623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 23658010 - 23657858
Alignment:
| Q |
87 |
atgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagaga |
186 |
Q |
| |
|
||||||||||| ||||| | ||||||||||| ||||||||| || ||||| ||||| | |||| ||| | || |||||||||||||||| |||||||| |
|
|
| T |
23658010 |
atgagagaataatgtatgttcgtaaaatgaatactaaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagaga |
23657911 |
T |
|
| Q |
187 |
t--aaggtggtgataaacggttgatatagagtaatgatgaggaatccataatg |
237 |
Q |
| |
|
| || | | |||||||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
23657910 |
tacaattttgatataaacggttgatagagatgaataatgaggaatccataatg |
23657858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 136; Significance: 4e-71; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 23656264 - 23656486
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| | ||||||||||||| | |||||||||||| |
|
|
| T |
23656264 |
acatattgagactaggaatgaggaataggatatgatatcagggataaagtttatagagagcctagaataaaggagagaatagagtgttcccataaaatga |
23656363 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||| ||||||| |||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||| ||| |
|
|
| T |
23656364 |
ataatgaaataaaatagatggatgttgacgtagaaatgagtcatgtgtaagggttggattaataaagagataaggtgatgatataaacggttgatagaga |
23656463 |
T |
|
| Q |
215 |
gtaatgatgaggaatccataatg |
237 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
23656464 |
gtaatgatgaggaatccataatg |
23656486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 44586264 - 44586483
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||| |||| |||||| ||| ||||||| |||||||| | ||||||||||||||| ||||||||||| |
|
|
| T |
44586264 |
acatcttgagcctaagaatgaggaataggatatgatgtcagagataaagtttttagagagtctataataaaggagagaatagagtatttccataaaatga |
44586363 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |
|
|
| T |
44586364 |
ataatgaaataaaatagagggatgttgacatagaaatgagtcatgcgtaagggttggattaataaagagataaggtggtgatataaacggttgatagaga |
44586463 |
T |
|
| Q |
215 |
gtaatgatgaggaatccata |
234 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
44586464 |
gtaatgatgaggaatccata |
44586483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 24786459 - 24786293
Alignment:
| Q |
25 |
agactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaa |
124 |
Q |
| |
|
|||||| |||||||||||| ||||||||||| ||||| | |||||| ||||| ||||||||||||||||||| | | | | | |||||||||||| |
|
|
| T |
24786459 |
agactaagaatgaggaatagagtatgatatcaga-ataaagtatatagattgcctagaatagatgagagaatagagcacgtctgtgagatgaataataaa |
24786361 |
T |
|
| Q |
125 |
ataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtg |
193 |
Q |
| |
|
||||| || ||||||||||| | || ||| |||||||||||||| | |||||||||| ||| |||||| |
|
|
| T |
24786360 |
ataaaataaagggatgttgacgtag-aataagtcacacgtaaggtatagattaatgaaaagagaaggtg |
24786293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 16862458 - 16862390
Alignment:
| Q |
165 |
aagggttggattaatgaagagataaggtggtgata--aacggttgatatagagtaatgatgaggaatcc |
231 |
Q |
| |
|
|||||||||||||||||||||| | ||||| ||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
16862458 |
aagggttggattaatgaagagaataagtggtaatataaacggttgataaagactaatgatgaggaatcc |
16862390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 18231282 - 18231500
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||| |||||| |||| | ||||||| ||||| | |||||||||||| |
|
|
| T |
18231282 |
acatcttgagactcggaatgaggaata-gatatgatatcagagataaagtttatagatagcctaaaataaaggagagaaaagagtgttcccataaaatga |
18231380 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||| ||||||| ||||||||| ||| || |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||| |
|
|
| T |
18231381 |
ataatgaaataaaatagagggatcttggtgtagaaatgagtcatgcgtaagggttggattaataaagagataaggtggtgatataaacggttgatagaga |
18231480 |
T |
|
| Q |
215 |
gtaatgatgaggaatccata |
234 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
18231481 |
gtaatgatgaggaatccata |
18231500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 11556237 - 11556019
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||| | |||||||| |||||| ||||||||||| |
|
|
| T |
11556237 |
acatcttgagattaggaatgaggaataagatatgatatcagagataagttt-atagagagcctaaaataaaggagagaattgagtatttccataaaatga |
11556139 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||| || |||| |||||||||||||| | |||||||||||| ||||||||||||||| || |||||||||||||||| ||||| |||||||| ||| |
|
|
| T |
11556138 |
ataatgaattaaaatagagggatgttgacgtagaaatgagtcatgcgtaagggttggattgataaagagataaggtggtgatataaatggttgatagaga |
11556039 |
T |
|
| Q |
215 |
gtaatgatgaggaatccata |
234 |
Q |
| |
|
|||||||||| ||||||||| |
|
|
| T |
11556038 |
gtaatgatgatgaatccata |
11556019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 15872659 - 15872880
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| |||||| |||| | ||||||||||||||||||||||| | |||||||||| | ||| |||| |
|
|
| T |
15872659 |
acatcttgagactaagaatgagtaataggttatgctatcagaagtaaagtatatagagagcctataatagatgaagggatagagtatgtcggtaagatga |
15872758 |
T |
|
| Q |
117 |
-----ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgat |
209 |
Q |
| |
|
||||||||||||| ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||||| ||||| |||||| |
|
|
| T |
15872759 |
ataatataataaaataaaatagagagatgttgatatagaaatgagtcacgcgtaagagttggattaatgaagagaataagtggtgatataaatagttgat |
15872858 |
T |
|
| Q |
210 |
atagagtaatgatgaggaatcc |
231 |
Q |
| |
|
| ||||||||||||| |||||| |
|
|
| T |
15872859 |
agagagtaatgatgatgaatcc |
15872880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 12229111 - 12229038
Alignment:
| Q |
113 |
atgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagaga |
186 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
12229111 |
atgaataataaaataaaatagtgggatgttgatgtagaaatgagtcacgcgtaagggttggtttaatgaagaga |
12229038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 16284842 - 16285022
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatca-gggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaa |
117 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||||||| |||||||| | |||||| |||| ||||||||||||||||||||| | | | | ||||| |
|
|
| T |
16284842 |
atcttgagactgagaatgagaaataggatatgatatcaggggataaagtatatagaaggccttgaatagatgagagaatagagtacgtctgtgagatgaa |
16284941 |
T |
|
| Q |
118 |
taataaaataaactagagggatgttgatgcaga-aatgagtcacacgtaagggttggattaatgaagagataaggtggtgata |
199 |
Q |
| |
|
|| ||||||||| || | |||||||| ||| | |||||||||| ||||||| |||| ||| || |||||||||||||||| |
|
|
| T |
16284942 |
tactaaaataaaataaatggatgttg--gcatagaatgagtcacgcgtaaggtgtggaataacgacaagataaggtggtgata |
16285022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 17338015 - 17337864
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||||||| | ||||| |||| | |||||||| || ||||| | || |||||||||| |||||||| ||| | | | |||| | ||| |||| |
|
|
| T |
17338015 |
acatcttgagacttaggatgagaaatagggtatgatattagaaataaagtatacagagagcctagaatagatgcgaggacataatatgtctgtaagatga |
17337916 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagg |
168 |
Q |
| |
|
|||||||||||| |||||||||||||| | |||||| |||||| ||||||| |
|
|
| T |
17337915 |
gtaataaaataaaatagagggatgttgacgtagaaataagtcacgcgtaagg |
17337864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 15890251 - 15890363
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| |||||| |||| | ||||||||||||| ||||||||| | |||||||||| | ||| |||| |
|
|
| T |
15890251 |
acatcttgagactaagaatgagtaataggttatgctatcagaagtaaagtatatagagagcctagaatagatgaagggatagagtatgtcggtaagatga |
15890350 |
T |
|
| Q |
117 |
ataataaaataaa |
129 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15890351 |
ataatataataaa |
15890363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 3576119 - 3576199
Alignment:
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtgata |
199 |
Q |
| |
|
||||||||||| || ||||||||||| | || ||||||||| |||||||||| |||| || ||||||| ||||||||| |
|
|
| T |
3576119 |
aataaaataaaataaagggatgttgacgtaggaatgagtcatgattaagggttgggttaaagaggagataatgtggtgata |
3576199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0737 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0737
Description:
Target: scaffold0737; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 3474 - 3696
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||| | |
|
|
| T |
3474 |
acatcttgacactaggaatgaggaataggatatgatatcagggataaagtttatagagaacctagaatagagcagagaatagagtatgcccataaaataa |
3573 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||||||||||| || |||| |||||| | ||||||||||||| | || ||| ||| |||||||||||||||||||| ||||||||| |||| ||| |
|
|
| T |
3574 |
ataataaaataaaatataggggtgttgacgtagaaatgagtcacgcacaaaagttcgatgaatgaagagataaggtggtgatataaacggtagatagaga |
3673 |
T |
|
| Q |
215 |
gtaatgatgaggaatccataatg |
237 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
3674 |
gtaatgatgaggaaaccataatg |
3696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 9191349 - 9191133
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||| |||| |||||| ||||| | |||||||||||||||||| |||||||||| | || ||||| ||||||||||| |||| |||||| |||| |
|
|
| T |
9191349 |
acatcttgaaactaagaatgaagaatagggtatgatatcagggataaagtttatagagatcttaggatagacgagagaatagattatgtccataagatga |
9191250 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|||||||||| | |||||||||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
9191249 |
ataataaaatcatatagagggatgttgacgtagaaatgcatcacacgtaagagttggattaatgaagagataaggtggtgatataaacggttgatagaga |
9191150 |
T |
|
| Q |
215 |
gtaatgatgaggaatcc |
231 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
9191149 |
gtaatgatgaggaatcc |
9191133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 231
Target Start/End: Original strand, 10906580 - 10906745
Alignment:
| Q |
68 |
tatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaag |
167 |
Q |
| |
|
||||||| | ||| |||||| || ||||||||||||| || ||||| ||||||||||||||| ||||||||| |||| | ||||||||| |||| ||||| |
|
|
| T |
10906580 |
tatagagggtctagaatagacgaaagaatagagtatgtccgtaaaacgaataataaaataaaatagagggatattgacgtagaaatgagccacatgtaag |
10906679 |
T |
|
| Q |
168 |
ggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatcc |
231 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||| | |||||||||| ||||||||| |
|
|
| T |
10906680 |
ggttggattaatgaataggtaaggtggtgatataaacggttgacaaagagtaatgacgaggaatcc |
10906745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 8403701 - 8403814
Alignment:
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagt |
216 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||| |||||||||| ||| ||||| |
|
|
| T |
8403701 |
aataaaataaaatagagggatgttgatgtagaaatgagtcacgcgtaagggttggattaatgaagagaataagtggtgatataaacggttaatagagagt |
8403800 |
T |
|
| Q |
217 |
aatgatgaggaatc |
230 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8403801 |
aatgatgaggaatc |
8403814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 14980073 - 14980289
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||||||| |||||||||||||||||||| ||||| | ||||| |||||| |
|
|
| T |
14980073 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagagt--ctataatagatgagagaatattgtatgttcgtaaaaggaataa |
14980170 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || | ||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
14980171 |
taaaataaaatataaggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
14980270 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
14980271 |
taatgaggaatccataatg |
14980289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 14970383 - 14970175
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaat |
118 |
Q |
| |
|
||||| |||||| |||| ||||||| | |||| |||||| ||||| | ||||||| ||||| ||||||| ||||||||||||| | | | | |||| |
|
|
| T |
14970383 |
atcttaagactaagaattaggaatagggtatggtatcaga-ataaagtatatagagggcctagaatagataagagaatagagtacctctctgagaagaat |
14970285 |
T |
|
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagt |
216 |
Q |
| |
|
||||||||||| || ||| ||||||||| |||| |||||||| ||||| | ||||||||||||||||||| |||||| ||||| || ||||| ||||| |
|
|
| T |
14970284 |
aataaaataaaataaaggaatgttgatgtagaa-tgagtcactcgtaaagtgtggattaatgaagagataaagtggtgatataaatggatgatagagagt |
14970186 |
T |
|
| Q |
217 |
aatgatgagga |
227 |
Q |
| |
|
||||||||||| |
|
|
| T |
14970185 |
aatgatgagga |
14970175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 10641221 - 10641336
Alignment:
| Q |
113 |
atgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgata |
210 |
Q |
| |
|
||||||||||||||||| || | |||||||| | |||| |||||||||||| ||| |||||||||||||||||||||||||| |||| ||| ||||| |
|
|
| T |
10641221 |
atgaataataaaataaagtaaatggatgttggcgtagaa-tgagtcacacgtgaggcgtggattaatgaagagataaggtggtgatataagcggatgata |
10641319 |
T |
|
| Q |
211 |
tagagtaatgatgagga |
227 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
10641320 |
gagagtaatgacgagga |
10641336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 237
Target Start/End: Original strand, 14989196 - 14989401
Alignment:
| Q |
32 |
gaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaact |
131 |
Q |
| |
|
||||||||||| | ||| |||| ||| ||||| ||||||||| ||| |||| ||||||||||| ||||| | |||||| |||| ||||||||| | |
|
|
| T |
14989196 |
gaatgaggaatttggtattatattaggaataaagtttatagagt--ctagaataaatgagagaataatgtatgttcgtaaaataaatactaaaataaaat |
14989293 |
T |
|
| Q |
132 |
agagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaat |
229 |
Q |
| |
|
| ||||| ||||| | |||| ||| | | ||||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||| |||| |||| |
|
|
| T |
14989294 |
atagggaagttgacgtagaattgaattaagagtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaataatgacgaat |
14989393 |
T |
|
| Q |
230 |
ccataatg |
237 |
Q |
| |
|
|||||||| |
|
|
| T |
14989394 |
ccataatg |
14989401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 1566873 - 1567082
Alignment:
| Q |
18 |
catcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaa |
117 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||| ||||||||| |||||| || ||||||||| |
|
|
| T |
1566873 |
catcttgagactaagaatgaggaataggatatggtatcagggataaagtttatagagagcctagaatagaagagagaataaagtatgtccgtaaaatgaa |
1566972 |
T |
|
| Q |
118 |
taataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagag |
215 |
Q |
| |
|
||||||||||| || || |||| | ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||| || | |
|
|
| T |
1566973 |
taataaaataa-----agagacattgacgtagaaatgagtcacacgtaagggttggattaatgaagagacaatgtggtgatataaacggtggatagaggg |
1567067 |
T |
|
| Q |
216 |
taatgatgaggaatc |
230 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
1567068 |
taataatgaggaatc |
1567082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 51626805 - 51626970
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| |||||||||||||| | |||||||||||| ||||| ||||||||| |||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
51626805 |
cttgagaccaggaatgaggaatatggtatgatatcaggaataaagtttatagag--cctagaatagatgagagaataatgtatgttcctaaaatgaatac |
51626902 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagata |
188 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || ||||||||||||||||||||||||||| |
|
|
| T |
51626903 |
taaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattaatgaagagata |
51626970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 15541943 - 15541807
Alignment:
| Q |
93 |
gaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggt |
192 |
Q |
| |
|
|||||||||||| |||||| | |||||||||||| | |||||||| ||||| | |||||||||||| |||||||||| |||||||||| |||| ||| |
|
|
| T |
15541943 |
gaatagagtatgtccataagaagaataataaaatgacatagagggacgttgaagtagaaatgagtcaggcgtaagggttttattaatgaagcgatatggt |
15541844 |
T |
|
| Q |
193 |
ggtgataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
||| |||||| ||||||| ||||||| ||||||||||| |
|
|
| T |
15541843 |
ggt-ataaacagttgatagagagtaaagatgaggaatc |
15541807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 13882067 - 13882232
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| |||||||| ||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
13882067 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagatt--ctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
13882164 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagata |
188 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || | |||||||||||||| |||||||||| |
|
|
| T |
13882165 |
taaaataaaatatagggaagttgacgtagaattgaattacgcttaagggttggattagtgaagagata |
13882232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 4531563 - 4531775
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaat |
118 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| || ||||||||| ||||||||||||||| |||| | ||||||| ||||||||||||| |
|
|
| T |
4531563 |
atcttgagactaggaatagggaataggatatgaaattagggataaagtttatagagagcctaaaataaaggagagaact--------ccataaaatgaat |
4531654 |
T |
|
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagt |
216 |
Q |
| |
|
||||||||||| ||||||| ||||| | | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4531655 |
aataaaataaaatagaggggtgttggcgtataaatgagtcacgtgtaagggttggattaatgaagagataaggtggtgatataaacggttgatagagagt |
4531754 |
T |
|
| Q |
217 |
aatgatgaggaatccataatg |
237 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4531755 |
aatgatgaggaatccataatg |
4531775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 37945627 - 37945842
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||| |||||||| ||||||| |||| | |||||||| | ||||| | |||||||||||| |||||||| ||||| |||||||| || ||| |||| |
|
|
| T |
37945627 |
acatcgtgagactaagaatgagaaatagggtatgatatttgaaataaagtagatagagagcctagaatagatgcgagaacagagtatgtccgtaagatga |
37945726 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|||||||| |||| |||||| ||||||| | ||||||||||||| | |||||||| ||||||||||||||| |||||| ||||| |||||||| | | |
|
|
| T |
37945727 |
ataataaattaaaatagaggaatgttgacgtagaaatgagtcacgcataagggtttgattaatgaagagatttagtggtggtataaagggttgatagata |
37945826 |
T |
|
| Q |
215 |
gtaatgatgaggaatc |
230 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
37945827 |
gtaatgatgaggaatc |
37945842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 16060817 - 16060601
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||||||| ||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
16060817 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagagt--ctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
16060720 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
16060719 |
taaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
16060620 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| |||||||||| |||||| |
|
|
| T |
16060619 |
taatgaggaatctataatg |
16060601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 48377092 - 48376876
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| || |||||| |||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
48377092 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagttcatagag--cctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
48376995 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
48376994 |
taaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
48376895 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| |||||||||| |||||| |
|
|
| T |
48376894 |
taatgaggaatctataatg |
48376876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 20026291 - 20026113
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaat |
118 |
Q |
| |
|
||||| || ||| |||||| ||||| | ||||||||||| ||||| | |||| || ||||| |||||||||||||||| |||| | | ||| |||||| |
|
|
| T |
20026291 |
atcttaaggctaagaatgatgaatagggtatgatatcaga-ataaagtatatatagggcctagaatagatgagagaatatagtacgtctgtaagatgaat |
20026193 |
T |
|
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtgata |
199 |
Q |
| |
|
||||||||| | || ||||||||||| | ||||||||||| ||||||| | |||||||||||||||||||| |||||| |
|
|
| T |
20026192 |
aataaaatagaataaagggatgttgacgtc-aaatgagtcacgcgtaaggtgttgattaatgaagagataaggttgtgata |
20026113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 14481431 - 14481642
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| | |||| || | || ||||||||||||||||||||||| | | | |||| |
|
|
| T |
14481431 |
acatcttgagactaggaatgaaaaataagatatgatatcagggataaagtatatatagggtcttgaatagatgagagaatagagtatgtctgtgagatga |
14481530 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtga--taaacggttgatataga |
214 |
Q |
| |
|
||||||||||||| || |||||||||| | || |||||||||| ||||||| |||||||||||||||||| |||||| ||| ||| ||||| ||| |
|
|
| T |
14481531 |
ataataaaataaaataaagggatgttggcgtag-aatgagtcacgcgtaaggagtggattaatgaagagatacaatggtgatgtaagcggatgatagaga |
14481629 |
T |
|
| Q |
215 |
gtaatgatgagga |
227 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14481630 |
gtaatgatgagga |
14481642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 21975510 - 21975293
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| ||||| |||| | || |||||||| | ||||||||| | |||||||||| | ||||||||| |
|
|
| T |
21975510 |
acatcttgagactaagaatgagtaataggttatgctatcataagtaaagtataaagagagccgaaaatagatgatgggatagagtatgtctataaaatga |
21975411 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||| | || |||||||||||| |||||| | ||||| |||||||||||||| ||| |
|
|
| T |
21975410 |
ataataaaataaaatagagggatgttgatgtagaaatgagtcatgtgcaaaggttggattaatcaagagaataaatggtgatataaacggttgatagaga |
21975311 |
T |
|
| Q |
215 |
gtaatgatgaggaatcca |
232 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
21975310 |
gtaatgatgaggaatcca |
21975293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 21997941 - 21997724
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| ||||| |||| | || |||||||| | ||||||||| | |||||||||| | ||||||||| |
|
|
| T |
21997941 |
acatcttgagactaagaatgagtaataggttatgctatcataagtaaagtataaagagagccgaaaatagatgatgggatagagtatgtctataaaatga |
21997842 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||| | || |||||||||||| |||||| | ||||| |||||||||||||| ||| |
|
|
| T |
21997841 |
ataataaaataaaatagagggatgttgatgtagaaatgagtcatgtgcaaaggttggattaatcaagagaataaatggtgatataaacggttgatagaga |
21997742 |
T |
|
| Q |
215 |
gtaatgatgaggaatcca |
232 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
21997741 |
gtaatgatgaggaatcca |
21997724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 13926725 - 13926874
Alignment:
| Q |
90 |
agagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataa |
189 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||||||||| |||||||||| ||| | || |||| || || ||||||||||| ||||||||||| |||| |
|
|
| T |
13926725 |
agagaatagagtatgtccataagatgattaataaaataaaatagagggatgatgacgtaggaatgtgttacgcgtaagggttgaattaatgaagaaataa |
13926824 |
T |
|
| Q |
190 |
ggtggt--gataaacggttgatatagagtaatgatgaggaatccataatg |
237 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
13926825 |
agtggttatataaacggttgatagagagtaacgatgaggaatccataatg |
13926874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 4712610 - 4712826
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||||||| |||||||||||||||||||| ||||| | ||||| |||||| |
|
|
| T |
4712610 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagagt--ctataatagatgagagaatattgtatgttcgtaaaaggaataa |
4712707 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || | ||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
4712708 |
taaaataaaatataaggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
4712807 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
4712808 |
taatgaggaatccataatg |
4712826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 16642602 - 16642386
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||||||| ||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
16642602 |
cttgagaccaagaatgaggaatatggtatgatattaggaataaagtttatagagt--ctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
16642505 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || |||||||||||||||| |||||||||| ||||| |||||| ||||||| ||| || |
|
|
| T |
16642504 |
taaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattagtgaagagatacaatggtgatataaacagttgatagagatgaa |
16642405 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
16642404 |
taatgaggaatccataatg |
16642386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 5943749 - 5943876
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||||| | ||||| |||||| | | |||| ||||||||||| ||||||||||| |||||| |||| |
|
|
| T |
5943749 |
acatcttgagactaagaatgaggaatagggaatgatatcggaaataaagtttatatatatcctagaatagatgagaaaatagagtatgtccataagatga |
5943848 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttga |
144 |
Q |
| |
|
||||||||||||| |||||||||||||| |
|
|
| T |
5943849 |
ataataaaataaaatagagggatgttga |
5943876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 27870323 - 27870496
Alignment:
| Q |
25 |
agactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaa |
124 |
Q |
| |
|
|||||| |||||||||||| | |||||||||| ||||| | |||| ||| |||| ||||||||||| ||||||||||| | | | || |||||||| |
|
|
| T |
27870323 |
agactaagaatgaggaatatggtatgatatcata-ataaagtatatatagatcctagaatagatgagaaaatagagtatgtctgtgagatagataataaa |
27870421 |
T |
|
| Q |
125 |
ataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtgata |
199 |
Q |
| |
|
||||| ||||||||| ||| | |||||||||| |||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
27870422 |
ataaaatagagggatagtgacgtggaaatgagtcgcacgtaagggttggattaatgaagggataatgtggtgata |
27870496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 16359390 - 16359611
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| |||||| |||| | ||||||||||||||||||||||| | |||||||||| ||| |||| |
|
|
| T |
16359390 |
acatcttgagactaagaatgagtaataggttatgctatcagaagtaaagtatatagagagcctataatagatgaagggatagagtatgttggtaagatga |
16359489 |
T |
|
| Q |
117 |
ataa-----taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgat |
209 |
Q |
| |
|
|||| ||||||||| ||||| ||| |||||| |||||||| |||| |||||||||||||||||| ||| || | |||||| ||||| |||||| |
|
|
| T |
16359490 |
ataatataataaaataaaatagagagattttgatgtagaaatgactcacgcgtaagggttggattaatcaagggaataagtggtgatataaatagttgat |
16359589 |
T |
|
| Q |
210 |
atagagtaatgatgaggaatcc |
231 |
Q |
| |
|
| | ||||||||||| |||||| |
|
|
| T |
16359590 |
agacagtaatgatgatgaatcc |
16359611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 22160012 - 22159890
Alignment:
| Q |
111 |
aaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttga |
208 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||| |||||| ||||| | || |||||||||||| |||||| | ||||| |||||||||||| |
|
|
| T |
22160012 |
aaatgaataataaaataaaatagagggattttgatgtagaaattagtcatgtgcaaaggttggattaatcaagagaataaatggtgatataaacggttga |
22159913 |
T |
|
| Q |
209 |
tatagagtaatgatgaggaatcc |
231 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
22159912 |
tagagagtaatgatgaggaatcc |
22159890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 17791199 - 17790988
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||| ||| | |||||| ||||||| |||| |||||||||||||||||||||||| | | ||| |
|
|
| T |
17791199 |
acatcttgacactaggaatgaggaattggatatgataacagaggtaaattatatagagggcctcgaatagatgagagaatagagtatgcttgtgaggtga |
17791100 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|||||| ||||| || |||||||| | || |||||| ||| |||| | ||||||||||||||||||||||| || |||| ||| ||| | ||| |
|
|
| T |
17791099 |
ataatacgataaagtaaagggatgtcagcgtag-aatgagccacgagtaaagtgtggattaatgaagagataaggtgatggtataagcggatgaaagaga |
17791001 |
T |
|
| Q |
215 |
gtaatgatgagga |
227 |
Q |
| |
|
||||||||||||| |
|
|
| T |
17791000 |
gtaatgatgagga |
17790988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 227
Target Start/End: Complemental strand, 19099639 - 19099428
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatga |
116 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||| ||| | |||||| ||||||| |||| |||||||||||||||||||||||| | | ||| |
|
|
| T |
19099639 |
acatcttgacactaggaatgaggaattggatatgataacagaggtaaattatatagagggcctcgaatagatgagagaatagagtatgcttgtgaggtga |
19099540 |
T |
|
| Q |
117 |
ataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|||||| ||||| || |||||||| | || |||||| ||| |||| | ||||||||||||||||||||||| || |||| ||| ||| | ||| |
|
|
| T |
19099539 |
ataatacgataaagtaaagggatgtcagcgtag-aatgagccacgagtaaagtgtggattaatgaagagataaggtgatggtataagcggatgaaagaga |
19099441 |
T |
|
| Q |
215 |
gtaatgatgagga |
227 |
Q |
| |
|
||||||||||||| |
|
|
| T |
19099440 |
gtaatgatgagga |
19099428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 14062591 - 14062804
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | ||||||||||| ||||| ||||||||| |||| |||||||||||| ||| ||||| | ||||||||||| |
|
|
| T |
14062591 |
cttgagaccaagaatgaggaatatggcatgatatcaggaataaagtttatagag--cctagaatagatgagaggataatgtatgttcgtaaaatgaatat |
14062688 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
| |||| || ||||| ||||| | |||| ||| | || ||||||||||||||||||||||| ||| ||||| |||||||||||||| ||| || |
|
|
| T |
14062689 |
---actaaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattaatgaagatatacaatggtgatataaacggttgatagagatgaa |
14062785 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||| ||||||||| |
|
|
| T |
14062786 |
taatgaggattccataatg |
14062804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 14054933 - 14055066
Alignment:
| Q |
109 |
taaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggtt |
206 |
Q |
| |
|
||||||||||| ||||||||| || ||||| ||||| | |||| ||| | || ||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
14054933 |
taaaatgaatactaaaataaaatatagggaagttgacgtagaattgaattacgcgtaagggttggattaatgaagagatacaatggtgatataaacggtt |
14055032 |
T |
|
| Q |
207 |
gatatagagtaatgatgaggaatccataatgcga |
240 |
Q |
| |
|
||| ||| ||| ||||||| || ||||||||| |
|
|
| T |
14055033 |
aatagagatgaataatgaggattctataatgcga |
14055066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0166 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0166
Description:
Target: scaffold0166; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 321 - 161
Alignment:
| Q |
72 |
gagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggtt |
171 |
Q |
| |
|
||||||||| |||||||||||||||| | |||| || ||| |||| |||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| |
|
|
| T |
321 |
gagagcctagaatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagagggatgttgacgtagaaatgagtcacgcgtaagagtt |
222 |
T |
|
| Q |
172 |
ggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
|| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
221 |
agaataatgaagaaataaagtggtgatataaatggttgatagagagtaatgatgaggaatc |
161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 24757842 - 24757682
Alignment:
| Q |
72 |
gagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggtt |
171 |
Q |
| |
|
||||||||| |||||||||||||||| | |||| || ||| |||| |||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| |
|
|
| T |
24757842 |
gagagcctagaatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagagggatgttgacgtagaaatgagtcacgcgtaagagtt |
24757743 |
T |
|
| Q |
172 |
ggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
|| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
24757742 |
agaataatgaagaaataaagtggtgatataaatggttgatagagagtaatgatgaggaatc |
24757682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 24615680 - 24615522
Alignment:
| Q |
74 |
gagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttgg |
173 |
Q |
| |
|
||||||| |||||||||||||||| | |||| || ||| |||| |||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| | |
|
|
| T |
24615680 |
gagcctagaatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagagggatgttgacgtagaaatgagtcacgcgtaagagttag |
24615581 |
T |
|
| Q |
174 |
attaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
24615580 |
aataatgaagaaataaagtggtgatataaatggttgatagagagtaatgatgaggaatc |
24615522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 24712078 - 24711920
Alignment:
| Q |
74 |
gagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttgg |
173 |
Q |
| |
|
||||||| |||||||||||||||| | |||| || ||| |||| |||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| | |
|
|
| T |
24712078 |
gagcctagaatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagagggatgttgacgtagaaatgagtcacgcgtaagagttag |
24711979 |
T |
|
| Q |
174 |
attaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
24711978 |
aataatgaagaaataaagtggtgatataaatggttgatagagagtaatgatgaggaatc |
24711920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 24745074 - 24744916
Alignment:
| Q |
74 |
gagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttgg |
173 |
Q |
| |
|
||||||| |||||||||||||||| | |||| || ||| |||| |||||||||||| |||||||||||||| | ||||||||||||| |||||| ||| | |
|
|
| T |
24745074 |
gagcctagaatagatgagagaataaaatatgtccttaatatgattaataaaataaaatagagggatgttgacgtagaaatgagtcacgcgtaagagttag |
24744975 |
T |
|
| Q |
174 |
attaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaatc |
230 |
Q |
| |
|
| ||||||||| |||| |||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
24744974 |
aataatgaagaaataaagtggtgatataaatggttgatagagagtaatgatgaggaatc |
24744916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 24831833 - 24832042
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaat |
118 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| | |||| || |||| |||||| |||||||||||||||| | | | |||||| |
|
|
| T |
24831833 |
atcttgagactaggaatgaaaaataagatatgatatcagggataaagtatatatagggccttgaatagaagagagaatagagtatgtctgtgagatgaat |
24831932 |
T |
|
| Q |
119 |
aataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtga--taaacggttgatatagagt |
216 |
Q |
| |
|
||||||||||| || |||||||||| | || |||||||||| ||||||| | || ||||||||||||| | |||||| ||| ||| ||||| ||||| |
|
|
| T |
24831933 |
aataaaataaaataaagggatgttggcgtag-aatgagtcacgcgtaaggagttgactaatgaagagatacgatggtgatgtaagcggatgatagagagt |
24832031 |
T |
|
| Q |
217 |
aatgatgagga |
227 |
Q |
| |
|
||||||||||| |
|
|
| T |
24832032 |
aatgatgagga |
24832042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13936021 - 13935807
Alignment:
| Q |
18 |
catcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaa |
117 |
Q |
| |
|
||||| ||||||| |||||||| |||| ||||||||||| | ||| | || ||||||||| || || |||||||||| |||||| || |||| ||| |
|
|
| T |
13936021 |
catctcgagactaagaatgagggataatatatgatatcataaacaaagtatacggagagcctagaaaaggtgagagaataaagtatgtccgtaaagtgat |
13935922 |
T |
|
| Q |
118 |
taataaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaa-gagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|||||||||||| ||||| |||||| | | ||||||||||||||||| ||||||||||||||||| ||| ||| |||||| |||||||||||||| ||| |
|
|
| T |
13935921 |
taataaaataaaatagagtgatgttaacgtagaaatgagtcacacgt-agggttggattaatgaatgag-taatgtggtgatataaacggttgatagaga |
13935824 |
T |
|
| Q |
215 |
gtaatgatgaggaatcc |
231 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
13935823 |
gtaatgattaggaatcc |
13935807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 23960796 - 23960869
Alignment:
| Q |
86 |
gatgagagaatagagtatgcccataaaatgaataataaaataaactagagggatgttgatgcagaaatgagtca |
159 |
Q |
| |
|
|||||| |||||||||||| || ||| |||||| |||||| ||| |||||||||||||| | |||||||||||| |
|
|
| T |
23960796 |
gatgagggaatagagtatgtccgtaagatgaatgataaaacaaaatagagggatgttgacgtagaaatgagtca |
23960869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1269 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1269
Description:
Target: scaffold1269; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 283 - 67
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
283 |
cttgagaccaagaatgaggaatatgatatgatatcaggaataaagtttat--agagcctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
186 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| |||| ||| | || | ||||||||||||||||||||||||| ||||| ||||||| |||||| ||| || |
|
|
| T |
185 |
taaaataaaatatagggaagttgacttagaattgaattacgcataagggttggattaatgaagagatacaatggtgatataaacgtttgatagagatgaa |
86 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||| ||||||||| |
|
|
| T |
85 |
taatgaggattccataatg |
67 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 13380 - 13592
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| |||||||| | ||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
13380 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagaaa--ctagaatagatgagagaataatgtatgttcgtaaaatgaatac |
13477 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | || ||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
13478 |
taaaataaaatatagggaagttgacgtagaattgaattacgagtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
13577 |
T |
|
| Q |
219 |
tgatgaggaatccat |
233 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
13578 |
taatgaggaatccat |
13592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 237
Target Start/End: Complemental strand, 131076 - 130871
Alignment:
| Q |
32 |
gaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaaataaact |
131 |
Q |
| |
|
|||||||||||| | |||||||| ||| ||||| |||||||| ||| |||||||||||||||| ||||| | ||||||||||| ||||||||| | |
|
|
| T |
131076 |
gaatgaggaatagggtatgatattaggaataaagtttatagatt--ctagaatagatgagagaataatgtatgttcgtaaaatgaatactaaaataaaat |
130979 |
T |
|
| Q |
132 |
agagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaatgatgaggaat |
229 |
Q |
| |
|
| ||||| ||||| | |||| ||| | || ||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||| |||||||| |
|
|
| T |
130978 |
atagggaagttgacgtagaattgaattacgcgtaagggttggattggtgaagagatacaatggtgatataaacggttgatatagatgaatagtgaggaat |
130879 |
T |
|
| Q |
230 |
ccataatg |
237 |
Q |
| |
|
|||||||| |
|
|
| T |
130878 |
ccataatg |
130871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 29362 - 29146
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||| |||| ||| |||| ||||||||||| ||||| | ||||||||||| |
|
|
| T |
29362 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttat--agagtctagaataaatgagagaataatgtatgttcgtaaaatgaatac |
29265 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
||||||||| || ||||| ||||| | |||| ||| | | ||||||||||||||| |||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
29264 |
taaaataaaatatagggaagttgacgtagaattgaattatgtgtaagggttggattagtgaagagatacaatggtgatataaacggttgatagagatgaa |
29165 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
29164 |
taatgaggaatccataatg |
29146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 14682 - 14466
Alignment:
| Q |
21 |
cttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataa |
120 |
Q |
| |
|
|||||||| | |||||||||||| | |||||||| ||| ||||| ||||||||| |||| |||||| ||||||||| ||||| | ||||||||||| |
|
|
| T |
14682 |
cttgagaccaagaatgaggaatagggtatgatattaggaataaagtttatagag--cctagaatagacgagagaataatgtatgttcgtaaaatgaatac |
14585 |
T |
|
| Q |
121 |
taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatatagagtaa |
218 |
Q |
| |
|
|||||||| || ||||| | ||| | |||| ||| | || | |||||||||||||| ||||||||| ||||| |||||||||||||| ||| || |
|
|
| T |
14584 |
gaaaataaaatatagggaagctgacgtagaattgaattacgcataagggttggattagtgaagagatgcaatggtgatataaacggttgatagagatgaa |
14485 |
T |
|
| Q |
219 |
tgatgaggaatccataatg |
237 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
14484 |
taatgaggaatccataatg |
14466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0385 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 14529 - 14308
Alignment:
| Q |
17 |
acatcttgagactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaat-- |
114 |
Q |
| |
|
|||||||||||||| ||||||| |||| | |||| |||||| |||| | |||||||||||| ||||||||| | |||||||||| | ||| || |
|
|
| T |
14529 |
acatcttgagactaagaatgagtaataggttatgctatcagaagtaaagtatatagagagcctggaatagatgatgggatagagtatgtctgtaagatca |
14430 |
T |
|
| Q |
115 |
-gaataa--taaaataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgat |
209 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||| ||| | |||| | ||||||||||||| |
|
|
| T |
14429 |
agaataaaataaaataaaatagagggatgttgatgtagaaatgagtcatgtgtaaaagttggattaatgaaaagaataagtggagatataaacggttgat |
14330 |
T |
|
| Q |
210 |
atagagtaatgatgaggaatcc |
231 |
Q |
| |
|
| ||||||| ||||||||||| |
|
|
| T |
14329 |
agagagtaacaatgaggaatcc |
14308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 12875 - 12669
Alignment:
| Q |
19 |
atcttgagactaggaatgaggaataagatatgatatcag-ggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaa |
117 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||||||||| ||||||| | |||||| |||| ||||||||||||||||||||| | | | | ||||| |
|
|
| T |
12875 |
atcttgagactgagaatgagaaataggatatgatatcagaggataaagtatatagaaggccttgaatagatgagagaatagagtacgtctgtgagatgaa |
12776 |
T |
|
| Q |
118 |
taataaaataaactagagggatgttgatgcaga-aatgagtcacacgtaagggttggattaatgaagagataaggtggtg--ataaacggttgatataga |
214 |
Q |
| |
|
|| ||||||||| || | |||||||| ||| | |||||||||| ||||||| |||| ||| || ||||||||||||| |||| ||| ||||| ||| |
|
|
| T |
12775 |
tactaaaataaaataaatggatgttg--gcatagaatgagtcacgcgtaaggtgtggaataacgacaagataaggtggtgatataagcggatgataaaga |
12678 |
T |
|
| Q |
215 |
gtaatgatg |
223 |
Q |
| |
|
||||||||| |
|
|
| T |
12677 |
gtaatgatg |
12669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 41072 - 41017
Alignment:
| Q |
82 |
aatagatgagagaatagagtatgcccataaaatgaataataaaataaactagaggg |
137 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||||||||||||| ||||||| |
|
|
| T |
41072 |
aatagatgagagaatagagtatgtccgtaaaacgaataataaaataaaatagaggg |
41017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 199
Target Start/End: Original strand, 4513 - 4686
Alignment:
| Q |
25 |
agactaggaatgaggaataagatatgatatcagggataaattttatagagagcctataatagatgagagaatagagtatgcccataaaatgaataataaa |
124 |
Q |
| |
|
|||||| |||||||||||| | |||||||||| ||||| | |||| ||| |||| ||||||||||||||||| |||| | | | ||| |||||||| |
|
|
| T |
4513 |
agactaagaatgaggaatatggtatgatatca-taataaagtatatatagatcctagaatagatgagagaataggatatgtctgtgagatggataataaa |
4611 |
T |
|
| Q |
125 |
ataaactagagggatgttgatgcagaaatgagtcacacgtaagggttggattaatgaagagataaggtggtgata |
199 |
Q |
| |
|
||||| ||||||| | ||| |||||||| || | |||| |||||||||||||| | ||||| |||||||| |
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|
| T |
4612 |
ataaaatagagggttaatgacatagaaatgaatcgcgtgtaatggttggattaatgatgggataatatggtgata |
4686 |
T |
|
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