View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11780_low_34 (Length: 391)

Name: NF11780_low_34
Description: NF11780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11780_low_34
NF11780_low_34
[»] chr3 (71 HSPs)
chr3 (1-385)||(33938922-33939306)
chr3 (1-70)||(45711440-45711509)
chr3 (1-69)||(20547991-20548059)
chr3 (1-69)||(26014814-26014882)
chr3 (1-69)||(27541503-27541571)
chr3 (1-69)||(36671015-36671083)
chr3 (1-68)||(41505494-41505561)
chr3 (3-69)||(6178428-6178494)
chr3 (1-69)||(38926630-38926698)
chr3 (1-69)||(44413921-44413989)
chr3 (9-69)||(47472331-47472391)
chr3 (3-69)||(5244231-5244297)
chr3 (1-69)||(7668188-7668256)
chr3 (9-69)||(41308927-41308987)
chr3 (1-69)||(46623909-46623977)
chr3 (1-69)||(52326021-52326089)
chr3 (11-69)||(50559222-50559281)
chr3 (8-69)||(42357090-42357149)
chr3 (3-69)||(44813136-44813202)
chr3 (8-69)||(52939655-52939714)
chr3 (2-63)||(7933921-7933982)
chr3 (8-69)||(16479634-16479695)
chr3 (8-69)||(37302548-37302609)
chr3 (8-69)||(38671620-38671681)
chr3 (8-69)||(44855955-44856016)
chr3 (13-69)||(52963328-52963385)
chr3 (1-69)||(5114080-5114148)
chr3 (1-69)||(16969567-16969635)
chr3 (1-68)||(17118400-17118467)
chr3 (9-69)||(28539749-28539809)
chr3 (1-69)||(55151717-55151785)
chr3 (3-69)||(288727-288794)
chr3 (3-69)||(14207260-14207327)
chr3 (3-69)||(14215008-14215075)
chr3 (3-69)||(45293031-45293098)
chr3 (3-69)||(49417577-49417644)
chr3 (10-69)||(52254148-52254207)
chr3 (8-69)||(10811137-10811199)
chr3 (1-67)||(16129526-16129592)
chr3 (3-69)||(25641573-25641639)
chr3 (10-67)||(31931028-31931086)
chr3 (3-69)||(35597164-35597230)
chr3 (3-67)||(39629841-39629906)
chr3 (9-69)||(40367610-40367671)
chr3 (9-69)||(13735131-13735191)
chr3 (1-69)||(42358639-42358707)
chr3 (1-48)||(7933998-7934045)
chr3 (3-69)||(8846493-8846560)
chr3 (1-56)||(31157678-31157733)
chr3 (31-69)||(32146016-32146055)
chr3 (13-63)||(43158283-43158334)
chr3 (15-69)||(51137050-51137105)
chr3 (8-69)||(25188472-25188534)
chr3 (8-69)||(29573363-29573425)
chr3 (12-69)||(32362935-32362993)
chr3 (4-69)||(34057956-34058022)
chr3 (8-69)||(37894250-37894312)
chr3 (3-68)||(42672837-42672903)
chr3 (8-69)||(46019464-46019526)
chr3 (1-70)||(47988486-47988555)
chr3 (1-70)||(47997773-47997842)
chr3 (1-70)||(48007060-48007129)
chr3 (8-69)||(55400001-55400063)
chr3 (13-69)||(9862535-9862592)
chr3 (9-69)||(27168690-27168751)
chr3 (1-69)||(31017395-31017463)
chr3 (9-69)||(48352998-48353059)
chr3 (1-69)||(51032625-51032693)
chr3 (1-65)||(51343414-51343479)
chr3 (3-70)||(38471643-38471710)
chr3 (37-65)||(43333565-43333593)
[»] chr8 (48 HSPs)
chr8 (1-69)||(31249525-31249593)
chr8 (1-69)||(22719442-22719510)
chr8 (1-69)||(37449426-37449494)
chr8 (8-69)||(5600994-5601056)
chr8 (8-69)||(5639564-5639626)
chr8 (8-69)||(27325760-27325821)
chr8 (3-69)||(42768209-42768274)
chr8 (3-69)||(43397783-43397849)
chr8 (2-69)||(25987788-25987856)
chr8 (3-69)||(6440083-6440150)
chr8 (3-69)||(32501199-32501265)
chr8 (8-69)||(45405991-45406053)
chr8 (8-69)||(7271854-7271915)
chr8 (3-68)||(44825446-44825511)
chr8 (1-69)||(10692441-10692509)
chr8 (1-69)||(12898930-12898998)
chr8 (2-69)||(26026898-26026966)
chr8 (2-69)||(44061719-44061787)
chr8 (3-69)||(7598710-7598777)
chr8 (3-68)||(9549201-9549267)
chr8 (8-69)||(18651372-18651434)
chr8 (8-69)||(33100476-33100538)
chr8 (12-69)||(34435748-34435806)
chr8 (3-69)||(43715877-43715943)
chr8 (1-69)||(11253543-11253609)
chr8 (8-69)||(24479238-24479299)
chr8 (8-69)||(38578372-38578433)
chr8 (1-69)||(4054287-4054355)
chr8 (1-69)||(34494639-34494707)
chr8 (13-69)||(34810654-34810710)
chr8 (11-69)||(4658273-4658332)
chr8 (3-69)||(25830248-25830315)
chr8 (3-69)||(35067162-35067229)
chr8 (12-69)||(1068608-1068666)
chr8 (8-69)||(3946242-3946304)
chr8 (4-69)||(12707151-12707217)
chr8 (8-69)||(34018810-34018872)
chr8 (1-63)||(36816617-36816679)
chr8 (8-69)||(40528750-40528812)
chr8 (1-69)||(2730961-2731030)
chr8 (9-69)||(12284278-12284339)
chr8 (8-69)||(13971127-13971188)
chr8 (9-69)||(22203224-22203284)
chr8 (9-69)||(23754715-23754776)
chr8 (8-64)||(33451570-33451627)
chr8 (2-69)||(22767134-22767201)
chr8 (2-69)||(28772125-28772193)
chr8 (1-53)||(34186625-34186677)
[»] chr2 (60 HSPs)
chr2 (3-69)||(44287443-44287509)
chr2 (1-69)||(18254210-18254278)
chr2 (1-69)||(41042256-41042324)
chr2 (1-69)||(6511253-6511321)
chr2 (1-69)||(9990693-9990761)
chr2 (3-69)||(9207592-9207658)
chr2 (1-69)||(9760019-9760088)
chr2 (8-69)||(42421906-42421967)
chr2 (1-69)||(3838881-3838949)
chr2 (1-69)||(19109094-19109162)
chr2 (5-68)||(26481094-26481158)
chr2 (8-72)||(41195583-41195647)
chr2 (1-68)||(9194244-9194311)
chr2 (8-69)||(14876959-14877021)
chr2 (8-69)||(4384057-4384118)
chr2 (8-69)||(22888829-22888890)
chr2 (8-68)||(8848703-8848763)
chr2 (9-69)||(27490739-27490799)
chr2 (13-68)||(9051933-9051988)
chr2 (9-67)||(2427986-2428044)
chr2 (3-69)||(5054612-5054677)
chr2 (35-69)||(9647146-9647180)
chr2 (12-69)||(37731211-37731269)
chr2 (8-69)||(38821368-38821430)
chr2 (3-69)||(43487381-43487447)
chr2 (8-65)||(37003617-37003674)
chr2 (9-69)||(7648394-7648454)
chr2 (1-69)||(42091505-42091573)
chr2 (2-69)||(43057066-43057134)
chr2 (11-69)||(8427554-8427613)
chr2 (9-71)||(14233727-14233790)
chr2 (3-69)||(14328383-14328450)
chr2 (35-66)||(19633295-19633326)
chr2 (35-66)||(19830196-19830227)
chr2 (3-69)||(28245730-28245797)
chr2 (3-69)||(40210070-40210137)
chr2 (11-69)||(40358122-40358181)
chr2 (11-69)||(1248688-1248746)
chr2 (31-69)||(2076571-2076609)
chr2 (4-69)||(6170632-6170698)
chr2 (8-69)||(6999075-6999137)
chr2 (8-69)||(7574437-7574499)
chr2 (31-65)||(13711203-13711237)
chr2 (4-69)||(13765402-13765468)
chr2 (8-69)||(14255304-14255366)
chr2 (8-69)||(14871849-14871911)
chr2 (3-68)||(31578437-31578503)
chr2 (10-68)||(36193734-36193792)
chr2 (3-68)||(37077792-37077858)
chr2 (3-68)||(43665625-43665690)
chr2 (9-69)||(6336254-6336315)
chr2 (9-69)||(7502436-7502497)
chr2 (11-68)||(13766320-13766377)
chr2 (3-69)||(17569706-17569774)
chr2 (33-69)||(18510677-18510714)
chr2 (1-69)||(30339995-30340063)
chr2 (8-69)||(34945098-34945159)
chr2 (1-69)||(17917391-17917459)
chr2 (37-65)||(36180651-36180679)
chr2 (2-69)||(36587470-36587537)
[»] chr5 (46 HSPs)
chr5 (1-69)||(18660761-18660829)
chr5 (1-69)||(22649662-22649730)
chr5 (1-69)||(28306133-28306201)
chr5 (1-69)||(5721818-5721886)
chr5 (1-69)||(33037522-33037590)
chr5 (1-68)||(19522004-19522071)
chr5 (1-69)||(1079953-1080021)
chr5 (1-69)||(26791245-26791313)
chr5 (8-69)||(32872905-32872967)
chr5 (8-69)||(1274360-1274421)
chr5 (8-69)||(1764226-1764287)
chr5 (2-69)||(611866-611934)
chr5 (9-69)||(7076577-7076637)
chr5 (2-69)||(13089783-13089851)
chr5 (1-69)||(18258794-18258862)
chr5 (11-69)||(31748338-31748397)
chr5 (1-68)||(36738951-36739018)
chr5 (3-69)||(40829416-40829483)
chr5 (1-67)||(5168187-5168253)
chr5 (8-69)||(11954433-11954495)
chr5 (11-69)||(15479471-15479529)
chr5 (8-69)||(17097809-17097871)
chr5 (10-69)||(1981892-1981951)
chr5 (3-69)||(4719652-4719719)
chr5 (34-69)||(7076427-7076462)
chr5 (3-69)||(21155989-21156056)
chr5 (3-69)||(22098257-22098324)
chr5 (3-69)||(35075578-35075645)
chr5 (8-69)||(6517714-6517776)
chr5 (3-69)||(6529021-6529087)
chr5 (3-68)||(7287192-7287258)
chr5 (8-69)||(8920080-8920142)
chr5 (3-68)||(13309885-13309951)
chr5 (35-69)||(14923085-14923119)
chr5 (8-69)||(18695320-18695382)
chr5 (8-69)||(42446298-42446360)
chr5 (8-69)||(43214066-43214128)
chr5 (9-69)||(19981994-19982055)
chr5 (3-69)||(20770132-20770200)
chr5 (9-69)||(39807722-39807783)
chr5 (9-69)||(1671544-1671604)
chr5 (3-68)||(7552968-7553029)
chr5 (33-65)||(10232644-10232676)
chr5 (37-65)||(35233351-35233379)
chr5 (1-69)||(35634837-35634905)
chr5 (11-70)||(41724190-41724250)
[»] chr4 (64 HSPs)
chr4 (1-69)||(10250516-10250584)
chr4 (1-69)||(36177908-36177976)
chr4 (1-69)||(37297051-37297119)
chr4 (1-69)||(26724970-26725038)
chr4 (1-69)||(5622460-5622528)
chr4 (1-69)||(23369333-23369401)
chr4 (1-69)||(27964989-27965057)
chr4 (9-69)||(39478437-39478497)
chr4 (1-69)||(46212972-46213040)
chr4 (1-69)||(46634102-46634170)
chr4 (3-69)||(43174986-43175052)
chr4 (3-69)||(50890076-50890142)
chr4 (1-69)||(37997258-37997324)
chr4 (8-69)||(39440486-39440547)
chr4 (1-69)||(2268508-2268576)
chr4 (1-69)||(29175229-29175297)
chr4 (1-69)||(40348796-40348864)
chr4 (9-69)||(45082983-45083043)
chr4 (1-69)||(51986044-51986112)
chr4 (1-67)||(26732229-26732295)
chr4 (8-69)||(51255748-51255810)
chr4 (8-69)||(56557735-56557797)
chr4 (1-69)||(38510772-38510841)
chr4 (8-69)||(55609173-55609234)
chr4 (2-69)||(5932765-5932833)
chr4 (9-69)||(29531615-29531674)
chr4 (1-69)||(38134355-38134423)
chr4 (13-69)||(50050640-50050696)
chr4 (11-69)||(14443200-14443259)
chr4 (3-69)||(31641568-31641632)
chr4 (3-68)||(34114120-34114185)
chr4 (8-69)||(42815406-42815468)
chr4 (8-69)||(193535-193596)
chr4 (8-68)||(38519796-38519857)
chr4 (1-58)||(53801758-53801815)
chr4 (1-69)||(27051087-27051155)
chr4 (1-69)||(53781838-53781905)
chr4 (3-69)||(1795984-1796051)
chr4 (3-69)||(7632464-7632531)
chr4 (3-69)||(30170022-30170089)
chr4 (3-69)||(56474766-56474833)
chr4 (8-69)||(2401612-2401674)
chr4 (8-69)||(18882982-18883044)
chr4 (12-69)||(32012898-32012956)
chr4 (8-69)||(32696796-32696858)
chr4 (3-68)||(37060320-37060386)
chr4 (11-69)||(44539738-44539796)
chr4 (8-69)||(336815-336876)
chr4 (16-69)||(26910205-26910257)
chr4 (3-69)||(28458379-28458447)
chr4 (24-65)||(36408099-36408140)
chr4 (24-65)||(36413222-36413263)
chr4 (3-68)||(38376494-38376559)
chr4 (8-68)||(42916653-42916714)
chr4 (21-65)||(5234366-5234410)
chr4 (37-65)||(6309388-6309416)
chr4 (1-69)||(9472514-9472582)
chr4 (3-63)||(17805460-17805520)
chr4 (2-69)||(20760257-20760325)
chr4 (2-69)||(20766648-20766716)
chr4 (2-69)||(25523200-25523267)
chr4 (13-69)||(26908096-26908151)
chr4 (10-69)||(51734642-51734702)
chr4 (9-68)||(52430880-52430940)
[»] chr1 (58 HSPs)
chr1 (3-68)||(30735296-30735361)
chr1 (1-69)||(37685333-37685401)
chr1 (1-69)||(37700117-37700185)
chr1 (8-69)||(8350204-8350265)
chr1 (1-69)||(15083051-15083119)
chr1 (1-69)||(33100810-33100878)
chr1 (1-69)||(45333572-45333640)
chr1 (3-69)||(49020406-49020473)
chr1 (1-69)||(649770-649839)
chr1 (8-69)||(27465065-27465126)
chr1 (8-69)||(50932308-50932369)
chr1 (1-69)||(3159378-3159446)
chr1 (1-69)||(23645413-23645481)
chr1 (1-69)||(31088183-31088251)
chr1 (3-69)||(9566963-9567030)
chr1 (8-69)||(48983675-48983737)
chr1 (8-69)||(35369702-35369763)
chr1 (9-65)||(6693167-6693223)
chr1 (1-69)||(37275034-37275102)
chr1 (1-69)||(37619546-37619614)
chr1 (2-69)||(47642608-47642676)
chr1 (2-69)||(48858825-48858893)
chr1 (2-69)||(2571637-2571703)
chr1 (14-69)||(3982045-3982100)
chr1 (1-68)||(29359642-29359709)
chr1 (1-68)||(40861261-40861328)
chr1 (3-69)||(47214210-47214277)
chr1 (8-69)||(4213074-4213136)
chr1 (8-69)||(32915079-32915141)
chr1 (3-69)||(45042263-45042329)
chr1 (15-69)||(50726263-50726317)
chr1 (4-69)||(52714904-52714970)
chr1 (3-67)||(2492417-2492482)
chr1 (1-69)||(12657224-12657292)
chr1 (3-69)||(740958-741025)
chr1 (3-69)||(1689393-1689460)
chr1 (3-69)||(7171238-7171305)
chr1 (3-69)||(9987953-9988020)
chr1 (3-69)||(17082745-17082812)
chr1 (8-70)||(32926260-32926323)
chr1 (3-69)||(34008182-34008249)
chr1 (3-69)||(51286369-51286436)
chr1 (3-69)||(52362484-52362551)
chr1 (8-69)||(10890053-10890115)
chr1 (8-69)||(13489664-13489726)
chr1 (8-69)||(15705069-15705131)
chr1 (12-69)||(27742619-27742677)
chr1 (8-69)||(35529387-35529449)
chr1 (16-65)||(49453603-49453653)
chr1 (8-69)||(50148948-50149010)
chr1 (1-69)||(15470057-15470126)
chr1 (17-69)||(19947757-19947810)
chr1 (9-69)||(24806230-24806291)
chr1 (11-68)||(26208244-26208301)
chr1 (1-69)||(44672031-44672099)
chr1 (3-67)||(47215731-47215796)
chr1 (1-49)||(3851180-3851228)
chr1 (9-69)||(26501488-26501548)
[»] chr7 (49 HSPs)
chr7 (1-69)||(30941388-30941456)
chr7 (1-69)||(44189311-44189379)
chr7 (1-69)||(44895573-44895641)
chr7 (2-69)||(13152595-13152662)
chr7 (8-69)||(43807820-43807881)
chr7 (1-69)||(2362666-2362734)
chr7 (13-69)||(40112967-40113023)
chr7 (8-69)||(12007193-12007255)
chr7 (3-68)||(24532945-24533011)
chr7 (2-68)||(24614318-24614384)
chr7 (8-69)||(47448828-47448890)
chr7 (3-69)||(23910253-23910320)
chr7 (13-68)||(32529867-32529922)
chr7 (3-69)||(41018665-41018732)
chr7 (8-69)||(22605361-22605423)
chr7 (8-69)||(32777714-32777776)
chr7 (8-69)||(37352112-37352174)
chr7 (1-63)||(38073204-38073266)
chr7 (9-63)||(43025348-43025402)
chr7 (35-69)||(43942651-43942685)
chr7 (32-69)||(25192916-25192953)
chr7 (13-69)||(30061283-30061340)
chr7 (8-69)||(31398126-31398187)
chr7 (1-69)||(38956619-38956685)
chr7 (9-69)||(22918450-22918510)
chr7 (8-69)||(29723934-29723997)
chr7 (1-69)||(41189544-41189612)
chr7 (3-69)||(10055634-10055701)
chr7 (3-69)||(34108857-34108924)
chr7 (3-69)||(34349030-34349096)
chr7 (12-69)||(2008869-2008927)
chr7 (11-68)||(31436422-31436479)
chr7 (3-69)||(32933550-32933615)
chr7 (8-69)||(37899325-37899387)
chr7 (31-69)||(38861098-38861136)
chr7 (3-69)||(39137155-39137221)
chr7 (8-69)||(44184566-44184628)
chr7 (3-61)||(47145075-47145133)
chr7 (32-68)||(33057382-33057419)
chr7 (8-68)||(37385241-37385301)
chr7 (9-69)||(42598216-42598277)
chr7 (21-65)||(7077648-7077692)
chr7 (16-67)||(8792493-8792545)
chr7 (13-69)||(11325900-11325955)
chr7 (10-69)||(22195139-22195199)
chr7 (3-69)||(26153648-26153713)
chr7 (2-69)||(34978298-34978366)
chr7 (10-69)||(43159584-43159644)
chr7 (1-68)||(45335865-45335932)
[»] chr6 (30 HSPs)
chr6 (1-69)||(25811839-25811907)
chr6 (1-69)||(34047389-34047457)
chr6 (3-69)||(5570336-5570402)
chr6 (8-69)||(14817934-14817995)
chr6 (3-69)||(22079566-22079632)
chr6 (3-69)||(26595351-26595417)
chr6 (1-69)||(32316929-32316997)
chr6 (2-69)||(8645311-8645378)
chr6 (8-69)||(8098605-8098664)
chr6 (8-69)||(34442070-34442132)
chr6 (3-68)||(5080570-5080635)
chr6 (1-69)||(552795-552863)
chr6 (21-69)||(1156723-1156771)
chr6 (1-69)||(31077795-31077863)
chr6 (9-69)||(31869069-31869129)
chr6 (3-69)||(17551381-17551448)
chr6 (15-69)||(276993-277047)
chr6 (5-69)||(17182101-17182166)
chr6 (2-69)||(8505775-8505843)
chr6 (21-65)||(32253913-32253957)
chr6 (8-69)||(2242029-2242091)
chr6 (3-69)||(5694154-5694220)
chr6 (8-69)||(11635542-11635604)
chr6 (12-69)||(18065101-18065159)
chr6 (8-69)||(20822875-20822937)
chr6 (12-69)||(33712322-33712380)
chr6 (8-69)||(35213568-35213630)
chr6 (9-65)||(5739772-5739829)
chr6 (9-69)||(14094701-14094761)
chr6 (1-68)||(21506339-21506406)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-69)||(49297-49365)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-69)||(76620-76688)
[»] scaffold0199 (1 HSPs)
scaffold0199 (9-68)||(8671-8730)
[»] scaffold0432 (1 HSPs)
scaffold0432 (8-69)||(6527-6589)
[»] scaffold0067 (1 HSPs)
scaffold0067 (31-69)||(35525-35563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (8-69)||(101913-101975)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-69)||(366296-366362)
[»] scaffold0128 (1 HSPs)
scaffold0128 (2-69)||(10938-11006)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-69)||(10964-11032)
scaffold0041 (3-68)||(34411-34476)
[»] scaffold0519 (1 HSPs)
scaffold0519 (11-69)||(11785-11841)
[»] scaffold0027 (1 HSPs)
scaffold0027 (3-64)||(121642-121704)


Alignment Details
Target: chr3 (Bit Score: 313; Significance: 1e-176; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 385
Target Start/End: Complemental strand, 33939306 - 33938922
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttcaaacagtacatggttaaggaggtcagacata 100  Q
    |||||| |||| ||||||||| ||| ||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33939306 agataatgtgaatatgagagagaaagttgtcacaaaaattataaaaaatggttgttcaaatatcatttcaaacagtacatggttaaggaggtcagacata 33939207  T
Q  101 gaaaattttaacnnnnnnnnnnnngtaaagttaaacattctttagtacggcaaattaaggaacacgcgttagactcttatttggccgcaagcctaatttt 200  Q
    ||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33939206 gaaaattttaacttttttatttttataaagttaaacattctttagtacggcaaattaaggaacacgcgttagactcttatttggccgcaagcctaatttt 33939107  T
Q  201 gtcacaacttttccaacacggatgcaaaatcagttaacagtttccattattggtcgacctaattaattaatatcgtgacacctaacatatattccgtggc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33939106 gtcacaacttttccaacacggatgcaaaatcagttaacagtttccattattggtcgacctaattaattaatatcgtgacacctaacatatattccgtggc 33939007  T
Q  301 atccatatgctattttaatttggaacggaacattccaagcaacttcttattagtgtgtaggagttttatttatcccagttactcc 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33939006 atccatatgctattttaatttggaacggaacattccaagcaacttcttattagtgtgtaggagttttatttatcccagttactcc 33938922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45711440 - 45711509
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttca 70  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  45711440 agataatgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaattgttgttcaaatatcatttca 45711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20547991 - 20548059
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| |  ||||||||||||||||||    
T  20547991 agataacgtgagtatgagagagaaaattgtcacaaaagttgtaaaaactgattgttcaaatatcatttc 20548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26014882 - 26014814
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  26014882 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 26014814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27541503 - 27541571
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  27541503 agataatgtgagtatgagagagaaaattgtcactaaagttgtaaaaaatggttgttcaaatatcatttc 27541571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36671015 - 36671083
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||    
T  36671015 agataatgtgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatggttgttcaaatatcatttc 36671083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41505561 - 41505494
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  41505561 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaataattgttcaaatatcattt 41505494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 6178428 - 6178494
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||    
T  6178428 ataatgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatagttgtacaaatatcatttc 6178494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38926698 - 38926630
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||| |||||||||||| |||||||||||||||||||    
T  38926698 agataatgtgagtatgagagagaaagttgtcacaaacgttgtaaaaaatggttgttcaaatatcatttc 38926630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44413921 - 44413989
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||| ||||||||||    
T  44413921 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaattgttgttcatatatcatttc 44413989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 47472391 - 47472331
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  47472391 tgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 47472331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 5244297 - 5244231
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||||||| || |||||||||||||||||||    
T  5244297 ataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaatatggttgttcaaatatcatttc 5244231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7668188 - 7668256
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||| ||||| ||||||| || ||||||||||||||||  ||||||||||||||||||    
T  7668188 agataatgtgagtataagagagaaaattgtcaaaaaagttgtaaaaaatgattgttcaaatatcatttc 7668256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 41308987 - 41308927
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| |||||||||| |||||||| |||||||||||||||||||    
T  41308987 tgagtatgagagagaaagttgtcacaaaagttataaaaaatggttgttcaaatatcatttc 41308927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 46623977 - 46623909
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||| ||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  46623977 agataatgtgaatatcagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 46623909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 52326089 - 52326021
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||| |||||||| ||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  52326089 agataatgtgagcatgagagagaaagttgtcacaaaagttgtaaaaaatggttattcaaatatcatttc 52326021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 50559222 - 50559281
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  50559222 agtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttc 50559281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42357090 - 42357149
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  42357090 gtgagtatgagagaaag--ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 42357149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 44813202 - 44813136
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| |||  || ||||||| |||||||||||||||||| ||||||||||||    
T  44813202 ataatgtgagtatgagagagaaagctgtcacaaaaattgtaaaaaatagttgtttaaatatcatttc 44813136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 52939714 - 52939655
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  52939714 gtgagtatgagagaaag--ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 52939655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 7933982 - 7933921
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatat 63  Q
    ||||| || ||||||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  7933982 gataatgtaagtatgagagagaaaattatcacaaaagttgtaaaaaatagttgtttaaatat 7933921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 16479695 - 16479634
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||| ||||| ||||| |||||||||||||    
T  16479695 gtgagtatgagagagaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttc 16479634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 37302609 - 37302548
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||| ||| ||| ||||||||||||||||||| |||||| ||||||||||||    
T  37302609 gtgaatatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttaaaatatcatttc 37302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 38671681 - 38671620
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| |||||| ||||||| ||||||| || |||||||| |||||||||||||||||||    
T  38671681 gtgagtacgagagagaaaattgtcacaaaaattataaaaaatggttgttcaaatatcatttc 38671620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 44856016 - 44855955
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| || ||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  44856016 gtgagtatgagtgagaaagttgtcacaaaagttgtaaaaaattgttattcaaatatcatttc 44855955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 52963328 - 52963385
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||    
T  52963328 tatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttc 52963385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5114148 - 5114080
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||| ||||||| ||| ||| || |||| ||||||||||| |||||||||||||||||||    
T  5114148 agataatgtgagtgtgagagagaaagttgtcaaaaaaattgtaaaaaatggttgttcaaatatcatttc 5114080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16969567 - 16969635
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || ||||||||| |||||| |||||| ||||||||||||    
T  16969567 agataatgtgagtatgagagagaaagttgtcaaaaaagttgtcaaaaatggttgttaaaatatcatttc 16969635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17118467 - 17118400
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcattt 68  Q
    |||||| ||||||||||||||||||||||  |||||||||||| |||||| ||||| ||||||||||||    
T  17118467 agataatgtgagtatgagagaaaaaattg-tacaaaagttgtacaaaaatggttgtacaaatatcattt 17118400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 28539749 - 28539809
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||||||||||    
T  28539749 tgagtgtgagaaagaaaattgtcacaaaaattataaaaaatagttgttcaaatatcatttc 28539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 55151717 - 55151785
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| | |||||||||||| ||||||  || ||||||||| |||||| |||||||||||||||||||    
T  55151717 agataatgagagtatgagagataaaattatcataaaagttgtcaaaaatggttgttcaaatatcatttc 55151785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 288794 - 288727
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||| | ||||||| |||||||||||||||||||    
T  288794 ataatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcatttc 288727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14207260 - 14207327
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| || ||||| |||||||||||||||||||    
T  14207260 ataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttc 14207327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 14215008 - 14215075
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| || ||||| |||||||||||||||||||    
T  14215008 ataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttc 14215075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 45293031 - 45293098
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| | ||||||||||||| ||||||||||||    
T  45293031 ataatgtgagtatgagagagaaagttgtcacaaaagttgtttaaaaatagttgtttaaatatcatttc 45293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 49417644 - 49417577
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| | ||||||| |||||||||||||||||    
T  49417644 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 49417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 52254148 - 52254207
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| ||| ||| || |||||||||||| ||| |||||||||||||||||||    
T  52254148 gagtatgagagagaaagttgtcataaaagttgtaaacaatggttgttcaaatatcatttc 52254207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 10811199 - 10811137
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| |||||||||||||||||||    
T  10811199 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttc 10811137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16129592 - 16129526
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatt 67  Q
    ||||||| ||||||| | ||| ||| ||  ||||||||||||||||||| |||||||||||||||||    
T  16129592 agataacatgagtataatagagaaagttatcacaaaagttgtaaaaaatggttgttcaaatatcatt 16129526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 25641573 - 25641639
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| |||   |||||||||| ||||||| ||||||||||||||||||    
T  25641573 ataatgtgagtatgagagacaaagttgtagcaaaagttgtcaaaaataattgttcaaatatcatttc 25641639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 31931028 - 31931086
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatt 67  Q
    |||||||||||| ||||||| ||||||||||| |||||||| | |||||||||||||||    
T  31931028 gagtatgagagagaaaattgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 31931086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 35597230 - 35597164
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||| ||| |||||||||||  ||||||||||||||||||    
T  35597230 ataatgtgagtatgagagagaaagttgtcactaaaattgtaaaaaatgtttgttcaaatatcatttc 35597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 39629841 - 39629906
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatt 67  Q
    |||| |||||||||||||| ||  ||| |||||||||||| ||||||||||||| |||||||||||    
T  39629841 ataatgtgagtatgagagagaaggttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatt 39629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 40367671 - 40367610
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||||||| ||||||| ||||  |||||||||| |||||||||||||||    
T  40367671 tgagtatgagagagaaaattgtcacaaaaattgtttaaaaatagttattcaaatatcatttc 40367610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 13735191 - 13735131
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| | ||| ||| ||||||| ||||||||||| ||||||||||||| |||||    
T  13735191 tgagtatgagaaagaaagttgtcacaaaaattgtaaaaaatggttgttcaaatattatttc 13735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42358639 - 42358707
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||| |||| |||||| |||||||  ||||||||||    
T  42358639 agataatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaatggttgttcgtatatcatttc 42358707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7934045 - 7933998
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaa 48  Q
    |||||| |||||||||||||| ||||||  ||||||||||||||||||    
T  7934045 agataatgtgagtatgagagagaaaattatcacaaaagttgtaaaaaa 7933998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 8846560 - 8846493
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| ||||||||||| ||   ||||| |||||||||||||||||    
T  8846560 ataatgtgagtatgagagagaaaattgtcacaaaagttgttatcgaatagatgttcaaatatcatttc 8846493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31157678 - 31157733
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgtt 56  Q
    |||||| |||||||| ||||||||||||| ||||||| || ||||||||| |||||    
T  31157678 agataatgtgagtataagagaaaaaattgtcacaaaaattataaaaaataattgtt 31157733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 32146016 - 32146055
Alignment:
Q  31 cacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  32146016 cacaaaagttgtcaaaaaatagttgttcaaatatcatttc 32146055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 43158283 - 43158334
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatat 63  Q
    ||||||||||||||||| ||||| |||||| |||||||| ||||||||||||    
T  43158283 tatgagagaaaaaattgtcacaatagttgtcaaaaaataattgttcaaatat 43158334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 51137050 - 51137105
Alignment:
Q  15 tgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||| |||||||||| | ||||||||||||| |||||||||||||    
T  51137050 tgagagaaaaagttgtcacaaaagttattaaaaaatagttgtacaaatatcatttc 51137105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 25188472 - 25188534
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| |||||| ||| |||   |||||||||| |||||||||||||||||||||||||||    
T  25188472 gtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttc 25188534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 29573363 - 29573425
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  29573363 gtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttc 29573425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 32362993 - 32362935
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| || ||||||||| ||||||| |||||||||||||||||||    
T  32362993 gtatgagagataaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttc 32362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 34057956 - 34058022
Alignment:
Q  4 taacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||| ||| ||| |||||||||| | | ||||| | |||||||||||||||||    
T  34057956 taacgtgagtatgagagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttc 34058022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 37894250 - 37894312
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  37894250 gtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 37894312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 42672837 - 42672903
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||| ||||||||||||| ||| ||||||| || | ||||||||||||| ||||||||||||    
T  42672837 ataatgtgaatatgagagaaaaatttgtcacaaaaattatcaaaaaatagttgtgcaaatatcattt 42672903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 46019526 - 46019464
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||   ||||||| |||||||||||||||||    
T  46019526 gtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 46019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47988486 - 47988555
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttca 70  Q
    |||||| |||||||||||||| ||| ||| || ||||||||| | ||||||||||| ||||||||||||||    
T  47988486 agataatgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatagttgtacaaatatcatttca 47988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47997773 - 47997842
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttca 70  Q
    |||||| |||||||||||||| ||| ||| || ||||||||| | ||||||||||| ||||||||||||||    
T  47997773 agataatgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatagttgtacaaatatcatttca 47997842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48007060 - 48007129
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttca 70  Q
    |||||| |||||||||||||| ||| ||| || ||||||||| | ||||||||||| ||||||||||||||    
T  48007060 agataatgtgagtatgagagagaaagttgtca-aaaagttgttagaaaatagttgtacaaatatcatttca 48007129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 55400063 - 55400001
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  55400063 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 55400001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 9862592 - 9862535
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||| ||| |||||||||||  ||||||| |||||||||||||||||||    
T  9862592 tatgagagagaaagttgtcacaaaagttgacaaaaaatggttgttcaaatatcatttc 9862535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 27168690 - 27168751
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||| || | ||||||| |||||||||||||||||||    
T  27168690 tgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttc 27168751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31017395 - 31017463
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||| ||||||| || |||||||| || |||||  |||| |||||||||||||    
T  31017395 agataacgtgagtatgagagagaaaattgtca-aaaagttgttagaaaatgattgtacaaatatcatttc 31017463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 48353059 - 48352998
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||| | ||| |||||||||||||    
T  48353059 tgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcatttc 48352998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 51032625 - 51032693
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| || |||||||| || ||||| ||||| |||||||||||||    
T  51032625 agataatgtgagtatgagagagaaaattgtca-aaaagttgttagaaaatggttgtacaaatatcatttc 51032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51343479 - 51343414
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatca 65  Q
    |||||| || ||||||||||| ||||||| |||||||||||| |  |||||| |||||||||||||    
T  51343479 agataatgtaagtatgagagagaaaattgtcacaaaagttgtcatcaaatagatgttcaaatatca 51343414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 38471710 - 38471643
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttca 70  Q
    |||| |||||||||||||| |||||||  ||||||||||||  ||||| ||||| ||||||||||||||    
T  38471710 ataatgtgagtatgagagagaaaattg-tacaaaagttgtaccaaaatggttgtacaaatatcatttca 38471643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 43333593 - 43333565
Alignment:
Q  37 agttgtaaaaaatagttgttcaaatatca 65  Q
    |||||||||||||||||||||||||||||    
T  43333593 agttgtaaaaaatagttgttcaaatatca 43333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31249525 - 31249593
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  31249525 agataatgtgagtatgagagaaaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 31249593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22719510 - 22719442
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  22719510 agataatgtgagcatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 22719442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37449426 - 37449494
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||    
T  37449426 agataatgtgagtatgagagaaaaagttgtcacaaaagttgtaaaaaatggttgttgaaatatcatttc 37449494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 5600994 - 5601056
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  5600994 gtgagtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 5601056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 5639626 - 5639564
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  5639626 gtgagtatgagagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 5639564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 27325821 - 27325760
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  27325821 gtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 27325760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 42768274 - 42768209
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||    
T  42768274 ataatgtgagtatgagagaaaaagttgtcacaaa-gttgtaaaaaataattgttcaaatatcatttc 42768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43397849 - 43397783
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| |||  |||||||||||||||||| |||||||||||||||||||    
T  43397849 ataatgtgagtatgagagagaaagttgtaacaaaagttgtaaaaaatggttgttcaaatatcatttc 43397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 25987788 - 25987856
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  25987788 gataatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttc 25987856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 6440150 - 6440083
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaa-aaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||||||| |||||||||| |||||||||||||    
T  6440150 ataatgtgagtatgagagagaaagttgtcacaaaagttgtaaagaaatagttgtacaaatatcatttc 6440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 32501199 - 32501265
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| |||||||  | ||||||||||||||||  ||||||||||||||||||    
T  32501199 ataatgtgagtatgagagagaaaattgttaaaaaagttgtaaaaaatgattgttcaaatatcatttc 32501265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 45405991 - 45406053
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||  ||||||| || | |||||||||||||||||||||||||||    
T  45405991 gtgagtatgagagaaaaaattatcacaaaaattattaaaaaatagttgttcaaatatcatttc 45406053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 7271915 - 7271854
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||  ||||||||||||||||||    
T  7271915 gtgagtatgagagataaagttgtcacaaaagttgttaaaaattattgttcaaatatcatttc 7271854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44825511 - 44825446
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||| ||||||| |||||||||||| ||||||  |||||||| ||||||||    
T  44825511 ataatgtgagtatgagagataaaattgtcacaaaagttgtcaaaaatgattgttcaattatcattt 44825446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10692509 - 10692441
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||| || ||||||||  ||||||||||||||||||    
T  10692509 agataatgtgagtatgagagataaagttgtcacaaaaattataaaaaatgattgttcaaatatcatttc 10692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12898930 - 12898998
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||| ||||||| || |||||||| ||| ||||||||| |||||    
T  12898930 agataatgtgagtatgagagaaaaagttgtcacaaaatttataaaaaatggttattcaaatatgatttc 12898998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 26026966 - 26026898
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||| | ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  26026966 gataatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 26026898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 44061787 - 44061719
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||| | ||||||| |||||||||||||||||||    
T  44061787 gataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 44061719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7598777 - 7598710
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| | | |||||||||||| ||||||| |||||||||||||||||||    
T  7598777 ataatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 7598710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 9549201 - 9549267
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||| ||||||| |||||||||||| | ||||| | ||||||||||||||||    
T  9549201 ataatgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcattt 9549267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 18651434 - 18651372
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||||||| ||||||||||| ||  |||||| |||||||||||||||||    
T  18651434 gtgagtatgagagagaaaattgtcacaaaagttgttaccaaatagatgttcaaatatcatttc 18651372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 33100476 - 33100538
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| || ||||| |||||||||||||||||||    
T  33100476 gtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttc 33100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 34435748 - 34435806
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||||||||||||||    
T  34435748 gtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 34435806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43715943 - 43715877
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||| || ||||| ||||| |||||||||||||    
T  43715943 ataatgtgagtatgagagagaaagttgtcacaaaagttttagaaaatggttgtacaaatatcatttc 43715877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11253543 - 11253609
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||||| ||| ||| ||||||  ||||||||||| |||||||||||||||||||    
T  11253543 agataatgtaagtatgagagagaaagttgtcacaaa--ttgtaaaaaatggttgttcaaatatcatttc 11253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 24479299 - 24479238
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| | | ||||||| |||||||||| | |||||| |||||||||||||||||||    
T  24479299 gtgagtatgaaaaagaaaattgtcacaaaagttatcaaaaatggttgttcaaatatcatttc 24479238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 38578372 - 38578433
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| ||  ||||||| |||||||||||| ||||||||||||||||||    
T  38578372 gtgagtatgaaagataaagttatcacaaaaattgtaaaaaataattgttcaaatatcatttc 38578433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 4054287 - 4054355
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||||| ||| ||| ||  |||| |||||||||||||| |||||||||||||||||||    
T  4054287 agataatgtgaatatgaaagataaagttatcacagaagttgtaaaaaatggttgttcaaatatcatttc 4054355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34494639 - 34494707
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||| ||||||  || |||| |  || ||||||||||| |||||||||||||    
T  34494639 agataacgtgagtatgagagagaaaattttcaaaaaattgttagaaaatagttgtacaaatatcatttc 34494707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 34810654 - 34810710
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||| ||  ||||| ||||||||||||| |||||||||||||||||||    
T  34810654 tatgagagataaagttatcacaagagttgtaaaaaatggttgttcaaatatcatttc 34810710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 4658273 - 4658332
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  4658273 agtatgagagaaaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 4658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 25830248 - 25830315
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  25830248 ataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 25830315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 35067229 - 35067162
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| ||| |||| ||||| |||||||||||||    
T  35067229 ataatgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttc 35067162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 1068666 - 1068608
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  1068666 gtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 1068608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 3946304 - 3946242
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  3946304 gtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 3946242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12707217 - 12707151
Alignment:
Q  4 taacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||| ||| ||| | |||||||||| | ||||| | |||||||||||||||||    
T  12707217 taacgtgagtatgagagagaaagttgtcgcaaaagttgtcataaaatggatgttcaaatatcatttc 12707151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 34018872 - 34018810
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| |||||||   |||||||||| | ||||| |||||||||||||||||||    
T  34018872 gtgagtatgagagagaaaattgttgcaaaagttgtcagaaaatggttgttcaaatatcatttc 34018810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36816617 - 36816679
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatat 63  Q
    |||||| |||||||||| ||| || |||| |||||||||||| |||||| |||||||| ||||    
T  36816617 agataatgtgagtatgatagagaagattgtcacaaaagttgtcaaaaatggttgttcatatat 36816679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 40528812 - 40528750
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| ||| || ||||||||| | |||||||||||||||||||||||||    
T  40528812 gtgagtatgaaagagaaagttgtcataaaagttgtcacaaaatagttgttcaaatatcatttc 40528750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2730961 - 2731030
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||||||||| ||| |||  ||||||||||| ||||| | |||||||||||||||||||    
T  2730961 agataatgtgaatatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatcatttc 2731030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 12284278 - 12284339
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| |||||| |||||  |||||| |||||||||||||||||||    
T  12284278 tgagtatgagagagaaagttgtcacaaacgttgtccaaaaatggttgttcaaatatcatttc 12284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 13971188 - 13971127
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| |||||| ||| ||| |||||||||||||  |||| | |||||||||||||||||    
T  13971188 gtgagtacgagagagaaagttgtcacaaaagttgtatgaaatggatgttcaaatatcatttc 13971127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 22203224 - 22203284
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||| ||||  |||||||||||| |||||| ||||| |||||||||||||    
T  22203224 tgagtatgagagaaaatattgt-acaaaagttgtacaaaaatggttgtacaaatatcatttc 22203284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 23754715 - 23754776
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||| ||| ||| |||||||||| | ||||||| |||||||||||||||||||    
T  23754715 tgagtatgaaagagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcatttc 23754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 33451570 - 33451627
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatc 64  Q
    |||||||||||||| ||| ||| |||||||||||| |||||||  |||||||||||||    
T  33451570 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatc 33451627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 22767201 - 22767134
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||||||| || ||||||||| | ||||| ||||| |||||||||||||    
T  22767201 gataatgtgagtatgagagagaaaattgtca-aaaagttgtgagaaaatggttgtacaaatatcatttc 22767134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 28772125 - 28772193
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| ||| |||||||||| ||| ||  ||||||| |||| ||||||| |||||||||||||||||||    
T  28772125 gataaagtgggtatgagagagaaagttatcacaaaaattgtcaaaaaatggttgttcaaatatcatttc 28772193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34186677 - 34186625
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagtt 53  Q
    |||||| |||||||| | ||| ||| ||| |||||||||||||||||||||||    
T  34186677 agataatgtgagtataaaagagaaagttgtcacaaaagttgtaaaaaatagtt 34186625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 44287443 - 44287509
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  44287443 ataatgtgagtatgagagaaaaaattatcacaaaagttgtaaaaaatagttgttcaaatatcatttc 44287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18254210 - 18254278
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  18254210 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 18254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41042324 - 41042256
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  41042324 agataatgtgagtatgagagaaaaagttgtcacaaaagttgttaaaaatggttgttcaaatatcatttc 41042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6511321 - 6511253
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||| ||||||||||||||| |||||||||||||||||||    
T  6511321 agataatgtgagtatgagagagaaagttgtcactaaagttgtaaaaaatggttgttcaaatatcatttc 6511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9990761 - 9990693
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||| ||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  9990761 agataatgtgagtataagagagaaagttgtcacaaaagttgtaaaaattagttgttcaaatatcatttc 9990693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9207658 - 9207592
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    
T  9207658 ataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttc 9207592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9760088 - 9760019
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaa-gttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||    
T  9760088 agataatgtgagtatgagagagaaagttgtcacaaaaagttgtaaaaaatggttgttcaaatatcatttc 9760019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42421906 - 42421967
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| || ||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  42421906 gtgagtatgagtgacaaaattgtcacaaaagttgtaaaaaatggttgttcgaatatcatttc 42421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3838881 - 3838949
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||| ||| ||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  3838881 agataatgtgaatataagaaaaaaaattatcacaaaagttgtaaaaaataattgttcaaatatcatttc 3838949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19109094 - 19109162
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||||||    
T  19109094 agataatgtaagtatgagagagaaatttatcacaaaaattgtaaaaaatagttgttcaaatatcatttc 19109162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 26481094 - 26481158
Alignment:
Q  5 aacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcattt 68  Q
    ||||||||||||||| | ||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  26481094 aacgtgagtatgagaaagaaaattgtcacaaaagttgttaaaaaataattgttcaaatatcattt 26481158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 41195647 - 41195583
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttcaaa 72  Q
    |||||||||||||| ||||||| |||||||||||| ||||||  || ||||||||||||||||||    
T  41195647 gtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatgattattcaaatatcatttcaaa 41195583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9194311 - 9194244
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| |||  || ||||||| ||||||||||||||||| ||||||||||||    
T  9194311 agataatgtgagtatgagagagaaagatgtcacaaaaattgtaaaaaatagttgtccaaatatcattt 9194244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 14877021 - 14876959
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| |||||||||||||||| ||||||||||    
T  14877021 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatagttgttcacatatcatttc 14876959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 4384118 - 4384057
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| ||||| ||||||| |||||||||||||||||    
T  4384118 gtgagtatgagagagaaagttgtcacaaaaattgtacaaaatagatgttcaaatatcatttc 4384057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 22888829 - 22888890
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| |||| |||||| |||||||||||||||||||    
T  22888829 gtgagtatgagagagaaagttgtcacaaaaattgtcaaaaatggttgttcaaatatcatttc 22888890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 8848703 - 8848763
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| ||||||| ||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  8848703 gtgagtgtgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcattt 8848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 27490739 - 27490799
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||| ||||||| ||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  27490739 tgagtgtgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcatttc 27490799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 9051988 - 9051933
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||| ||||||||||| |||||||||||| ||||||| |||| ||||||||||||    
T  9051988 tatgaaagaaaaaattgtcacaaaagttgtcaaaaataattgtacaaatatcattt 9051933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 2427986 - 2428044
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatt 67  Q
    ||||||||||||||||| ||| || ||| ||||| ||||||| ||||||||||||||||    
T  2427986 tgagtatgagagaaaaagttgtcataaacgttgtcaaaaataattgttcaaatatcatt 2428044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 5054677 - 5054612
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||| ||| |||||||||| ||||||| |  |||||||||||||||||    
T  5054677 ataatgtgagtatgagagaaaaagttgtcacaaaagttataaaaaa-aaatgttcaaatatcatttc 5054612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 9647180 - 9647146
Alignment:
Q  35 aaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||||||||||||||||    
T  9647180 aaagttgtaaaaaatagttgttcaaatatcatttc 9647146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 37731211 - 37731269
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||||||||||||||    
T  37731211 gtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 37731269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 38821430 - 38821368
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| | ||||||| |||||||||||| | ||||| |||||||||||||||||||    
T  38821430 gtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatggttgttcaaatatcatttc 38821368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43487447 - 43487381
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||| |||||||| ||| ||| ||||||| || |||||||| |||||||||||||||||||    
T  43487447 ataatgtgagcatgagagagaaagttgtcacaaaaattataaaaaatggttgttcaaatatcatttc 43487381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 37003674 - 37003617
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    |||||||||||||| ||| ||| ||||||| |  ||||||||||||||||||||||||    
T  37003674 gtgagtatgagagagaaagttgtcacaaaaatattaaaaaatagttgttcaaatatca 37003617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 7648454 - 7648394
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||| ||| ||||||| |||| | |||| | |||||||||||||||||    
T  7648454 tgagtatgagagaaaaagttgtcacaaaaattgtcacaaatggatgttcaaatatcatttc 7648394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42091505 - 42091573
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||| ||||| ||| ||| ||  |||||||||||||||||||||| |||||| |||||    
T  42091505 agataatgtgagtataagagagaaagttgtcattaaagttgtaaaaaatagttgttgaaatataatttc 42091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 43057134 - 43057066
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||| ||||| ||| ||| ||||||||||| |||||| | |||||||||||||||||||    
T  43057134 gataatgtgagtataagagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcatttc 43057066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 8427613 - 8427554
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||| ||| ||||||| |||| ||||||||| |||||||||||||||||    
T  8427613 agtatgagagagaaagttgtcacaaaaattgtcaaaaaatagatgttcaaatatcatttc 8427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 14233727 - 14233790
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttcaa 71  Q
    ||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||||    
T  14233727 tgagtatgagagagaaatttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttcaa 14233790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 14328450 - 14328383
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||| ||| ||||||||||| || ||||| ||||| || ||||||||||    
T  14328450 ataatgtgagtatgagagaaaaagttgtcacaaaagttgttagaaaattgttgtacatatatcatttc 14328383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 19633326 - 19633295
Alignment:
Q  35 aaagttgtaaaaaatagttgttcaaatatcat 66  Q
    ||||||||||||||||||||||||||||||||    
T  19633326 aaagttgtaaaaaatagttgttcaaatatcat 19633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 19830227 - 19830196
Alignment:
Q  35 aaagttgtaaaaaatagttgttcaaatatcat 66  Q
    ||||||||||||||||||||||||||||||||    
T  19830227 aaagttgtaaaaaatagttgttcaaatatcat 19830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 28245797 - 28245730
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||||   ||||||| |||||||||||||||||    
T  28245797 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 28245730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 40210070 - 40210137
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||| || |  ||||||||||||||||||||||||||    
T  40210070 ataatgtgagtatgagagagaaagttgtcacaaaaattatttaaaaatagttgttcaaatatcatttc 40210137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 40358122 - 40358181
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagtt-gtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||||  ||||||||||||    
T  40358122 agtatgagagaaaaaattgtcacaaaaattattaaaaaatagttgtagaaatatcatttc 40358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 1248746 - 1248688
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| | ||| ||| || |||||||||||||||| ||||||||||||| |||||    
T  1248746 agtatgagaaagaaagttgtcataaaagttgtaaaaaatggttgttcaaatattatttc 1248688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 2076609 - 2076571
Alignment:
Q  31 cacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2076609 cacaaaagttgtaaaaaatggttgttcaaatatcgtttc 2076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 6170698 - 6170632
Alignment:
Q  4 taacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||| ||| ||| |||||||||||| | ||||| | |||| ||||||||||||    
T  6170698 taacgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttgaaatatcatttc 6170632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 6999075 - 6999137
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  6999075 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 6999137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 7574499 - 7574437
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||||||| ||| | |||||||||||  ||||||| |||||||||||||||||    
T  7574499 gtgagtatgaaagaaaaagttgtctcaaaagttgtagcaaaatagatgttcaaatatcatttc 7574437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 13711203 - 13711237
Alignment:
Q  31 cacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||||||| |||||||||||||||||||||    
T  13711203 cacaaaagttgtacaaaatagttgttcaaatatca 13711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 13765468 - 13765402
Alignment:
Q  4 taacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  13765468 taacatgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 13765402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 14255366 - 14255304
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| |||| ||||||| |||||||||||| | ||||||||||| ||||||| |||||    
T  14255366 gtgagtatgtgagagaaaattgtcacaaaagttgtcataaaatagttgtacaaatattatttc 14255304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 14871911 - 14871849
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| |||  || |||||||||||| ||||||| |||||||| ||||||||||    
T  14871911 gtgagtatgagagagaaagctgtcacaaaagttgtcaaaaaatggttgttcacatatcatttc 14871849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31578503 - 31578437
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||||||| ||| |||||||  |||  |||||||||| ||||||||||||||    
T  31578503 ataatgtgagtatgagagaaaaagttgtcacaaaaactgtctaaaaatagttattcaaatatcattt 31578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 36193734 - 36193792
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||||||||| ||| ||| |||  ||||||| |||||| ||||||||||||||||||    
T  36193734 gagtatgagagagaaagttgtcaccgaagttgttaaaaatggttgttcaaatatcattt 36193792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37077858 - 37077792
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||| ||| |||||||  |||||| || | ||||||||||||||||||||||||||    
T  37077858 ataatgtgagtatgaaagataaaattgttacaaaaattatcaaaaaatagttgttcaaatatcattt 37077792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43665690 - 43665625
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||||||||||| || |||||||| |||||| | ||||| ||||||||||||    
T  43665690 ataatgtgagtatgagagaaaaaattgtca-aaaagttgttaaaaagtggttgtacaaatatcattt 43665625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 6336315 - 6336254
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  6336315 tgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 6336254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 7502436 - 7502497
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||| |||| ||||||| ||||| |||||||||||||    
T  7502436 tgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatttc 7502497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 13766320 - 13766377
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||||| ||||||| ||| |||||||||| |||||||| |||||  |||||||||||    
T  13766320 agtatgaaagaaaaagttgtcacaaaagttataaaaaatggttgtataaatatcattt 13766377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17569706 - 17569774
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt--aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||||||||||| ||||  ||||||||| |  |||||||  ||||||||||||||||||    
T  17569706 ataatgtgagtatgagagaaaatattgttacaaaagttatcaaaaaaattattgttcaaatatcatttc 17569774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 18510714 - 18510677
Alignment:
Q  33 caaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18510714 caaaagttgtcaaaaaatagttgttcaaatatcatttc 18510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30340063 - 30339995
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| |||  |||||||||||| |||||| ||||| |||||||||||||    
T  30340063 agataatgtgagtatgagagagaaagttgt-acaaaagttgtacaaaaatggttgtacaaatatcatttc 30339995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 34945098 - 34945159
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| || |||| || ||||||||  ||||||||||||||||||    
T  34945098 gtgagtatgagagagaaagttgtcataaaaattataaaaaatgattgttcaaatatcatttc 34945159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17917459 - 17917391
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||  || |||| |  ||||||||| |||| |||||||||||||    
T  17917459 agataatgtgagtatgagagagaaaattatcaaaaaattgttaaaaaataattgtacaaatatcatttc 17917391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 36180651 - 36180679
Alignment:
Q  37 agttgtaaaaaatagttgttcaaatatca 65  Q
    |||||||||||||||||||||||||||||    
T  36180651 agttgtaaaaaatagttgttcaaatatca 36180679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 36587470 - 36587537
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| || |||| |||| ||||||| |||||||||||||||||||    
T  36587470 gataatgtgagtatgagagagaaagttgtca-aaaaattgtcaaaaaatggttgttcaaatatcatttc 36587537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18660829 - 18660761
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||||||||    
T  18660829 agataacgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaatggttgttcaaatatcatttc 18660761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22649662 - 22649730
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  22649662 agataatgtgagtatgagagagaaaattgtcacaaaaattgtaaaaaatggttgttcaaatatcatttc 22649730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28306133 - 28306201
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  28306133 agataatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 28306201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5721818 - 5721886
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  5721818 agataatgtcagtatgagagataaagttgtcacaaaaattgtaaaaaatagttgttcaaatatcatttc 5721886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33037590 - 33037522
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || |||||||||||||||| |||||||||||||||||||    
T  33037590 agataatgtgagtatgagagagaaagttgtcataaaagttgtaaaaaatggttgttcaaatatcatttc 33037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19522004 - 19522071
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||| ||| ||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  19522004 agataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 19522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1079953 - 1080021
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||||||||| ||| ||| ||||||| |||||||||||| ||||||||||||||||||    
T  1079953 agataatgtgaatatgagagagaaagttgtcacaaaaattgtaaaaaataattgttcaaatatcatttc 1080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26791245 - 26791313
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||||||| |||||    
T  26791245 agataatgtgagcatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatattatttc 26791313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 32872905 - 32872967
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| | | ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  32872905 gtgagtatgaaaaagaaaattgtcacaaaagttgtcaaaaaatagttgttcaaatatcatttc 32872967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 1274421 - 1274360
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  1274421 gtgagtatgaaagataaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcatttc 1274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 1764287 - 1764226
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||| ||||||||||||||  ||||||||||||||||||    
T  1764287 gtgagtatgagagagaaagttgtcacagaagttgtaaaaaatgattgttcaaatatcatttc 1764226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 611934 - 611866
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| ||||| || ||||||||||||||||||    
T  611934 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcatttc 611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 7076577 - 7076637
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||||||| ||||||| || ||||||||  ||||||||||||||||||    
T  7076577 tgagtatgagagagaaaattgtcacaaaaattataaaaaatgattgttcaaatatcatttc 7076637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 13089783 - 13089851
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||| ||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  13089783 gataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 13089851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18258794 - 18258862
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||||| ||| ||| ||| |||||| |||||||| |||||||||||||||||||    
T  18258794 agataatgtaagtatgagagagaaagttgtcactaaagttataaaaaatggttgttcaaatatcatttc 18258862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 31748397 - 31748338
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    ||||| ||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||    
T  31748397 agtataagagaaaaagttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatttc 31748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36739018 - 36738951
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| ||| ||| ||||| ||||||||||||| || ||||| |||||||||    
T  36739018 agataatgtgagtatgagagagaaagttgtcacaagagttgtaaaaaatggtggttcatatatcattt 36738951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 40829483 - 40829416
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagtt-gtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||||||| ||||||| ||  |||||||| ||||| |||||||||||||    
T  40829483 ataatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcatttc 40829416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5168253 - 5168187
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatt 67  Q
    |||||| |||||||||||||| ||| ||| ||| |||||||| |||||  |||||||||||||||||    
T  5168253 agataatgtgagtatgagagataaagttgtcactaaagttgtgaaaaacggttgttcaaatatcatt 5168187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 11954495 - 11954433
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaa-aatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| || ||||| |||||||||||||||||||||||    
T  11954495 gtgagtatgagagagaaagttgtcacaaaaattataaaacaatagttgttcaaatatcatttc 11954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 15479529 - 15479471
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||| ||| || ||||||||||||||||  ||||||||||||||||||    
T  15479529 agtatgagagagaaagttgtcataaaagttgtaaaaaatgattgttcaaatatcatttc 15479471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 17097809 - 17097871
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| | ||||||| |||||||||| | ||||||| |||||||||||||||||||    
T  17097809 gtgagtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 17097871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 1981951 - 1981892
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| ||| ||| |||||||||  | |||||| |||||||||||||||||||    
T  1981951 gagtatgagagagaaagttgtcacaaaagtgtttaaaaatggttgttcaaatatcatttc 1981892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 4719719 - 4719652
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||  ||| |||||||||||| ||||| | ||||| |||||||||||||    
T  4719719 ataatgtgagtatgagagaaaaggttgtcacaaaagttgtcaaaaattggttgtacaaatatcatttc 4719652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 7076462 - 7076427
Alignment:
Q  34 aaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||| |||||||||||||||||||    
T  7076462 aaaagttgtaaaaaatggttgttcaaatatcatttc 7076427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21156056 - 21155989
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||| ||| |||  || |||||||||||| ||||||| |||||||||||||||||||    
T  21156056 ataatgtgagtatgaaagagaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 21155989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22098324 - 22098257
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  22098324 ataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 22098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 35075578 - 35075645
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||| ||| ||||  |||||| |||||||  ||||||||||||||||||    
T  35075578 ataatgtgagtatgagagaaaaagttgtcacatcagttgtcaaaaaatgattgttcaaatatcatttc 35075645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 6517776 - 6517714
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  6517776 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 6517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 6529087 - 6529021
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||||| ||| || |||| |  || |||||| |||| |||||||||||||    
T  6529087 ataacgtgagtatgagagaaaaagttgtcaaaaaattgttagaaaataattgtacaaatatcatttc 6529021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7287192 - 7287258
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||| ||| ||| ||| |||||||||||| ||||||| |||||| |||||||||||    
T  7287192 ataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaaatggttgtttaaatatcattt 7287258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 8920142 - 8920080
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  8920142 gtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 8920080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 13309951 - 13309885
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||| ||||||||| ||| ||  ||||||| |||| ||||||||||||||||||||||||||    
T  13309951 ataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatagttgttcaaatatcattt 13309885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 14923119 - 14923085
Alignment:
Q  35 aaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||| |||||||||||||||||||    
T  14923119 aaagttgtaaaaaatggttgttcaaatatcatttc 14923085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 18695382 - 18695320
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| || ||||| ||||| |||||||||||||    
T  18695382 gtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttc 18695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42446298 - 42446360
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| |||||| ||| |||   |||||||||| |||||||||||||||||||||||||||    
T  42446298 gtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttc 42446360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 43214066 - 43214128
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| || ||||||| ||||||||||| |  ||||||| |||||||||||||||||    
T  43214066 gtgagtatgagtgagaaaattgtcacaaaagttgttgcaaaatagatgttcaaatatcatttc 43214128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 19981994 - 19982055
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||||| ||||||| || | |||||||  ||||| ||||||||||||    
T  19981994 tgagtatgagagaaaaaattgtcacaaaaattatcaaaaaatgattgttaaaatatcatttc 19982055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20770200 - 20770132
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt--aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||||  ||||||| | | |||||||||||||||    
T  20770200 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaaatggattttcaaatatcatttc 20770132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 39807722 - 39807783
Alignment:
Q  9 tgagtatgagagaaaaaa-ttgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||  ||| ||| || |||| ||||||||||| |||||||||||||||||||    
T  39807722 tgagtatgagagagtaaagttgtcataaaaattgtaaaaaatggttgttcaaatatcatttc 39807783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 1671604 - 1671544
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||| ||||||| ||||||| || ||||||||  |||| |||||||||||||    
T  1671604 tgagtatgacagagaaaattgtcacaaaaattataaaaaattattgtccaaatatcatttc 1671544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7552968 - 7553029
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||| ||||||| ||| ||| ||||||||||||||||||    ||||||||||||||||    
T  7552968 ataatgtgagtgtgagagagaaagttgtcacaaaagttgtaaaaaa----tgttcaaatatcattt 7553029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 10232644 - 10232676
Alignment:
Q  33 caaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||||| |||||||||||||||||||||    
T  10232644 caaaagttgtataaaatagttgttcaaatatca 10232676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 35233379 - 35233351
Alignment:
Q  37 agttgtaaaaaatagttgttcaaatatca 65  Q
    |||||||||||||||||||||||||||||    
T  35233379 agttgtaaaaaatagttgttcaaatatca 35233351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35634837 - 35634905
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||| ||||| ||| |||  ||||||||||| ||||||  ||||||||||||||||||    
T  35634837 agataatgtaagtataagagagaaagttgtaacaaaagttgtcaaaaatgattgttcaaatatcatttc 35634905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 41724250 - 41724190
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttca 70  Q
    ||||||||||||||||||| |||||||||||| |  |||||  |||||||||||| |||||    
T  41724250 agtatgagagaaaaaattgtcacaaaagttgtcagtaaataaatgttcaaatatcgtttca 41724190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10250516 - 10250584
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  10250516 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatagttgttcaaatatcatttc 10250584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36177976 - 36177908
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  36177976 agataatgtgagtatgagagagaaaattgcgacaaaagttgtaaaaaatggttgttcaaatatcatttc 36177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37297119 - 37297051
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37297119 agataatgtgagtatgagagagaaaattgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 37297051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26724970 - 26725038
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| |||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||    
T  26724970 agataacgtgagtaagagagaaaaagttgtcacaaaagttataaaaaataattgttcaaatatcatttc 26725038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5622528 - 5622460
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| ||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  5622528 agataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 5622460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23369333 - 23369401
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||||| |||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  23369333 agataatgtgagtaagagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 23369401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27965057 - 27964989
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| | ||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  27965057 agataatgtgagtatgaaataaaaagttgtcacaaaagtcgtaaaaaatagttgttcaaatatcatttc 27964989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 39478497 - 39478437
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  39478497 tgagtatgagagagaaagttgtcacaaaagttgtaaaaaatagttgttcatatatcatttc 39478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 46213040 - 46212972
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||||| |||||||||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  46213040 agataatgtgagtacgagagaaaaagttgtcacaaaaattataaaaaatagttgttcaaatatcatttc 46212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 46634170 - 46634102
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    
T  46634170 agataatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttc 46634102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43175052 - 43174986
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  43175052 ataatgtgagtatgagagagaaagttatcacaaaagttgtaaaaaatggttgttcaaatatcatttc 43174986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 50890076 - 50890142
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| |||||||||||| |||||||||||||    
T  50890076 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaatagttgtacaaatatcatttc 50890142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37997324 - 37997258
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  37997324 agataatgtgagtatgagagaaag--ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 37997258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 39440547 - 39440486
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||||||  ||||||||||||||||||| |||||||||||||||||||    
T  39440547 gtgagtatgaaagagaaaattatcacaaaagttgtaaaaaatggttgttcaaatatcatttc 39440486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2268508 - 2268576
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||||| |||||| | |||||||||||||||||    
T  2268508 agataatgtgagtatgagagagaaagttgtcacaaaagttgttaaaaatggatgttcaaatatcatttc 2268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29175297 - 29175229
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||| ||||||| |||||||||||  ||||||| ||||||||||    
T  29175297 agataatgtgagtatgagagaaaaagttgtcacaaaaattgtaaaaaatgattgttcatatatcatttc 29175229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40348864 - 40348796
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| ||||||| || ||||||||  ||||||||||||||||||    
T  40348864 agataatgtgagtatgagagagaaaattgtcacaaaaattataaaaaatgattgttcaaatatcatttc 40348796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 45083043 - 45082983
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||||||  |||||||||||| |||||| |||||||||||||||||||    
T  45083043 tgagtatgagagagaaaattatcacaaaagttgtcaaaaatggttgttcaaatatcatttc 45082983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51986112 - 51986044
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || ||||||| ||||||||| ||||||||||||||||||    
T  51986112 agataatgtgagtatgagagagaaagttgtcataaaagttataaaaaataattgttcaaatatcatttc 51986044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26732295 - 26732229
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatt 67  Q
    |||||| |||||||||||||| ||| ||| ||| |||||||| |||||| |||||||||||||||||    
T  26732295 agataatgtgagtatgagagataaagttgtcactaaagttgtgaaaaatggttgttcaaatatcatt 26732229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 51255810 - 51255748
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  51255810 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 51255748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 56557797 - 56557735
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||||||| |||||||||||| | ||||| |||||||||||||||||||    
T  56557797 gtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcatttc 56557735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38510772 - 38510841
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttg-ttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||  || ||||||||||||||||| ||| |||||||||||||||    
T  38510772 agataatgtgagtatgagagataaaattatcataaaagttgtaaaaaataattgtttcaaatatcatttc 38510841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 55609173 - 55609234
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||| ||||| ||||| |||||||||||||    
T  55609173 gtgagtatgagagagaaagttgtcacaaaagttgtacaaaatggttgtacaaatatcatttc 55609234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 5932765 - 5932833
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  5932765 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 5932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 29531615 - 29531674
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| |||||| |||||||||||| |||||||||||||||||||    
T  29531615 tgagtatgagagagaaagttgtcacaaa-gttgtaaaaaatggttgttcaaatatcatttc 29531674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38134423 - 38134355
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||| | ||| ||| ||||||| ||||||||||| |||||||||||||||||||    
T  38134423 agataatgtaagtatgagaaagaaagttgtcacaaaaattgtaaaaaatggttgttcaaatatcatttc 38134355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 50050696 - 50050640
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||| ||||||| |||| ||||||| ||||||||||||||||||    
T  50050696 tatgagagagaaaattgtcacaaaaattgtcaaaaataattgttcaaatatcatttc 50050640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 14443259 - 14443200
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||||||| |||||||||||| |||||||  ||||||||||||||||||    
T  14443259 agtatgagagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 14443200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 31641568 - 31641632
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||| ||||||| ||| ||| ||||||||||  |||||||||||||||||||||||||||    
T  31641568 ataatgtgagtgtgagagagaaagttgtcacaaaagtt--aaaaaatagttgttcaaatatcatttc 31641632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 34114120 - 34114185
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcattt 68  Q
    ||||||||||||||||||||||| ||| || ||||||| ||| ||||||||||| ||||||||||||    
T  34114120 ataacgtgagtatgagagaaaaagttgtca-aaaagttataataaaatagttgtacaaatatcattt 34114185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 42815468 - 42815406
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| || ||||||||||| |||||||||||||    
T  42815468 gtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttc 42815406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 193596 - 193535
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| || ||||||| ||||||||||||| |||||  |||| |||||||||||||    
T  193596 gtgagtatgagggagaaaattgtcacaaaagttgtacaaaatgattgtgcaaatatcatttc 193535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 38519857 - 38519796
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||||||||||||| ||| ||| ||||||| |||| ||||||| ||||||||||||||||||    
T  38519857 gtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatcattt 38519796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53801758 - 53801815
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttca 58  Q
    |||||| |||||||||| | ||||| ||| ||||||||||||||||||| ||||||||    
T  53801758 agataatgtgagtatgaaaaaaaaagttgtcacaaaagttgtaaaaaatggttgttca 53801815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27051087 - 27051155
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||  ||||||| || |||||||| |||||| ||||||||||||    
T  27051087 agataatgtgagtatgagagagaaagttatcacaaaaattataaaaaatggttgtttaaatatcatttc 27051155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53781838 - 53781905
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| ||| |||||||  | |||||||||| ||||||||||| |||||||||||||    
T  53781838 agataatgtgagtatgaaagagaaaattgt-ataaaagttgtacaaaatagttgtacaaatatcatttc 53781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1795984 - 1796051
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||  ||||||||||| |||||||| ||||| |||||||||||||    
T  1795984 ataatgtgagtatgagagataaagttatcacaaaagttgttaaaaaattgttgtacaaatatcatttc 1796051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 7632464 - 7632531
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatag-ttgttcaaatatcatttc 69  Q
    |||| |||||||||| ||| ||||||  |||||||||||| |||||| | ||||||||||||||||||    
T  7632464 ataatgtgagtatgaaagagaaaattatcacaaaagttgtcaaaaattgattgttcaaatatcatttc 7632531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 30170022 - 30170089
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| | ||||||| ||||||||||| |||||    
T  30170022 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatataatttc 30170089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 56474766 - 56474833
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatag-ttgttcaaatatcatttc 69  Q
    |||| |||||||| ||||| ||||||| ||||||| ||||||||||  | ||||||||||||||||||    
T  56474766 ataatgtgagtataagagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaatatcatttc 56474833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 2401674 - 2401612
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  2401674 gtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 2401612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 18882982 - 18883044
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||||  ||||||| |||||||| ||||||||    
T  18882982 gtgagtatgagagagaaagttgtcacaaaagttgtagcaaaatagatgttcaaaaatcatttc 18883044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 32012956 - 32012898
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  32012956 gtatgagagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttc 32012898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 32696796 - 32696858
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||||||  ||||||||||| || ||||| ||||| |||||||||||||    
T  32696796 gtgagtatgagagagaaaattatcacaaaagttgttagaaaatggttgtacaaatatcatttc 32696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37060386 - 37060320
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||| ||||||||| ||| ||| |||||||||||| ||||||| |||||||||||| |||||    
T  37060386 ataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaataacattt 37060320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 44539796 - 44539738
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||| ||  ||||||| || |||||||| |||||||||||||||||||    
T  44539796 agtatgagagagaaagttatcacaaaaattataaaaaatggttgttcaaatatcatttc 44539738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 336815 - 336876
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||| ||| ||| ||||||| |||| ||||||| |||| |||||||||||||    
T  336815 gtgaatatgagagagaaagttgtcacaaaaattgtcaaaaataattgtacaaatatcatttc 336876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 26910257 - 26910205
Alignment:
Q  16 gagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||| ||| ||||||||||||||||||| ||| |||||||||||||||    
T  26910257 gagagagaaagttgtcacaaaagttgtaaaaaatggtt-ttcaaatatcatttc 26910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 28458379 - 28458447
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt--aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||||||||  ||||||| | | |||||||||||||||    
T  28458379 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaaatggattttcaaatatcatttc 28458447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 36408140 - 36408099
Alignment:
Q  24 aaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  36408140 aaattgtcacaaaagttgtatcaaatagttgttcaaatatca 36408099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 36413263 - 36413222
Alignment:
Q  24 aaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  36413263 aaattgtcacaaaagttgtatcaaatagttgttcaaatatca 36413222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38376494 - 38376559
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||| |||| ||| ||||||||| ||| || |||| |||||||||||  |||||||||||||||||    
T  38376494 ataatgtgaatattagagaaaaagttgtcaaaaaaattgtaaaaaatgattgttcaaatatcattt 38376559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42916714 - 42916653
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcattt 68  Q
    |||||||||||| | ||| ||| |||||||||||| | ||||| ||||||||||||||||||    
T  42916714 gtgagtatgagaaagaaagttgacacaaaagttgttataaaatggttgttcaaatatcattt 42916653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 5234410 - 5234366
Alignment:
Q  21 aaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||    
T  5234410 aaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatca 5234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 6309388 - 6309416
Alignment:
Q  37 agttgtaaaaaatagttgttcaaatatca 65  Q
    |||||||||||||||||||||||||||||    
T  6309388 agttgtaaaaaatagttgttcaaatatca 6309416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9472514 - 9472582
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || |||| |  || ||||||||||| |||||||||||||    
T  9472514 agataatgtgagtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttc 9472582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 17805520 - 17805460
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatat 63  Q
    |||| |||||||||||||| ||||||| || |||| |  |||||||||||||| |||||||    
T  17805520 ataatgtgagtatgagagagaaaattgtcaaaaaattattaaaaaatagttgtacaaatat 17805460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 20760325 - 20760257
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||| | ||||| ||||||| | ||| |||||||||||| |||||||| |||| |||||||||||||    
T  20760325 gataacataagtataagagaaatagttgtcacaaaagttgttaaaaaataattgtacaaatatcatttc 20760257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 20766716 - 20766648
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||| | ||||| ||||||| | ||| |||||||||||| |||||||| |||| |||||||||||||    
T  20766716 gataacataagtataagagaaatagttgtcacaaaagttgttaaaaaataattgtacaaatatcatttc 20766648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 25523200 - 25523267
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| || ||||||||| | ||||||||||| |||||||||||||    
T  25523200 gataatgtgagtatgagagagaaagttgtca-aaaagttgtgagaaaatagttgtacaaatatcatttc 25523267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26908096 - 26908151
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| | ||||||| ||||||| || ||||||||| ||||||||||||||||||    
T  26908096 tatgagaaagaaaattgtcacaaaaattataaaaaata-ttgttcaaatatcatttc 26908151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 51734642 - 51734702
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| ||| ||| ||||||||||| | |||| | |||||||||||||||||||    
T  51734642 gagtatgagagagaaagttgtcacaaaagttgtttaaaagtggttgttcaaatatcatttc 51734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 52430940 - 52430880
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcattt 68  Q
    |||||| |||||| ||||||| || ||||||||| | ||||||||||| ||||||||||||    
T  52430940 tgagtacgagagagaaaattgtcataaaagttgtcataaaatagttgtacaaatatcattt 52430880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 30735296 - 30735361
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  30735296 ataatgtgagtatgagagaaaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcattt 30735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37685401 - 37685333
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  37685401 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 37685333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37700117 - 37700185
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  37700117 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 37700185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 8350204 - 8350265
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  8350204 gtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 8350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15083051 - 15083119
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || ||||||||||| ||||||| |||||||||||| |||||| |||||||||||||||||||    
T  15083051 agataaagtaagtatgagagagaaaattgtcacaaaagttgtcaaaaatggttgttcaaatatcatttc 15083119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33100878 - 33100810
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || |||||||||||||||| |||||||||||||||||||    
T  33100878 agataatgtgagtatgagagagaaagttgtcaaaaaagttgtaaaaaatggttgttcaaatatcatttc 33100810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45333640 - 45333572
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||||||| ||| ||| |||||||||||||||||||  ||||||||||||||||||    
T  45333640 agataacgttagtatgagagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttc 45333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 49020406 - 49020473
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||    
T  49020406 ataatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaatatcatttc 49020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 649839 - 649770
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||||||| ||||| |||||||||||||||||||    
T  649839 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttc 649770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 27465065 - 27465126
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| |||||| ||||||||||||    
T  27465065 gtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgtttaaatatcatttc 27465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 50932369 - 50932308
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||| |||||||||| ||||||||  || |||||||||||||||    
T  50932369 gtgagtatgagagaaaaaattgtcacaaaagttataaaaaattattattcaaatatcatttc 50932308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3159446 - 3159378
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| || |||| || ||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  3159446 agataatgtaagtacgaaagaaaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 3159378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23645481 - 23645413
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || |||||||||||||||| ||||| |||||||||||||    
T  23645481 agataatgtgagtatgagagataaagttgtcaaaaaagttgtaaaaaatggttgtccaaatatcatttc 23645413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31088251 - 31088183
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||||||| ||  |||||||||| |||||||| ||||||||||||| |||||    
T  31088251 agataatgtgagtatgagagaaaaagttatcacaaaagttataaaaaatggttgttcaaatattatttc 31088183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 9566963 - 9567030
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  9566963 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 9567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 48983675 - 48983737
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  48983675 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 48983737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 35369763 - 35369702
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||| | ||| ||| |||||||||||||||||||  ||||||||||||||||||    
T  35369763 gtgagtatgagatagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcatttc 35369702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 6693223 - 6693167
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||| | ||||||    
T  6693223 tgagtatgagagaaaaagttgtcacaaaagttgtaaaaaattgttgttaatatatca 6693167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37275034 - 37275102
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| ||| ||| ||  |||||||||| |||||||| |||||||||||||||||||    
T  37275034 agataatgtgagtatgaaagagaaagttatcacaaaagttataaaaaatggttgttcaaatatcatttc 37275102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37619614 - 37619546
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||| | |||||| ||||| |||||||||||||    
T  37619614 agataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaatggttgtccaaatatcatttc 37619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 47642608 - 47642676
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||| | ||||||| |||||||||||||||||||    
T  47642608 gataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 47642676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 48858893 - 48858825
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  48858893 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 48858825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 2571703 - 2571637
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||| ||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||||    
T  2571703 gataatgtgactatgagagagaag-ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 2571637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 3982045 - 3982100
Alignment:
Q  14 atgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||| ||| ||| ||||||||||||||||||  |||||||||||||||||||    
T  3982045 atgagagagaaagttgtcacaaaagttgtaaaaaaaggttgttcaaatatcatttc 3982100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29359709 - 29359642
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| ||| |||  ||||||||| ||||||||  |||||||||||||||||    
T  29359709 agataatgtgagtatgagagagaaagttgttacaaaagttataaaaaatgattgttcaaatatcattt 29359642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40861261 - 40861328
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||| ||||||||| ||||||  ||||||| || |||||| ||||||||||||||||||||    
T  40861261 agataatgtgaatatgagagataaaattatcacaaaaattataaaaagtagttgttcaaatatcattt 40861328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 47214277 - 47214210
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| | ||||||| |||||||||||||||||    
T  47214277 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 47214210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 4213136 - 4213074
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||| | ||||||| |||||||||||||||||||    
T  4213136 gtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 4213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 32915079 - 32915141
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||||| |||||||||||||||||    
T  32915079 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 32915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 45042329 - 45042263
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||||||||||| || |||| |  || ||||||||||| |||||||||||||    
T  45042329 ataatgtgagtatgagagaaaaaattgtcaaaaaattgttagaaaatagttgtacaaatatcatttc 45042263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 50726263 - 50726317
Alignment:
Q  15 tgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||| ||||||||||||    
T  50726263 tgagagagaaagttgtcactaaagttgtaaaaaatagttgttgaaatatcatttc 50726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 52714904 - 52714970
Alignment:
Q  4 taacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||| | ||||||| ||||||||||| || ||||| | |||||||||||||||||    
T  52714904 taacgtgagtatgagaaagaaaattgtcacaaaagttgttataaaatggatgttcaaatatcatttc 52714970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2492482 - 2492417
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatt 67  Q
    |||| |||||||||||||| ||||||  |||||||||||||| ||||| ||||| |||||||||||    
T  2492482 ataatgtgagtatgagagagaaaattatcacaaaagttgtaataaaatggttgtacaaatatcatt 2492417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12657292 - 12657224
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||  | ||||| |||||||||||  ||||||||||||||||||    
T  12657292 agataatgtgagtatgagagagaaagttatctcaaaaattgtaaaaaatgattgttcaaatatcatttc 12657224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 740958 - 741025
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| |||| || ||||||||||| || |||||||||||  ||||||||||||    
T  740958 ataatgtgagtatgagagagaaaaatgtcacaaaagttgttagaaaatagttgtataaatatcatttc 741025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 1689460 - 1689393
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| ||||||| |||| | ||||||||||| |||||||||||||    
T  1689460 ataatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttc 1689393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 7171238 - 7171305
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| |  |||||| |||||||||||||||||    
T  7171238 ataatgtgagtatgagagataaagttgtcacaaaagttgtcattaaatagatgttcaaatatcatttc 7171305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9988020 - 9987953
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||| ||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  9988020 ataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttc 9987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17082745 - 17082812
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||| |||||||||| ||| ||| |||||||||||| ||||| ||||||||||||||| |||||    
T  17082745 ataatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtagttgttcaaatattatttc 17082812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 32926323 - 32926260
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttca 70  Q
    |||||||||||||||||||||  |||||||||| | | |||||  |||||||||||||||||||    
T  32926323 gtgagtatgagagaaaaaattatcacaaaagttatcataaaatgattgttcaaatatcatttca 32926260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 34008249 - 34008182
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||| | ||| ||| |||||||||||| | ||||||| |||||||||||||||||    
T  34008249 ataatgtgagtatgagatagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 34008182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 51286369 - 51286436
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| | ||||||  |||||||||||||||||    
T  51286369 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttc 51286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 52362551 - 52362484
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  52362551 ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 52362484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 10890053 - 10890115
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  10890053 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 10890115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 13489726 - 13489664
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  13489726 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 13489664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 15705069 - 15705131
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  15705069 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 15705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 27742677 - 27742619
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  27742677 gtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 27742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 35529387 - 35529449
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaat-agttgttcaaatatcatttc 69  Q
    |||||| ||||||||||| ||| ||||||||||||  |||||  |||||||||||||||||||    
T  35529387 gtgagtttgagagaaaaagttgtcacaaaagttgtctaaaatcggttgttcaaatatcatttc 35529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 49453603 - 49453653
Alignment:
Q  16 gagagaaaaaa-ttgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||||    
T  49453603 gagagaaaaaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 49453653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 50149010 - 50148948
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||| ||||||||||| |||||||||||| ||||| | |||||||||||||| ||||    
T  50149010 gtgaatatgaaagaaaaaattgtcacaaaagttgtcaaaaattggttgttcaaatatcgtttc 50148948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15470057 - 15470126
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || ||||||| | ||||||| |||||| ||||||||||||    
T  15470057 agataatgtgagtatgagagagaaagttgtcaaaaaagttataaaaaaatggttgttaaaatatcatttc 15470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 19947757 - 19947810
Alignment:
Q  17 agagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  19947757 agagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 19947810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 24806230 - 24806291
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| |||||||||||| ||||| | ||| |||||||||||||||    
T  24806230 tgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttattcaaatatcatttc 24806291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 26208244 - 26208301
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||||||| | |||||||  ||||||||||| |||||||||||| |||||| |||||    
T  26208244 agtatgagaaataaaattgttacaaaagttgtcaaaaatagttgtacaaataccattt 26208301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44672031 - 44672099
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||||||| || |||||||| ||||||||  |||| |||||||||||||    
T  44672031 agataatgtgagtatgagagagaaaattgtca-aaaagttgttaaaaaatgattgtacaaatatcatttc 44672099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 47215731 - 47215796
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatt 67  Q
    |||| |||||||||||||| ||||||| |||||||||||| |  | |||| |||||||||||||||    
T  47215731 ataatgtgagtatgagagagaaaattgtcacaaaagttgtcattatatagatgttcaaatatcatt 47215796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3851228 - 3851180
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaat 49  Q
    |||||| |||||||||||||| ||| ||| |||||||||| ||||||||    
T  3851228 agataatgtgagtatgagagagaaagttgtcacaaaagttataaaaaat 3851180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 26501488 - 26501548
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||| ||||||| |||||||||||| |||||| |||||  |||||| |||||    
T  26501488 tgagtatgaaagagaaaattgtcacaaaagttgttaaaaatggttgtataaatataatttc 26501548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30941456 - 30941388
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  30941456 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 30941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44189311 - 44189379
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| |||||||||| |||||||| |||||||||||||||||||    
T  44189311 agataatgtgagtatgagagagaaagttgacacaaaagttataaaaaatggttgttcaaatatcatttc 44189379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44895573 - 44895641
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||||||| | ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  44895573 agataacgtgaatatgagatagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 44895641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 13152662 - 13152595
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  13152662 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaatggttgttcaaatatcatttc 13152595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 43807820 - 43807881
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||| || |||| |||| ||| ||||||||||||||||||||||    
T  43807820 gtgagtatgagagaaaaaattgtcataaaaattgtcaaatatagttgttcaaatatcatttc 43807881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2362734 - 2362666
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| | ||||| ||| ||||||||||||||||||| |||||||| ||||||||||    
T  2362734 agataatgtgagtatgaaataaaaagttgtcacaaaagttgtaaaaaatggttgttcatatatcatttc 2362666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 40112967 - 40113023
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||    
T  40112967 tatgagagagaaaattctcacaaaaattgtaaaaaatagttgttcaaatatcatttc 40113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 12007193 - 12007255
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  12007193 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 12007255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 24532945 - 24533011
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  24532945 ataatgtgagtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatcattt 24533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 24614318 - 24614384
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||| |||||||||||| | ||||||  ||||||| || |||||||||||||||||||||||||||    
T  24614318 gataatgtgagtatgagaaagaaaattatcacaaaaattataaaaaatagttgttcaaatatcattt 24614384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 47448890 - 47448828
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||||||||||||||    
T  47448890 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 47448828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 23910253 - 23910320
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||| |||||||||||| |||| |||||||||||| ||||||| ||||| |||||||||||||    
T  23910253 ataatgtgaatatgagagaaaatattgtcacaaaagttgtcaaaaaatggttgtacaaatatcatttc 23910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 32529867 - 32529922
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||||||| ||| |||  ||||||||| |||||||||||||||||||||||||||    
T  32529867 tatgagagagaaagttgttacaaaagttataaaaaatagttgttcaaatatcattt 32529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 41018732 - 41018665
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||| | ||| ||| ||||||||||||  ||||||||||||||||||||||||||    
T  41018732 ataatgtgagtatgagatagaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatcatttc 41018665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 22605423 - 22605361
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaat-agttgttcaaatatcatttc 69  Q
    |||||| ||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||    
T  22605423 gtgagtttgagagagatagttgccacaaaagttgttaaaaattagttgttcaaatatcatttc 22605361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 32777714 - 32777776
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| || ||||||||| ||||||| |||||||||||||||||||    
T  32777714 gtgagtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttc 32777776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 37352174 - 37352112
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||||||||||  ||||||| |||| ||||||| |||||||||||||||||||    
T  37352174 gtgaatatgagagaaaaaattatcacaaaaattgtcaaaaaatggttgttcaaatatcatttc 37352112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38073266 - 38073204
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatat 63  Q
    |||||| ||||||||||||||  || ||| ||||||||||||||||||| |||||||| ||||    
T  38073266 agataatgtgagtatgagagagtaagttgtcacaaaagttgtaaaaaatggttgttcatatat 38073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 43025402 - 43025348
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatat 63  Q
    ||||||||||||| ||| ||| ||||||| ||||||||||| |||||||||||||    
T  43025402 tgagtatgagagataaagttgtcacaaaaattgtaaaaaatggttgttcaaatat 43025348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 43942685 - 43942651
Alignment:
Q  35 aaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||||||||||||||||||    
T  43942685 aaagttgtaaaaaatagttgttcaaatatcatttc 43942651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 25192916 - 25192953
Alignment:
Q  32 acaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25192916 acaaaagttgtaaaaaatggttgttcaaatatcatttc 25192953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 30061340 - 30061283
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||| ||||||| |||| |||||||||||||| ||||||||||||    
T  30061340 tatgagagagaaaattgtcacaaaaattgtcaaaaaatagttgttaaaatatcatttc 30061283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 31398187 - 31398126
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||  ||||||||||||| ||||| ||||| |||||||||||||    
T  31398187 gtgagtatgagagagaaagttatcacaaaagttgtataaaatggttgtacaaatatcatttc 31398126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38956619 - 38956685
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||||||||||||||   ||| ||| ||||||||||||||| |||||| ||||||||||||    
T  38956619 agataatgtgagtatgagagaaag--ttgtcactaaagttgtaaaaaatggttgtttaaatatcatttc 38956685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 22918450 - 22918510
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| | | || |||| ||||||||||| |||||||||||||||||||    
T  22918450 tgagtatgagagagaaagtagtcataaaaattgtaaaaaatggttgttcaaatatcatttc 22918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 29723934 - 29723997
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt--aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| || |  |||||||||||||||||||||||||||    
T  29723934 gtgagtatgagagagaaagttgtcacaaaaattatcaaaaaaatagttgttcaaatatcatttc 29723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41189544 - 41189612
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||| | ||| ||| ||||||| || |||||||| |||||||| ||||||||||    
T  41189544 agataatgtgagtatgagaaagaaagttgtcacaaaaattataaaaaatggttgttcatatatcatttc 41189612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 10055634 - 10055701
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||| | ||||||||||||||| |||| | ||||||| ||||| |||||||||||    
T  10055634 ataatgtgagtatgagaaagaaaattgccacaaaaattgtcacaaaatagatgttcgaatatcatttc 10055701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34108857 - 34108924
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| ||||||||||| || ||||| ||||| || ||||||||||    
T  34108857 ataatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatggttgtacatatatcatttc 34108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34349030 - 34349096
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| || |||||||||| |||||| ||||| |||||||||||||    
T  34349030 ataatgtgagtatgagagagaaaattgtca-aaaagttgtacaaaaatggttgtacaaatatcatttc 34349096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 2008869 - 2008927
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  2008869 gtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 2008927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 31436479 - 31436422
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    ||||||||||||||||||| || ||||||||| ||||||| ||||| ||||||||||||    
T  31436479 agtatgagagaaaaaattgtca-aaaagttgtcaaaaaatggttgtacaaatatcattt 31436422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 32933615 - 32933550
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||| ||||||| || |||| |||| | ||||| |||| |||||||||||||    
T  32933615 ataacgtgagtatgagagagaaaattgtca-aaaatttgtcacaaataattgtacaaatatcatttc 32933550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 37899387 - 37899325
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  37899387 gtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 37899325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 38861136 - 38861098
Alignment:
Q  31 cacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  38861136 cacaaaagttgtaaaaaatgattgttcaaatatcatttc 38861098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 39137221 - 39137155
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||| ||||| ||||||| || ||||||||||  |||| | |||||||||||||||||    
T  39137221 ataatgtgagtataagagataaaattgtcataaaagttgtaccaaatggatgttcaaatatcatttc 39137155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 44184566 - 44184628
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||||   ||||||| |||||||||||||||||    
T  44184566 gtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 44184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 47145075 - 47145133
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaat 61  Q
    |||| |||||| ||||||| ||||||| ||||||| || |||||||||||||| |||||    
T  47145075 ataatgtgagtgtgagagagaaaattgtcacaaaaattataaaaaatagttgtccaaat 47145133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 33057419 - 33057382
Alignment:
Q  32 acaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  33057419 acaaaagttgttaaaaaatagttgttcaaatatcattt 33057382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 37385241 - 37385301
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||||||||||||| ||| |||  ||||||||||| ||||||||||||| ||||||||||||    
T  37385241 gtgagtatgagagagaaagttgt-acaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 42598216 - 42598277
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||  ||||||| |||| ||||||||||||| |||||||||||||    
T  42598216 tgagtatgagagataaagttatcacaaaaattgttaaaaaatagttgtacaaatatcatttc 42598277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 7077692 - 7077648
Alignment:
Q  21 aaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  7077692 aaaaagttgtcacaaaagttgtttaaaatagttgttcaaatatca 7077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 8792545 - 8792493
Alignment:
Q  16 gagagaaaaaa-ttgccacaaaagttgtaaaaaatagttgttcaaatatcatt 67  Q
    ||||||||||| ||| |||||||||||||  |||| |||||||||||||||||    
T  8792545 gagagaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcatt 8792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 11325955 - 11325900
Alignment:
Q  13 tatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||| ||||||| |||| ||||||| |||| |||||||||||||    
T  11325955 tatgagagagaaaattgtcacaaaa-ttgtcaaaaataattgtacaaatatcatttc 11325900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 22195139 - 22195199
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttgtaaaaaat-agttgttcaaatatcatttc 69  Q
    |||| ||||||| ||| ||  |||||||||||| |||||| ||||||||||||||||||||    
T  22195139 gagtttgagagagaaagttatcacaaaagttgtcaaaaatcagttgttcaaatatcatttc 22195199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 26153713 - 26153648
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| ||  |||||||| | ||||||||||| |||||||||||||    
T  26153713 ataatgtgagtatgagagagaaaattgtca--aaagttgtcataaaatagttgtacaaatatcatttc 26153648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 34978366 - 34978298
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| ||||||| |||| ||||| |  ||||||||||||||||||    
T  34978366 gataatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttc 34978298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 43159584 - 43159644
Alignment:
Q  10 gagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| | ||| ||| ||||||| |||| ||||||| |||||||||||||||||||    
T  43159584 gagtatgagatagaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatcatttc 43159644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45335932 - 45335865
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgta-aaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| ||| |||  |||||||||||| |||||| ||||| ||||||||||||    
T  45335932 agataatgtgagtatgagagagaaagttgt-acaaaagttgtacaaaaatggttgtacaaatatcattt 45335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25811839 - 25811907
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  25811839 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 25811907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34047457 - 34047389
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  34047457 agataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 34047389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5570336 - 5570402
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  5570336 ataatgtgagtatgagagagaaaattgtcacaaaaattgtaaaaaatggttgttcaaatatcatttc 5570402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 14817995 - 14817934
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  14817995 gtgagtatgagagagaaagttgtcacaaaaattgtaaaaaatagttgttcaaatatcatttc 14817934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 22079566 - 22079632
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||| ||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  22079566 ataatgtgagtgtgagagagaaagttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 22079632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 26595417 - 26595351
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||||||||||||||||  | ||||||| | ||||||||||||||||||||||||||    
T  26595417 ataatgtgagtatgagagaaaaaattgttataaaagttatcaaaaatagttgttcaaatatcatttc 26595351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32316929 - 32316997
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||| ||| |||  || ||| |||||||||||||||||||||||||||||||||||    
T  32316929 agataatgtgagtatgaaagagaaagctgtcactaaagttgtaaaaaatagttgttcaaatatcatttc 32316997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 8645378 - 8645311
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| |||||  |||||||||||||||||||    
T  8645378 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtgttgttcaaatatcatttc 8645311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 8098605 - 8098664
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||   ||| ||||||||||||||||||| |||||||||||||||||||    
T  8098605 gtgagtatgagagaaag--ttgtcacaaaagttgtaaaaaatggttgttcaaatatcatttc 8098664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 34442070 - 34442132
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||||||| |||||||||||| | |||||||||| ||||||||||||||    
T  34442070 gtgagtatgagagagaaaattgtcacaaaagttgtcataaaatagttgctcaaatatcatttc 34442132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 5080570 - 5080635
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||| ||| ||| ||| ||||||||||||||||| | ||||||||||||||||||    
T  5080570 ataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaagtggttgttcaaatatcattt 5080635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 552863 - 552795
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||| ||||||||| ||| ||| |||| ||||||||||||||  ||||||||||||||||||    
T  552863 agataatgtgaatatgagagacaaagttgtcacataagttgtaaaaaatgtttgttcaaatatcatttc 552795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 1156771 - 1156723
Alignment:
Q  21 aaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  1156771 aaaaaattatcacaaaagttgtaaaaaatggttgttcaaatatcatttc 1156723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31077863 - 31077795
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||| ||||||||||| ||| ||| ||||||| || ||||||||  ||||||||||||||||||    
T  31077863 agataacgtaagtatgagagagaaagttgtcacaaaatttataaaaaatgattgttcaaatatcatttc 31077795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 31869129 - 31869069
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||| ||| ||||||||||||| ||||||||||| |||||||| ||||    
T  31869129 tgagtatgagagagaaagttgtcacaaaagttgtacaaaatagttgtacaaatatcttttc 31869069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17551381 - 17551448
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||||||||||||| ||| |||  ||||||||||| ||||||| |||||||||||||||||||    
T  17551381 ataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttc 17551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 277047 - 276993
Alignment:
Q  15 tgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||  ||||||| || ||||||||||||||| ||||||||||||    
T  277047 tgagagaaaaaattatcacaaaaattataaaaaatagttgttgaaatatcatttc 276993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 17182166 - 17182101
Alignment:
Q  5 aacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||||| ||||||||| ||||||| ||||||| || | |||||||||||||| ||||||||||||    
T  17182166 aacgtgaatatgagagagaaaattgtcacaaaaattatcaaaaaatagttgttaaaatatcatttc 17182101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 8505775 - 8505843
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||| ||||||||| ||| ||| |||||||||||| |||||||  ||||||||||||||||||    
T  8505775 gataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 8505843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 32253913 - 32253957
Alignment:
Q  21 aaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatca 65  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||    
T  32253913 aaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatca 32253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 2242029 - 2242091
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||| |||| |||||||  ||||||||||||||||||    
T  2242029 gtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttc 2242091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5694154 - 5694220
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||| ||||||| | ||||||  ||||||| ||||||||||| ||| |||||||||||||||    
T  5694154 ataatgtgaatatgagaaataaaattatcacaaaaattgtaaaaaatggttattcaaatatcatttc 5694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 11635542 - 11635604
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||| ||||||||| ||| ||| |||||||||||| |||||||  ||||||||||||||||||    
T  11635542 gtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 11635604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 18065101 - 18065159
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| |||||||||||| ||||| |  ||||||||||||||||||    
T  18065101 gtatgagagaaaaagttgtcacaaaagttgtcaaaaagtgattgttcaaatatcatttc 18065159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 20822875 - 20822937
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| | ||||| | |||||||||||||||||    
T  20822875 gtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 20822937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 33712380 - 33712322
Alignment:
Q  12 gtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||| ||| ||| |||||||||||| ||||| | |||||||||||||||||||    
T  33712380 gtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 33712322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 35213568 - 35213630
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgtaa-aaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| |||  ||||||||||| | ||||||| |||||||||||||||||    
T  35213568 gtgagtatgagagagaaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttc 35213630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 5739772 - 5739829
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatca 65  Q
    ||||||| ||| | ||| ||| |||||||||||| |||||||||||||||||||||||    
T  5739772 tgagtataagaaagaaagttgtcacaaaagttgttaaaaaatagttgttcaaatatca 5739829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 14094701 - 14094761
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||| ||||||  | |||||||| ||||||||| ||||  ||||||||||||    
T  14094701 tgagtatgagagagaaaattatcgcaaaagttataaaaaataattgtataaatatcatttc 14094761  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21506406 - 21506339
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||||| |||||||||||||| ||| ||| || ||||||||| ||||||| ||||| ||||||||||||    
T  21506406 agataatgtgagtatgagagagaaagttgtca-aaaagttgtcaaaaaatggttgtacaaatatcattt 21506339  T

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Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49365 - 49297
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| |||||||||||||| ||| ||| || ||||||| |||||||| |||||||||||||||||||    
T  49365 agataatgtgagtatgagagagaaagttgtcataaaagttataaaaaatggttgttcaaatatcatttc 49297  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 76620 - 76688
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||| |||||||||| ||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  76620 agataatgtgggtatgagagagaaagttgtcacaaaaattataaaaaatagttgttcaaatatcatttc 76688  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 8730 - 8671
Alignment:
Q  9 tgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcattt 68  Q
    ||||||||| ||| ||| ||| |||||||||||||||||||  |||||||||||||||||    
T  8730 tgagtatgaaagagaaagttgtcacaaaagttgtaaaaaatgattgttcaaatatcattt 8671  T

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Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 6527 - 6589
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| ||||||||||| ||||||||  ||||||||||||||||||    
T  6527 gtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttc 6589  T

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Target: scaffold0067 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 35563 - 35525
Alignment:
Q  31 cacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  35563 cacaaaagttgtaaaaaatggttgttcaaatatcatttc 35525  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 101913 - 101975
Alignment:
Q  8 gtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    |||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| ||||||||||    
T  101913 gtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcagatatcatttc 101975  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 366362 - 366296
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||| |||| ||||||||| ||| ||| |||||||||||| |||||| ||||| |||||||||||||    
T  366362 ataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaatggttgtacaaatatcatttc 366296  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 11006 - 10938
Alignment:
Q  2 gataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcatttc 69  Q
    ||||| |||||||||||||| ||| ||| |||||||||||| ||||| | ||||||||| |||||||||    
T  11006 gataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaattatcatttc 10938  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10964 - 11032
Alignment:
Q  1 agataacgtgagtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    |||||| ||||||||||| || ||||||  || |||| || |||||||||||| |||||||||||||||    
T  10964 agataatgtgagtatgagggagaaaattatcaaaaaaattataaaaaatagttattcaaatatcatttc 11032  T

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Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 34476 - 34411
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttgt-aaaaaatagttgttcaaatatcattt 68  Q
    |||| |||||||||||||| ||| ||| |||||| ||||| ||||||||||||| ||||||||||||    
T  34476 ataatgtgagtatgagagagaaagttgtcacaaa-gttgtcaaaaaatagttgtacaaatatcattt 34411  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 11841 - 11785
Alignment:
Q  11 agtatgagagaaaaaattgccacaaaagttgtaaaaaatagttgttcaaatatcatttc 69  Q
    ||||||||||| ||| ||| ||||||  ||||||||||| |||||||||||||||||||    
T  11841 agtatgagagagaaagttgtcacaaa--ttgtaaaaaatggttgttcaaatatcatttc 11785  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 121704 - 121642
Alignment:
Q  3 ataacgtgagtatgagagaaaaaattgccacaaaagttg-taaaaaatagttgttcaaatatc 64  Q
    |||| ||||||||||||||||||||||  |||||||||| ||||||||| | ||| |||||||    
T  121704 ataatgtgagtatgagagaaaaaattgttacaaaagttgttaaaaaataatagtttaaatatc 121642  T

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