View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11783_low_1 (Length: 730)
Name: NF11783_low_1
Description: NF11783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11783_low_1 |
 | |
|
| [»] scaffold0133 (4 HSPs) |
| | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0133 (Bit Score: 305; Significance: 1e-171; HSPs: 4)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 8 - 714
Target Start/End: Original strand, 12651 - 13366
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||||||| | | |||||| |||| |||||| ||||||||| |||||||| |||||||||||| || ||| |||||| |||| ||||| |
|
|
| T |
12651 |
aagcagacatgataggatcaacctcaggtaaactccaaaactcactttctagtacagaaatccattgatgttcgtcacttgtaaagcacaaactgcttcc |
12750 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| | ||| | | ||||||| |
|
|
| T |
12751 |
taatactttagcagcaagaggtgaacccacacattttctcactaactttttgcctattgccacaagctctgcacgctcttctctatttgctacaaaagct |
12850 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||| || || ||||| ||||| |||||| |||| | | | ||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12851 |
tgttgtttgaacaaagaccagatgtcatcatcagataagcttgctaaatgatgagcatcagaagttcccatgatggatgcaacaatgtcaagtctggtag |
12950 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| |||| |||| |||||||||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
12951 |
tgaccaaaattgatgcacctttc------tttccatgttgcaacgaagacttgaacttattccatttctcttggtcttcactccacacatcatcaagaac |
13044 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctacgacg |
492 |
Q |
| |
|
||| |||||| ||||||||||||||||||||| || ||| ||| ||||||||||||||| |||||||||||||||| ||| || | |
|
|
| T |
13045 |
aagcaaataccttttgttttgcaaaatttcttgaaccttttttcgcattgactctaaagaggagagatttggattttttccaatggtgtcttctatgatg |
13144 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
||||||||||| |||||| | ||||||||| | | |||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
13145 |
gactctaaaaccttcatcatactgaaatcatcagaaacacacacccatattttcaagtcaaaatgtgtctttacactttcatcattgaagaccatttgag |
13244 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||| |||||||||||||||| || |
|
|
| T |
13245 |
caagtgttgtttttccatatccaccgtggccaacaatggaatagacagagagttcttcactctcactggcgtgccttagcagaaactctacaatctgttc |
13344 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13345 |
tttatctttgtctcttccatat |
13366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 8 - 714
Target Start/End: Original strand, 8309 - 9024
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| ||||||| | | |||||| |||||||||| |||||||| |||||||| |||||||||||| | ||| || ||| |||| || || |
|
|
| T |
8309 |
aagcagacatgatagaatcaacctcaggcaaattccaaaattcactttccagtacagaaatccattgatgttcgttgcttgtacagcacaaactgctacc |
8408 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| | ||| ||||||||| |
|
|
| T |
8409 |
caatactttagcagcaagaggtgaacccacacattttctcactaactttttgcctattgccacaagctctgcacgctcttctcgattttctccaaaagct |
8508 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||| || || ||||| ||||| |||||| |||| | | | ||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8509 |
tgttgtttgaacaaagaccagatgtcatcatcagataagcttgctaaatgatgagcatcagaagttcccatgatggatgcaacaatgtcaagtctggtag |
8608 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
||| ||||||||||||||||||| ||||||| | |||| | |||| | || |||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
8609 |
tgatcaaaattgatgcacctttc------tttccatttagcaacaaagactttaacttattccatttctctttgtcttcagtccacacatcatcaagaac |
8702 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctacgacg |
492 |
Q |
| |
|
|||||||||| | || |||||||||||||||| || ||| | ||||||||||||||||| |||||||| |||||||| ||| || | |
|
|
| T |
8703 |
aagtaaatacctatttttttgcaaaatttcttgaaccttttgttgcattgactctaaagacgagagatgtggattttttccaatggtgttttctatgatg |
8802 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|||||||||||||||||| ||| |||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8803 |
gactctaaaactttcatcgcattgatatcaccagaaacacacacccatattttcaagtcaaaatgtgtctttaccctttcatcattgaagactgtttgag |
8902 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||| || | |||||||||||||||||| | ||| |
|
|
| T |
8903 |
caagtgttgtttttccatatccaccgtggccaacaatagaatagacagagagttcttcactgtcaccagcgtgccgtagaagaaactctacaatatgctc |
9002 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
9003 |
tttatctttgtctcttccatat |
9024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 17857 - 18150
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
17857 |
aagcagacattatagggttatcctcagataaattccaaacctcactttcctttacagaaagccattgatgttcctcacttttaaagcgcagaaggcttcc |
17956 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
||| || || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||| |
|
|
| T |
17957 |
caaaaccttggcagcaagaggtgaacccacgcattttctcactatctccttacctattgctgcaagctctgcgcgctcctccccatttggtccaacagca |
18056 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtc |
301 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||||||| |
|
|
| T |
18057 |
tgttgtttaaataatgaccaaatgtcatcatcatataaacctaccaaatggtgagcagggtgagatcacgtgatggatgcaacaatctcaagtc |
18150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 439
Target Start/End: Original strand, 26947 - 26997
Alignment:
| Q |
389 |
tccacacatcatcaagaacaagtaaatactttttgttttgcaaaatttctt |
439 |
Q |
| |
|
|||||||| |||| || |||||||||||||||||| ||||||||| ||||| |
|
|
| T |
26947 |
tccacacagcatccagtacaagtaaatactttttgctttgcaaaacttctt |
26997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 8 - 714
Target Start/End: Original strand, 16987256 - 16987971
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||||||| | |||||||| ||||||||||| ||||||||| |||||||| |||||||||||| || ||| | ||||| ||||| |
|
|
| T |
16987256 |
aagcagaaatgataggatcatcctcaggtaaattccaaatctcactttccagtacagaaatccattgatgttcgtcagtttcacgttgcaaactgcttcc |
16987355 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| |||||||||| | || ||| |||||| | ||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
16987356 |
caatactttagcagcaagaggtgaacccacaaattttctcaccaacttcttacctatttccacaagctctgcacgctcttctccattttctccgaaagct |
16987455 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||| || || ||||| |||| |||||| |||| || |||||| | |||||||| | |||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
16987456 |
tgttgtttgaacaaagaccagatgtgatcatcagataagccgaccaaaggatgagcaggataagttcccatgatggatgcaacattgtcaagtctggtgg |
16987555 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
||||||||| |||||||||||||| || |||| |||| |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
16987556 |
tgaccaaaactgatgcacctttcgttctatttt------gcaacacagacttgaacttattccatttctctcggtcttcagtccacacatcatcaagaac |
16987649 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggattttctac---------------gacg |
492 |
Q |
| |
|
|||||||||| |||||||||| | |||||||| || || ||||||||||||||||||| |||||||| |||||||| | | || |
|
|
| T |
16987650 |
aagtaaataccttttgttttgtagaatttcttgaacatttttttgcattgactctaaagacgagagatgtggattttttccaatagtgttttcaatgatc |
16987749 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|||||||||||||||||| | ||||||||| | | |||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
16987750 |
gactctaaaactttcatcatactgaaatcatcagaaacacacacccatattttcaagtcaaaatgtgtctttacactttcatcattgaagaccatttgag |
16987849 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||| || |
|
|
| T |
16987850 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagagagtttttcactgtcactagcatgtcttagaagaaactctacaatctgttc |
16987949 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16987950 |
tttatctttgtctcttccatat |
16987971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 36 - 714
Target Start/End: Original strand, 17069336 - 17070020
Alignment:
| Q |
36 |
taaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaatacattagcagcaagaggcgaaccc |
135 |
Q |
| |
|
||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
17069336 |
taaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaagaggtgaaccc |
17069435 |
T |
|
| Q |
136 |
acacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtttaaataatgaccaaatgtcgt |
235 |
Q |
| |
|
|||||||||||||||| || | ||||||| | |||||||||||||| |||| | || | |||||||||||||||||| || || ||||| ||||| | |
|
|
| T |
17069436 |
acacattttctcactaacttttggcctatttccacaagctctgcacgcccttctctctttgctccaaaagcatgttgtttgaacaaagaccagatgtcat |
17069535 |
T |
|
| Q |
236 |
catcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttcgctcc |
335 |
Q |
| |
|
||||| |||| | | ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
17069536 |
catcagataaccgtgataaaggatgagcatcatgagttcccatgatggatgcaacaatgtcaagtctggtagtgactaaaattgatgcacctttc----- |
17069630 |
T |
|
| Q |
336 |
atttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaagtaaatactttttgttttgcaaaatt |
435 |
Q |
| |
|
||||||| | | || | |||| |||| ||||||||| | || |||| ||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
17069631 |
-tttccatttggtaacaaagacttgaagctattccatttcacttggtcatcactccacacatcatcaagaacaagcaaataccttttgctttgcaaaatt |
17069729 |
T |
|
| Q |
436 |
tctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctacgacggactctaaaactttcatccttctgaaat |
520 |
Q |
| |
|
|||| || ||| |||||| |||||||||||| | |||||| | |||||| ||| || ||||||||||| ||||||| ||||||| |
|
|
| T |
17069730 |
tcttgaacctttttttgccttgactctaaagacaagagatctagattttttccaatggtgttttctatgatggactctaaaattttcatcaaactgaaat |
17069829 |
T |
|
| Q |
521 |
cacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgctgtttttccatatccaccgtg |
620 |
Q |
| |
|
|| | | |||||||||||||||| |||||||||||||||| || ||||||||||||||| |||| ||||||| |||| ||||||||| | ||| || |
|
|
| T |
17069830 |
catccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttccttgtccgccaac |
17069929 |
T |
|
| Q |
621 |
gccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatat |
714 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17069930 |
accaacaatggaatagacagagagttcttcactgtcactagcat---ttagaagaaactctacaatctgctctttatctttgtctcttccatat |
17070020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 11 - 685
Target Start/End: Complemental strand, 18873546 - 18872857
Alignment:
| Q |
11 |
cagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaa |
110 |
Q |
| |
|
|||| |||||||| || ||||| ||||| |||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | |
|
|
| T |
18873546 |
cagacatgataggattgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcagttttaaagcgcaaaaggcttcctag |
18873447 |
T |
|
| Q |
111 |
tacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgt |
210 |
Q |
| |
|
||| || || |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| | | ||||||| | | |
|
|
| T |
18873446 |
tacttttgcggcaagaggagaacccacacattttctcactaactccttgcctattgccacaagctctgcacgctcttctctatttgtttcaaaagctttt |
18873347 |
T |
|
| Q |
211 |
tgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtga |
310 |
Q |
| |
|
|||||||| || |||| ||| | |||||| |||| |||| |||||| |||||||| | |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
18873346 |
tgtttaaacaaataccagatggcatcatcagataagcctaacaaatgatgagcaggataagttcccatgattgatgcaacaatgtcaagtctggttgtga |
18873247 |
T |
|
| Q |
311 |
ccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaag |
410 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| || ||| | | || |||| | |||||||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
18873246 |
ccaaaactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattccatttctcttggtcttcattccacacatcatcaagaacaag |
18873147 |
T |
|
| Q |
411 |
taaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacggac |
495 |
Q |
| |
|
|| |||| |||||||||||||||| | ||||| ||| ||||||||||| ||||||| |||||||| |||||| ||||| || |||| |
|
|
| T |
18873146 |
tagataccttttgttttgcaaaatatttttaaccttcttttgcattgattctaaagacgagagatctggattttttccatcggtggattctatgatggac |
18873047 |
T |
|
| Q |
496 |
tctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaa |
595 |
Q |
| |
|
| |||||||||||| | || ||||| | | |||||||||||||||| |||||| ||| ||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
18873046 |
tgcaaaactttcatcatactaaaatcctcagaaacacacacccatattttcaagttaaagtgtgtatctaccctttcatcattgaagaccacttgagcaa |
18872947 |
T |
|
| Q |
596 |
gtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaa |
685 |
Q |
| |
|
||| ||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||| |||| |
|
|
| T |
18872946 |
gtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgacttagaagaaactcaacaa |
18872857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 8 - 330
Target Start/End: Original strand, 16780901 - 16781223
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
16780901 |
aagcagacatgatagggttatcctcagataacttccaaagctcactttcctttacagaaagccattgatgttcctcatttttaaagcgcaaaaggcttcc |
16781000 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
||| || || |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16781001 |
caaaaccttggcagcaagtggtgaacccacacattttatcactatctccttgcctattgctgcaagctctgcaggctcttccccattaggtccaaaagcg |
16781100 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |
|
|
| T |
16781101 |
tgttgtttaaataatgtccaaatgtcgtcgtcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatatcaagtcgtgttg |
16781200 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttc |
330 |
Q |
| |
|
|||| ||||| |||| ||||||| |
|
|
| T |
16781201 |
tgactaaaatagatgaacctttc |
16781223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 714
Target Start/End: Original strand, 16657814 - 16658523
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||| | ||||||| |||| ||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||| ||||| ||||| |
|
|
| T |
16657814 |
aagcagacatgacatggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgtaaaaggcttcc |
16657913 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| || | ||||||| | |||| ||||||||| |||| | ||| | |||||||||| |
|
|
| T |
16657914 |
caatactttagcagcaagaggtgaacccacacattttctcactaacttttggcctatttccacaagatctgcacgcccttctctatttgctccaaaagca |
16658013 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||| || || ||||| ||||| |||||| |||| | | ||| | ||| | | |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16658014 |
tgttgtttgaacaacgaccagatgtcatcatcagataactgtgctaaaggatgaacc---ttagttcccatgatggatgcaacaatctcaagtctggtag |
16658110 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
||||||||||||||||||||||| |||||| || |||| | |||| | || |||||||||| |||| |||||||| |||| |||||||||||||| |
|
|
| T |
16658111 |
tgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaac |
16658204 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctacgacg |
492 |
Q |
| |
|
||| |||||| |||||||||||||||| |||| || ||| |||| | |||||||||||| | |||||| | | |||| ||| || | |
|
|
| T |
16658205 |
aagcaaataccttttgttttgcaaaatatcttgaaccttttttttccttgactctaaagacaagagatctaggttttttccaatggtgttttctatgatg |
16658304 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|||||||||| ||||| ||||||||| | | |||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
16658305 |
gactctaaaattttcagtaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgaagaccatttgag |
16658404 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
| |||| ||||||||| | ||| || |||||||||||| |||||| |||||||||||| || ||||||| ||||||||||||||||||||| ||| |
|
|
| T |
16658405 |
cgagtgttgtttttccttgtccgccaacaccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctc |
16658501 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16658502 |
tttatctttgtctcttccatat |
16658523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 61 - 714
Target Start/End: Original strand, 16837535 - 16838195
Alignment:
| Q |
61 |
acagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaatacattagcagcaagaggcgaacccacacattttctcactatctccttgc |
160 |
Q |
| |
|
||||||| |||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| || | || |
|
|
| T |
16837535 |
acagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagcaagaggtgaacccacacattttctcactaacttttggc |
16837634 |
T |
|
| Q |
161 |
ctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtg |
260 |
Q |
| |
|
||||| | |||||||||||||| |||| | ||| | |||||||||||||||||| || || ||||| ||||| |||||| |||| | | ||| | || |
|
|
| T |
16837635 |
ctatttccacaagctctgcacgcccttctctatttgctccaaaagcatgttgtttgaacaacgaccagatgtcatcatcagataactgtgctaaaggatg |
16837734 |
T |
|
| Q |
261 |
agcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatg |
360 |
Q |
| |
|
| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | |||| | |||| || |
|
|
| T |
16837735 |
aacc---ttagttcccatgatggatgcaacaatctcaagtctggtagtgaccaaaattgatgcacctttc------tttccatttggcaacaaagacttg |
16837825 |
T |
|
| Q |
361 |
aatttattccattcctctcggtcttcagtccacacatcatcaagaacaagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgact |
460 |
Q |
| |
|
|| ||||||||| | || |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||| ||| ||| |||| |
|
|
| T |
16837826 |
aacgtattccatttcacttggtcatcactccacacatcatcaagaacaagcaaataccttttgttttgcaaaatttcttgaaccttttttcgcaaggact |
16837925 |
T |
|
| Q |
461 |
ctaaagtcgagagatttggatttt----------------ctacgacggactctaaaactttcatccttctgaaatcacctgcaacacacacccatattg |
544 |
Q |
| |
|
|||||| | |||||| | |||||| ||| || ||||||||||| ||||||| ||||||||| | | |||||||||||||||| |
|
|
| T |
16837926 |
ctaaagacaagagatctagatttttttccaatggtgttttctatgatggactctaaaattttcatcaaactgaaatcatccgaaacacacacccatattt |
16838025 |
T |
|
| Q |
545 |
tcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgag |
644 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| |||| |||||| |||| ||||||||| | ||| || ||||||||||||||||||| ||| |
|
|
| T |
16838026 |
tcaagtcaaaatgtgtttttaccctttcatcattgtagaccacttgagcgagtgttgtttttccttgtccgccaacaccaacaatggaatagacagagag |
16838125 |
T |
|
| Q |
645 |
ttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatat |
714 |
Q |
| |
|
||||||||| | ||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16838126 |
ttcttcactgttactagcatgccctataagaaactctacaatctgctctttatctttgtctcttccatat |
16838195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 685
Target Start/End: Complemental strand, 18806552 - 18805863
Alignment:
| Q |
11 |
cagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaa |
110 |
Q |
| |
|
|||| |||||||| || ||||| ||||| |||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| | |
|
|
| T |
18806552 |
cagacatgataggattgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcagttttaaagcgcaaaaggcttcctag |
18806453 |
T |
|
| Q |
111 |
tacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgt |
210 |
Q |
| |
|
||| || || |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| | ||| | | ||||||| | | |
|
|
| T |
18806452 |
tacttttgcggcaagaggtgaacccacacattttctcactaactccttgcctattgccacaagctctgctcgctcttctctatttgtttcaaaagctttt |
18806353 |
T |
|
| Q |
211 |
tgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtga |
310 |
Q |
| |
|
|||||||| || |||| || | |||||| |||| |||| |||||| |||||||| | |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
18806352 |
tgtttaaacaaataccagattgcatcatcagataagcctaacaaatgatgagcaggataagttcccatgattgatgcaacaatgtcaagtctggttgtga |
18806253 |
T |
|
| Q |
311 |
ccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaag |
410 |
Q |
| |
|
||||||||||||||||||||| ||||||||| || ||| | | || |||| | |||||||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
18806252 |
ccaaaattgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattccatttctcttggtcttcattccacacatcatcaagaacaag |
18806153 |
T |
|
| Q |
411 |
taaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacggac |
495 |
Q |
| |
|
|| |||| |||||||||||||||||| || || | ||||||||||| ||||||| |||||||| |||| | ||||| || |||| |
|
|
| T |
18806152 |
tagataccttttgttttgcaaaattttttgaacttccttttgcattgattctaaagacgagagatctggactttttccaacggcggattctatgatggac |
18806053 |
T |
|
| Q |
496 |
tctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaa |
595 |
Q |
| |
|
| |||||||||||| | || ||||| | | |||||||||||||||| |||||| ||| ||||| | ||||||||||||||||| || |||||||| |
|
|
| T |
18806052 |
tgcaaaactttcatcatactaaaatcctcagaaacacacacccatattttcaagttaaagtgtgtatctaccctttcatcattgaataccacttgagcaa |
18805953 |
T |
|
| Q |
596 |
gtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaa |
685 |
Q |
| |
|
||| ||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||| |||| |
|
|
| T |
18805952 |
gtgttgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgacttagaagaaactcaacaa |
18805863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 36 - 714
Target Start/End: Original strand, 16796999 - 16797683
Alignment:
| Q |
36 |
taaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaatacattagcagcaagaggcgaaccc |
135 |
Q |
| |
|
||||||||||| |||||||| |||||||| |||||||||||| || ||| ||||||||||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
16796999 |
taaattccaaaattcactttccagtacagaaatccattgatgttcgtcgcttgtaaagcgcaaactgcttcccaatactttagcagcaagaggtgaaccc |
16797098 |
T |
|
| Q |
136 |
acacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtttaaataatgaccaaatgtcgt |
235 |
Q |
| |
|
|||||||||||||||| || |||||||||||| ||||||||||||||||||| | ||| | ||||||||| |||||||| || || ||||| ||||| | |
|
|
| T |
16797099 |
acacattttctcactaacttcttgcctattgccacaagctctgcacgctcttctctatttgctccaaaagcttgttgtttgaacaaagaccagatgtcat |
16797198 |
T |
|
| Q |
236 |
catcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttcgctcc |
335 |
Q |
| |
|
||||| |||| | | ||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16797199 |
catcagataaccgtgttaaatgatgaaca---taagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatgcacctttc----- |
16797290 |
T |
|
| Q |
336 |
atttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaagtaaatactttttgttttgcaaaatt |
435 |
Q |
| |
|
||||||| | |||| | ||| |||| ||||||||| | || |||| ||| |||||||||||||||||||||| |||||| ||| ||||||||||||| |
|
|
| T |
16797291 |
-tttccatttggcaacaatgacttgaacgtattccatttcacttggtcatcactccacacatcatcaagaacaagcaaatacctttggttttgcaaaatt |
16797389 |
T |
|
| Q |
436 |
tctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctacgacggactctaaaactttcatccttctgaaat |
520 |
Q |
| |
|
|||| || ||| ||| ||| |||||||||| | |||| | | |||||| ||| || |||||||||| ||||||| ||||||| |
|
|
| T |
16797390 |
tcttgaaccttttttcgcaaggactctaaagacaagagttctagattttttccaatggtgttttctatgatagactctaaaattttcatcaaactgaaat |
16797489 |
T |
|
| Q |
521 |
cacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgctgtttttccatatccaccgtg |
620 |
Q |
| |
|
|| | | |||||||||||||||| |||||||||||||||| || ||||||||||||||| |||| |||||| |||| ||||||||| | ||| || |
|
|
| T |
16797490 |
catccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccacttgagcgagtgttgtttttccttgtccgccaac |
16797589 |
T |
|
| Q |
621 |
gccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccatat |
714 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16797590 |
accaacaatggaatagacagagagttcttcactggtactagcatgccctagaagaaactctacaatctgttctttatctttgtctcttccatat |
16797683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 714
Target Start/End: Complemental strand, 16868359 - 16867652
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||| | ||||||| || | ||||||||||| ||||||||| |||||| |||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
16868359 |
aagcagacatgacatggttatcatctgctaaattccaaaactcactttccaccacagaagtccattgatgttcatcgcttttaaagcgcaaaaggcttcc |
16868260 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||| || | ||||||| | |||||||||||||| |||| | ||| | |||||||||| |
|
|
| T |
16868259 |
caatactttagcagcaagaggtgaacccacacattttctcactaacttttggcctatttccacaagctctgcacgcccttctctatttgctccaaaagca |
16868160 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||| || || || || ||||| |||||| |||| | | ||| | ||| | | |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16868159 |
tgttgtttgaacaacgatcagatgtcatcatcagataactgtgctaaaggatgaac---cttagttcccatgatggatgcaacaatctcaagtctggtag |
16868063 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
||||||||||||||||||||||| |||||| || |||| | |||| | || |||||||||| |||| |||||||| |||| |||||||||||||| |
|
|
| T |
16868062 |
tgaccaaaattgatgcacctttc------tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaac |
16867969 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttgga---------------ttttctacgacg |
492 |
Q |
| |
|
||| |||||||||||||||||||||||||||| || ||| ||| || | ||||||| | |||||| | || |||||| || | |
|
|
| T |
16867968 |
aagcaaatactttttgttttgcaaaatttcttgaaccttttttctcaaggtttctaaagacaagagatctagattttttccaatggtgttttctgtgatg |
16867869 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|||||||||| ||||||| |||||||| | | || |||||||||||| |||||||||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
16867868 |
gactctaaaattttcatcaaactgaaatcgtccgaaa--cacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgaagaccacttgag |
16867771 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
| |||| ||||||||| | ||| || |||||||||||| |||||| |||||||||||| || ||||||| ||||||||||||||||||||| ||| |
|
|
| T |
16867770 |
cgagtgttgtttttccttgtccgccaacaccaacaatggaacagacagagagttcttcactgtcgctagcat---ttagaagaaactctacaatctgctc |
16867674 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16867673 |
tttatctttgtctcttccatat |
16867652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 11 - 714
Target Start/End: Original strand, 16787772 - 16788482
Alignment:
| Q |
11 |
cagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaa |
110 |
Q |
| |
|
|||| |||||||| | |||||||| ||||||||||| ||||||||| |||||||| |||||||||||| || ||| |||| |||||| |||||||| |
|
|
| T |
16787772 |
cagacatgataggatcatcctcagttaaattccaaaactcactttccagtacagaaatccattgatgttcgtcgcttgtaaatcgcaaactgcttcccaa |
16787871 |
T |
|
| Q |
111 |
tacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgt |
210 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||||||||||| ||||| | ||| || ||||| ||| |
|
|
| T |
16787872 |
tactttagcagcaagagttgaacccacacattttctcactaacttcttgcctatttccacaagctctgcacgttcttctctattttctctgaaagcttgt |
16787971 |
T |
|
| Q |
211 |
tgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtga |
310 |
Q |
| |
|
||||| || || ||||| ||||| |||| |||| | | ||| | |||||| | | |||| ||||||||||||||||||||||||||| | ||||| |
|
|
| T |
16787972 |
tgtttgaacaaagaccagatgtcagaatcagataagcgtgttaaacgatgagcatgataagttgccatgatggatgcaacaatgtcaagtcgtgcagtga |
16788071 |
T |
|
| Q |
311 |
ccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaag |
410 |
Q |
| |
|
||||||||||||||||||||| || ||| | |||| | |||| |||| |||||||||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
16788072 |
ccaaaattgatgcacctttcg------tttcatattgcaacaaagacttgaacttattccatttctcttggtcttcattccacacatcatcaagaacaag |
16788165 |
T |
|
| Q |
411 |
taaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacggac |
495 |
Q |
| |
|
|| |||| |||||||||| |||||||||| || ||| ||| |||||||||| |||| ||||||| |||||| ||||| ||||| | |
|
|
| T |
16788166 |
tagataccttttgttttg-aaaatttcttgaaccttctttcgcattgactccaaagatgagagatctggattttttccaattgtgtcttctatgacgg-c |
16788263 |
T |
|
| Q |
496 |
tctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaat-gtgtcttcaccctttcatcattgaagactgtttgagca |
594 |
Q |
| |
|
|||||||| |||||| | ||||||||| ||| |||| | | ||||||| ||| |||||||| || |||| || ||||||| ||| | ||| ||||||| |
|
|
| T |
16788264 |
tctaaaaccttcatcatgctgaaatcatctgaaacaaaaatccatattttcaggtcaaaatggtttctt-actctttcattgttgtatactaattgagca |
16788362 |
T |
|
| Q |
595 |
agtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctt |
694 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||| | ||| ||| ||| ||||| |||||| |||||||| ||||| |
|
|
| T |
16788363 |
agtgttgtttttccatattcacctaggccaacaatggaatagacagagagttcttctttgtcagtagtatgctttagaggaaactttacaatctgctctt |
16788462 |
T |
|
| Q |
695 |
tatctttgtctcttccatat |
714 |
Q |
| |
|
||| | ||| ||||||||| |
|
|
| T |
16788463 |
tatatatgtaccttccatat |
16788482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 304 - 698
Target Start/End: Original strand, 16843925 - 16844334
Alignment:
| Q |
304 |
gtagtgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaa |
403 |
Q |
| |
|
||||||||||||| |||||||||||| | |||||||||| | |||| | ||||||||| |||| ||||| | | |||||||| |||| ||||| |||| |
|
|
| T |
16843925 |
gtagtgaccaaaactgatgcaccttttgttccatttccacattgcaaaaaagacatgaacttatcccatttatgttggtcttcattccaaacatcgtcaa |
16844024 |
T |
|
| Q |
404 |
gaacaagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatttt---------------ctac |
488 |
Q |
| |
|
| |||||||||||| |||||||||||||||| || || ||| | |||||||| | |||||||||||| |||||||||| |||| |
|
|
| T |
16844025 |
ggacaagtaaataccttttgttttgcaaaatagtttgaaccttttcttgcattgcttgtaaagtcgagaggtttggatttttcccatctttggattctac |
16844124 |
T |
|
| Q |
489 |
gacggactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtt |
588 |
Q |
| |
|
|| |||| |||| |||||| | || |||||| | | |||||| ||||||||| |||| |||||| || || ||||| |||||||||||||| | |
|
|
| T |
16844125 |
gatcgactgcaaaatcttcatcatactaaaatcatcagaaacacaaacccatattttcaaaggaaaatgagtatttaccctctcatcattgaagaccagt |
16844224 |
T |
|
| Q |
589 |
tgagcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatct |
688 |
Q |
| |
|
|||||||||||||| |||||||||||||| || ||||||||||||||||||| |||| |||| | ||| ||||||| |||||||||||||| |||| || |
|
|
| T |
16844225 |
tgagcaagtgctgtctttccatatccaccatgaccaacaatggaatagacagagagtccttccttgtcaatagcatgccttagaagaaactcaacaacct |
16844324 |
T |
|
| Q |
689 |
tctctttatc |
698 |
Q |
| |
|
| || ||||| |
|
|
| T |
16844325 |
tttccttatc |
16844334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 31 - 188
Target Start/End: Original strand, 16843628 - 16843785
Alignment:
| Q |
31 |
tcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaatacattagcagcaagaggcg |
130 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| ||||||||||||| |||||| ||||||| |||| ||| ||||| | ||| || ||||||||||||| |
|
|
| T |
16843628 |
tcagataaattccaaatctcactttcctttatagaaagccattgacattcctcagttttaaaccgcagaaggcttcctagtactttggcagcaagaggcg |
16843727 |
T |
|
| Q |
131 |
aacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttc |
188 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||| | |||| |||||||| ||||| |
|
|
| T |
16843728 |
aacccacacattttctaactatctccttacctattgttacaaggtctgcacgttcttc |
16843785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 514 - 714
Target Start/End: Original strand, 16781422 - 16781622
Alignment:
| Q |
514 |
ctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgctgtttttccatatc |
613 |
Q |
| |
|
||||||||| ||| |||||| ||||||||| |||| |||||||| || | || |||||||| ||| | || ||||||||||| |||||||||||||| |
|
|
| T |
16781422 |
ctgaaatcatctgaaacacaaacccatattttcaaatcaaaatgggtggttacgctttcatccttgtataccaattgagcaagtgttgtttttccatatc |
16781521 |
T |
|
| Q |
614 |
caccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctcttccata |
713 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| |||||||| | |||||||| || |||||| |||| ||||| | ||||||||| ||||||||||||| |
|
|
| T |
16781522 |
cacctaggccaacaatggaatagacagagagatcttcactattgctagcatgcctcagaagatactcaacaatttgttctttatctctgtctcttccata |
16781621 |
T |
|
| Q |
714 |
t |
714 |
Q |
| |
|
| |
|
|
| T |
16781622 |
t |
16781622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 16781282 - 16781369
Alignment:
| Q |
389 |
tccacacatcatcaagaacaagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatt |
476 |
Q |
| |
|
||||||||||||| || |||||||||||||||||| ||||||||| ||||| || || ||||||||| | ||||||||||||||||| |
|
|
| T |
16781282 |
tccacacatcatccagtacaagtaaatactttttgctttgcaaaacttcttgaacttttttttgcattaattctaaagtcgagagatt |
16781369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 680
Target Start/End: Complemental strand, 18870443 - 18870385
Alignment:
| Q |
622 |
ccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactc |
680 |
Q |
| |
|
|||||||||||||||| || |||||||||||| ||| |||||| ||||| |||||||| |
|
|
| T |
18870443 |
ccaacaatggaatagaaagagagttcttcactgtcaagagcatgacttagcagaaactc |
18870385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 8 - 714
Target Start/End: Complemental strand, 38939718 - 38938997
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
38939718 |
aagcagacatgatagggttatcctcagataaattccaaagctcactttcctttacagaaaaccattgatgttcctcacttttaaagcgcaaaaggcttcc |
38939619 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
38939618 |
caatactttggcagcaagaggtgaacccacacattttctcactatctccttgcctattgctacaagctctgcatgctcttccccatctggtccaaaagca |
38939519 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |
|
|
| T |
38939518 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatctcaagtcgtgttg |
38939419 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
|||| ||||| ||||| ||||||| | ||||||| ||| | | | | || || | ||||| || | |||| ||||||||||||| || || |
|
|
| T |
38939418 |
tgactaaaatagatgcccctttcgttgtatttccactcttcaaaaaatgcttcaacttttcccattttacttgttcttggttccacacatcatccagtac |
38939319 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacg |
492 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||| || || ||||||||||| || |||||| ||| ||| |||| ||||| || | |
|
|
| T |
38939318 |
aagtaaataccttttgctttgcaaaacttcttgaacttttttttgcattgattccaaagtcaagaaattatgattttgtccagtggcagattctatgatg |
38939219 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|| | || | ||||||| | ||||||||| ||| |||||| ||||||||| |||| |||||||| || | || ||||||| ||| |||| ||||| |
|
|
| T |
38939218 |
gagtgtaggattttcatcatgctgaaatcatctgaaacacaaacccatattttcaaatcaaaatgggtggttacgctttcattgttgtagaccaattgag |
38939119 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||| |||||||||||||||||| | ||||||||||||||||||| ||| |||||||| | ||||||| || |||||| |||| ||||| | || |
|
|
| T |
38939118 |
caagtgttgtttttccatatccacctagaccaacaatggaatagacagagagatcttcactgttgttagcatgcctcagaagatactcaacaatttgttc |
38939019 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
38939018 |
tttatctttgtctcttccatat |
38938997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 8 - 714
Target Start/End: Complemental strand, 7053625 - 7052904
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| ||||| || |||||||||||||||||||||| || ||||| |||| ||||||||||||||||| ||| | |||||| || ||||| ||||| |
|
|
| T |
7053625 |
aagcagacatgattggattatcctcagataaattccaaaacttgctttcctttatagaaagccattgatgtttctcacgtttaaatcgtaaaaggcttcc |
7053526 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
||||| || || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||||||| | |
|
|
| T |
7053525 |
taatacttttgctgcaagaggtgaacccacacattttctcactatctccttgcctattgtggcaagctctgcatgctcttctccatttggtccaaaagta |
7053426 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
||||| || || | ||||||||| |||||| |||||||||| ||| | ||| || |||||||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
7053425 |
cagtgtttgaacaaaggccaaatgtcatcatcagataaacctactaaaagatgacggggttgagttcccatgatagatgcaacaatttcaagtcttgtag |
7053326 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
|||| |||||||||| ||||||| | | || || |||| | | || |||| || | ||||| | |||||||| |||| |||||||| | || |
|
|
| T |
7053325 |
tgactaaaattgatgaacctttccttgtaattgcagactgcaacaaaaacttgaacttgtaccatttaccatggtcttcattccaaacatcatctaatac |
7053226 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacg |
492 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||| || ||| |||||||| || |||| || |||||||| ||||| ||||| || | |
|
|
| T |
7053225 |
aagtaaataccttttgctttgcaaaacttcttgaacctttttttgcatggattctagagaagagagattaggattttgtcctgtggcagattctatgatg |
7053126 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|| | || | ||| ||| | ||||||||| ||| |||||| ||||||||| ||||||||||||| || | || |||||||| || |||| ||||| |
|
|
| T |
7053125 |
gagtgtaggattttaatcatgctgaaatcatctgaaacacaaacccatattttcaagtcaaaatgggtgcttacactttcatcgttatagaccaattgag |
7053026 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||| ||||| || |||||||||||| ||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
7053025 |
caagtgttgtttttccatatccactgtggccaacaatgggatagatagagagttcttcactgtcactagcatgcctcagaagaaactcgacaatcttctc |
7052926 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
7052925 |
tttatctttgtctcttccatat |
7052904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 714
Target Start/End: Original strand, 13377893 - 13378614
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||| |
|
|
| T |
13377893 |
aagcagacatgatagggttatcctcagataaattccaaagcttactttcctttacagaaagccattgatgttcctcacttttaaagcgcgaaaggcttcc |
13377992 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
||| || || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13377993 |
caaaaccttggcagcaagaggtgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaatagca |
13378092 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
||| ||||||| || ||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
13378093 |
tgtagtttaaacaaagaccaaatgtcttcatcatgtaatcctaccaaatgatgagcagggtgagttcccatgatggatgcaacaatctcaagtcgcgtag |
13378192 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaac |
407 |
Q |
| |
|
|||| |||||||||| |||||| | | | ||| | |||| | | || |||| || | ||||| | |||||||| ||||||||||||| || || |
|
|
| T |
13378193 |
tgactaaaattgatgatcctttccttgtaatgccacattgcaacaaaaacttgaacttttcccatttaacatggtcttcattccacacatcatctagtac |
13378292 |
T |
|
| Q |
408 |
aagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacg |
492 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||| || || ||||||||||| || |||| | |||||| ||||| ||||| || |
|
|
| T |
13378293 |
aagtaaataccttttgctttgcaaaacttcttgaacttttttttgcattgattccaaagacatgagattcggatttcgtcctgtttcagattctatgata |
13378392 |
T |
|
| Q |
493 |
gactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgag |
592 |
Q |
| |
|
|| | || | |||| || | ||||||||| | | |||||| ||||||||| |||||||||| || || | || ||||||| ||| | || ||||| |
|
|
| T |
13378393 |
gaatgtaggattttcttcatactgaaatcatcagaaacacaaacccatattttcaagtcaaagtgggtgcttacgttttcatcgttgtacaccaattgag |
13378492 |
T |
|
| Q |
593 |
caagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctc |
692 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| || | ||| |||| ||||||||| |||| ||||| | || |
|
|
| T |
13378493 |
caagtgttgtttttccatatccacctaggccaacaatggaatagacagagatatcttctctgttacttgcatcccttagaagatactcaacaatttgttc |
13378592 |
T |
|
| Q |
693 |
tttatctttgtctcttccatat |
714 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
13378593 |
tttatctttgtctcttccatat |
13378614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 711
Target Start/End: Original strand, 8953 - 9664
Alignment:
| Q |
8 |
aagcagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcc |
107 |
Q |
| |
|
||||||| |||||||| | |||||||| ||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
8953 |
aagcagacatgataggatcatcctcagttaaattccaaagctcactttccttgacagagagccattgatgttcctcacttttaaagcacaaaagacttcc |
9052 |
T |
|
| Q |
108 |
caatacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagca |
207 |
Q |
| |
|
|||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
9053 |
caatactttggcagcaagaggtgaacccacacattttctcacaatctccttgcctattgtt------tct-cacgctcttccccatcaggtccaaaagca |
9145 |
T |
|
| Q |
208 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtag |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |
|
|
| T |
9146 |
tgttgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatatcaagtcgtgttg |
9245 |
T |
|
| Q |
308 |
tgaccaaaattgatgcacctttcgctccatttcca-tgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaa |
406 |
Q |
| |
|
|||| ||||| ||||||||||||| | ||||||| | | |||| | | | || || | ||||| || | |||| ||||||||||||| || | |
|
|
| T |
9246 |
tgactaaaatagatgcacctttcgttgtatttccactcttcaaataatg-cttcaacttttcccattttacttgttcttggttccacacatcatcgagta |
9344 |
T |
|
| Q |
407 |
caagtaaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgac |
491 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| || || |||||||| || || |||||| ||| ||| || | ||||| || |
|
|
| T |
9345 |
caagtaaatactttttgctttgcaaaacttcttgaacttttttttgcatcgattccaaagtcaagaaattatgactttgtccagtggcagattctatgat |
9444 |
T |
|
| Q |
492 |
ggactctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttga |
591 |
Q |
| |
|
||| | || | ||||||| | ||||||||| ||| |||||| ||||||||| |||| |||||||| || | || ||||| || ||| | || |||| |
|
|
| T |
9445 |
ggagtgtaggattttcatcatgctgaaatcatctgaaacacaaacccatattttcaaatcaaaatgggtggttacgctttcttcgttgtaaaccaattga |
9544 |
T |
|
| Q |
592 |
gcaagtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttct |
691 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| || |||||| |||| ||||| || | |
|
|
| T |
9545 |
gcaagtgttgtttttccatatccacctaggccaacaatggaatagacagagagatcttcactgttgctagcatgcctcagaagatactcaacaatttttt |
9644 |
T |
|
| Q |
692 |
ctttatctttgtctcttcca |
711 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
9645 |
ctttatctttgtctcttcca |
9664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 685
Target Start/End: Original strand, 4482 - 5167
Alignment:
| Q |
16 |
atgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaa-gacttcccaataca |
114 |
Q |
| |
|
|||||||| || ||||| ||||| |||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||| | ||| |
|
|
| T |
4482 |
atgataggattgtcctcggataagctccaaaacttactttcctttacagaaagccattgatgttcctcacttttaaagcgcaaaaaggcttcctagtact |
4581 |
T |
|
| Q |
115 |
ttagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtt |
214 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| | | ||||||| | ||||| |
|
|
| T |
4582 |
ttggcagcaagaggcgaacccacacattttctcactaactccttgcctattgccacaagctctgcacgctcttctctatttgtttcaaaagctttttgtt |
4681 |
T |
|
| Q |
215 |
taaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaa |
314 |
Q |
| |
|
|||| || |||| ||| | |||||| |||| |||| |||||| |||||||| | |||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
4682 |
taaacaaataccagatggcatcatcagataagcctaacaaatgatgagcaggataagttcccatgattgatgcaacaatgtcaagtctggttgtgaccaa |
4781 |
T |
|
| Q |
315 |
aattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaagtaaa |
414 |
Q |
| |
|
|| |||||||||||||| ||||||||| || ||| | | || |||| | |||||||| |||| |||||||| |||||||||||||||||||||||| | |
|
|
| T |
4782 |
aactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattccatttctcttggtcttcattccacacatcatcaagaacaagtaga |
4881 |
T |
|
| Q |
415 |
tactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacggactcta |
499 |
Q |
| |
|
|| |||||||||||||||| | ||||| ||| ||||||||||| ||||||| |||||||| |||||| ||||| || ||||| | |
|
|
| T |
4882 |
tatcttttgttttgcaaaatatttttaaccttcttttgcattgattctaaagacgagagatctggattttttccatcggtggattctatgatggactgca |
4981 |
T |
|
| Q |
500 |
aaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgc |
599 |
Q |
| |
|
||||||||||| | | ||||| | | |||||||||||||||| |||||| ||| ||||| | |||||||| |||||||| || ||||||||||| |
|
|
| T |
4982 |
aaactttcatcatattaaaatcctcagaaacacacacccatattttcaagttaaagtgtgtatctaccctttcctcattgaacaccacttgagcaagtgt |
5081 |
T |
|
| Q |
600 |
tgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaa |
685 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||||||| |||||||||||| || |||||| |||||||||||||| |||| |
|
|
| T |
5082 |
tgtttttccttgcccaccaacaccaacaatggaatagacagagagttcttcactatcgacagcatgacttagaagaaactcaacaa |
5167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 685
Target Start/End: Original strand, 9158 - 9847
Alignment:
| Q |
11 |
cagagatgatagggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaa |
110 |
Q |
| |
|
|||| |||||||| || ||||| ||||| |||||| || ||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
9158 |
cagacatgataggattgtcctcggataagctccaaaacttactgtcctttacagaaagccattgatgttcctcacttttaaagcgcaaaagacttcctag |
9257 |
T |
|
| Q |
111 |
tacattagcagcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgt |
210 |
Q |
| |
|
||| || || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| | | ||||||| | | |
|
|
| T |
9258 |
tactttggcggcaagaggcgaacccacacattttctcactaactccttgcctattgccacaagctctgcacgctcttctctatttgtttcaaaagctttt |
9357 |
T |
|
| Q |
211 |
tgtttaaataatgaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtga |
310 |
Q |
| |
|
|||||||| || |||| ||| | |||||| |||| |||| |||||| |||||||| | |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
9358 |
tgtttaaacaaataccagatggcatcatcagataagcctaacaaatgatgagcaggataagttcccatgattgatgcaacaatgtcaagtctggttgtga |
9457 |
T |
|
| Q |
311 |
ccaaaattgatgcacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaag |
410 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| || ||| | | || |||| | |||||||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
9458 |
ccaaaactgatgcacctttcgtgccatttccacgttgcagaaaatacttgaactgattccatttctcttggtcttcaatccacacatcatcaagaacaag |
9557 |
T |
|
| Q |
411 |
taaatactttttgttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagatttggatt---------------ttctacgacggac |
495 |
Q |
| |
|
|| ||| |||| ||||||||||| | ||||| ||| ||||||||||| ||||||| |||||||| |||||| ||||| || |||| |
|
|
| T |
9558 |
tagatatcttttattttgcaaaatatttttaaccttcttttgcattgattctaaagacgagagatctggattttttccatcggtggattctatgatggac |
9657 |
T |
|
| Q |
496 |
tctaaaactttcatccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaa |
595 |
Q |
| |
|
| |||||||||||| | | ||||| | | |||||||||||||||| |||||| ||| ||||| | ||||||||||||||||| || |||||||| |
|
|
| T |
9658 |
tgcaaaactttcatcatattaaaatcctcagaaacacacacccatattttcaagttaaagtgtgtatctaccctttcatcattgaacaccacttgagcaa |
9757 |
T |
|
| Q |
596 |
gtgctgtttttccatatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaa |
685 |
Q |
| |
|
||| ||||||||| | ||||| ||||||||||||||||| | |||||||||||| || | |||| |||||||||||||| |||| |
|
|
| T |
9758 |
gtgttgtttttccttgcccaccaacaccaacaatggaatagacngagagttcttcactatccacaacatgacttagaagaaactcaacaa |
9847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 23 - 714
Target Start/End: Original strand, 37307 - 38001
Alignment:
| Q |
23 |
ggttatcctcagataaattccaaagctcactttcatttacagaaagccattgatgttcctcccttttaaagcgcaaaagacttcccaatacattagcagc |
122 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
37307 |
ggttatcatcagctaaattccaaaactcactttccaccacagaaatccattgatgttcatcgcttttaaagcgcaaaaggcttcccaatactttagcagc |
37406 |
T |
|
| Q |
123 |
aagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtttaaataat |
222 |
Q |
| |
|
|||||| |||||||||||||||||||||| || | ||||||| | |||||||||||||| |||| | ||| | |||||||||||||||||| || || |
|
|
| T |
37407 |
aagaggtgaacccacacattttctcactaacttttggcctatttccacaagctctgcacgcccttctctatttgctccaaaagcatgttgtttgaacaac |
37506 |
T |
|
| Q |
223 |
gaccaaatgtcgtcatcatataaacctaccaaatggtgagcagggtgagttcccatgatggatgcaacaatgtcaagtctggtagtgaccaaaattgatg |
322 |
Q |
| |
|
||||| ||||| |||||| |||| | | ||| | ||| | | |||||||||||||||||||||||| | |||||||||||||||||| ||||||| |
|
|
| T |
37507 |
gaccagatgtcatcatcagataactgtgctaaaggatgaac---cttagttcccatgatggatgcaacaatctgaagtctggtagtgaccaatattgatg |
37603 |
T |
|
| Q |
323 |
cacctttcgctccatttccatgtcgcaatacagacatgaatttattccattcctctcggtcttcagtccacacatcatcaagaacaagtaaatacttttt |
422 |
Q |
| |
|
|||||||| |||||| || |||| | |||| | || |||||||||| |||| |||||||| |||| ||||||||||||||||| |||||| |||| |
|
|
| T |
37604 |
cacctttc------tttccaagttgcaacaaagactttaacttattccatttctcttggtcttcactccaaacatcatcaagaacaagcaaatacctttt |
37697 |
T |
|
| Q |
423 |
gttttgcaaaatttctttaatcttattttgcattgactctaaagtcgagagat---------------ttggattttctacgacggactctaaaactttc |
507 |
Q |
| |
|
|||||||||||| |||| || ||| |||| | |||||||||||| | |||||| | | ||||||| || ||||||||||| |||| |
|
|
| T |
37698 |
gttttgcaaaatatcttgaaccttttttttccttgactctaaagacaagagatctaggttttttccaatggtgttttctatgatggactctaaaattttc |
37797 |
T |
|
| Q |
508 |
atccttctgaaatcacctgcaacacacacccatattgtcaagtcaaaatgtgtcttcaccctttcatcattgaagactgtttgagcaagtgctgtttttc |
607 |
Q |
| |
|
||| ||||||||| | | |||||||||||||||| |||||||||||||||| || ||||||||||||||| |||| ||||||| |||| |||||||| |
|
|
| T |
37798 |
atcaaactgaaatcatccgaaacacacacccatattttcaagtcaaaatgtgtttttaccctttcatcattgtagaccatttgagcgagtgttgtttttc |
37897 |
T |
|
| Q |
608 |
catatccaccgtggccaacaatggaatagacagcgagttcttcactctcactagcatgtcttagaagaaactctacaatcttctctttatctttgtctct |
707 |
Q |
| |
|
| | ||| || |||||||||||| ||||| |||||||||||| || || |||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37898 |
cttgtccgccaacaccaacaatggaacagacaaagagttcttcactttcgctggcat---ttagaagaaactctacaatctgttctttatctttgtctct |
37994 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 7581301 - 7581194
Alignment:
| Q |
121 |
gcaagaggcgaacccacacattttctcactatctccttgcctattgctgcaagctctgcacgctcttccccattaggtccaaaagcatgttgtttaaata |
220 |
Q |
| |
|
||||||||| | ||| |||||||| | |||||||||||||||||||| |||||||||||| |||||| | || | ||||||| |||| |||||| || | |
|
|
| T |
7581301 |
gcaagaggcaatcccgcacatttttttactatctccttgcctattgccacaagctctgcactctcttctctatcatgtccaaatgcatattgtttgaaca |
7581202 |
T |
|
| Q |
221 |
atgaccaa |
228 |
Q |
| |
|
|| ||||| |
|
|
| T |
7581201 |
ataaccaa |
7581194 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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