View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11784_high_20 (Length: 349)

Name: NF11784_high_20
Description: NF11784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11784_high_20
NF11784_high_20
[»] chr3 (73 HSPs)
chr3 (19-338)||(7606915-7607234)
chr3 (19-317)||(6063958-6064255)
chr3 (46-317)||(11169897-11170166)
chr3 (21-317)||(5899210-5899505)
chr3 (24-317)||(10956520-10956811)
chr3 (68-317)||(457702-457950)
chr3 (20-241)||(4308771-4308992)
chr3 (19-281)||(18097374-18097634)
chr3 (22-261)||(43227838-43228077)
chr3 (19-282)||(35918438-35918701)
chr3 (68-317)||(3306271-3306518)
chr3 (72-272)||(43421975-43422172)
chr3 (68-255)||(42991762-42991953)
chr3 (70-281)||(28100600-28100810)
chr3 (70-281)||(28137833-28138043)
chr3 (70-261)||(890310-890499)
chr3 (183-317)||(53916286-53916418)
chr3 (173-317)||(890507-890649)
chr3 (19-105)||(10595493-10595579)
chr3 (19-103)||(54192861-54192945)
chr3 (19-105)||(47878633-47878719)
chr3 (156-297)||(53916450-53916589)
chr3 (19-103)||(10901362-10901446)
chr3 (174-282)||(23636419-23636527)
chr3 (19-105)||(16461815-16461901)
chr3 (45-100)||(10094576-10094631)
chr3 (76-223)||(53916090-53916239)
chr3 (156-297)||(43422247-43422386)
chr3 (181-261)||(890705-890785)
chr3 (70-281)||(1619206-1619422)
chr3 (45-100)||(10201462-10201517)
chr3 (181-303)||(3316019-3316141)
chr3 (70-172)||(23636620-23636725)
chr3 (19-68)||(25388617-25388666)
chr3 (18-69)||(22114793-22114844)
chr3 (156-297)||(11169726-11169865)
chr3 (19-69)||(18099659-18099709)
chr3 (22-68)||(38210066-38210112)
chr3 (21-67)||(50493676-50493722)
chr3 (21-67)||(53896708-53896754)
chr3 (19-72)||(3859312-3859365)
chr3 (156-245)||(5899090-5899178)
chr3 (156-282)||(6064287-6064412)
chr3 (19-67)||(6066243-6066291)
chr3 (156-282)||(457546-457670)
chr3 (173-283)||(4309020-4309131)
chr3 (156-241)||(10956843-10956926)
chr3 (173-282)||(42991638-42991748)
chr3 (21-66)||(5191374-5191419)
chr3 (173-241)||(18097622-18097691)
chr3 (173-313)||(35918688-35918828)
chr3 (126-222)||(2075639-2075734)
chr3 (173-234)||(28138031-28138093)
chr3 (173-282)||(43227720-43227830)
chr3 (70-144)||(25635042-25635120)
chr3 (22-67)||(35777163-35777208)
chr3 (21-69)||(5885981-5886029)
chr3 (21-67)||(6719605-6719651)
chr3 (20-69)||(32218834-32218883)
chr3 (19-68)||(5858196-5858245)
chr3 (19-67)||(32264532-32264580)
chr3 (19-67)||(38889757-38889806)
chr3 (19-67)||(27101749-27101797)
chr3 (19-67)||(43225827-43225875)
chr3 (19-67)||(51727495-51727543)
chr3 (19-68)||(26720267-26720316)
chr3 (173-282)||(28100798-28100908)
chr3 (151-280)||(43402814-43402940)
chr3 (18-67)||(48362137-48362186)
chr3 (19-68)||(10949762-10949811)
chr3 (19-68)||(25690845-25690894)
chr3 (19-67)||(9605102-9605150)
chr3 (19-67)||(27762509-27762557)
[»] chr1 (59 HSPs)
chr1 (18-317)||(51751854-51752153)
chr1 (19-317)||(20301948-20302246)
chr1 (22-317)||(47179179-47179473)
chr1 (36-317)||(16227987-16228267)
chr1 (19-282)||(28842018-28842281)
chr1 (19-260)||(14098462-14098706)
chr1 (68-281)||(31736115-31736332)
chr1 (68-282)||(27337532-27337748)
chr1 (151-315)||(16430484-16430645)
chr1 (173-317)||(50077395-50077538)
chr1 (46-223)||(28201926-28202106)
chr1 (173-297)||(31423638-31423761)
chr1 (156-282)||(51751698-51751822)
chr1 (151-317)||(8954034-8954197)
chr1 (70-206)||(8347833-8347970)
chr1 (173-282)||(13126198-13126306)
chr1 (173-314)||(16430295-16430435)
chr1 (70-261)||(50077195-50077387)
chr1 (173-272)||(25249254-25249353)
chr1 (174-297)||(50077586-50077709)
chr1 (19-105)||(2393764-2393850)
chr1 (156-297)||(16227813-16227955)
chr1 (173-297)||(6996891-6997015)
chr1 (72-172)||(8954269-8954373)
chr1 (70-281)||(13125998-13126210)
chr1 (19-100)||(9526084-9526165)
chr1 (106-260)||(25249093-25249245)
chr1 (70-223)||(25127438-25127593)
chr1 (48-261)||(155234-155448)
chr1 (173-297)||(20301777-20301901)
chr1 (19-69)||(13761575-13761625)
chr1 (19-68)||(6822774-6822823)
chr1 (106-281)||(31423478-31423650)
chr1 (173-261)||(28202152-28202240)
chr1 (22-69)||(47177076-47177123)
chr1 (156-282)||(47179023-47179147)
chr1 (68-171)||(6997107-6997214)
chr1 (175-297)||(31423829-31423951)
chr1 (115-168)||(16430721-16430774)
chr1 (18-67)||(51749778-51749827)
chr1 (19-67)||(20291280-20291328)
chr1 (173-260)||(25127207-25127295)
chr1 (181-297)||(25249451-25249567)
chr1 (21-68)||(10400323-10400370)
chr1 (22-68)||(16225886-16225932)
chr1 (173-282)||(31736320-31736430)
chr1 (22-67)||(23783238-23783283)
chr1 (193-281)||(25127283-25127371)
chr1 (173-297)||(14098715-14098840)
chr1 (19-69)||(2617278-2617328)
chr1 (176-245)||(10742240-10742308)
chr1 (230-271)||(28997281-28997322)
chr1 (230-271)||(29002997-29003038)
chr1 (19-68)||(2401678-2401727)
chr1 (193-282)||(13548115-13548203)
chr1 (19-67)||(15823286-15823334)
chr1 (126-171)||(28221514-28221559)
chr1 (19-67)||(9521367-9521415)
chr1 (19-67)||(25133681-25133729)
[»] chr7 (55 HSPs)
chr7 (22-317)||(1047458-1047751)
chr7 (22-317)||(22136629-22136923)
chr7 (22-317)||(40551656-40551950)
chr7 (21-317)||(44065-44360)
chr7 (68-317)||(7349867-7350115)
chr7 (68-317)||(31156500-31156747)
chr7 (68-281)||(7092768-7092981)
chr7 (68-281)||(28487032-28487249)
chr7 (70-261)||(21679565-21679755)
chr7 (70-281)||(9680330-9680540)
chr7 (68-281)||(38395768-38395986)
chr7 (68-281)||(7470621-7470837)
chr7 (173-317)||(9680200-9680342)
chr7 (68-223)||(20298998-20299155)
chr7 (19-105)||(30246604-30246690)
chr7 (70-281)||(24815625-24815835)
chr7 (19-105)||(25409765-25409851)
chr7 (19-100)||(7074407-7074488)
chr7 (19-100)||(25405013-25405094)
chr7 (70-206)||(44726480-44726614)
chr7 (173-281)||(20298844-20298952)
chr7 (173-297)||(44726293-44726417)
chr7 (151-261)||(24815803-24815910)
chr7 (19-100)||(3320531-3320613)
chr7 (18-72)||(40837212-40837266)
chr7 (156-282)||(43909-44033)
chr7 (156-282)||(1047783-1047907)
chr7 (19-68)||(26804344-26804393)
chr7 (19-67)||(3878322-3878370)
chr7 (151-280)||(4509627-4509753)
chr7 (151-280)||(4511469-4511595)
chr7 (173-282)||(20298649-20298759)
chr7 (173-282)||(21679447-21679557)
chr7 (22-68)||(22107866-22107912)
chr7 (156-241)||(22136514-22136597)
chr7 (22-68)||(40549626-40549672)
chr7 (156-241)||(40551541-40551624)
chr7 (22-67)||(2935070-2935115)
chr7 (22-67)||(9027642-9027687)
chr7 (173-241)||(20298787-20298856)
chr7 (173-296)||(7470825-7470949)
chr7 (173-303)||(7092969-7093100)
chr7 (19-73)||(7464981-7465035)
chr7 (156-239)||(7350147-7350228)
chr7 (156-282)||(31156779-31156904)
chr7 (126-282)||(6067777-6067931)
chr7 (127-234)||(26214491-26214595)
chr7 (156-261)||(9680065-9680168)
chr7 (173-241)||(38395711-38395780)
chr7 (19-67)||(27306720-27306767)
chr7 (173-234)||(28486982-28487044)
chr7 (21-67)||(48457441-48457487)
chr7 (127-273)||(6048210-6048354)
chr7 (20-65)||(40946076-40946121)
chr7 (19-67)||(34547325-34547373)
[»] chr8 (30 HSPs)
chr8 (21-317)||(27828843-27829139)
chr8 (22-317)||(18812420-18812713)
chr8 (22-317)||(43081473-43081767)
chr8 (68-317)||(41384242-41384493)
chr8 (19-261)||(15072309-15072554)
chr8 (19-103)||(25684260-25684344)
chr8 (156-280)||(27828687-27828811)
chr8 (19-100)||(4812970-4813051)
chr8 (70-172)||(21482015-21482121)
chr8 (45-105)||(590428-590488)
chr8 (173-296)||(15072177-15072301)
chr8 (127-282)||(17849316-17849468)
chr8 (156-297)||(41384071-41384210)
chr8 (19-100)||(3275919-3276000)
chr8 (19-100)||(28332251-28332332)
chr8 (107-218)||(31574293-31574401)
chr8 (45-103)||(16753030-16753088)
chr8 (48-99)||(28895121-28895172)
chr8 (159-241)||(43081358-43081438)
chr8 (22-68)||(43079346-43079392)
chr8 (22-67)||(18810483-18810528)
chr8 (18-63)||(14807552-14807597)
chr8 (25-70)||(44720614-44720660)
chr8 (210-260)||(14418788-14418838)
chr8 (106-171)||(18959981-18960046)
chr8 (19-67)||(9021590-9021638)
chr8 (130-280)||(42435993-42436141)
chr8 (19-67)||(12517517-12517565)
chr8 (19-67)||(23180043-23180091)
chr8 (21-68)||(27826781-27826828)
[»] chr6 (34 HSPs)
chr6 (22-317)||(33310705-33310999)
chr6 (22-317)||(26066566-26066860)
chr6 (70-317)||(3395847-3396093)
chr6 (70-317)||(3630424-3630668)
chr6 (44-254)||(30729323-30729536)
chr6 (44-255)||(15533197-15533411)
chr6 (115-282)||(26944711-26944876)
chr6 (45-103)||(35209068-35209126)
chr6 (19-100)||(13883095-13883176)
chr6 (19-100)||(31249195-31249276)
chr6 (19-100)||(35201807-35201888)
chr6 (173-282)||(3630715-3630824)
chr6 (156-297)||(3395676-3395815)
chr6 (173-297)||(15533425-15533550)
chr6 (22-70)||(33308682-33308730)
chr6 (156-241)||(26066892-26066975)
chr6 (22-67)||(26068837-26068882)
chr6 (19-67)||(14507668-14507716)
chr6 (58-105)||(22344783-22344830)
chr6 (18-68)||(11983517-11983567)
chr6 (156-241)||(33310590-33310673)
chr6 (22-67)||(29755234-29755279)
chr6 (21-67)||(4816739-4816786)
chr6 (176-282)||(11137784-11137892)
chr6 (19-69)||(1230719-1230769)
chr6 (19-68)||(17695334-17695383)
chr6 (19-68)||(26064755-26064804)
chr6 (19-68)||(26084724-26084773)
chr6 (19-67)||(28241812-28241860)
chr6 (18-67)||(1072346-1072395)
chr6 (19-67)||(15530613-15530661)
chr6 (19-67)||(26642829-26642877)
chr6 (19-67)||(26748795-26748843)
chr6 (21-69)||(33215497-33215545)
[»] chr2 (38 HSPs)
chr2 (19-317)||(19502502-19502798)
chr2 (22-317)||(36559313-36559607)
chr2 (68-317)||(35216184-35216432)
chr2 (70-261)||(21518946-21519140)
chr2 (19-281)||(6259306-6259571)
chr2 (173-297)||(6259559-6259682)
chr2 (153-315)||(31733465-31733624)
chr2 (66-282)||(13828836-13829053)
chr2 (19-103)||(17943174-17943258)
chr2 (19-105)||(20050506-20050592)
chr2 (19-105)||(22712978-22713064)
chr2 (19-105)||(30478628-30478714)
chr2 (173-282)||(22405145-22405254)
chr2 (19-100)||(2740561-2740642)
chr2 (19-100)||(39686603-39686684)
chr2 (42-105)||(28462819-28462882)
chr2 (156-282)||(35216464-35216588)
chr2 (44-105)||(30262268-30262329)
chr2 (166-261)||(31733666-31733761)
chr2 (22-67)||(45332630-45332675)
chr2 (18-68)||(24162703-24162753)
chr2 (156-241)||(36559639-36559722)
chr2 (19-69)||(43624037-43624087)
chr2 (173-297)||(21519148-21519273)
chr2 (22-67)||(36561632-36561677)
chr2 (117-169)||(31733336-31733388)
chr2 (156-282)||(19502830-19502954)
chr2 (21-68)||(27104514-27104561)
chr2 (19-67)||(19504836-19504884)
chr2 (19-68)||(40032538-40032587)
chr2 (173-233)||(6259748-6259808)
chr2 (19-70)||(21521186-21521237)
chr2 (126-245)||(30262377-30262495)
chr2 (21-67)||(45280457-45280503)
chr2 (19-68)||(27518103-27518152)
chr2 (127-261)||(28568828-28568961)
chr2 (126-163)||(41303707-41303744)
chr2 (19-67)||(20055252-20055300)
[»] chr5 (54 HSPs)
chr5 (19-317)||(34477584-34477881)
chr5 (21-317)||(31544550-31544844)
chr5 (22-317)||(15355020-15355315)
chr5 (22-317)||(23666859-23667154)
chr5 (22-317)||(10756710-10757005)
chr5 (19-261)||(6746850-6747092)
chr5 (68-317)||(27911967-27912219)
chr5 (19-261)||(659516-659761)
chr5 (68-317)||(18509907-18510157)
chr5 (21-261)||(31466450-31466693)
chr5 (118-317)||(41586557-41586752)
chr5 (21-206)||(20504406-20504594)
chr5 (68-241)||(18468521-18468698)
chr5 (173-297)||(20504657-20504781)
chr5 (19-105)||(40222376-40222462)
chr5 (156-303)||(27911790-27911935)
chr5 (173-297)||(41586798-41586922)
chr5 (156-282)||(18510189-18510314)
chr5 (19-105)||(25452108-25452194)
chr5 (174-297)||(20044335-20044459)
chr5 (173-297)||(659383-659508)
chr5 (19-68)||(21684921-21684970)
chr5 (18-67)||(25921943-25921992)
chr5 (19-68)||(31179885-31179934)
chr5 (19-68)||(34479924-34479973)
chr5 (19-67)||(2174680-2174728)
chr5 (173-261)||(20044468-20044556)
chr5 (70-167)||(20044655-20044755)
chr5 (156-241)||(10756595-10756678)
chr5 (156-241)||(15355347-15355430)
chr5 (156-241)||(23666744-23666827)
chr5 (174-241)||(6746773-6746841)
chr5 (159-282)||(31544394-31544515)
chr5 (156-282)||(34477913-34478038)
chr5 (19-67)||(39797849-39797897)
chr5 (22-68)||(15357296-15357342)
chr5 (19-73)||(18186539-18186593)
chr5 (22-68)||(38960559-38960605)
chr5 (22-67)||(10749505-10749550)
chr5 (22-67)||(23664834-23664879)
chr5 (22-67)||(23793708-23793753)
chr5 (173-241)||(31466701-31466770)
chr5 (174-283)||(18468382-18468492)
chr5 (21-67)||(31542442-31542488)
chr5 (19-69)||(36402797-36402847)
chr5 (19-63)||(4236374-4236418)
chr5 (19-69)||(21947768-21947818)
chr5 (19-67)||(1240078-1240126)
chr5 (21-67)||(20507955-20508001)
chr5 (21-67)||(10529592-10529638)
chr5 (19-68)||(22672503-22672552)
chr5 (20-68)||(4409796-4409844)
chr5 (19-67)||(6744801-6744849)
chr5 (19-67)||(42237954-42238002)
[»] scaffold0140 (3 HSPs)
scaffold0140 (22-317)||(23940-24235)
scaffold0140 (156-241)||(23825-23908)
scaffold0140 (22-68)||(21914-21960)
[»] chr4 (69 HSPs)
chr4 (22-317)||(16932315-16932608)
chr4 (21-317)||(22044884-22045178)
chr4 (21-317)||(11006734-11007030)
chr4 (22-317)||(9174640-9174933)
chr4 (21-317)||(22780906-22781199)
chr4 (68-297)||(22132987-22133215)
chr4 (19-281)||(3825064-3825331)
chr4 (19-223)||(36920078-36920279)
chr4 (58-223)||(22801354-22801517)
chr4 (70-281)||(12401349-12401559)
chr4 (70-281)||(12396407-12396617)
chr4 (42-223)||(24880099-24880283)
chr4 (70-260)||(16454857-16455047)
chr4 (151-317)||(36379816-36379979)
chr4 (176-317)||(5100406-5100538)
chr4 (68-223)||(5100586-5100743)
chr4 (68-223)||(14788021-14788178)
chr4 (70-223)||(47564344-47564496)
chr4 (70-204)||(36380023-36380159)
chr4 (19-103)||(4884495-4884579)
chr4 (181-296)||(36920332-36920447)
chr4 (19-105)||(15316592-15316678)
chr4 (173-282)||(47564189-47564298)
chr4 (156-297)||(16932640-16932782)
chr4 (44-105)||(4569685-4569746)
chr4 (42-99)||(16638517-16638574)
chr4 (19-67)||(7941133-7941181)
chr4 (156-282)||(11007062-11007187)
chr4 (173-297)||(14788224-14788348)
chr4 (115-245)||(18535387-18535512)
chr4 (173-261)||(24879965-24880053)
chr4 (156-282)||(9174965-9175089)
chr4 (156-241)||(22045210-22045293)
chr4 (156-297)||(36379644-36379783)
chr4 (22-67)||(9176990-9177035)
chr4 (173-297)||(16454723-16454848)
chr4 (22-67)||(16934669-16934714)
chr4 (173-282)||(22801563-22801672)
chr4 (19-67)||(11434769-11434817)
chr4 (173-229)||(18535536-18535592)
chr4 (156-282)||(22781231-22781356)
chr4 (173-258)||(3825319-3825405)
chr4 (21-67)||(5637960-5638006)
chr4 (21-67)||(22783271-22783317)
chr4 (172-245)||(18535627-18535700)
chr4 (21-90)||(22048529-22048598)
chr4 (179-282)||(3577451-3577556)
chr4 (19-63)||(37089866-37089910)
chr4 (21-68)||(38408992-38409039)
chr4 (19-70)||(51015037-51015088)
chr4 (151-279)||(3577620-3577748)
chr4 (19-67)||(8528918-8528966)
chr4 (19-63)||(24888594-24888638)
chr4 (21-68)||(18846922-18846971)
chr4 (173-241)||(12396605-12396674)
chr4 (173-241)||(12401547-12401616)
chr4 (19-67)||(36921986-36922033)
chr4 (20-67)||(6764654-6764701)
chr4 (227-282)||(10114273-10114328)
chr4 (20-67)||(47868195-47868242)
chr4 (19-69)||(15311992-15312042)
chr4 (19-68)||(48486112-48486161)
chr4 (19-68)||(18586615-18586664)
chr4 (19-68)||(31300073-31300122)
chr4 (68-105)||(47747333-47747370)
chr4 (19-63)||(8631914-8631958)
chr4 (19-67)||(16489001-16489049)
chr4 (19-67)||(26086244-26086292)
chr4 (19-67)||(40636868-40636916)
[»] scaffold0250 (1 HSPs)
scaffold0250 (46-317)||(2391-2650)
[»] scaffold0025 (3 HSPs)
scaffold0025 (19-281)||(69785-70048)
scaffold0025 (173-297)||(70036-70161)
scaffold0025 (19-69)||(73496-73546)
[»] scaffold1674 (2 HSPs)
scaffold1674 (68-281)||(95-308)
scaffold1674 (173-245)||(296-369)
[»] scaffold0011 (2 HSPs)
scaffold0011 (70-223)||(35429-35579)
scaffold0011 (173-303)||(35253-35383)
[»] scaffold0005 (2 HSPs)
scaffold0005 (68-223)||(51552-51709)
scaffold0005 (173-297)||(51382-51506)
[»] scaffold1764 (1 HSPs)
scaffold1764 (19-105)||(1070-1156)
[»] scaffold0006 (1 HSPs)
scaffold0006 (240-317)||(189200-189278)
[»] scaffold0068 (1 HSPs)
scaffold0068 (19-68)||(28940-28989)
[»] scaffold0127 (1 HSPs)
scaffold0127 (20-67)||(13007-13054)
[»] scaffold0133 (3 HSPs)
scaffold0133 (179-255)||(4195-4271)
scaffold0133 (181-254)||(4292-4365)
scaffold0133 (106-236)||(4387-4512)
[»] scaffold0472 (1 HSPs)
scaffold0472 (22-67)||(5927-5972)
[»] scaffold0131 (1 HSPs)
scaffold0131 (21-66)||(14768-14814)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-67)||(41974-42022)
[»] scaffold0552 (1 HSPs)
scaffold0552 (20-67)||(1302-1349)
[»] scaffold0256 (1 HSPs)
scaffold0256 (19-67)||(15976-16024)


Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 19 - 338
Target Start/End: Original strand, 7606915 - 7607234
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7606915 ccatcgtgtcacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctcctt 7607014  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7607015 gctgctctttcccttgcttcccactactccaagtagctccacaagtttatacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 7607114  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctactg 318  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||     
T  7607115 cttgtagtccaactacgccaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctacta 7607214  T
Q  319 atccaccagctcttctctct 338  Q
    || |||||||||||||||||    
T  7607215 attcaccagctcttctctct 7607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 6063958 - 6064255
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  6063958 ccatcgtgccacgattctgcataaacctgattttaagttaattctcacaattctccaccttgacttcaaatcagtgatgatgtcgatcagcaacctcctt 6064057  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    |||||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||||||||||||||     
T  6064058 gctgctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatatcttccgccttctcgaagatg 6064156  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||    
T  6064157 cttgtagtccaactacactaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcctgctttccttgaagatctact 6064255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 46 - 317
Target Start/End: Complemental strand, 11170166 - 11169897
Alignment:
Q  46 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactac 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11170166 tgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccaatcatcaacctccttgctgctctttcccttgcttcccactac 11170067  T
Q  146 tccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 245  Q
    || |||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  11170066 tctaagtagctccacaagtttacacctc--aacctcttcagccatcggaatgtcttccgccttcatgaagatgcttgtagtccaactacgctaggaattt 11169969  T
Q  246 cagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||||||||||    
T  11169968 caggtagttctacaagactataccataacctcttcaataccagacatctcccgctttccttgaagatctact 11169897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 21 - 317
Target Start/End: Complemental strand, 5899505 - 5899210
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaag--ttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    ||||||||| |||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  5899505 atcgtgccatgattatgcagaaacctgattataagagttaactctcacaattctccaccttgacttcaaatcagtgacgatgccaatcattaacctcctt 5899406  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||     
T  5899405 gctgctatttcccttgcttcccactactccaagtaactccacaagtttacaccc--taacctcttcagccatcagaatgtcttccgccttctcgaagatg 5899308  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||  || |||||||||||||||    
T  5899307 cttgtagtccaactatgctaggaatttcagatagttctacaagactataccataccctcttcaattcgagatatctcccgctt-ccttgaagatctact 5899210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 24 - 317
Target Start/End: Original strand, 10956520 - 10956811
Alignment:
Q  24 gtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctg 122  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10956520 gtgccacgattcctgcagat-cctgattttaagttaactctcacaattatccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctg 10956618  T
Q  123 ctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttg 222  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||  | || |||||||||||||  ||||||||||||||||||||||||| ||||    
T  10956619 ctctttccattgcttcccactacaccatgtagctccacaagtttacac--cctagcctcttcagccattggaatgtcttccgccttctcgaagatgcttg 10956716  T
Q  223 tagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  10956717 tagtccaactacgctacgaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 10956811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 68 - 317
Target Start/End: Complemental strand, 457950 - 457702
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| ||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  457950 attctccaccttgactctaaattagtaatgatgccaatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 457851  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    ||| ||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  457850 cac-tctcaacctcttcagcgatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaagactata 457752  T
Q  268 ccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||| |||||||  || |||||||||||||||    
T  457751 ccataacctcttcaatacgagatatctcccgctttccttgaagatctact 457702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 4308771 - 4308992
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttg 119  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4308771 catcgtggcacgattctccagaattctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccttcttg 4308870  T
Q  120 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcc 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||    
T  4308871 ctgctctttcccttgcttcccactacaccaagtagctccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaaggtcc 4308970  T
Q  220 ttgtagtccaactacgctagga 241  Q
    ||| ||||||||||| ||||||    
T  4308971 ttgcagtccaactacactagga 4308992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 18097374 - 18097634
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  18097374 ccatcgtgccacgattttgcagaaacctgattttaagttaactctcacaattctccaccttgactttaaatcagggatgatgccaatcatcaaccacctt 18097473  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||| ||||||||||| ||||||||||| ||||||||||| ||    
T  18097474 gctgctctttcccttgcttcccactacaccaagtagctccacaagtttacacctcc--accccttcagccatcggaatgtcttccaccttctcgaaggtc 18097571  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    |||| |||||||||| ||||||||||| || |||||| |||||  |  ||| |||||||||||    
T  18097572 cttgcagtccaactaggctaggaattttaggtagttccacaagcattcaccttaacctcttca 18097634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 22 - 261
Target Start/End: Complemental strand, 43228077 - 43227838
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  43228077 tcgtggcacgattctccagaattctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttgct 43227978  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||| || ||||||||||||||||||||||| |||||    
T  43227977 gctctttcccttgcttcccactactccaagtatctccacaagtttacacctcatgaccccttcagccctcggaatgtcttccgccttctcgaaggtcctt 43227878  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    | ||||||||||| |||||||||| || |||||| |||||    
T  43227877 gcagtccaactacactaggaattttagttagttccacaag 43227838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 35918438 - 35918701
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||| ||||||||| || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  35918438 ccatcgtggcacgattctccataattctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccttctt 35918537  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||  ||    
T  35918538 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacccattcagccctcggaatgtcttccgccttctcgaaagtc 35918637  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    |||| ||||||||||| |||||| ||| || |||| | |||||  |  ||| ||||||||||||    
T  35918638 cttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccttaacctcttcaa 35918701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 68 - 317
Target Start/End: Complemental strand, 3306518 - 3306271
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttt 166  Q
    |||||||||||| |||  |||| |||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  3306518 attctccaccttaactctaaattagtgatgatgccaaaccatcaaccaccttgctgctctttcccttgcttcccactacacctagttgctccacaagttt 3306419  T
Q  167 acacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactat 266  Q
    |||||   |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  3306418 acaccc--taacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactactctaggaatttcaggtagttctacaagactat 3306321  T
Q  267 accataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||    
T  3306320 accataacctcttcaatacgagacatctcccgctt-ccttgaagatctact 3306271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 72 - 272
Target Start/End: Original strand, 43421975 - 43422172
Alignment:
Q  72 tccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacac 170  Q
    |||||||||||| ||||| |||||||||||||| | ||||||| |||||||||||||||||||  |||||||||| |||||||| ||||||| |||||||    
T  43421975 tccaccttgactccaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttccctta-ttcccactacaccaagtagttccacaaatttacac 43422073  T
Q  171 ctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatacca 270  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||    
T  43422074 -tct-aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt-gtccaactacactaggaatttcaggtagttctacaagactgtacca 43422170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 255
Target Start/End: Complemental strand, 42991953 - 42991762
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||| ||||||||||  |||| |||||||||||||||    |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  42991953 attcttcaccttgactctaaattagtgatgatgtcaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaag 42991854  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    |||||||||||||||| |||||||| ||  |||||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||    
T  42991853 tttacacctcttaaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggaattttaggtagttc 42991762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 28100600 - 28100810
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||||||| | ||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  28100600 tctccaccttgactctaaattagtgatgatgtcaaaccatcaaccaccatgctgctctttgccttgcttcccactacaccaagtagctccacaagtttac 28100699  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    ||||  ||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||| |||| ||| |||||| || |||||| |||||  |  ||    
T  28100700 acct--taaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactatgaattttaggtagttccacaagcattcac 28100797  T
Q  269 cataacctcttca 281  Q
    | |||||||||||    
T  28100798 cttaacctcttca 28100810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 28137833 - 28138043
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||| |||| | |||||||| ||| | ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28137833 tctccaccttgactttaaattaatgatgatgccaaaccatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 28137932  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    ||||  ||| | ||||||||||| ||||||||||| ||||||| ||| |||||| ||||||||||| |||| ||||| || |||||| |||||  |  ||    
T  28137933 acct--taatcccttcagccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacactagaaattttaggtagttccacaagcattcac 28138030  T
Q  269 cataacctcttca 281  Q
    | |||||||||||    
T  28138031 cttaacctcttca 28138043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 890310 - 890499
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  890310 tctccaccttgactctaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 890409  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtcca-actacgctaggaatttcagatagttctacaag 261  Q
    ||  | ||||||||||| ||||| ||||| |||||||| | | ||||||||||| |||||| ||||| | |||||||| || |||||| |||||    
T  890410 ac--cctaacctcttcaaccatcggaatgccttccgccct-ttgaagatccttg-agtccagactactcaaggaattttaggtagttccacaag 890499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 53916286 - 53916418
Alignment:
Q  183 tcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  53916286 tcagccatcggaatgtcttccgccttctcgaagatccttatagtccaactacgctaggaatttcaggtagttctacaagactataccat-acttcttcaa 53916384  T
Q  283 tacgagacatctcccatttcccttgaagatctact 317  Q
     ||  |||||||||   || |||||||||||||||    
T  53916385 cacaggacatctcctgctt-ccttgaagatctact 53916418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 890507 - 890649
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| ||||| ||||| ||||||| ||||| |||||| ||||||||||||||  ||||||| ||||||||||||||||||||||     
T  890507 cttaacctcttcagccatcggaatgccttcccccttctcaaagattcttgtaatccaactacgctagttatttcaggtagttctacaagactataccat- 890605  T
Q  273 acctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    || ||||||| ||  ||||||||||  || |||||||||||||||    
T  890606 acttcttcaacacatgacatctcccgctt-ccttgaagatctact 890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 10595493 - 10595579
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10595493 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 10595579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 54192945 - 54192861
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54192945 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 54192861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 47878633 - 47878719
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47878633 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 47878719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 53916450 - 53916589
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||||| |||| || ||||||    
T  53916450 tccacaagtatacacct--taaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttc 53916547  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     |||||  |  |||||||||||||||| ||  ||||||||||    
T  53916548 cacaagcattaaccataacctcttcaacacaggacatctccc 53916589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 10901446 - 10901362
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||| |||||| || ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10901446 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 10901362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 23636527 - 23636419
Alignment:
Q  174 ttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataa 273  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||||| || ||  |  |||||||    
T  23636527 ttaacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtatcgaaactacgctaggaatttcaggtagttccactagcattcaccataa 23636428  T
Q  274 cctcttcaa 282  Q
    |||||||||    
T  23636427 cctcttcaa 23636419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 16461901 - 16461815
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| |||||| || ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16461901 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 16461815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 10094576 - 10094631
Alignment:
Q  45 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10094576 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 10094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 53916090 - 53916239
Alignment:
Q  76 ccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacc 171  Q
    ||||||||  |||| |||||| ||||||||    |||||||| || |||||||||||||||||||||||||||  |||||||||| |||||||||||||     
T  53916090 ccttgactctaaattagtgataatgtcaatttaacatcaaccaccatgctgctctttcccttgcttcccactataccaagtagcttcacaagtttacac- 53916188  T
Q  172 tcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
     | ||||||||||| ||||| ||||| ||| |||| | | ||||||||||||    
T  53916189 -cctaacctcttcaaccatcggaatgcctttcgcccttttgaagatccttgt 53916239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 43422247 - 43422386
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||||||  |||||||||||||||||||||||||  |||||| |||||||||||||||| ||||| || ||||||    
T  43422247 tccacaagtatacacct--taaccccttcagctctcagaatgtcttccgccttctcgaatgtccttgcagtccaactacgctagaaattttaggtagttc 43422344  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     |||||  |  |||||||| ||||||| ||  ||||||||||    
T  43422345 cacaagcattcaccataacatcttcaacacaggacatctccc 43422386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 890705 - 890785
Alignment:
Q  181 cttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||| || |||||| |||||    
T  890705 cttcagccatcggaatgtcttccgccttctcgaagatccttgcagtcagactacgctaggaattttaggtagttccacaag 890785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 1619206 - 1619422
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat-----catcaacctcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||  |||| |||||| || |||||     |||||||| || ||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  1619206 tctccaccttgactctaaattagtgataatttcaatttaaccatcaaccaccattgttgctctttcccttgcttcccactacaccatgtagctccacaag 1619305  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaag---atccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
    ||| |||| ||  ||||||||| ||||| ||||| ||||||||||||| |||   ||||||| | ||||||||  |||||||||| || |||||| ||||    
T  1619306 ttttcacc-ct--acctcttcaaccatcggaatg-cttccgccttctctaagaccatccttgca-tccaactatactaggaattttaggtagttcgacaa 1619400  T
Q  261 gactataccat-aacctcttca 281  Q
    | ||| ||||| ||||||||||    
T  1619401 gtctacaccataaacctcttca 1619422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 10201462 - 10201517
Alignment:
Q  45 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10201462 ctgattttaagttaaatctcacaattctccaccttgacttcaaatcagtgatgatg 10201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 3316141 - 3316019
Alignment:
Q  181 cttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttc 280  Q
    |||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||| |||||| || |||||| |||||  |  |||||||| |||||    
T  3316141 cttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaagaattttaggtagttccacaagcattcaccataacatcttc 3316042  T
Q  281 aatacgagacatctcccatttcc 303  Q
    || |   ||||||||||| ||||    
T  3316041 aacataggacatctcccacttcc 3316019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 23636725 - 23636620
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||| ||||    |||||||  | ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  23636725 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaca-cattgctgctctttcccttgcttcccactacaccaagtagatccacaagtt 23636627  T
Q  166 tacacct 172  Q
    |||||||    
T  23636626 tacacct 23636620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 25388666 - 25388617
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25388666 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 25388617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 22114793 - 22114844
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22114793 accatcgtgccacgattctacagaaacctgattttaagttaactctcacaat 22114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 11169865 - 11169726
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||| ||  |||| ||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |    
T  11169865 tccacaagtatacacttc--aacccctttagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcc 11169768  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     |||||  |  |||||||| ||||||| || | |||||||||    
T  11169767 cacaagcattcaccataacatcttcaacacaaaacatctccc 11169726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 18099659 - 18099709
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18099659 ccatcgtgccacgattttgcagaaacctgattttaagttaactctcacaat 18099709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 38210112 - 38210066
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38210112 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 38210066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 50493722 - 50493676
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50493722 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 50493676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 53896708 - 53896754
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  53896708 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 3859365 - 3859312
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattct 72  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  3859365 ccatcgtgccacgattatgcagaaacctgattttaagttaactctcacatttct 3859312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 5899178 - 5899090
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 245  Q
    ||||||||| ||||||| | | || |||||||| || |||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  5899178 tccacaagtatacacct-taacccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacgctaggaattt 5899090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 6064287 - 6064412
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| ||||||||  |||| |||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  6064287 tccacaagtatacacctc--aaccccttcagtcatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 6064384  T
Q  255 ctacaagactataccataacctcttcaa 282  Q
    | |||||  |  |||||||| |||||||    
T  6064385 ccacaagctttcaccataacatcttcaa 6064412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 6066243 - 6066291
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6066243 ccatcgtgccacaattctgcagaaacctgattttaagttaactctcaca 6066291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 457670 - 457546
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  || | ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |    
T  457670 tccacaagtatacacctc--aaacacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcc 457573  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  457572 cacaagctttcaccataacatcttcaa 457546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 4309020 - 4309131
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  |||||    
T  4309020 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccat 4309119  T
Q  272 aacctcttcaat 283  Q
    ||| ||||||||    
T  4309120 aacatcttcaat 4309131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 10956843 - 10956926
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| ||||||||||| |||| |||||||||||||||||| |||||| |||| |||||| ||||||    
T  10956843 tccacaagtatacacctc--aaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtctaactacactagga 10956926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 42991748 - 42991638
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || || | | |||||  | ||||||    
T  42991748 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtactcccacaagcatttaccat 42991649  T
Q  272 aacctcttcaa 282  Q
    ||| |||||||    
T  42991648 aacatcttcaa 42991638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 5191419 - 5191374
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcac 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  5191419 atcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 18097622 - 18097691
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| ||||||    
T  18097622 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagga 18097691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 313
Target Start/End: Original strand, 35918688 - 35918828
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| |||||| ||||||||||| |||| | ||| || |||| | ||| |  |  |||||    
T  35918688 cttaacctcttcaaccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagaagttttaggtagtcccacacgcattcaccat 35918787  T
Q  272 aacctcttcaatacgagacatctcccatttcccttgaagatc 313  Q
    ||| |||||||| |  ||||||||||| || |||||||||||    
T  35918788 aacatcttcaatgcaggacatctcccactt-ccttgaagatc 35918828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 2075639 - 2075734
Alignment:
Q  126 tttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttg 222  Q
    |||||||||||||  ||||| |||||||||||||||||||| |||| |||  |||||||| || ||||||||||||||| | |||  ||||||||||    
T  2075639 tttcccttgcttctaactacaccaagtagctccacaagtttccacc-ctttgcctcttcaaccttcagaatgtcttccgtcctcttaaagatccttg 2075734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 28138031 - 28138093
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaag-atccttgtagtccaactac 234  Q
    ||||||||||||||||||| ||| |||||||| |||||||||| ||||||| |||||||||||    
T  28138031 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagaatccttgcagtccaactac 28138093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 43227830 - 43227720
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  |||||    
T  43227830 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccat 43227731  T
Q  272 aacctcttcaa 282  Q
    ||| |||||||    
T  43227730 aacatcttcaa 43227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 25635120 - 25635042
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccacta 144  Q
    ||||||||||||||  |||| |||||||||| ||||    |||||||| || |||||||||||||||||||||||||||    
T  25635120 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccacta 25635042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 35777208 - 35777163
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  35777208 tcgtgccacgattctgcagaaatctaattttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 5886029 - 5885981
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  5886029 atcgtgccacgattctgtaaaaacctaattttaagttaactctcacaat 5885981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 6719605 - 6719651
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||    
T  6719605 atcgtgccacgattaagcagaaacctgattttaagttaattctcaca 6719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 32218883 - 32218834
Alignment:
Q  20 catcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  32218883 catcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaat 32218834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5858245 - 5858196
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| ||||  |||||||||||||||||||||||||    
T  5858245 ccatcgtggcacgattctccagattcctgattttaagttaactctcacaa 5858196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 32264532 - 32264580
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  32264532 ccatcgtgccacgatttctgca-aaacctgattttaagttaactctcaca 32264580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 38889806 - 38889757
Alignment:
Q  19 ccatcgtgccacgattctgcagaaa-cctgattttaagttaactctcaca 67  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  38889806 ccatcgtaccacgattctgcagaaaacctaattttaagttaactctcaca 38889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27101749 - 27101797
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  27101749 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 27101797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 43225875 - 43225827
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  43225875 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 43225827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 51727495 - 51727543
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  51727495 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 51727543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26720316 - 26720267
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  26720316 ccatcgtgccacgattcctgcagat-cctgattttaagttaactctcacaa 26720267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 28100798 - 28100908
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||  ||| || ||||| ||||||||||| |||||  |||||||| || |||||  ||| || |||||| |||||  |  |||||    
T  28100798 cttaacctcttcagccattggaacgttttccgtcttctcgaagagtccttacagtccaacgacactaggtgttttaggtagttccacaagcattcaccat 28100897  T
Q  272 aacctcttcaa 282  Q
    |||||||||||    
T  28100898 aacctcttcaa 28100908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 43402814 - 43402940
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    |||| ||||||||||||||||| |  ||||||| |  | ||| |||| |||||||  ||| |||| |||||| | ||||||||| |||||| ||| || |    
T  43402814 gtagttccacaagtttacaccttt--acctcttgaaacctcataatgccttccgctctcttgaagttccttgca-tccaactacactaggatttttaggt 43402910  T
Q  251 agttctacaagactataccataacctcttc 280  Q
    ||||| ||||| ||| ||||||||||||||    
T  43402911 agttccacaagcctacaccataacctcttc 43402940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 48362137 - 48362186
Alignment:
Q  18 accatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  48362137 accatcgtgccacgatttctacagaa-cctgattttaagttaactctcaca 48362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10949762 - 10949811
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| |||| |||| ||||  |||||||||||||||||||||||||    
T  10949762 ccatcgtggcacgtttctccagattcctgattttaagttaactctcacaa 10949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25690845 - 25690894
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||  |||||  ||||||||||||||||||||||||    
T  25690845 ccatcgtggcacgattcatcagaattctgattttaagttaactctcacaa 25690894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9605102 - 9605150
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||  ||||||||| |||||  |||||||||||||||||||||||    
T  9605102 ccatcgtagcacgattctccagaattctgattttaagttaactctcaca 9605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27762509 - 27762557
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||||||||    
T  27762509 ccatcgtggcacgtttcttcagattcctgattttaagttaactctcaca 27762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 51752153 - 51751854
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51752153 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctcct 51752054  T
Q  118 tgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagat 217  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |    
T  51752053 tgctgctctttcccttgcttcccactactccaagtatctccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaaggt 51751954  T
Q  218 ccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  51751953 ccttgtagtccaactacgctagaaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccactttccttgaagatctact 51751854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 20302246 - 20301948
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  20302246 ccatcatgccgcgattctgcagaaatctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacatcctt 20302147  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20302146 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatc 20302047  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  20302046 cttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 20301948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 47179473 - 47179179
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  47179473 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 47179374  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||||| |||    
T  47179373 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacttcttcagccatcggaatgtcttccgccttctcgaagatgctt 47179275  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||  || |||||||||||||||    
T  47179274 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataaccttttcaatacgagatatcttccgctttccttgaagatctact 47179179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 36 - 317
Target Start/End: Complemental strand, 16228267 - 16227987
Alignment:
Q  36 tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgc 135  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||    
T  16228267 tgcagaaacctgattttaagttaactcttacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctcaaacccttgc 16228168  T
Q  136 ttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacg 235  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  16228167 ttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatttcttccgccttctcgaagatgcttgtagtccaactacg 16228069  T
Q  236 ctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  16228068 ctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgttttccttgaagatctact 16227987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 28842281 - 28842018
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcct 117  Q
    ||||||||||||||||| | ||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28842281 ccatcgtgccacgattcctacagat-cctgattttaagttaactttcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctcct 28842183  T
Q  118 tgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagat 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | ||| |||||||| || ||||||||||||||||||||||| |    
T  28842182 tgctgctatttcccttgcttcccactactccaagtagctccacaagttaacacctcatgaccccttcagccctcggaatgtcttccgccttctcgaaggt 28842083  T
Q  218 ccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    ||||| ||||||||||| |||||||||| || |||||| |||||  || |||||||| |||||||    
T  28842082 ccttgcagtccaactacactaggaattttaggtagttccacaagcgtacaccataacatcttcaa 28842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 14098462 - 14098706
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacc 113  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    ||||||||    
T  14098462 ccatcgtgccacgatttctgcagaatc-tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaacc 14098560  T
Q  114 tcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcg 212  Q
     || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||    
T  14098561 gccattgctgctctttcacttgcttcccactacaccaagtagctccacaagtttacaccc--taaccccttcagccatcggaatgtcttccgccttctcg 14098658  T
Q  213 aagatccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
    ||| |||||| ||||||||||| |||||||||| || |||||||||||    
T  14098659 aaggtccttgcagtccaactacactaggaattttaggtagttctacaa 14098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 31736115 - 31736332
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    |||||||| || |||||||||||||||||||||||| ||| |||||||||||||||||    
T  31736115 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccattacaccaagtagctccacaag 31736214  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    |||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||| |||||||||||| ||||||||| || |||| | |||||      
T  31736215 tttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgttaggaattttaggtagtcccacaagca 31736314  T
Q  264 tataccataacctcttca 281  Q
    |  ||| |||||||||||    
T  31736315 ttcaccttaacctcttca 31736332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 68 - 282
Target Start/End: Original strand, 27337532 - 27337748
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    ||| |||| || ||||||||||||||||| |||||||||| |||||||||||||||||    
T  27337532 attctccaccttgactctaaattagtgatgatgccaatttaacat-aaccaccatgctgctctttcccttg-ttcccactacaccaagtagctccacaag 27337629  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |||||||      
T  27337630 tttacacctcttaacctcttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcctacaagca 27337729  T
Q  264 tataccataacctcttcaa 282  Q
    |  |||||||| |||||||    
T  27337730 ttcaccataacatcttcaa 27337748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 151 - 315
Target Start/End: Complemental strand, 16430645 - 16430484
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    ||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||| ||||||||||||| |    
T  16430645 gtagctccacaagtacacacct--taacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtatccaaattacactaggaatttcaggt 16430548  T
Q  251 agttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatcta 315  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||| | | |||||||||||||    
T  16430547 agttctacaagactataccataacctctttaatacggaacatctccc-tcttccttgaagatcta 16430484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 50077395 - 50077538
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  50077395 cttaacctctttagccatcgaaatgtcttccgtcttctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaagactataccata 50077494  T
Q  273 acctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||| |||||  ||||||||||  || |||||||||||||||    
T  50077495 acctcttaaatacaggacatctcccgctt-ccttgaagatctact 50077538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 28201926 - 28202106
Alignment:
Q  46 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgcttccc 140  Q
    |||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||    |||||||| || |||| |||||||||||||||||||    
T  28201926 tgattttaagttaactctcacaattctccaccttgattttaaatcagcgatgatgccaatttaacatcaaccaccattgcagctctttcccttgcttccc 28202025  T
Q  141 actactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    ||||| ||||||||||||||||| ||||||  | ||||||||||| ||||||||||| |||||||| | | ||||||||||||    
T  28202026 actacaccaagtagctccacaaggttacac--cctaacctcttcaaccatcagaatgccttccgcccttttgaagatccttgt 28202106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 31423638 - 31423761
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||     
T  31423638 cttaacctcttcagccatcggaatgtcttccacattctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaagactataccat- 31423736  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| || |||||||||||    
T  31423737 acttcttcaacacaagacatctccc 31423761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 51751822 - 51751698
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    |||| |||| ||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  51751822 tccataagtatacacctc--aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaatttcaggtagttc 51751725  T
Q  256 tacaagactataccataacctcttcaa 282  Q
    ||||||  |  |||||||| |||||||    
T  51751724 tacaagcattcaccataacatcttcaa 51751698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 317
Target Start/End: Complemental strand, 8954197 - 8954034
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    ||||||||||||||  ||||||  |||||||||||| ||||  |||||||||| ||||||| || |||||||||  | ||||||  |||||||||||  |    
T  8954197 gtagctccacaagtacacacct--taacctcttcagtcatcgaaatgtcttccaccttctcaaaaatccttgtatccaaactacaataggaatttcacgt 8954100  T
Q  251 agttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||||||||   |||||||||  || |||||||||||||||    
T  8954099 agttctacaagactataccataacctcttcaatacagaacatctcccgctt-ccttgaagatctact 8954034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 8347833 - 8347970
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||| ||||    |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8347833 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaagtt 8347932  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgcc 206  Q
    ||||||    |||||||||| ||||| ||||| ||||||||    
T  8347933 tacacc---aaacctcttcaaccatcggaatgccttccgcc 8347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 13126198 - 13126306
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||| |||||| || |||||| ||||| ||| ||||||    
T  13126198 cttaacctcttcagccatcagaatgtcttccgccttgtcgaagatccttgca-tccaactacactaagaattttaggtagttccacaagtctacaccata 13126296  T
Q  273 acctcttcaa 282  Q
    ||||||||||    
T  13126297 acctcttcaa 13126306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 16430435 - 16430295
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||| || |||||| |||||  |  ||||||    
T  16430435 cttaaccccttcagccatcagaatgtgttccgccttctcgaaggtccttgcagtctaactacgctaggaattttaggtagttccacaagcattcaccata 16430336  T
Q  273 acctcttcaatacgagacatctcccatttcccttgaagatct 314  Q
    |||||||||| ||  ||||||||||  || ||||||||||||    
T  16430335 acctcttcaacacaggacatctcccgctt-ccttgaagatct 16430295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 50077195 - 50077387
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||| ||||    |||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  50077195 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccttgctgctctttccctta-ttcccactacaccaagtagctccacaagtt 50077293  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtcc-aactacgctaggaatttcagatagttctacaag 261  Q
    |||||  | ||||||||||| |||||  |||| |||||||| | | |||||||||||| |||| |||||| | |||||||| || |||||| |||||    
T  50077294 tacac--cctaacctcttcaaccatcgaaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaag 50077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 25249254 - 25249353
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||  | |||||| ||||||||||||| |||||||||||||||||| ||||    
T  25249254 cttaacctcttcagccatcggaatgtcttccgtcttcttgaagatccttgtatccaaactacactaggaatttcaggtagttctacaagactatatcata 25249353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 174 - 297
Target Start/End: Original strand, 50077586 - 50077709
Alignment:
Q  174 ttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataa 273  Q
    |||||| |||||||| |||||||||||||||||||||||||| |||||| | |||||||||||||||||||| || |||||| |||||  |  |||||||    
T  50077586 ttaaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcaatccaactacgctaggaattttaggtagttccacaagcattcaccataa 50077685  T
Q  274 cctcttcaatacgagacatctccc 297  Q
    | ||||||| ||| ||||||||||    
T  50077686 catcttcaacacgggacatctccc 50077709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 2393764 - 2393850
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2393764 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 2393850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 16227955 - 16227813
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| ||| || ||||     
T  16227955 tccacaagtatacacctcataaccacttcagccatcagaatatcttccgccttctcgaagagtccttgtagtccaactacactaggagttttaggtagtc 16227856  T
Q  255 ctacaagactataccataacctcttcaatacgagacatctccc 297  Q
    | |||||  |  |||||||| ||||||| ||  ||||||||||    
T  16227855 ccacaagcattcaccataacatcttcaacacaggacatctccc 16227813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 6997015 - 6996891
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||  | |||||||    
T  6997015 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcatttaccata 6996916  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  6996915 acatcttcaacacaggacatctccc 6996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 8954373 - 8954269
Alignment:
Q  72 tccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||   ||| |||||||| ||||||    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8954373 tccaccttgactcttaattagtgatgaagtcaatttaacatcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagttta 8954274  T
Q  168 cacct 172  Q
    |||||    
T  8954273 cacct 8954269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 13125998 - 13126210
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat-----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagt 164  Q
    |||||||||||||   |||| |||||||||| ||||     |||||| | |||||  |||||||||||||||||||| ||| ||| ||||||||||||||    
T  13125998 tctccaccttgacactaaattagtgatgatgccaatttaaccatcaatcaccttgacgctctttcccttgcttcccattacaccatgtagctccacaagt 13126097  T
Q  165 ttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagact 264  Q
    || ||||    |||||||||| |||||||| |  ||||| |||||| ||||||||||| | | |||||||||||||||||| || ||||||  |||| ||    
T  13126098 ttccacc---caacctcttcaaccatcagatttccttccaccttcttgaagatccttgca-tgcaactacgctaggaattttaggtagttccgcaagtct 13126193  T
Q  265 ataccataacctcttca 281  Q
    | ||| |||||||||||    
T  13126194 acaccttaacctcttca 13126210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 9526165 - 9526084
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9526165 ccatcgtggcacgatgctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 9526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 106 - 260
Target Start/End: Original strand, 25249093 - 25249245
Alignment:
Q  106 catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgc 205  Q
    |||| ||| ||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||  | |||||||||||  |||||||||| |||||||    
T  25249093 catcgaccaccttgctactcttttccttgcttcccagtacaccaagtagctccacaagtttacac--cctaacctcttcaatcatcagaatgccttccgc 25249190  T
Q  206 cttctcgaagatccttgtagtcc-aactacgctaggaatttcagatagttctacaa 260  Q
    | | | |||||||||||| |||| |||||| | |||||||| || |||||| ||||    
T  25249191 ccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaa 25249245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 25127593 - 25127438
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| ||| |||||||||||    |||||| | |||||||| | |||||||||||||||||||| ||| |||||| ||||||||    
T  25127593 tctccaccttgactctaaattagttatgatgtcaatttaacatcaatcgccttgctgttttttcccttgcttcccactacaccatgtagcttcacaagtt 25127494  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||  | ||||||||||| ||||| ||||| ||| |||| | | ||||||||||||    
T  25127493 tacac--cctaacctcttcaaccatcggaatgcctttcgcccttttgaagatccttgt 25127438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 261
Target Start/End: Complemental strand, 155448 - 155234
Alignment:
Q  48 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat-----catcaacctccttgctgctctttcccttgcttcccac 142  Q
    ||||| |||||| |||||  | ||||||||||||||  |||| |||||||||| ||||     |||||||| ||| | ||| |||||||||||| |||||    
T  155448 attttgagttaattctcaacaatctccaccttgactctaaataagtgatgatgccaatttaaccatcaaccacctcggtgccctttcccttgctccccac 155349  T
Q  143 tactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaa 242  Q
    ||| ||| |||||||||||||||| ||||    |||||||||| ||||| ||||| |||| ||||||| | ||||  ||| | ||||||||| |||||||    
T  155348 tacaccatgtagctccacaagtttccacc---caacctcttcaaccatcggaatgccttctgccttcttggagattattgca-tccaactacactaggaa 155253  T
Q  243 tttcagatagttctacaag 261  Q
    ||| || |||||| |||||    
T  155252 ttttaggtagttccacaag 155234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 20301901 - 20301777
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| |||||| || ||||||||||||||||||| || |||| | |||||  |  ||||||    
T  20301901 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagcccaactacgctaggaattttagttagtcccacaagcattcaccata 20301802  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || |||||||| | | |||||||||    
T  20301801 acatcttcaatgcaaaacatctccc 20301777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 13761625 - 13761575
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13761625 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 13761575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 6822823 - 6822774
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6822823 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 6822774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 281
Target Start/End: Original strand, 31423478 - 31423650
Alignment:
Q  106 catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgc 205  Q
    |||||||| || |||||||||||| |||| |||  ||||| ||||||||||||||||||||||||||  ||||||||| | ||||| |||||||||||||    
T  31423478 catcaaccaccatgctgctctttctcttgattct-actacaccaagtagctccacaagtttacacct--taacctctttaaccatcggaatgtcttccgc 31423574  T
Q  206 cttctcgaagatccttgtagtccaa-ctacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    | | | ||||||| |||| |||||| |||| | |||||||| || |||||| |||||   | ||| |||||||||||    
T  31423575 ccttttgaagatctttgt-gtccaaactactcaaggaattttaggtagttccacaagtacacaccttaacctcttca 31423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 28202152 - 28202240
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||||| ||||||||  | ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||    
T  28202152 cttaaccccttcagcccacggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaag 28202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 47177123 - 47177076
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177123 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 47177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 47179147 - 47179023
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |    
T  47179147 tccacaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcc 47179050  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  47179049 cacaagctttcaccataacatcttcaa 47179023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 6997214 - 6997107
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    |||||||| || ||||||||||| |||||||||||||||  |||||| ||| ||||||    
T  6997214 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccgtgctgctctttaccttgcttcccactataccaagttgcttcacaag 6997115  T
Q  164 tttacacc 171  Q
    ||||||||    
T  6997114 tttacacc 6997107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 175 - 297
Target Start/End: Original strand, 31423829 - 31423951
Alignment:
Q  175 taacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataac 274  Q
    ||||| |||||||| || ||||||||||||||||||||||| |||||  ||||||||||| |||| ||||| || |||||| |||||  |  |||||||     
T  31423829 taaccccttcagccctcggaatgtcttccgccttctcgaaggtccttacagtccaactacactagaaattttaggtagttccacaagcattcaccataat 31423928  T
Q  275 ctcttcaatacgagacatctccc 297  Q
    |||||||| ||  ||||||||||    
T  31423929 ctcttcaacacaggacatctccc 31423951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 16430774 - 16430721
Alignment:
Q  115 ccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  16430774 ccttgctgctctttcccttggttcccactacaccaagtagctccacaagtttac 16430721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 51749827 - 51749778
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51749827 accatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 20291328 - 20291280
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20291328 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 20291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 260
Target Start/End: Complemental strand, 25127295 - 25127207
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||| |||||| ||||||||||| |||||| ||| || |||||| ||||    
T  25127295 cttaacctcttcagccatcggaacgtcttccgccttcttgaagagtccttgcagtccaactacactaggagttttaggtagttccacaa 25127207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 25249451 - 25249567
Alignment:
Q  181 cttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttc 280  Q
    |||||||| || ||||||||| | ||||||||||| || ||| |||||||||||||||||||||| || |||||| |||||  |  |||||||| |||||    
T  25249451 cttcagccctcggaatgtctttcaccttctcgaaggtcgttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccataacatcttc 25249550  T
Q  281 aatacgagacatctccc 297  Q
    || ||  ||||||||||    
T  25249551 aacacaggacatctccc 25249567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 10400323 - 10400370
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10400323 atcgtgccacgattccgcagaaacctgattttaagttaactctcacaa 10400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 16225932 - 16225886
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16225932 tcgtgccacgattctgcagaaacctgattttaagttaactcttacaa 16225886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 31736320 - 31736430
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  |||||    
T  31736320 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccat 31736419  T
Q  272 aacctcttcaa 282  Q
    ||| |||||||    
T  31736420 aacatcttcaa 31736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 23783283 - 23783238
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23783283 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 25127371 - 25127283
Alignment:
Q  193 gaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||||||||| || |||||| |||||  |  ||| |||||||||||    
T  25127371 gaatgtcttccgccttctcgaaggtctttgcagtccaactacactaggaattttaggtagttccacaagcattcaccttaacctcttca 25127283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 14098715 - 14098840
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    |||||||| || ||||||| ||| ||||||||  |||||||||| |||||| ||||||||||| |||||| ||| || |||||| |||||  |  |||||    
T  14098715 cttaacctttttagccatcggaacgtcttccgttttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccat 14098814  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
    ||| ||||||| ||  ||||||||||    
T  14098815 aacatcttcaacacaggacatctccc 14098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 2617328 - 2617278
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||||    
T  2617328 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaat 2617278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 10742308 - 10742240
Alignment:
Q  176 aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 245  Q
    |||||||||| ||||| ||||| ||| |||||||| ||||||||||| | ||||||||| ||||||||||    
T  10742308 aacctcttcaaccatcggaatgcctttcgccttcttgaagatccttgca-tccaactacactaggaattt 10742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 28997281 - 28997322
Alignment:
Q  230 actacgctaggaatttcagatagttctacaagactataccat 271  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  28997281 actacgctaggaattttaggtagttctacaagactataccat 28997322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 29002997 - 29003038
Alignment:
Q  230 actacgctaggaatttcagatagttctacaagactataccat 271  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  29002997 actacgctaggaattttaggtagttctacaagactataccat 29003038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 2401678 - 2401727
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| ||||   ||||||||||||||||||||||||    
T  2401678 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaa 2401727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 13548115 - 13548203
Alignment:
Q  193 gaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    ||||| |||||||| ||| |||| |||||| | ||||||||  |||||| ||| || |||||| ||||| ||| ||||||||||||||||    
T  13548115 gaatgccttccgccctcttgaagttccttgca-tccaactaaactaggatttttaggtagttccacaagcctacaccataacctcttcaa 13548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 15823334 - 15823286
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  15823334 ccatcgtgccacgattcctgcagat-cctgattttaagttaactctcaca 15823286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 28221514 - 28221559
Alignment:
Q  126 tttcccttgcttcccactactccaagtagctccacaagtttacacc 171  Q
    |||||||||| ||| ||||| |||||||||||||||||| ||||||    
T  28221514 tttcccttgcatccaactacaccaagtagctccacaagtatacacc 28221559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 9521415 - 9521367
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  9521415 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 9521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 25133729 - 25133681
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||||||||    
T  25133729 ccatcgtgacacgtttctccagattcctgattttaagttaactctcaca 25133681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 1047458 - 1047751
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1047458 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgct 1047557  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| |||    
T  1047558 gctctttcccttgcttcccactactccaagtagctccacaagtttacac--cctaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 1047655  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  1047656 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 1047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 22136923 - 22136629
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22136923 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 22136824  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||    
T  22136823 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 22136725  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  22136724 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 22136629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 40551950 - 40551656
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40551950 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 40551851  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||    
T  40551850 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 40551752  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  40551751 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 40551656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 21 - 317
Target Start/End: Complemental strand, 44360 - 44065
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttg 119  Q
    ||||||||||||||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  44360 atcgtgccacgattcctgcagat-cttgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccaatcatcaacatccttg 44262  T
Q  120 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||||| |||||||||||||||| |    
T  44261 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacac--cctaacctctttagccatcggaatgtctaccgccttctcgaagatgc 44164  T
Q  220 ttgtagtccaactacgctaggaatttcagatagttc-tacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  44163 ttgtagtccaactacgctaggaatttcaggtagttcttacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 44065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 68 - 317
Target Start/End: Original strand, 7349867 - 7350115
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| |||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  7349867 attctccaccttgactctaaattagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 7349966  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    |||| || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  7349967 cacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattttaggtagttctacaagactata 7350065  T
Q  268 ccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||    
T  7350066 ccataacctcttcaatacgagacatctcccgctttccttgaagatctact 7350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 68 - 317
Target Start/End: Original strand, 31156500 - 31156747
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| |||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  31156500 attctccaccttgactctaaattagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 31156599  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    ||||   |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31156600 caccc--taacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaagactata 31156697  T
Q  268 ccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||| ||||| |  || |||||||||| ||||    
T  31156698 ccataacctcttcaatacgagatatctctcgctttccttgaagatatact 31156747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 7092768 - 7092981
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7092768 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttgttgctctttcccttgcttcccactacaccaagtagctccacaagttta 7092867  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||||  |  |    
T  7092868 cacctcataaccccttcagctctcagaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaattttaggtagttccacaagcattca 7092967  T
Q  268 ccataacctcttca 281  Q
    || |||||||||||    
T  7092968 ccttaacctcttca 7092981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 68 - 281
Target Start/End: Complemental strand, 28487249 - 28487032
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    ||||  || || |||||||||||||||||||||||||||| |||||||||||||||||    
T  28487249 attctccaccttgactctaaattagtgatgatgccaatttaacatcgtccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaag 28487150  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    ||||||||||| |||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||||      
T  28487149 tttacacctctaaaccccttcagccatcggaatattttccgccttctcgaaggtccttgtagtccaactacgctaggaattttaggtagttccacaagca 28487050  T
Q  264 tataccataacctcttca 281  Q
    |  ||| |||||||||||    
T  28487049 ttcaccttaacctcttca 28487032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 21679755 - 21679565
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtca-atcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||| |||| |||||||||| || | |||||||| || || ||||| |||||||||||||||| || ||||||||||||||||||||||    
T  21679755 tctccaccttgactttaaattagtgatgatgccacaccatcaaccaccatgttgctccttcccttgcttcccaccacaccaagtagctccacaagtttac 21679656  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    |||   ||||| ||||||||||| || |||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||| |||||    
T  21679655 accc--taaccccttcagccatcggattgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaag 21679565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 70 - 281
Target Start/End: Complemental strand, 9680540 - 9680330
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  9680540 tctccaccttgactctaaattagtgatgatgtcaaaccatcaacctccttgctgctctttcccttgcgtcgtactacaccaagtagctccacaagtttac 9680441  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtcc-aactacgctaggaatttcagatagttctacaagactata 267  Q
    ||  | ||||||||||||||||| ||||| |||||||| | | |||||||||||| |||| |||||| | |||||||| || ||||||||||||   |||    
T  9680440 ac--cctaacctcttcagccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttctacaagtacata 9680344  T
Q  268 ccataacctcttca 281  Q
    || |||||||||||    
T  9680343 ccttaacctcttca 9680330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 281
Target Start/End: Complemental strand, 38395986 - 38395768
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaa 162  Q
    ||||||||||||||||  |||| ||||||||||  |||    |||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||    
T  38395986 attctccaccttgactctaaattagtgatgatgctaatttaacatcaaccaccattgctgctctttcccttgcttcccactacaccaagtagcttcacaa 38395887  T
Q  163 gtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaaga 262  Q
    ||||||||||| |||||  ||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||     
T  38395886 gtttacacctcataaccctttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccacaagc 38395787  T
Q  263 ctataccataacctcttca 281  Q
     |  ||| |||||||||||    
T  38395786 attcaccttaacctcttca 38395768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 7470621 - 7470837
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  ||||  ||||||||| ||||    |||||||| || || |||||||||||||| |||||||||| |||||||||||||||||    
T  7470621 attctccaccttgactctaaatttgtgatgatgccaatttaacatcaaccaccatgatgctctttcccttg-ttcccactacaccaagtagctccacaag 7470719  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    |||||||||| || || |||||||| || ||||||||||||||||||||||| |||||| |||||||||||  ||||||||| || |||| | |||||      
T  7470720 tttacacctcatagccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacattaggaattttaggtagtaccacaagca 7470819  T
Q  264 tataccataacctcttca 281  Q
    |  ||| |||||||||||    
T  7470820 ttcaccttaacctcttca 7470837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 317
Target Start/End: Complemental strand, 9680342 - 9680200
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||||||     
T  9680342 cttaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaattatgctaggaatttcaggtagttctacaagactataccat- 9680244  T
Q  273 acctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
     | ||||||| ||  ||||||||||  || |||||||||||||||    
T  9680243 gcttcttcaacacaggacatctcccgctt-ccttgaagatctact 9680200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 20299155 - 20298998
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    |||||||| || ||||||||||||||||||||||||| || |||||||||||||||||    
T  20299155 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccacgacaccaagtagctccacaag 20299056  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||||  | | ||||||||| ||||| ||||| |||||||| | | ||||||||||||    
T  20299055 tttacac--cctgacctcttcaaccatcggaatgccttccgcccttttgaagatccttgt 20298998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 30246690 - 30246604
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30246690 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 30246604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 24815625 - 24815835
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||||||||    |||||||| || ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  24815625 tctccaccttgactctaaattagtgatgatgtcaatttaacatcaaccaccatgctgatctttcccttgctttccactacaccaagtagctccacaagtt 24815724  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagacta 265  Q
    |||||||    |||| |||| ||||| ||| | |||||||||| | |||||| |||| | |||||||||||||||||||| || ||| || |||||   |    
T  24815725 tacacctt---acctgttcaaccatccgaacgccttccgccttgt-gaagattcttgca-tccaactacgctaggaattttaggtagctccacaagtaca 24815819  T
Q  266 taccataacctcttca 281  Q
     ||| |||||||||||    
T  24815820 caccttaacctcttca 24815835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 25409851 - 25409765
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  25409851 ccatcgtggcacgattctccagatttctgattttaagttaacttttacaattctccaccttgacttcaaatcagtgatgatgtcaat 25409765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7074488 - 7074407
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7074488 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 7074407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 25405094 - 25405013
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25405094 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 25405013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 206
Target Start/End: Complemental strand, 44726614 - 44726480
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||| ||| | ||||||  |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  44726614 tctccaccttgactctaaattagtgatgatgccaaaccatcaactaccttgctgctctttcccttg-ttcccactacaccaagtagctccacaagattac 44726516  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgcc 206  Q
    ||  | | ||||||||| ||||| ||||| ||||||||    
T  44726515 ac--cctgacctcttcaaccatcggaatgccttccgcc 44726480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 20298952 - 20298844
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||  |  ||| ||    
T  20298952 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcacctta 20298853  T
Q  273 acctcttca 281  Q
    |||||||||    
T  20298852 acctcttca 20298844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 44726417 - 44726293
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| || ||| ||||||||||| |||||||||| || |||||| |||||  |  ||||||    
T  44726417 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtcattgcagtccaactacactaggaattttaggtagttccacaagcattcaccata 44726318  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  44726317 acatcttcaacacaggacatctccc 44726293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 24815803 - 24815910
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    ||||||||||||||  ||||||  ||||||||||||||||| |||||| |||||||||||||||| |||||| |  |||||||| |||||||||| || |    
T  24815803 gtagctccacaagtacacacct--taacctcttcagccatcggaatgtattccgccttctcgaaggtccttgca-cccaactacactaggaattttaggt 24815899  T
Q  251 agttctacaag 261  Q
    |||||||||||    
T  24815900 agttctacaag 24815910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3320531 - 3320613
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaact-ctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3320531 ccatcgtggcacgatgctccagatttctgattttaagttaacttctcacaattctccaccttgacttcaaatcagtgatgatg 3320613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 40837212 - 40837266
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattct 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40837212 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacagttct 40837266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 44033 - 43909
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |    
T  44033 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcc 43936  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  43935 cacaagcattcaccataacatcttcaa 43909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 1047783 - 1047907
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| |    
T  1047783 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcc 1047880  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  1047881 cacaagcattcaccataacatcttcaa 1047907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26804393 - 26804344
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26804393 ccatcgtgccacgattctgtagaaacctgattttaagttaactctcacaa 26804344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 3878370 - 3878322
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3878370 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 4509627 - 4509753
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    |||| ||||||||||| ||||| |  |||||||||  | || ||||| |||||||||||| |||| |||||| | ||||||||| |||||| ||| ||||    
T  4509627 gtagttccacaagttttcaccttt--acctcttcaaacttcggaatgccttccgccttcttgaagttccttgca-tccaactacactaggatttttagat 4509723  T
Q  251 agttctacaagactataccataacctcttc 280  Q
    ||||| ||||| ||| ||||||||||||||    
T  4509724 agttccacaagcctacaccataacctcttc 4509753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 280
Target Start/End: Original strand, 4511469 - 4511595
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    |||| ||||||||||| ||||| |  |||||||||  | || ||||| |||||||||||| |||| |||||| | ||||||||| |||||| ||| ||||    
T  4511469 gtagttccacaagttttcaccttt--acctcttcaaacttcggaatgccttccgccttcttgaagttccttgca-tccaactacactaggatttttagat 4511565  T
Q  251 agttctacaagactataccataacctcttc 280  Q
    ||||| ||||| ||| ||||||||||||||    
T  4511566 agttccacaagcctacaccataacctcttc 4511595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 20298759 - 20298649
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  |||||    
T  20298759 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccat 20298660  T
Q  272 aacctcttcaa 282  Q
    ||| |||||||    
T  20298659 aacatcttcaa 20298649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 21679557 - 21679447
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    |||||||||||| |||||| ||| |||| ||||||||||||||| |||||| ||||||||||| |||||||||| |  |||||| |||||  |  |||||    
T  21679557 cttaacctcttctgccatcggaacgtctcccgccttctcgaagagtccttgcagtccaactacactaggaattttatgtagttcgacaagcattcaccat 21679458  T
Q  272 aacctcttcaa 282  Q
    ||| |||||||    
T  21679457 aacatcttcaa 21679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 22107912 - 22107866
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  22107912 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 22107866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22136597 - 22136514
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || |||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  22136597 tccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 22136514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 40549672 - 40549626
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  40549672 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 40549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 40551624 - 40551541
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || |||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  40551624 tccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 40551541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 2935115 - 2935070
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  2935115 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 9027642 - 9027687
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9027642 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 20298856 - 20298787
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| ||||||    
T  20298856 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagga 20298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 7470825 - 7470949
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| | | |||||| ||||||||||| || |||| | |||||  |  |||||    
T  7470825 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcacttcaactatgctaggaattttaggtagtcccacaagcattcaccat 7470924  T
Q  272 aacctcttcaatacgagacatctcc 296  Q
    ||| ||||||| ||  |||||||||    
T  7470925 aacatcttcaacacaggacatctcc 7470949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 303
Target Start/End: Original strand, 7092969 - 7093100
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||| | ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  |||||    
T  7092969 cttaacctcttcagccatcggaacgtcttcggtcttctcgaagagtccttgcagtccaactacactaggatttttaggtagtcccacaagcattcaccat 7093068  T
Q  272 aacctcttcaatacgagacatctcccatttcc 303  Q
    ||| |||||||  |  ||||||||||| ||||    
T  7093069 aacatcttcaacgcaggacatctcccacttcc 7093100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7464981 - 7465035
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctc 73  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||||||||    
T  7464981 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaattctc 7465035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 7350147 - 7350228
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctag 239  Q
    ||||||||| ||||||||  || | |||||||| |  ||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  7350147 tccacaagtatacacctc--aatcccttcagcccttggaatgtcttccgccttctcgaaggtccttgcagtccaactacactag 7350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 31156779 - 31156904
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| ||||||||  |||| ||||||||||| |||| ||||||||  ||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  31156779 tccacaagtatacacctc--aaccccttcagccatcggaatatcttccgcactctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 31156876  T
Q  255 ctacaagactataccataacctcttcaa 282  Q
    | |||||  |  |||||||| |||||||    
T  31156877 ccacaagctttcaccataacatcttcaa 31156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 6067777 - 6067931
Alignment:
Q  126 tttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaag---atccttg 222  Q
    |||||||| ||||| ||||| ||  |||||||||||||||| ||||    |||||||||| ||||| |||||||||||||||||| ||||   |||||||    
T  6067777 tttcccttccttccaactacacct-gtagctccacaagtttccaccc---aacctcttcaaccatcggaatgtcttccgccttcttgaagaccatccttg 6067872  T
Q  223 tagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
     | ||||||||| |||| ||||| || || || |||||| ||| || ||||||| |||||    
T  6067873 ca-tccaactacactagaaattttaggtaattttacaagtctacacaataacctattcaa 6067931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 26214595 - 26214491
Alignment:
Q  127 ttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagt 226  Q
    |||| |||||||| ||||| ||||||||||||| ||| || |||| |||  |||||||| ||||||||||| |||||||||| | |||| |||||||| |    
T  26214595 ttcctttgcttccaactacaccaagtagctccataagcttccacc-cttg-cctcttcaaccatcagaatgacttccgcctttttgaagttccttgta-t 26214499  T
Q  227 ccaactac 234  Q
    ||||||||    
T  26214498 ccaactac 26214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 9680168 - 9680065
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||| ||| ||  |||||||||| ||||||||||| |||||| ||||  |||||||||| ||||| || ||||||    
T  9680168 tccacaagtatacacct--taaccccttcggccctcgtaatgtcttccaccttctcgaaggtccttgcagtcagactacgctagaaattttaggtagttc 9680071  T
Q  256 tacaag 261  Q
     |||||    
T  9680070 cacaag 9680065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 38395780 - 38395711
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||||||||||| ||| ||||||   ||||||||||| |||||| ||||||||||| ||||||    
T  38395780 cttaacctcttcagccatcggaacgtcttctctcttctcgaagagtccttgcagtccaactacactagga 38395711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27306720 - 27306767
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  27306720 ccatcgtgccacgattttgca-aaaccttattttaagttaactctcaca 27306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 28487044 - 28486982
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactac 234  Q
    ||||||||||||||||||| ||| |||||||| |||||| |||| ||||||  ||||||||||    
T  28487044 cttaacctcttcagccatcggaacgtcttccgtcttctctaagagtccttgcggtccaactac 28486982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 48457487 - 48457441
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||||    
T  48457487 atcgtggcacgattctccagaattctgattttaagttaactctcaca 48457441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 6048354 - 6048210
Alignment:
Q  127 ttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaag---atccttgt 223  Q
    ||||||||||| | ||||| | | ||||||||||||| || ||||    |||||||| | ||||| ||||| |||||||||||| ||||   |||||||     
T  6048354 ttcccttgctttcaactacacaatgtagctccacaagcttccaccc---aacctctttaaccatcggaatgccttccgccttcttgaagaccatccttgc 6048258  T
Q  224 agtccaactacgctaggaatttcagatagttctacaagactataccataa 273  Q
    | ||||||||| ||||| |||| || |||||||||||| ||| |||||||    
T  6048257 a-tccaactacactagg-attttaggtagttctacaagtctacaccataa 6048210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 40946121 - 40946076
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctca 65  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||    
T  40946121 catcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 34547325 - 34547373
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  34547325 ccatcgtgacacgattctccagatttctgattttaagttaactctcaca 34547373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 21 - 317
Target Start/End: Complemental strand, 27829139 - 27828843
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttg 119  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27829139 atcgtgccacgattcctgcagat-cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacatccttg 27829041  T
Q  120 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27829040 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatcc 27828941  T
Q  220 ttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||  ||||||||||||||    
T  27828940 ttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgaaacatctcccgcttaacttgaagatctact 27828843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 18812713 - 18812420
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18812713 tcgtgccacgattcttcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgct 18812614  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||| |||||||||||||||||| |||||| |||    
T  18812613 gctctttcccttgcttcccactactccaagtagctccacaagtttacac--cctaacctctccagccatcggaatgtcttccgccttcttgaagatgctt 18812516  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||    
T  18812515 gtagtccaactacgctaggaatttaaggtagttctacaagactataccataatctcttcaatacgagacatctcccgctttccttgaagatctact 18812420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 43081767 - 43081473
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||    
T  43081767 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccgatcatcaacctcctttct 43081668  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||| ||||||||||||||||||||||||| |||    
T  43081667 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagtaatcggaatgtcttccgccttctcgaagatgctt 43081569  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  43081568 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 43081473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 68 - 317
Target Start/End: Complemental strand, 41384493 - 41384242
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaa 162  Q
    ||||||||||||||||  |||| |||||||||||||||    |||||||  || ||| ||||||||||||||||||||||||| |||||||||| |||||    
T  41384493 attctccaccttgactctaaattagtgatgatgtcaatttaacatcaacaaccattgttgctctttcccttgcttcccactacaccaagtagcttcacaa 41384394  T
Q  163 gtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaaga 262  Q
    |||||||||   ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||||    
T  41384393 gtttacaccc--taacctcttcagccatcggaatgtcttccgccttctcgaagatgtttgtagtccaactacgctagaaatttcaggtagttctacaaga 41384296  T
Q  263 ctataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||| ||||  || |||||||||||||||    
T  41384295 ctataccataacctcttcaatacgagacatatcccgctt-ccttgaagatctact 41384242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 15072554 - 15072309
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacc 113  Q
    |||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    ||||||||    
T  15072554 ccatcgtgtcacgattcctgcagaatc-tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatctaacatcaacc 15072456  T
Q  114 tcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcg 212  Q
     || |||||| | | |||||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||| |||| ||||||| |||||||    
T  15072455 accattgctgttatctcccttgcttcccactacaccaagtagctccacaagtttaca-ctc-taaccccttcagccatcggaatatcttccgtcttctcg 15072358  T
Q  213 aagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||| |||||| ||||||||||| |||||||||| || |||||| |||||    
T  15072357 aaggtccttgcagtccaactacactaggaattttaggtagttccacaag 15072309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 25684344 - 25684260
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||| |||||| || ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684344 ccatcgtggcacgatgctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 25684260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 280
Target Start/End: Complemental strand, 27828811 - 27828687
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||| ||||| |||||||| || |||||||||| |||||||||||| |||||||||||||||||| |||||||||| || |||| |    
T  27828811 tccacaagtatacacctcataaccccttcagccctcggaatgtcttctgccttctcgaaggtccttgtagtccaactacactaggaattttaggtagtcc 27828712  T
Q  256 tacaagactataccataacctcttc 280  Q
     |||||  | ||||||||| |||||    
T  27828711 cacaagcatttaccataacatcttc 27828687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 4812970 - 4813051
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4812970 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 4813051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 21482121 - 21482015
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||| ||||    |||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  21482121 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccatgtagctccacaagtt 21482022  T
Q  166 tacacct 172  Q
    |||||||    
T  21482021 tacacct 21482015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 590488 - 590428
Alignment:
Q  45 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  590488 ctgattttaagttaactctcacaattcttcaccttgacttcaaatcagtgatgatgtcaat 590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 15072301 - 15072177
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || ||||||||||||  |  |||||    
T  15072301 cttaacctcttcagccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttctacaagcattcaccat 15072202  T
Q  272 aacctcttcaatacgagacatctcc 296  Q
    ||| ||||||| ||  |||||||||    
T  15072201 aacatcttcaacacaggacatctcc 15072177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 127 - 282
Target Start/End: Complemental strand, 17849468 - 17849316
Alignment:
Q  127 ttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagt 226  Q
    ||||||||||||| ||||| ||||||| |||||||||||| ||  || |  |||||||| ||||| ||||| |||||||||||| ||||||||||| | |    
T  17849468 ttcccttgcttccaactacaccaagtatctccacaagtttcca--tccttgcctcttcaaccatcggaatgccttccgccttcttgaagatccttgca-t 17849372  T
Q  227 ccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    |||||||| |||||||||| || |||||| ||||| ||| |||| | |||||||||    
T  17849371 ccaactacactaggaattttaggtagttccacaagtctacaccaaaccctcttcaa 17849316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 41384210 - 41384071
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| |||||| | |||||||||||||||||||||||||| |||||| |||| |||||||||||| |||| || ||||||    
T  41384210 tccacaagtatacacctc--aaccccttcagtcctcagaatgtcttccgccttctcgaaggtccttgaagtctaactacgctaggtattttaggtagttc 41384113  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     |||||  |  |||||||| ||||||| ||  ||||||||||    
T  41384112 cacaagcattcaccataacatcttcaacacaggacatctccc 41384071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3276000 - 3275919
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||| |||| ||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3276000 ccatcgtggcacgtttctccagatttctgattttaagttaactctcgcaattctccaccttgacttcaaatcagtgatgatg 3275919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 28332332 - 28332251
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28332332 ccatcgtggcacgatgctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagcgatgatg 28332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 31574293 - 31574401
Alignment:
Q  107 atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgcc 206  Q
    ||||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||||| ||||    |||||||||| || ||  |||||||||||||    
T  31574293 atcaaccaccttgctgctctttccctcgcttccaactacaccaagtagctccacaagtttccacc---caacctcttcaaccttcgaaatgtcttccgcc 31574389  T
Q  207 ttctcgaagatc 218  Q
    |||| |||||||    
T  31574390 ttcttgaagatc 31574401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 16753030 - 16753088
Alignment:
Q  45 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  16753030 ctgattttaagttaagtctcacaattctccaccttgacttcaaattagtgatgatgtca 16753088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 28895172 - 28895121
Alignment:
Q  48 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatgat 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28895172 attttaagttaagtctcacaattctccaccttgacttcaaatcagtgatgat 28895121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 43081438 - 43081358
Alignment:
Q  159 acaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    |||||| ||||||||  |||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  43081438 acaagtatacacctc--aaccacttcagccatcagaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 43081358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 43079392 - 43079346
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43079392 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 43079346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 18810528 - 18810483
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18810528 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 14807597 - 14807552
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactct 63  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  14807597 accatcatgccacgattctgcagaaacctgattttaagttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 44720660 - 44720614
Alignment:
Q  25 tgccacgattctgcagaaa-cctgattttaagttaactctcacaatt 70  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  44720660 tgccacgattctgcagaaaacctgattttaagttaactctcacaatt 44720614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 14418788 - 14418838
Alignment:
Q  210 tcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
    ||||||||||||| | ||||||||||||||||||||||  |||||||||||    
T  14418788 tcgaagatccttgcaatccaactacgctaggaatttcatgtagttctacaa 14418838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 18960046 - 18959981
Alignment:
Q  106 catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacc 171  Q
    |||||||| |||| ||||||||||||||||||| ||||||  || ||||||||| |||||| ||||    
T  18960046 catcaaccacctttctgctctttcccttgcttctcactacatcatgtagctccagaagtttccacc 18959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9021590 - 9021638
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  9021590 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 9021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 280
Target Start/End: Original strand, 42435993 - 42436141
Alignment:
Q  130 ccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtcca 229  Q
    |||||| ||| ||||| ||||||||||||||||| || ||||  |  ||||||||| || || ||||| || ||||  ||| ||||||||||| | ||||    
T  42435993 ccttgcgtccaactacaccaagtagctccacaagcttccacccttgtacctcttcaaccctcggaatgcctcccgctctcttgaagatccttgca-tcca 42436091  T
Q  230 actacgctaggaatttcagatagttctacaagactataccataacctcttc 280  Q
    || || ||||| |||| || |||||| ||||| ||  ||||||||||||||    
T  42436092 accacactagg-attttaggtagttccacaagtctccaccataacctcttc 42436141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 12517517 - 12517565
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  12517517 ccatcgtgccacgattcctgcagat-cctgattttaagttaactctcaca 12517565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 23180043 - 23180091
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||  ||||||||| ||||  ||||||||||||||||||||||||    
T  23180043 ccatcgtagcacgattctccagattcctgattttaagttaactctcaca 23180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 27826828 - 27826781
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  27826828 atcgtgccacgattcctgcagat-cctgattttaagttaactctcacaa 27826781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 33310999 - 33310705
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  33310999 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 33310900  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||    
T  33310899 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 33310801  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  33310800 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 33310705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 26066566 - 26066860
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  26066566 tcgtgccacgattctacagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 26066665  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||| |||    
T  26066666 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttcctccttctcgaagatgctt 26066764  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||    
T  26066765 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctctttaatacgagacatctcccgctttccttgaagatctact 26066860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 70 - 317
Target Start/End: Complemental strand, 3396093 - 3395847
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  3396093 tctccaccttgactctaaattagtgatgatgtcaaaccaccaaccaccttgctgctctttcccttgcttcccactacaccaagtatctccacaagtttac 3395994  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    |||   ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3395993 accc--taacctcttcagccatcggaatgtcttctgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaagactatac 3395896  T
Q  269 cataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||    
T  3395895 cataacctcttcaatacgagacatctcccgctttccttgaagatctact 3395847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 70 - 317
Target Start/End: Original strand, 3630424 - 3630668
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  |||| |||||||||| ||| | |||||||  |||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3630424 tctccaccttgactcaaaattagtgatgatgccaaaccatcaaccaacttgttgctctttcccttg-ttcccactacaccaagtagctccacaagtttac 3630522  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    |||   ||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||     
T  3630523 accc--taacctctttagccatcggaatgtcttccgccttctcaaagatccttgtagttcaactacactaggaatttcaggtagttctacaagactataa 3630620  T
Q  269 cataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||| ||||||||||| ||||||||||  || |||||||||||||||    
T  3630621 cataacatcttcaatacgtgacatctcccgctt-ccttgaagatctact 3630668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 44 - 254
Target Start/End: Original strand, 30729323 - 30729536
Alignment:
Q  44 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgcttc 138  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    |||||||| || ||||||||||||||||||||||    
T  30729323 cctgatattaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctctttcccttgcttc 30729422  T
Q  139 ccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgcta 238  Q
    | ||||| |||| |||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||    
T  30729423 ctactacaccaaatagctccacaagtttacac--tttaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacacta 30729520  T
Q  239 ggaatttcagatagtt 254  Q
    ||||||| || |||||    
T  30729521 ggaattttaggtagtt 30729536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 44 - 255
Target Start/End: Original strand, 15533197 - 15533411
Alignment:
Q  44 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgcttc 138  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || |    |||||||| || ||| ||||||||||||||||||    
T  15533197 cctgattttaagttaactctcacaattctccaccatgacttcaaataagtgatgatgccactttaacatcaaccaccattgttgctctttcccttgcttc 15533296  T
Q  139 ccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgcta 238  Q
    ||||||| |||||||||||||||| ||||||||    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||     
T  15533297 ccactacaccaagtagctccacaaatttacacccg--aaccccttcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacactt 15533394  T
Q  239 ggaatttcagatagttc 255  Q
    ||||||| || ||||||    
T  15533395 ggaattttaggtagttc 15533411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 26944876 - 26944711
Alignment:
Q  115 ccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaa 214  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| ||||  |||| |  ||||| |||||||||||  |||| |||||||||| |||||    
T  26944876 ccttcctgctctttcccttgcttcccactacaccatgtagctccataagtacacacat--taaccccttcagccatcgaaatgccttccgccttttcgaa 26944779  T
Q  215 gatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    | |||||| |||||||||| ||||||||||| || |||||| |||||  |  ||||||||||||||||    
T  26944778 ggtccttgcagtccaactatgctaggaattttaggtagttccacaagtatccaccataacctcttcaa 26944711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 35209068 - 35209126
Alignment:
Q  45 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35209068 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 35209126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 13883176 - 13883095
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13883176 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 13883095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 31249195 - 31249276
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31249195 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 31249276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 35201807 - 35201888
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35201807 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 35201888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 3630715 - 3630824
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| ||  |||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||| |||||  |  ||||||    
T  3630715 cttaaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccata 3630814  T
Q  273 acctcttcaa 282  Q
    || |||||||    
T  3630815 acatcttcaa 3630824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 3395815 - 3395676
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||||||| || ||||||||||||||||||||||| |||||| |||||||||||  ||||||||| || ||||||    
T  3395815 tccacaagtatacacct--taaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaggtagttc 3395718  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     ||||   |  |||||||| ||||||| ||  ||||||||||    
T  3395717 cacaaacattcaccataacatcttcaacacaggacatctccc 3395676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 15533425 - 15533550
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    |||||||||||||||| || ||| |||||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||||| |||||  |  |||||    
T  15533425 cttaacctcttcagccctcggaacgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccat 15533524  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
     || ||||||| || |||||||||||    
T  15533525 gacatcttcaacacaagacatctccc 15533550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 33308730 - 33308682
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaatt 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33308730 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaatt 33308682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 26066892 - 26066975
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| ||||||||||| |||||||||||| |||||||||| |||||| ||||||||||| ||||||    
T  26066892 tccacaagtatacacctc--aaccccttcagccatcggaatgtcttccgtcttctcgaaggtccttgcagtccaactacactagga 26066975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26068837 - 26068882
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26068837 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 14507668 - 14507716
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14507668 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 22344783 - 22344830
Alignment:
Q  58 aactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22344783 aactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 22344830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11983517 - 11983567
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11983517 accatcgtaccacgattctgcagaaacctgattttaagttaactcttacaa 11983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 33310673 - 33310590
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || |||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  33310673 tccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 33310590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 29755234 - 29755279
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  29755234 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 4816739 - 4816786
Alignment:
Q  21 atcgtgccacgattctgcagaaa-cctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4816739 atcgtgccacgattctgcagaaaacctgattttaagttaactctcaca 4816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 11137892 - 11137784
Alignment:
Q  176 aacctcttcagccatcagaatgtcttccgccttctcgaag---atccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    |||||||||| ||||| ||||| |||||||||||  ||||   ||||||| | ||||||||| |||||||||| || |||||| ||||| ||| ||||||    
T  11137892 aacctcttcaaccatcggaatgccttccgccttcatgaagaccatccttgca-tccaactacactaggaattttaggtagttccacaagtctacaccata 11137794  T
Q  273 acctcttcaa 282  Q
    ||| ||||||    
T  11137793 accacttcaa 11137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 1230719 - 1230769
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||||    
T  1230719 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaat 1230769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 17695334 - 17695383
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  17695334 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaa 17695383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26064804 - 26064755
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  26064804 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaa 26064755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26084773 - 26084724
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  26084773 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaa 26084724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 28241812 - 28241860
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  28241812 ccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 28241860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 1072346 - 1072395
Alignment:
Q  18 accatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  1072346 accatcgtaccacgatttctgcagaa-cctgattttaagttaactctcaca 1072395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 15530613 - 15530661
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  15530613 ccatcgtgccacgattcctgcagat-cctgattttaagttaactctcaca 15530661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26642877 - 26642829
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||||||||    
T  26642877 ccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 26642829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26748843 - 26748795
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||||||||    
T  26748843 ccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 26748795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 33215545 - 33215497
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||| ||||||||| ||||   |||||||||||||||||||||||||    
T  33215545 atcgtggcacgattctccagatttctgattttaagttaactctcacaat 33215497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 19502502 - 19502798
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  19502502 ccatcgtgccacgattctgcagaaacctgattttaagttaactatcacaattctccaccttgaattcaaatcagtgataatgccaatcatcaacctcctt 19502601  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||     
T  19502602 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacac--cctaacctcttcagccatcggaatgtcttccgccttctcgaagatg 19502699  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  19502700 cttgtagtccaactacgctaggagtttcaggtagctctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 19502798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 36559313 - 36559607
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  36559313 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 36559412  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||    
T  36559413 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 36559511  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  36559512 gtagtccaactacactaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 36559607  T

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Target: chr2; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 68 - 317
Target Start/End: Original strand, 35216184 - 35216432
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  35216184 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 35216283  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    |||| || ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35216284 cacc-ctcaacttcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaagactata 35216382  T
Q  268 ccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||| |||||||  || |||||||||||||||    
T  35216383 ccataacctcttcaatacgagatatctcccgctttccttgaagatctact 35216432  T

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Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 70 - 261
Target Start/End: Original strand, 21518946 - 21519140
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc----atcaacctcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagt 164  Q
    ||||||| ||||||||||||||||||||||| |||||    ||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||| |    
T  21518946 tctccacattgacttcaaatcagtgatgatgccaatctaacatcaaccaccattgctgctctttcccttgcttcccactacaccaagtagctgcacaatt 21519045  T
Q  165 ttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||||||  ||||| ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||    
T  21519046 ttacacct--taaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaag 21519140  T

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Target: chr2; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 6259306 - 6259571
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacc 113  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||    ||||||||    
T  6259306 ccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcttaattctccaccttgactttaaatcagtgatgatgccaatttaacatcaacc 6259404  T
Q  114 tcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcg 212  Q
     || ||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||   ||||||||||| ||||| ||||| |||| ||| | | |    
T  6259405 accattgatgctctttcccttgcttcccactataccatgtagctccacaagtttacaccc--taacctcttcaaccatcggaatgccttctgcccttttg 6259502  T
Q  213 aagatccttgtagtccaa-ctacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    ||||||||||| |||||| |||| | |||||||| || |||||| |||||   | ||| |||||||||||    
T  6259503 aagatccttgt-gtccaaactactcaaggaattttaggtagttccacaagtgcacaccttaacctcttca 6259571  T

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Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 6259559 - 6259682
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| ||||||||||||||||||||||     
T  6259559 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtatccaaactacactaggaatttcaggtagttctacaagactataccat- 6259657  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  6259658 acttcttcaacacaggacatctccc 6259682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 315
Target Start/End: Original strand, 31733465 - 31733624
Alignment:
Q  153 agctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatag 252  Q
    ||||||||||||  ||||||  ||||||||| ||||||| |||||||||| ||||||||||||| |||||||  | |||||| ||||||||||||| |||    
T  31733465 agctccacaagtacacacct--taacctctttagccatcggaatgtcttctgccttctcgaagaaccttgtatccaaactacactaggaatttcaggtag 31733562  T
Q  253 ttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatcta 315  Q
    ||||||||||||||| |||||||||||||||||   |||||||||  || |||||||||||||    
T  31733563 ttctacaagactatatcataacctcttcaatacagaacatctcccgctt-ccttgaagatcta 31733624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 282
Target Start/End: Original strand, 13828836 - 13829053
Alignment:
Q  66 caattctccaccttgacttcaaatcagtgatgatgtcaat-----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccac 160  Q
    ||||||||||||||||||  ||||  ||||||||||||||     |||||||| || || || |||||||||||||||| ||||| |||||||||||||     
T  13828836 caattctccaccttgactctaaatttgtgatgatgtcaatttaaccatcaaccaccatgatgttctttcccttgcttccaactacaccaagtagctccat 13828935  T
Q  161 aagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
     ||||| ||||    ||||| |||| |||||||||||||||||||||||| |||||| |||| | ||||||||| |||| ||||| || |||||| ||||    
T  13828936 gagtttccaccc---aaccttttcaaccatcagaatgtcttccgccttcttgaagattcttgca-tccaactacactagaaattttagttagttccacaa 13829031  T
Q  261 gactataccataacctcttcaa 282  Q
    |  || ||||||||||||||||    
T  13829032 gtatacaccataacctcttcaa 13829053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 17943258 - 17943174
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17943258 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 17943174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 20050506 - 20050592
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20050506 ccatcgtggcacgattctccagaattttgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 20050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 22712978 - 22713064
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22712978 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 22713064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 30478714 - 30478628
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30478714 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 30478628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 22405145 - 22405254
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||||||| || |||||| |||||  |  ||||||    
T  22405145 cttaacctcttcagccatcggaatggcttccgccttctcgaagatccttgaagtccaactacactaggaattttaggtagttccacaagcattcaccata 22405244  T
Q  273 acctcttcaa 282  Q
    || |||||||    
T  22405245 acatcttcaa 22405254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 2740642 - 2740561
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2740642 ccatcgtggcacgatactccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 2740561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 39686684 - 39686603
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 100  Q
    |||||||| |||||| || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39686684 ccatcgtggcacgatgctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatg 39686603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 28462819 - 28462882
Alignment:
Q  42 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  28462819 aacctgattttaagttaactttcataattctccaccttgacttcaaatcagtgatgatgtcaat 28462882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 35216464 - 35216588
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||| |||| |    
T  35216464 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagtttcaggtagtcc 35216561  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  35216562 cacaagcattcaccataacatcttcaa 35216588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 30262268 - 30262329
Alignment:
Q  44 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  30262268 cctgattttaagttaactctcacaattctccacctcgacttcaaatcaatgatgatgccaat 30262329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 31733666 - 31733761
Alignment:
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||| ||||||| |||| ||||||| ||||||||||| ||||||| ||| |||||| |||||||||||||||| ||||| || |||||| |||||    
T  31733666 tacacatcttaacttctttagccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacgctagaaatttgaggtagttccacaag 31733761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 45332630 - 45332675
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45332630 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 24162703 - 24162753
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  24162703 accattgtgccacgattctgcagaaacttgattttaagttaactctcacaa 24162753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 36559639 - 36559722
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || |||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  36559639 tccacaagtatacacctc--aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 36559722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 43624037 - 43624087
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  43624037 ccatcgtgccatgattctgcagaaacctgattttaagttaactttcacaat 43624087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 21519148 - 21519273
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||| ||||||| ||| |||||| | ||||||||||| |||||| ||||||||||| |||||| ||| || |||||| |||||  |  |||||    
T  21519148 cttaacctctttagccatcggaacgtcttctgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccat 21519247  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
    ||| ||||||| ||  ||||||||||    
T  21519248 aacatcttcaacacaggacatctccc 21519273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 36561632 - 36561677
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  36561632 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 31733336 - 31733388
Alignment:
Q  117 ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttaca 169  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||    
T  31733336 ttgctgctctttcccttgctttccactacaccatgtagctccacaagtttaca 31733388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 19502830 - 19502954
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||||  |||| |||||||| || |||||||||||||||||| |||| | |||| ||||||||||| |||||| ||| || |||| |    
T  19502830 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttcttgaaggttcttgcagtccaactacactaggagttttaggtagtcc 19502927  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  19502928 cacaagcattcaccataacatcttcaa 19502954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 27104561 - 27104514
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  27104561 atcgtgccacgattctgcagaaatctgattttaagttaactcttacaa 27104514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 19504836 - 19504884
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  19504836 ccatcgtgccatgattctgctgaaacctgattttaagttaactttcaca 19504884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 40032538 - 40032587
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  40032538 ccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaa 40032587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 6259748 - 6259808
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaacta 233  Q
    ||||||| |||||||| || |||| |||||| ||||||||||| |||||| ||||||||||    
T  6259748 cttaaccccttcagccctcggaatatcttccaccttctcgaaggtccttgcagtccaacta 6259808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 21521186 - 21521237
Alignment:
Q  19 ccatcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaatt 70  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||||    
T  21521186 ccatcgtgccacgattcctgtagaa-cctgattttaagttaactctcacaatt 21521237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 30262377 - 30262495
Alignment:
Q  126 tttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtag 225  Q
    ||||||||| |||| ||||| ||| |||| |||||||  || ||||  ||  |||||||| ||||||||||  ||||||||| || ||||||||||| |     
T  30262377 tttcccttggttccaactacaccatgtagttccacaaccttccaccctttttcctcttcaaccatcagaataccttccgcctacttgaagatccttgca- 30262475  T
Q  226 tccaactacgctaggaattt 245  Q
    ||||||||| |||| |||||    
T  30262476 tccaactacactagaaattt 30262495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 45280457 - 45280503
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||||    
T  45280457 atcgtggcacgattctccagaattctgattttaagttaactctcaca 45280503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 27518103 - 27518152
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| |||||   |||||||||||||||||||||||    
T  27518103 ccatcgtggcacgattctccagaattttgattttaagttaactctcacaa 27518152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 261
Target Start/End: Original strand, 28568828 - 28568961
Alignment:
Q  127 ttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaag---atccttgt 223  Q
    |||||||| || | ||||| ||||||||||||||||| || ||||    |||||||||| |||   ||||| |||||||||||| ||||   |||||||     
T  28568828 ttcccttgtttacaactacaccaagtagctccacaagcttccacc---caacctcttcaaccactggaatgccttccgccttcttgaagaccatccttgc 28568924  T
Q  224 agtccaactacgctaggaatttcagatagttctacaag 261  Q
    | ||||||||| |||||||||| |  ||||||||||||    
T  28568925 a-tccaactacactaggaattttacgtagttctacaag 28568961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 41303707 - 41303744
Alignment:
Q  126 tttcccttgcttcccactactccaagtagctccacaag 163  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  41303707 tttcccttgcttccaactacaccaagtagctccacaag 41303744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 20055252 - 20055300
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| || |||||| |||||  |||||||||||||||||||||||    
T  20055252 ccatcgtggcatgattctccagaattctgattttaagttaactctcaca 20055300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 34477584 - 34477881
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  34477584 ccatcgtgccacgattctgcagaaacttgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctcctt 34477683  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    |||||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||     
T  34477684 gctgctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatg 34477782  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  34477783 cttgtagtccaactacgctaggaatttcaggtagtcctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 34477881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 317
Target Start/End: Complemental strand, 31544844 - 31544550
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgc 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  31544844 atcgtgccacgattttgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttgc 31544745  T
Q  121 tgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcct 220  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||| ||    
T  31544744 tgctcaaacccttgcttcccactactccaagtagctccacaagtttacac--cctaacctcttcagccatcggaatgtcttccgccttctcgaagatgct 31544647  T
Q  221 tgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  31544646 tgtagtccaactacgctaggaatttcaggtggttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 31544550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 15355020 - 15355315
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15355020 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 15355119  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |||    
T  15355120 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-atcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 15355218  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagac-tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  15355219 gtagtccaactacgctaggaatttcaggtagttctacaagacttataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 15355315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 23667154 - 23666859
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  23667154 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 23667055  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |||    
T  23667054 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-atcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 23666956  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagac-tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  23666955 gtagtccaactacgctaggaatttcaggtagttctacaagacttataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 23666859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 10757005 - 10756710
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  10757005 tcgtgctacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 10756906  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||    
T  10756905 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 10756807  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagac-tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  10756806 gtagtccaactacgctaggaatttcaggtagttctacaagacttataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 10756710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 6747092 - 6746850
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6747092 ccatcgtggcacgattctccagaattctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctcctt 6746993  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||    
T  6746992 gttgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaaccccttcagccctcagaatgtcttccgccttctcgaaggtc 6746893  T
Q  219 cttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    |||  |||||||||||||||||||||| || |||||| |||||    
T  6746892 cttacagtccaactacgctaggaattttaggtagttccacaag 6746850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 68 - 317
Target Start/End: Complemental strand, 27912219 - 27911967
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||||||||    |||||||  |  |||||||||||||||||||||||||||| |||||||||||||||||    
T  27912219 attctccaccttgactctaaattagtgatgatgtcaatttaacatcaacacctatgctgctctttcccttgcttcccactacaccaagtagctccacaag 27912120  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  27912119 tttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtcaaactacgctaggaatttcaggtagttctacaagac 27912020  T
Q  264 tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  27912019 tataccataacctcttcaatacgagacatctccca-ctaccttgaagatctact 27911967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 659761 - 659516
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacc 113  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    ||||||||    
T  659761 ccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaattctccaccttgacttcaaatcagggatgatgccaatttaacatcaacc 659663  T
Q  114 tcc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcg 212  Q
     || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||| ||||| ||||| ||||||||||||||||||||    
T  659662 accattgctgctctttccattgcttcccactacaccaagtagctccacaagtttacac--cttaaccccttcaaccatcggaatgtcttccgccttctcg 659565  T
Q  213 aagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||| |||||| ||||||||||| |||||||||| || |||||| |||||    
T  659564 aaggtccttgcagtccaactacactaggaattttaggtagttccacaag 659516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 68 - 317
Target Start/End: Original strand, 18509907 - 18510157
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||| |||| |||||||||| ||||    |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  18509907 attctccaccttgactttaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaag 18510006  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagac 263  Q
    |||||||||  ||||||||||| ||||| ||||| |||||||| | | |||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  18510007 tttacacct--taacctcttcaaccatcggaatgccttccgcccttttgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaatac 18510104  T
Q  264 tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||| ||  ||| |||||| ||| |||||||||||||||    
T  18510105 tataccataacctcttcaacacaggacctctcccgttt-ccttgaagatctact 18510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 21 - 261
Target Start/End: Original strand, 31466450 - 31466693
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctc 115  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    |||||||| |    
T  31466450 atcgtgccacgattcctgca-aaacctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccac 31466548  T
Q  116 c-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaa 214  Q
    | ||| || |||||||||||||||||||||| |||||||||||||||| |||||||  | ||||| ||||||||||||||||||||||||||||||||||    
T  31466549 cattgttgttctttcccttgcttcccactacaccaagtagctccacaaatttacac--cctaaccccttcagccatcagaatgtcttccgccttctcgaa 31466646  T
Q  215 gatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    | |||||| |||||||||||  ||||||||| || |||||| |||||    
T  31466647 ggtccttgcagtccaactacaataggaattttaggtagttccacaag 31466693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 118 - 317
Target Start/End: Original strand, 41586557 - 41586752
Alignment:
Q  118 tgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagat 217  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||| ||||| ||||| |||||||||||| ||||||    
T  41586557 tgctgctctttcccttgcttcccactacaccaagtagctccacaagtttacaccc--taacctcttcaaccatcggaatgccttccgccttcttgaagat 41586654  T
Q  218 ccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| |   ||||||||||  || |||||||||||||||    
T  41586655 gcttgtagtccaactacgctaggaatttcaggtagttctacaagactataccat-acttcttcaacataggacatctcccgctt-ccttgaagatctact 41586752  T

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Target: chr5; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 206
Target Start/End: Original strand, 20504406 - 20504594
Alignment:
Q  21 atcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctc 115  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    |||||||| |    
T  20504406 atcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccac 20504504  T
Q  116 c-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgcc 206  Q
    | ||||| |||| ||||||||||| |||||| ||||||||||||||||||||||||  | ||||||||||| ||||| ||||| ||||||||    
T  20504505 cattgctactctctcccttgcttcgcactacgccaagtagctccacaagtttacac--cctaacctcttcaaccatcggaatgccttccgcc 20504594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 241
Target Start/End: Complemental strand, 18468698 - 18468521
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| |||||||||| ||||    |||||||| || | |||||||||||||||||||||||||| |||||||||||||||||    
T  18468698 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatactgctctttcccttgcttcccactacaccaagtagctccacaag 18468599  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    |||||| ||| ||||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||| || ||||||    
T  18468598 tttacagctcataaccccttcagccctcggaatgtcttccgccttctcaaaggtccttgtagtccaacaacactagga 18468521  T

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Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 20504657 - 20504781
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||  |  ||||||    
T  20504657 cttaacctcttcagccatcagaatgtcttcctccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccata 20504756  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    |||||||||| ||  ||||||||||    
T  20504757 acctcttcaacacaggacatctccc 20504781  T

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Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 40222462 - 40222376
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40222462 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 40222376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 303
Target Start/End: Complemental strand, 27911935 - 27911790
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||||||| || ||||||||||||||||||||||| |||||| |||| |||||| |||||||||| || ||||||    
T  27911935 tccacaagtatacacct--taaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtctaactacactaggaattttaggtagttc 27911838  T
Q  256 tacaagactataccataacctcttcaatacgagacatctcccatttcc 303  Q
     |||||  |  |||||||| ||||||| ||  ||||||||||| ||||    
T  27911837 cacaagcattcaccataacatcttcaacacaggacatctcccagttcc 27911790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 41586798 - 41586922
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||  |  ||||||    
T  41586798 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccata 41586897  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  41586898 acatcttcaacacaggacatctccc 41586922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 18510189 - 18510314
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| ||||||| | |||| ||||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||| |||| || ||||||    
T  18510189 tccacaagtatacacct-taaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttc 18510287  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  18510288 cacaagcattcaccataacatcttcaa 18510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 25452194 - 25452108
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| || |   || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25452194 ccatcgtggcacgattctccatatttctaattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 20044459 - 20044335
Alignment:
Q  174 ttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||| | ||| || |||||| |||||  |  ||||||    
T  20044459 ttaacctcttcagccatcaaaatgtcttccgccttctcgaagagtccttgcagtccaactacactagaagttttaggtagttccacaagcattcaccata 20044360  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  20044359 acatcttcaacacaggacatctccc 20044335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 659508 - 659383
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||| |||||| ||| || |||||| ||||   |  |||||    
T  659508 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggagttttaggtagttccacaaacattcaccat 659409  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
    ||| ||||||| ||  ||||||||||    
T  659408 aacatcttcaacacaggacatctccc 659383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 21684921 - 21684970
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21684921 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 21684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 25921943 - 25921992
Alignment:
Q  18 accatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25921943 accatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 25921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 31179885 - 31179934
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31179885 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 31179934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34479924 - 34479973
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34479924 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 34479973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 2174728 - 2174680
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2174728 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 20044556 - 20044468
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||| | |||||||| || |||||| |||||    
T  20044556 cttaaccccttcagccatcggaatgacttccgccttctcgaaggtccttgcagtccaactacaccaggaattttaggtagttccacaag 20044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 20044755 - 20044655
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| ||||||| || ||||    ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20044755 tctccaccttgactctaaattagtgatggtgccaatttaacatcaacatc-ttgctgctctttcccttgcttcccactacaccaagtagctccacaagtt 20044657  T
Q  166 ta 167  Q
    ||    
T  20044656 ta 20044655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 10756678 - 10756595
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| ||||||    
T  10756678 tccacaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactagga 10756595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 15355347 - 15355430
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  15355347 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagga 15355430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 23666827 - 23666744
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  23666827 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagga 23666744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 6746841 - 6746773
Alignment:
Q  174 ttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    |||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  6746841 ttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacgctagga 6746773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 31544515 - 31544394
Alignment:
Q  159 acaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctac 258  Q
    |||||| ||||||||  |||| ||||||||||| |||| |||||||||||||||||| |||||| ||||||||||| |||||| ||| || |||| | ||    
T  31544515 acaagtatacacctc--aaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagtcccac 31544418  T
Q  259 aagactataccataacctcttcaa 282  Q
    |||  |  |||||||| |||||||    
T  31544417 aagctttcaccataacatcttcaa 31544394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 34477913 - 34478038
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| ||||||||  |||| ||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  34477913 tccacaagtatacacctc--aaccacttcagctatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 34478010  T
Q  255 ctacaagactataccataacctcttcaa 282  Q
    | |||||  |  |||||||| |||||||    
T  34478011 ccacaagctttcaccataacatcttcaa 34478038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 39797897 - 39797849
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39797897 ccatcgtgccacgattatgcagaaacctgattttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 15357296 - 15357342
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  15357296 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 15357342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18186539 - 18186593
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctc 73  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||    
T  18186539 ccatcgtaccacgattctgcagaaacttgattttaagttaactctcacatttctc 18186593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 38960559 - 38960605
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38960559 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 38960605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 10749550 - 10749505
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10749550 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 23664879 - 23664834
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23664879 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 23793708 - 23793753
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  23793708 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23793753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 31466701 - 31466770
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||||||||||||||| ||||||    
T  31466701 cttaacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactagga 31466770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 18468492 - 18468382
Alignment:
Q  174 ttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    |||||||||||||||||| |||  ||||||| ||||||||||| |||||| ||||||||||| |||||| ||| || |||| | |||||  |  ||||||    
T  18468492 ttaacctcttcagccatcggaacatcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagtcccacaagcattcaccata 18468393  T
Q  273 acctcttcaat 283  Q
    || ||||||||    
T  18468392 acatcttcaat 18468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 31542488 - 31542442
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31542488 atcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 36402797 - 36402847
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  36402797 ccatcgtgcctagattctgcagaaacctaattttaagttaactctcacaat 36402847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 4236418 - 4236374
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactct 63  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  4236418 ccatcgtgccacaattctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 21947818 - 21947768
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21947818 ccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaat 21947768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 1240126 - 1240078
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  1240126 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 20507955 - 20508001
Alignment:
Q  21 atcgtgccacgatt-ctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20507955 atcgtgccacgatttctgcagaa-cctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 10529592 - 10529638
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||| ||||||||| |||||  |||||||||||||||||||||||    
T  10529592 atcgtggcacgattctccagaattctgattttaagttaactctcaca 10529638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 22672552 - 22672503
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| |||||  || |||||||||||||||||||||    
T  22672552 ccatcgtggcacgattctccagaattctaattttaagttaactctcacaa 22672503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 4409844 - 4409796
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||| ||||||||| |||||  ||||||||||||||||| ||||||    
T  4409844 catcgtggcacgattcttcagaactctgattttaagttaactttcacaa 4409796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 6744849 - 6744801
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||| ||||||||||||    
T  6744849 ccatcgtggcacgattctccagaattctgattttaaattaactctcaca 6744801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 42238002 - 42237954
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  42238002 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 42237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 225; Significance: 1e-124; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 24235 - 23940
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24235 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 24136  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||| |||    
T  24135 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-atcaacctcttcagccatcggaatgtcttccgccttctcgaagatgctt 24037  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagac-tataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  24036 gtagtccaactacgctaggaatttcaggtagttctacaagacttataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 23940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 23908 - 23825
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  23908 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactagga 23825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 21960 - 21914
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21960 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 21914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 16932315 - 16932608
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  16932315 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgct 16932414  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| |||||||||||| |||||||||||| |||    
T  16932415 gctcaaacccttgcttcccactactccaagtagctccacaagtttacac--cctaacctcttcagccatcggaatgtcttccgtcttctcgaagatgctt 16932512  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||  || |||||||||||||||    
T  16932513 gtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatatgagatatctcccgctttccttgaagatctact 16932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 21 - 317
Target Start/End: Original strand, 22044884 - 22045178
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttg 119  Q
    ||||||||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  22044884 atcgtgccacgattcctgcagat-cttgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttg 22044982  T
Q  120 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcc 219  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||| |    
T  22044983 ttgctctttcccttgcttcccactactccaagtagctccacaagtttacaccc--taacctcttcagccatcggaatgtcttccgccttctcgaagatgc 22045080  T
Q  220 ttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  22045081 ttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 22045178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 317
Target Start/End: Original strand, 11006734 - 11007030
Alignment:
Q  21 atcgtgccacgattctgcagaaa-cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttg 119  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11006734 atcgtgccacgattctgcataaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcgatcatcaacctccttg 11006833  T
Q  120 ctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcc 219  Q
    ||||||   |||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||| |||||||||||||| |    
T  11006834 ctgctcaaacccttgcttcccactattccaagtagctccacaagtttacacct-tcaacctcttcagccatcggaatatcttctgccttctcgaagatgc 11006932  T
Q  220 ttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||    
T  11006933 ttgtagttcaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctcccgctttccttgaagatctact 11007030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 9174640 - 9174933
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgct 121  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |    
T  9174640 tcgtgccacgattctgcagaa-cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgtt 9174738  T
Q  122 gctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatcctt 221  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||| |||    
T  9174739 gctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttctgccttctcgaagatgctt 9174837  T
Q  222 gtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||   || |||||||||||||||    
T  9174838 ggagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagatatctccagctttccttgaagatctact 9174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 21 - 317
Target Start/End: Original strand, 22780906 - 22781199
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgc 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    ||||||||||||||    
T  22780906 atcgtaccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaattagtgatgatgcc---gatcaacctccttgc 22781002  T
Q  121 tgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtctt-ccgccttctcgaagatcc 219  Q
    |||||   ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||||||| |    
T  22781003 tgctcaaacccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcggaatgtcttcccgccttctcgaagatgc 22781101  T
Q  220 ttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  22781102 ttgtagtccaactacgctaggaatttcaggtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 22781199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 68 - 297
Target Start/End: Original strand, 22132987 - 22133215
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttt 166  Q
    |||||||||||||||| |||||  ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22132987 attctccaccttgactccaaatttgtgatgatgtcaaaccatcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagttt 22133086  T
Q  167 acacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactat 266  Q
    |||||   |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  22133087 acaccc--taacctcttcagccatcaaaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaagactat 22133184  T
Q  267 accataacctcttcaatacgagacatctccc 297  Q
    |||||||||||||||||||||||||||||||    
T  22133185 accataacctcttcaatacgagacatctccc 22133215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 3825064 - 3825331
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacct 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |    ||||||||     
T  3825064 ccatcgtgtcacgattctgcagaaacctgattttaagttaactctcacaattgtcaaccttgacttcaaatcagtgatgatgccactttaacatcaacca 3825163  T
Q  115 cc-ttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcga 213  Q
    || |||||||||||||||||||||||  |||| ||||||| ||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||    
T  3825164 ccattgctgctctttcccttgcttcctgctacaccaagtaactccacaagtttacaccccttaaacccttcagccctcagaatgtcttccgccttctcga 3825263  T
Q  214 agatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    || |||||| ||||||||||  ||| |||||| || |||||| |||||  |  ||| |||||||||||    
T  3825264 aggtccttgcagtccaactatactatgaattttaggtagttccacaagcattcaccttaacctcttca 3825331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 36920078 - 36920279
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  36920078 ccatcgtgccacgattttgcagaa-cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaattatcaaccacctt 36920176  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc 218  Q
    |||||||||||||||||||| |||||  | ||||||||||||||||||||||  | ||||||||||| ||||| ||||| |||||||| | | |||||||    
T  36920177 gctgctctttcccttgcttctcactatactaagtagctccacaagtttacac--cctaacctcttcaaccatcggaatgccttccgcccttttgaagatc 36920274  T
Q  219 cttgt 223  Q
    |||||    
T  36920275 cttgt 36920279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 22801354 - 22801517
Alignment:
Q  58 aactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctc 157  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22801354 aactctcacaattctctaccttgacttcaaatcagtgaagatgccaatcatcaacctccttgctgctctttcccttgcttcccactacaccaagtagctc 22801453  T
Q  158 cacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||||||||||  | || |||||||| ||||| ||||| |||||||| | | ||||||||||||    
T  22801454 cacaagtttacac--cctatcctcttcaaccatcggaatgccttccgcccttttgaagatccttgt 22801517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 12401349 - 12401559
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    |||||||||||| |  |||| |||||||||||||| | ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12401349 tctccaccttgaatctaaattagtgatgatgtcaaaccatcaatcaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 12401448  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    |||   ||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||||| || |||||| |||||  |  ||    
T  12401449 accc--taaccccgtcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactaaactaggaattttaggtagttccacaagcattcac 12401546  T
Q  269 cataacctcttca 281  Q
    | |||||||||||    
T  12401547 cttaacctcttca 12401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 70 - 281
Target Start/End: Original strand, 12396407 - 12396617
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    |||||||||||| |  |||| |||||||||||||| | ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12396407 tctccaccttgaatctaaattagtgatgatgtcaaaccatcaatcaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 12396506  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactatac 268  Q
    |||   ||||| | ||||||||| ||||||||||||||||||||||| |||||| ||||||||||  |||||||||| || |||||| |||||  |  ||    
T  12396507 accc--taaccccgtcagccatctgaatgtcttccgccttctcgaaggtccttgcagtccaactaaactaggaattttaggtagttccacaagcattcac 12396604  T
Q  269 cataacctcttca 281  Q
    | |||||||||||    
T  12396605 cttaacctcttca 12396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 24880283 - 24880099
Alignment:
Q  42 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctcc-ttgctgctctttcccttgct 136  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    |||||||| || ||||||||| |||| |||||    
T  24880283 aacctgattttaagttaactttcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctccttcctttgct 24880184  T
Q  137 tcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    | ||||| | ||||||||||||||||||||||||  | ||||||||||| ||||| ||||| |||||||| | |  |||||||||||    
T  24880183 ttccactgcaccaagtagctccacaagtttacac--cctaacctcttcaaccatcggaatgccttccgcccttttcaagatccttgt 24880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 70 - 260
Target Start/End: Complemental strand, 16455047 - 16454857
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    |||||||||||||| ||||| |||||||||| ||||    |||||||  ||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  16455047 tctccaccttgactccaaattagtgatgatgccaatttaacatcaaca-ccttgctgctctttcccttgctttctactacaccaagtagctccacaagtt 16454949  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaa 260  Q
    | |||  ||||||| |||||| |||| |||||||||| |||||||||||| |||||| ||||||||||| ||| |||||| || |||||| ||||    
T  16454948 ttcac--cttaacc-cttcagtcatcggaatgtcttctgccttctcgaaggtccttgcagtccaactacactaagaattttaggtagttccacaa 16454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 317
Target Start/End: Complemental strand, 36379979 - 36379816
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagat 250  Q
    ||||||||||||||  ||||||  ||||||||| ||| ||| |||||||||| |||||||||||||||||||||  | |||||| ||||||||||||  |    
T  36379979 gtagctccacaagtacacacct--taacctctttagctatcggaatgtcttctgccttctcgaagatccttgtatccaaactacactaggaatttcaagt 36379882  T
Q  251 agttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    | |||||||||||||||||||||||||||||||||   |||||||||  || |||||||||||||||    
T  36379881 aattctacaagactataccataacctcttcaatacagaacatctcccgctt-ccttgaagatctact 36379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 5100538 - 5100406
Alignment:
Q  176 aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacc 275  Q
    |||||||||||||||| |||||||||||||||| ||||  || |||||||||||||||||||||||||||||| |||||||||||||||||       ||    
T  5100538 aacctcttcagccatcggaatgtcttccgccttttcgat-atgcttgtagtccaactacgctaggaatttcaggtagttctacaagactat-------cc 5100447  T
Q  276 tcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||||||||||||||||  || |||||||||||||||    
T  5100446 tcttcaatacgagacatctcccgctt-ccttgaagatctact 5100406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 5100743 - 5100586
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| || ||||||| ||||    |||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||    
T  5100743 attctccaccttgactctaaattagcgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagcttcacaag 5100644  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||||  | ||||||||||| ||||| ||||| |||||||| | | ||||||| ||||    
T  5100643 tttacac--cctaacctcttcaaccatcggaatgccttccgcccttttgaagatctttgt 5100586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 14788021 - 14788178
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| || ||||||||||||    |||||||| ||  ||||||||||||||||||||||||||| |||||||| | ||||||    
T  14788021 attctccaccttgactctaaattagcgatgatgtcaatttaacatcaaccaccaagctgctctttcccttgcttcccactacaccaagtagtttcacaag 14788120  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||||  | ||||||||||| ||||| |||||||||||||| | | | ||||||||||    
T  14788121 tttacac--cctaacctcttcaaccatcggaatgtcttccgcccttttgtagatccttgt 14788178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 47564496 - 47564344
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    ||||||||||||||  || | | |||||||| ||| | ||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  47564496 tctccaccttgactctaagttattgatgatgccaagccatcaaccaccttgctgctctttcccttgctttccactacaccaagtagctccacgagtttac 47564397  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    ||  | ||||||||||| ||||| ||||||||||| || | | ||||||||||||    
T  47564396 ac--cataacctcttcaaccatcggaatgtcttcctcccttttgaagatccttgt 47564344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 36380159 - 36380023
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtt 165  Q
    ||||||||||||||  |||| |||||||||||||||    |||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  36380159 tctccaccttgactctaaattagtgatgatgtcaatttaacatcaaccaccatgctgctctttcccttgcttcccactagaccaagtagctccacaagtt 36380060  T
Q  166 tacacctcttaacctcttcagccatcagaatgtcttccg 204  Q
    ||||   | ||||||||||| ||||| ||||| ||||||    
T  36380059 taca--acctaacctcttcaaccatcggaatgccttccg 36380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 4884579 - 4884495
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtca 103  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4884579 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatgatgtca 4884495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 36920332 - 36920447
Alignment:
Q  181 cttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttc 280  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||| |||||  |  ||||||| ||||||    
T  36920332 cttcaaccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaagcattcaccataatctcttc 36920431  T
Q  281 aatacgagacatctcc 296  Q
    || ||  |||||||||    
T  36920432 aacacaggacatctcc 36920447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 15316678 - 15316592
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  15316678 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattcttcaccttgacttcaaatcagtgatgatgccaat 15316592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 47564298 - 47564189
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||| || |||||  |||||  |  ||||||    
T  47564298 cttaaccccttcagccatcagaatattttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagtttcacaagcattcaccata 47564199  T
Q  273 acctcttcaa 282  Q
    ||||||||||    
T  47564198 acctcttcaa 47564189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 16932640 - 16932782
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| |||||||| ||||| ||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  16932640 tccacaagtatacacctcataaccacttcagccatcggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 16932739  T
Q  255 ctacaagactataccataacctcttcaatacgagacatctccc 297  Q
    | |||||  |  |||||||| ||||||| ||  ||||||||||    
T  16932740 ccacaagcattcaccataacatcttcaacacaggacatctccc 16932782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 4569746 - 4569685
Alignment:
Q  44 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  4569746 cctgattttaagttaactctcacaattctccaccttgacttcaaattagtgatgatgccaat 4569685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 16638574 - 16638517
Alignment:
Q  42 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgat 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  16638574 aacctgattttatgttaactctcacaattctccaccttgacttcaaatgagtgatgat 16638517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 7941181 - 7941133
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7941181 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 11007062 - 11007187
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| ||||||||  |||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  11007062 tccacaagtatacacctc--aaccacttcagccatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 11007159  T
Q  255 ctacaagactataccataacctcttcaa 282  Q
    | |||||  |  |||||||| |||||||    
T  11007160 ccacaagctttcaccataacatcttcaa 11007187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 14788224 - 14788348
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||| | || ||||||||||||||||||||||| |||||| |||||| |||| |||||||||| || |||||| |||||  |  ||||||    
T  14788224 cttaaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaagcattcaccata 14788323  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  14788324 acatcttcaacacaggacatctccc 14788348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 18535387 - 18535512
Alignment:
Q  115 ccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaa 214  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||||||||||   | ||||||||||||||  ||||| |||||||| ||| |||    
T  18535387 ccttgctgctcttttccttgcttcccactacatcatgtagctccacaagtttacacc---ttacctcttcagccattggaatgccttccgcc-tcttgaa 18535482  T
Q  215 gatccttgtagtccaactacgctaggaattt 245  Q
    ||| |||| | ||||||||| |||| |||||    
T  18535483 gattcttgca-tccaactacactagaaattt 18535512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Complemental strand, 24880053 - 24879965
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaag 261  Q
    ||||| |||||| ||| |||||||||||||| ||||||||||| |||||| ||||||||||| |||||||||| || |||||| |||||    
T  24880053 cttaatctcttctgccttcagaatgtcttccaccttctcgaaggtccttgcagtccaactactctaggaattttaggtagttccacaag 24879965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 9174965 - 9175089
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| |||||||| || |||| |||||||||||||||||| |||||| ||||||||||| |||||||||| || |||| |    
T  9174965 tccacaagtatacacct--taaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagtcc 9175062  T
Q  256 tacaagactataccataacctcttcaa 282  Q
     |||||  |  |||||||| |||||||    
T  9175063 cacaagcattcaccataacatcttcaa 9175089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 22045210 - 22045293
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctagga 241  Q
    ||||||||| ||||||||  |||| |||||||| || ||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  22045210 tccacaagtatacacctc--aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagga 22045293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 36379783 - 36379644
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||| |||||||  ||||| ||| ||||||| |||||  ||||| |||||||||| |||||| |||||||||||||| | ||||| || ||||||    
T  36379783 tccacaagtatacacct--taacccctttagccatcggaatgatttccgtcttctcgaaggtccttgcagtccaactacgctggcaattttaggtagttc 36379686  T
Q  256 tacaagactataccataacctcttcaatacgagacatctccc 297  Q
     |||||  |  |||||||| ||||||| || |||||||||||    
T  36379685 cacaagcattcaccataacatcttcaacacaagacatctccc 36379644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 9176990 - 9177035
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9176990 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 16454848 - 16454723
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||| || |||||||||||| |||| |||||| ||||||||||| |||||| ||| || |||||| |||||  |  |||||    
T  16454848 cttaacctcttcagccatcggaacgttttccgccttctcaaagagtccttgcagtccaactacactaggagttttaggtagttccacaagcattcaccat 16454749  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
    ||| ||||||| ||  ||||||||||    
T  16454748 aacatcttcaacacaggacatctccc 16454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 16934669 - 16934714
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16934669 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 22801563 - 22801672
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||| ||| || ||||||||||||||||||||||  |||||| ||||||||||| |||||||||| || |||||| |||||  |  ||||||    
T  22801563 cttaaccccttctgccctcggaatgtcttccgccttctcgaatgtccttgcagtccaactacactaggaattttaggtagttccacaagcattcaccata 22801662  T
Q  273 acctcttcaa 282  Q
    || |||||||    
T  22801663 acatcttcaa 22801672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 11434817 - 11434769
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11434817 ccatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 18535536 - 18535592
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtcca 229  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  18535536 cttaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtcca 18535592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 22781231 - 22781356
Alignment:
Q  156 tccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    ||||||||| ||||||||  || | ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| || ||||     
T  22781231 tccacaagtatacacctc--aatcccttcagccatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagtc 22781328  T
Q  255 ctacaagactataccataacctcttcaa 282  Q
    | |||||  |  |||||||| |||||||    
T  22781329 ccacaagcattcaccataacatcttcaa 22781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 3825319 - 3825405
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctac 258  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||| ||||||  || | ||||||||||    
T  3825319 cttaacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagatttatatagttctac 3825405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 5637960 - 5638006
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  5637960 atcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 22783271 - 22783317
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  22783271 atcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22783317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 18535627 - 18535700
Alignment:
Q  172 tcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 245  Q
    |||||||||||||||||||| | | ||||||||| |||| ||||| ||||| ||||||||||| ||||||||||    
T  18535627 tcttaacctcttcagccatcgggacgtcttccgcgttctagaagagccttgcagtccaactacactaggaattt 18535700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 22048529 - 22048598
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatc 90  Q
    ||||||||||||||||   | | | |||||||||||||||||||||||||||||| ||||||||||||||    
T  22048529 atcgtgccacgattcttgcggatcttgattttaagttaactctcacaattctccaacttgacttcaaatc 22048598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 3577451 - 3577556
Alignment:
Q  179 ctcttcagccatcagaatgtcttccgccttctcgaaga---tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacc 275  Q
    ||||||| ||||| |||||||||||||||||| |||||   |||||| | ||||||||| |||||||||| || |||||| | ||| ||| |||||||||    
T  3577451 ctcttcaaccatcggaatgtcttccgccttcttgaagacaatccttgca-tccaactacactaggaattttaggtagttccataagtctacaccataacc 3577549  T
Q  276 tcttcaa 282  Q
    |||||||    
T  3577550 tcttcaa 3577556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 37089866 - 37089910
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactct 63  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  37089866 ccatcgtgccacgattctgcagaaatctgattttaagttaactct 37089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 38409039 - 38408992
Alignment:
Q  21 atcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  38409039 atcgtgccacgattctgcagaaatctaattttaagttaactctcacaa 38408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 51015088 - 51015037
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaatt 70  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  51015088 ccatcatgccacgattctgcagaaatctgattttaagttaactctcagaatt 51015037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 3577620 - 3577748
Alignment:
Q  151 gtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatc---cttgtagtccaactacgctaggaatttca 247  Q
    |||| ||||||||| ||||||   ||||||||||| ||||| ||||| |||||| ||||| |||||||   |||| | ||||||||| |||||||||| |    
T  3577620 gtagttccacaagtctacacca--taacctcttcaaccatcggaatgccttccgacttcttgaagatcatccttgca-tccaactacactaggaatttta 3577716  T
Q  248 gatagttctacaagactataccataacctctt 279  Q
    | |||||| ||||| ||| |||||||||||||    
T  3577717 ggtagttccacaagtctacaccataacctctt 3577748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 8528966 - 8528918
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  8528966 ccatcgtgacacgattctccagaaatctgattttaagttaactctcaca 8528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 24888638 - 24888594
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactct 63  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  24888638 ccatcgtgccacaattctgcagaaatctgattttaagttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 18846971 - 18846922
Alignment:
Q  21 atcgtgccacgattctgcagaaac--ctgattttaagttaactctcacaa 68  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||    
T  18846971 atcgtgccacgattctgcagaaaaatctgattttaagttaactctcacaa 18846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 12396605 - 12396674
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||||||||||| ||| ||||| || |||||| |||| |||||| ||||||||||| ||||||    
T  12396605 cttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactagga 12396674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 12401547 - 12401616
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctagga 241  Q
    ||||||||||||||||||| ||| ||||| || |||||| |||| |||||| ||||||||||| ||||||    
T  12401547 cttaacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactagga 12401616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 36921986 - 36922033
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  36921986 ccatcgtaccacgattttgcagaa-cctgattttaagttaactctcaca 36922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 6764701 - 6764654
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  6764701 catcgtggcacgattctccagaattctgattttaagttaactctcaca 6764654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 10114328 - 10114273
Alignment:
Q  227 ccaactacgctaggaatttcagatagttctacaagactataccataacctcttcaa 282  Q
    |||||||| |||||||||| || |||||| |||||  |||||||||||||||||||    
T  10114328 ccaactacactaggaattttaggtagttccacaagtatataccataacctcttcaa 10114273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 47868242 - 47868195
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  47868242 catcgtggcacgattctccagaattctgattttaagttaactctcaca 47868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15312042 - 15311992
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||    
T  15312042 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaat 15311992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 48486161 - 48486112
Alignment:
Q  19 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  48486161 ccatcgtgccacgatttctgcagga-cctgattttaagttaactctcacaa 48486112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 18586664 - 18586615
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| ||||   ||||||||||||||||||||||||    
T  18586664 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaa 18586615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 31300122 - 31300073
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    |||||||| ||||||||| ||||   ||||||||||||||||||||||||    
T  31300122 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaa 31300073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 47747370 - 47747333
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    ||||||||||||||||||||||||||||| || |||||    
T  47747370 attctccaccttgacttcaaatcagtgataatatcaat 47747333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 8631914 - 8631958
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactct 63  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||    
T  8631914 ccatcgtggcacgattctccagaattctgattttaagttaactct 8631958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 16489049 - 16489001
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  16489049 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 16489001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 26086244 - 26086292
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| |||||||||  ||||  |||||||||||||||||||||||    
T  26086244 ccatcgtggcacgattctctagaattctgattttaagttaactctcaca 26086292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 40636916 - 40636868
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| || ||  |||||||||||||||||||||||    
T  40636916 ccatcgtggcacgattctccaaaattctgattttaagttaactctcaca 40636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 46 - 317
Target Start/End: Complemental strand, 2650 - 2391
Alignment:
Q  46 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactac 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2650 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgattccaatcatcaacctccttgctgctctttcccttgcttcccactac 2551  T
Q  146 tccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaattt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||             |||||||| ||||| |||||||||||||||||||||||||||    
T  2550 tccaagtagctccacaagtttacacctcttaacctcttcagccat------------agccttctcaaagatgcttgtagtccaactacgctaggaattt 2463  T
Q  246 cagatagttctacaagactataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  2462 caagtagttctacaagactataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 2391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 168; Significance: 5e-90; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 69785 - 70048
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctcctt 118  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  69785 ccatcgtgccacgattctgcagaaatctgattttaagttaactcttacaattctccactttgacttcaaatcagtgatgatgtcaatcatcaaccacctt 69884  T
Q  119 gctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaa-gat 217  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||| | |    
T  69885 gctgatctttcccttgcttcccactacaccaagtagctccacaagtttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaaaggt 69984  T
Q  218 ccttgtagtccaactacgctaggaatttcagatagttctacaagactataccataacctcttca 281  Q
    ||||| ||||||||||| |||||||||| || ||| || |||||  |  ||| |||||||||||    
T  69985 ccttgcagtccaactacactaggaattttaggtagctccacaagcattcaccttaacctcttca 70048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 70036 - 70161
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaatttcagatagttctacaagactataccat 271  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||| | |||| |||||||||||||||||||||| || |||| | |||||  |  |||||    
T  70036 cttaacctcttcagccatcggagcgtcttccgtcttctcgaagagtacttgcagtccaactacgctaggaattttaggtagtcccacaagcattcaccat 70135  T
Q  272 aacctcttcaatacgagacatctccc 297  Q
    ||| |||||||| |  ||||||||||    
T  70136 aacatcttcaatgcaggacatctccc 70161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 73496 - 73546
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaat 69  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  73496 ccatcgtgccacgattctgcataaatctgattttaagttaactcttacaat 73546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 95 - 308
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaatcatcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagttta 167  Q
    ||||||||||||||||  |||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  95 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttaatgctctttcccttgcttcccactacaccaagtagcttcacaagttta 194  T
Q  168 cacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactata 267  Q
    |||| | ||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||| |||||| ||| || |||| | |||||  |  |    
T  195 caccccataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggagttttaggtagtcccacaagcattca 294  T
Q  268 ccataacctcttca 281  Q
    || |||||||||||    
T  295 ccttaacctcttca 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 296 - 369
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaaga-tccttgtagtccaactacgctaggaattt 245  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  296 cttaacctcttcagccatcggaacgtcttccgacttctcgaagagtccttgcagtccaactacgctaggaattt 369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 35579 - 35429
Alignment:
Q  70 tctccaccttgacttcaaatcagtgatgatgtcaatc-atcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttac 168  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  35579 tctccaccttgactccaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttcccttg-ttcctactacaccaagtagctccacaagtttac 35481  T
Q  169 acctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||   ||||||||||| |||||  |||| |||||||| | | ||||||||||||    
T  35480 acc---taacctcttcaaccatcgaaatgccttccgcccttttgaagatccttgt 35429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 35383 - 35253
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||| |||| || |||||| |||||  |  ||||||    
T  35383 cttaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtctaactacgctaggtattttaggtagttccacaagcattcaccata 35284  T
Q  273 acctcttcaatacgagacatctcccatttcc 303  Q
    |||||||||| ||  |||||||||| |||||    
T  35283 acctcttcaacacaggacatctcccgtttcc 35253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 51709 - 51552
Alignment:
Q  68 attctccaccttgacttcaaatcagtgatgatgtcaat----catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaag 163  Q
    ||||||||||||||||  |||| || ||||||||||||    |||||||| ||  ||||||||||||||||||||||||||| |||||||| | ||||||    
T  51709 attctccaccttgactctaaattagcgatgatgtcaatttaacatcaaccaccaagctgctctttcccttgcttcccactacaccaagtagtttcacaag 51610  T
Q  164 tttacacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt 223  Q
    |||||||  | ||||||||||| ||||| |||||||||||||| | | | ||||||||||    
T  51609 tttacac--cctaacctcttcaaccatcggaatgtcttccgcccttttgtagatccttgt 51552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 51506 - 51382
Alignment:
Q  173 cttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttctacaagactataccata 272  Q
    ||||||| |||||| | || ||||||||||||||||||||||| |||||| |||||| |||| |||||||||| || |||||| |||||  |  ||||||    
T  51506 cttaaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaagcattcaccata 51407  T
Q  273 acctcttcaatacgagacatctccc 297  Q
    || ||||||| ||  ||||||||||    
T  51406 acatcttcaacacaggacatctccc 51382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 1156 - 1070
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcaat 105  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1156 ccatcgtggcacgattctccagatttctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaat 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 317
Target Start/End: Complemental strand, 189278 - 189200
Alignment:
Q  240 gaatttcagatagttctacaagact-ataccataacctcttcaatacgagacatctcccatttcccttgaagatctact 317  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  189278 gaatttcaggtagttctacaagacttataccataacctcttcaatacgagacatctcccgctttccttgaagatctact 189200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28989 - 28940
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28989 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 28940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 13007 - 13054
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13007 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 4271 - 4195
Alignment:
Q  179 ctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagttc 255  Q
    ||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| || ||||||    
T  4271 ctcttcagccaacggaatgtcttccgccttctcgaagagccttgcagtccaactacactagaaattttaggtagttc 4195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 4365 - 4292
Alignment:
Q  181 cttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatttcagatagtt 254  Q
    |||||||||||| ||||| ||||| |||||||||| |||||| ||||||||||| |||||||||| || |||||    
T  4365 cttcagccatcataatgttttccgacttctcgaaggtccttgcagtccaactacactaggaatttgaggtagtt 4292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 4512 - 4387
Alignment:
Q  106 catcaacctccttgctgctctttcccttgcttcccactactccaagtagctccacaagtttacacctcttaacctcttcagccatcagaatgtcttccgc 205  Q
    |||||||| || || | ||||||||||||||||||| ||| ||| |||||||||||| ||||||||   |||| |||| | ||||| ||||| |||||||    
T  4512 catcaaccaccatgtttctctttcccttgcttcccagtacaccatgtagctccacaa-tttacacc---taacttcttaaaccatcggaatgccttccgc 4417  T
Q  206 cttctcgaagatccttgtagtccaactacgc 236  Q
    ||| | |||||| |||||| |||||||||||    
T  4416 ctttttgaagattcttgta-tccaactacgc 4387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 5972 - 5927
Alignment:
Q  22 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  5972 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 14814 - 14768
Alignment:
Q  21 atcgtgccacgattc-tgcagaaacctgattttaagttaactctcac 66  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14814 atcgtgccacgattcctgcagaatcctgattttaagttaactctcac 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 41974 - 42022
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  41974 ccatcgtggcacgattcttcagaattctgattttaagttaactctcaca 42022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 1302 - 1349
Alignment:
Q  20 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  1302 catcgtggcacgattctccagaattctgattttaagttaactctcaca 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 16024 - 15976
Alignment:
Q  19 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 67  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  16024 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 15976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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