View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11784_low_13 (Length: 454)
Name: NF11784_low_13
Description: NF11784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11784_low_13 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 368; Significance: 0; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 1 - 439
Target Start/End: Complemental strand, 28607343 - 28606907
Alignment:
| Q |
1 |
cttgcaattcatttcaagtttcacactttgcatcccatgacttttggtgtaagagtgtgtgacccaaatccaactcttactgctcatttcccctataaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28607343 |
cttgcaattcatttcaagtttcacactctgaatgtcatgacttttggtgtaagagtgtgtgaaccaaatccaactcttacggctcatttcccctataaat |
28607244 |
T |
|
| Q |
101 |
agaggcaatgcaattgaaggaatgcattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28607243 |
agaggcaatggaattgaaggaaagcatcgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaa |
28607144 |
T |
|
| Q |
201 |
atccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacggga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607143 |
atccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggga |
28607044 |
T |
|
| Q |
301 |
aacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607043 |
aacactatattgtatctcttgtgtgtgtgag--agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtt |
28606946 |
T |
|
| Q |
401 |
tttccctcagtattagagggttttccacgttaaatattg |
439 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
28606945 |
tttccctcggtattagagggtttttcacgttaaatattg |
28606907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 1 - 439
Target Start/End: Complemental strand, 28612105 - 28611669
Alignment:
| Q |
1 |
cttgcaattcatttcaagtttcacactttgcatcccatgacttttggtgtaagagtgtgtgacccaaatccaactcttactgctcatttcccctataaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28612105 |
cttgcaattcatttcaagtttcacactctgaatgtcatgacttttggtgtaagagtgtgtgaaccaaatccaactcttacggctcatttcccctataaat |
28612006 |
T |
|
| Q |
101 |
agaggcaatgcaattgaaggaatgcattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28612005 |
agaggcaatggaattgaaggaaagcatcgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaa |
28611906 |
T |
|
| Q |
201 |
atccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacggga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611905 |
atccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggga |
28611806 |
T |
|
| Q |
301 |
aacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611805 |
aacactatattgtatctcttgtgtgtgtgag--agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtt |
28611708 |
T |
|
| Q |
401 |
tttccctcagtattagagggttttccacgttaaatattg |
439 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
28611707 |
tttccctcggtattagagggtttttcacgttaaatattg |
28611669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 128 - 439
Target Start/End: Original strand, 14178646 - 14178955
Alignment:
| Q |
128 |
tgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
227 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178646 |
tgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
14178745 |
T |
|
| Q |
228 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtg |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178746 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtg |
14178845 |
T |
|
| Q |
328 |
tgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttcca |
427 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
14178846 |
t--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttcca |
14178943 |
T |
|
| Q |
428 |
cgttaaatattg |
439 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14178944 |
cgttaaatattg |
14178955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 128 - 439
Target Start/End: Original strand, 14173892 - 14174201
Alignment:
| Q |
128 |
tgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
227 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173892 |
tgaagcagaagtgaaaatacaaagtttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
14173991 |
T |
|
| Q |
228 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtg |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14173992 |
gggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtg |
14174091 |
T |
|
| Q |
328 |
tgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttcca |
427 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
14174092 |
t--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttcca |
14174189 |
T |
|
| Q |
428 |
cgttaaatattg |
439 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14174190 |
cgttaaatattg |
14174201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 124 - 439
Target Start/End: Original strand, 44161538 - 44161848
Alignment:
| Q |
124 |
gcattgaagcagaagtgagaat-acaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaat |
222 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161538 |
gcatcgaagcagaagtgaaaaacacaaagcttctgtgtgt--agaggtgtgtgagaggaataatagagtgttgagtaaatccagagagtgtgggaaaaat |
44161635 |
T |
|
| Q |
223 |
acaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgt |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44161636 |
acaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtcttacgggaaacactatattgtatctcttgt |
44161735 |
T |
|
| Q |
323 |
gtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggtt |
422 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
44161736 |
gtgtgt--aagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggtt |
44161831 |
T |
|
| Q |
423 |
ttccacgttaaatattg |
439 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
44161832 |
ttccacgttaaatattg |
44161848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 125 - 439
Target Start/End: Original strand, 11104424 - 11104731
Alignment:
| Q |
125 |
cattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatac |
224 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
11104424 |
cattgaagcagaagtca-aatacaaagcttctatgtg--tagaagtgtgtgagagaaaaaatagagtgttgagtaaatccagagagtgtaggaaaaatac |
11104520 |
T |
|
| Q |
225 |
accgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgt |
324 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
11104521 |
accgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgggtctcacgggaaacactatattgtatctctt---t |
11104617 |
T |
|
| Q |
325 |
gtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggtttt |
424 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| || ||||| ||||||||| |||| |
|
|
| T |
11104618 |
gtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagtttgtcccgtggt-ttaccctcgatattagaggatttt |
11104716 |
T |
|
| Q |
425 |
ccacgttaaatattg |
439 |
Q |
| |
|
| | ||||||||||| |
|
|
| T |
11104717 |
ctatgttaaatattg |
11104731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 235 - 439
Target Start/End: Complemental strand, 48827000 - 48826799
Alignment:
| Q |
235 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagaga |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgt--aaga |
48826903 |
T |
|
| Q |
335 |
gagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaa |
434 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||| |||||||||||||| |
|
|
| T |
48826902 |
gagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgttaaa |
48826804 |
T |
|
| Q |
435 |
tattg |
439 |
Q |
| |
|
||||| |
|
|
| T |
48826803 |
tattg |
48826799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 48708256 - 48708157
Alignment:
| Q |
340 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattg |
439 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| |||||| |||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 425
Target Start/End: Complemental strand, 24726442 - 24726288
Alignment:
| Q |
266 |
ataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaat |
365 |
Q |
| |
|
|||||| |||| |||||| ||| |||||||||| ||||| |||| |||||||| ||| || ||||| ||||||||||||| | || ||||||||| |
|
|
| T |
24726442 |
ataataacatttgaataggagt-ggtctcacggaaaacaatatagtgtatctcgtgtcggta----agagaatggagagaatattattatgttctttaat |
24726348 |
T |
|
| Q |
366 |
atagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
425 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||| ||||||| ||||||| ||||||| |
|
|
| T |
24726347 |
ataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 38 - 439
Target Start/End: Complemental strand, 37040927 - 37040527
Alignment:
| Q |
38 |
tgacttttggtgtaagagtgtgtgacccaaatccaactcttactgct-catttcccctataaatagaggcaatgcaattgaaggaatgcattgaagcaga |
136 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||| ||| |||||| | ||||||||||| ||||| | |||||||| ||||||||||||| |
|
|
| T |
37040927 |
tgacttttagtgtaagagtgtgtgaaccaaatccaactcttacggcttcatttctcttataaatagagacaatgatagtgaaggaaagcattgaagcaga |
37040828 |
T |
|
| Q |
137 |
agtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggta |
236 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37040827 |
agtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacatcgggtgggta |
37040728 |
T |
|
| Q |
237 |
tcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagagaga |
336 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040727 |
tcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggaaaacactatattgtatctcttgtgtgtgtgag--aga |
37040630 |
T |
|
| Q |
337 |
gtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaata |
436 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
37040629 |
gtggagaaaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaata |
37040530 |
T |
|
| Q |
437 |
ttg |
439 |
Q |
| |
|
||| |
|
|
| T |
37040529 |
ttg |
37040527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 131 - 439
Target Start/End: Original strand, 15290195 - 15290492
Alignment:
| Q |
131 |
agcagaagtgagaatacaaa---gcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacacc |
227 |
Q |
| |
|
||||||||||| |||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||| |
|
|
| T |
15290195 |
agcagaagtgaaaatacaaaaaagcttctgtgtgt--agaagtgtgtgagaa------tagagtgttgactaaatccagaaagtgtgg-aaaaatacacc |
15290285 |
T |
|
| Q |
228 |
gggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtg |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
15290286 |
gggtgggtatcatctctataacttctaggtgctgaaata--atagcattcgaataggagtgggtctcacgg-aaacactatattgtatctcttgtgtgtg |
15290382 |
T |
|
| Q |
328 |
tgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttcca |
427 |
Q |
| |
|
| |||| |||||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||||||| | | |||| |||||||||||||||||| |
|
|
| T |
15290383 |
taagag--agtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagtttgtcccgtggtttatacctcggtattagagggttttcca |
15290480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 126 - 439
Target Start/End: Original strand, 12098958 - 12099263
Alignment:
| Q |
126 |
attgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
225 |
Q |
| |
|
||||||| |||||||| | ||||||| || ||||||| |||||| ||||| | ||||||||||||||||||||||| ||||| | | | |||||| | |
|
|
| T |
12098958 |
attgaagtagaagtgaaactacaaagtttttgtgtgt--agaagtatgtgaaaggaaaaatagagtgttgagtaaattcagag--tctcg--aaaataga |
12099051 |
T |
|
| Q |
226 |
ccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
325 |
Q |
| |
|
| ||| |||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||||||| | |
|
|
| T |
12099052 |
ttgagtgagtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcg |
12099151 |
T |
|
| Q |
326 |
tgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
425 |
Q |
| |
|
||| |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||| || ||||||||||||| |
|
|
| T |
12099152 |
tgtaagag--agtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggttttt |
12099249 |
T |
|
| Q |
426 |
cacgttaaatattg |
439 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
12099250 |
cacgtaaaatattg |
12099263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 160 - 389
Target Start/End: Original strand, 12082002 - 12082227
Alignment:
| Q |
160 |
tgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgc |
259 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| ||||||||||| | | |||||||||| | ||||| ||||| |||||||||||||||||| || |
|
|
| T |
12082002 |
tgtgtagaagtgtgtgatcagaaaattagagtgttgggtaaatccagaaaaag-gggaaaaatatatcgggtaggtattatctctataacttctaggcgc |
12082100 |
T |
|
| Q |
260 |
tataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattc |
359 |
Q |
| |
|
||||| |||||| |||| |||||| || |||||| |||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| |
|
|
| T |
12082101 |
tataaaataataacatttgaataggagcgagtctcattagaaacactatattgtatctcttttccgtgt--aagagagtggagaaaatattgtaatattc |
12082198 |
T |
|
| Q |
360 |
tttaatatagtggaatatttttcggagttt |
389 |
Q |
| |
|
||||||||||||||||||||| ||||||| |
|
|
| T |
12082199 |
-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 2757448 - 2757370
Alignment:
| Q |
300 |
aaacactatattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttt |
380 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||||||||||| || |||||| || |||||||||||||||||| |
|
|
| T |
2757448 |
aaacactatattgtatctcttgagtgtg--aaagagagtggagagaatagtgcaatatttttaaatatagtggaatatttt |
2757370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 15302895 - 15302960
Alignment:
| Q |
124 |
gcattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaataga |
189 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
15302895 |
gcatcgaagcagaattgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagagcaaaaataga |
15302960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 279; Significance: 1e-156; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 126 - 439
Target Start/End: Original strand, 12930629 - 12930940
Alignment:
| Q |
126 |
attgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
225 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930629 |
attgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
12930728 |
T |
|
| Q |
226 |
ccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930729 |
ccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
12930828 |
T |
|
| Q |
326 |
tgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
425 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
12930829 |
tgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
12930926 |
T |
|
| Q |
426 |
cacgttaaatattg |
439 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
12930927 |
cacgttaaatattg |
12930940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 126 - 439
Target Start/End: Original strand, 12935375 - 12935686
Alignment:
| Q |
126 |
attgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
225 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935375 |
attgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
12935474 |
T |
|
| Q |
226 |
ccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935475 |
ccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
12935574 |
T |
|
| Q |
326 |
tgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
425 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
12935575 |
tgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
12935672 |
T |
|
| Q |
426 |
cacgttaaatattg |
439 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
12935673 |
cacgttaaatattg |
12935686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 26505063 - 26504946
Alignment:
| Q |
324 |
tgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttt |
423 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | ||||| ||| ||| ||||||| ||| | |
|
|
| T |
26505063 |
tgtgtgaaagagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggt-tttgccttgttattagacggtat |
26504965 |
T |
|
| Q |
424 |
tccacgttaaatattgatgt |
443 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
26504964 |
t-cacgttaaatattgatgt |
26504946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 15588948 - 15589057
Alignment:
| Q |
334 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaa |
433 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || | |||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
434 |
atattgatgt |
443 |
Q |
| |
|
|||||||||| |
|
|
| T |
15589048 |
atattgatgt |
15589057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 17124006 - 17124058
Alignment:
| Q |
2 |
ttgcaattcatttcaagtttcacactttgcatcccatgacttttggtgtaaga |
54 |
Q |
| |
|
|||||||||||| |||||||||||||||| || |||||||||||||||||| |
|
|
| T |
17124006 |
ttgcaattcattccaagtttcacactttgaatgttatgacttttggtgtaaga |
17124058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 126 - 439
Target Start/End: Original strand, 34907092 - 34907403
Alignment:
| Q |
126 |
attgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
225 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907092 |
attgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatagagtgttgagtaaatccagagagtgtgggaaaaataca |
34907191 |
T |
|
| Q |
226 |
ccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907192 |
ccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaacactatattgtatctcttgtgtg |
34907291 |
T |
|
| Q |
326 |
tgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttc |
425 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
34907292 |
tgt--gagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
34907389 |
T |
|
| Q |
426 |
cacgttaaatattg |
439 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
34907390 |
cacgttaaatattg |
34907403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34906934 - 34907051
Alignment:
| Q |
1 |
cttgcaattcatttcaagtttcacactttgcatcccatgacttttggtgtaagagtgtgtgacccaaatccaactcttactgctcatttcccctataaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34906934 |
cttgcaattcatttcaagtttcacactctgaatgtcatgacttttggtgtaagagtgtgtgaaccaaatccaactcttacggctcatttcccctataaat |
34907033 |
T |
|
| Q |
101 |
agaggcaatgcaattgaa |
118 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
34907034 |
agaggcaatagaattgaa |
34907051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 8539013 - 8539453
Alignment:
| Q |
1 |
cttgcaattcatttcaagtttcacactttgcatcccatgacttttggtgtaagagtgtgtgacccaaatccaactcttactgctcatttcccctataaat |
100 |
Q |
| |
|
||||||||||||| ||||||||||||| || || |||||||||||||||||||| |||||| | | ||||||||||| ||| ||||||||||||||| |
|
|
| T |
8539013 |
cttgcaattcattccaagtttcacactctgaatgtcatgacttttggtgtaagag-gtgtgaactatttccaactcttatggcttatttcccctataaat |
8539111 |
T |
|
| Q |
101 |
agaggcaatgcaattgaaggaatgcattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaa |
200 |
Q |
| |
|
||||||| || ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||| |
|
|
| T |
8539112 |
agaggca-tggaattgaaggaaagcatcgaagcagaagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgagaggaaaaatatagtgttcagtaa |
8539210 |
T |
|
| Q |
201 |
atccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacggga |
300 |
Q |
| |
|
|| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| |||||||| ||| |
|
|
| T |
8539211 |
attcagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgggtctcac-gga |
8539309 |
T |
|
| Q |
301 |
aacact---atattgtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtg |
397 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8539310 |
aacactataatattgtatctcttgtgtgtgt--aagagagtggagataatattgtaatattcttaaatatagtggaatatctttcggagtttgtcccgtg |
8539407 |
T |
|
| Q |
398 |
gtctttccctcagtattagagggttttccacgttaaatattgatgt |
443 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8539408 |
atttttccctcggtattagagggttttccacgttaaatattgatgt |
8539453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 124 - 439
Target Start/End: Complemental strand, 42911404 - 42911091
Alignment:
| Q |
124 |
gcattgaagcagaagtgagaat-acaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaat |
222 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
42911404 |
gcatcgaagcagaagtgaaaaacacaaagcttctgtgtgtgtagaagtgtgtgagagaaaaaatagagtgttgagtaaatccagagagtgtggaaaaaat |
42911305 |
T |
|
| Q |
223 |
acaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgt |
322 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
42911304 |
acactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtaggtctcaagggaaacactatattgtatcttttgt |
42911205 |
T |
|
| Q |
323 |
gtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggtt |
422 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
42911204 |
gtgtgtgag--agagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagtttgtcccgtggtttttccctcggtattagagggtt |
42911108 |
T |
|
| Q |
423 |
ttccacgttaaatattg |
439 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
42911107 |
ttccatgttaaatattg |
42911091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 124 - 439
Target Start/End: Complemental strand, 29107287 - 29106976
Alignment:
| Q |
124 |
gcattgaagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaata |
223 |
Q |
| |
|
|||| |||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29107287 |
gcatcgaagcagaagtggaaatacaaagcttctctgtatgtagaagtgtgtgagagaaaaaatag--tgttgagtaaatccagagagtgtgggaaaaata |
29107190 |
T |
|
| Q |
224 |
caccgggtggg-tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctcttgt |
322 |
Q |
| |
|
|| ||||||| |||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29107189 |
cattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagtaggtctcacgggaaacactat-ttgtatctcttgt |
29107091 |
T |
|
| Q |
323 |
gtgtgtgagagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggtt |
422 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
29107090 |
gtgtgtaagagag--tggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggtt |
29106993 |
T |
|
| Q |
423 |
ttccacgttaaatattg |
439 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
29106992 |
ttccacgttaaatattg |
29106976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 439
Target Start/End: Complemental strand, 38997320 - 38997236
Alignment:
| Q |
355 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattg |
439 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| || |||| || ||||||||||||||| |||| |||||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattg |
38997236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 51302118 - 51302306
Alignment:
| Q |
130 |
aagcagaagtgagaatacaaagcttctgtgtgtgtagaagtgtgtgagaagaaaaatagagtgttgagtaaatccagagagtgtgggaaaaatacaccgg |
229 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302118 |
aagcataagtgaaaatacaaagcttctgtgtgtgtagaagtgtgtgtgaggaaaaatagagtattgagtaaatccagagagtgtggataaaatacaccgg |
51302217 |
T |
|
| Q |
230 |
gtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctc |
318 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
51302218 |
gtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtctcacgggaaacactatattgtatctc |
51302306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 439
Target Start/End: Original strand, 51302308 - 51302337
Alignment:
| Q |
410 |
gtattagagggttttccacgttaaatattg |
439 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattg |
51302337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 2100379 - 2100294
Alignment:
| Q |
355 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtctttccctcagtattagagggttttccacgttaaatattgatgt |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| || |||| |||| ||||| |||||||||||| |||||||||||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgt |
2100294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 2100771 - 2100723
Alignment:
| Q |
312 |
gtatctcttgtgtgtgtgagagagagtggagagaatattgtaatattcttt |
362 |
Q |
| |
|
||||||||||||| ||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
2100771 |
gtatctcttgtgtatgtaagagag--tggagagaatattgtaatattcttt |
2100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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