View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11787_high_43 (Length: 397)
Name: NF11787_high_43
Description: NF11787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11787_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 38762595 - 38762973
Alignment:
| Q |
1 |
atatggggccactgcacgtgtatggatgattgtcatatactatctagctagattagaaaattttcaaattaagattaagatgcaattcctctttgtcttg |
100 |
Q |
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| T |
38762595 |
atatggggccactgcacgtgtatggatgattgtcatatactatctagctagattagaaaattttcaaattaagattaagatgcaattcctctttgtcttg |
38762694 |
T |
|
| Q |
101 |
ttcaatattctaaacaaagagtataaataaataacttctacatcatgttgcttgttagtgttgttttcttaactatacgattacttcttgcttagcacta |
200 |
Q |
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| T |
38762695 |
ttcaatattctaaacaaagagtataaataaataacttctacatcatgttgcttgttagtgttgttttcttaactatacgattacttcttgcttagcacta |
38762794 |
T |
|
| Q |
201 |
tcaattaattatcattcttttgtattaatgttgactagatactcatacaatttttattctatacatgtgttgggtttatgtatgagctaaatgtatattt |
300 |
Q |
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| T |
38762795 |
tcaattaattatcattcttttgtattaatgttgactagatactcatacaatttttactttatagatgtattgggtttatgtatgagctaaatgtatattt |
38762894 |
T |
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| Q |
301 |
ataagagagctcctttatattctccgataaatgacatcagagttttgattcgatttagtggtagagtaagagtgagatct |
380 |
Q |
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| T |
38762895 |
ataagacagctcctttata-tcttcaacaaatgacatcagagttttgattcaatttaatggtagagtaagagtgagatct |
38762973 |
T |
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