View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11787_low_25 (Length: 513)
Name: NF11787_low_25
Description: NF11787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11787_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 1 - 497
Target Start/End: Original strand, 44007380 - 44007876
Alignment:
| Q |
1 |
cagagaagtatagactttgttaagctcgccggacgaggactttgaaatatcctaaatgaagattctacttccattgcatgacgagcaggcgtgatcagtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44007380 |
cagagaagtatagactttgttaagctcgccggacgaggactttgaaatatcccaaatgaagattctacttccattgcatgacgagcaggcgtgatcagtt |
44007479 |
T |
|
| Q |
101 |
gccatcgtctgacaaatgcaaaacatgcctagcaaagatcggagaaattttacaatatctcaactttctgtggatcgcctgacgtcacagattggtcgcc |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44007480 |
gccatcgtctgacaaatgcaaaacgtgcctagcaaagatcggataaattttacaatatctcaactttctgtggatcgcctgacgtcacagattggtcgcc |
44007579 |
T |
|
| Q |
201 |
tggcgacgcgataggattaggaccattaggcaagcannnnnnnaggcattaaggcagaaagtcgtccggtgaagcgatacgtttgcagatgatgacttaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
44007580 |
tggcgacgcgataggattaggaccattaggcaagcatttttttaggcattaaggcagaaagtcgtccggtgaagcgatacgtttgcagatgatgacgtaa |
44007679 |
T |
|
| Q |
301 |
atttcttatagtatttaaatgtttttgtgagattcaatattgttatggtattttggcattgtcaaaagaactataacattaatttggcaagctagaaagt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44007680 |
atttcttatagtatttaaatgtttttgtgagattcaatattgttatggtattttggcattgtcaaaagaactataacattaatttggcaagctagaaagt |
44007779 |
T |
|
| Q |
401 |
tgaagattcaacttctatcatgtgcattgtcatcaannnnnnncattgttatgtctaagatcacgagtagccaaatccctacatttagataaagaag |
497 |
Q |
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|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44007780 |
tgaagattcaacttctatcatgtgcattctcatcaatttttttcattgttatgtctaagatcacgagtagccaaatccctacatttagataaagaag |
44007876 |
T |
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