View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11787_low_68 (Length: 318)

Name: NF11787_low_68
Description: NF11787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11787_low_68
NF11787_low_68
[»] chr7 (77 HSPs)
chr7 (226-317)||(32057516-32057607)
chr7 (1-99)||(22270099-22270197)
chr7 (1-98)||(2647747-2647843)
chr7 (1-98)||(4796718-4796814)
chr7 (1-98)||(20284039-20284135)
chr7 (1-53)||(32358044-32358096)
chr7 (1-98)||(21988857-21988954)
chr7 (1-98)||(9190059-9190155)
chr7 (13-98)||(29159753-29159837)
chr7 (165-221)||(2360776-2360831)
chr7 (8-98)||(23403071-23403160)
chr7 (45-98)||(9235649-9235702)
chr7 (45-98)||(33332544-33332597)
chr7 (13-98)||(46516373-46516457)
chr7 (1-53)||(3259121-3259173)
chr7 (165-221)||(6430437-6430492)
chr7 (7-59)||(31519035-31519087)
chr7 (169-221)||(47675940-47675991)
chr7 (2-53)||(29608864-29608915)
chr7 (13-75)||(30814574-30814635)
chr7 (1-97)||(2580338-2580436)
chr7 (8-53)||(4508696-4508741)
chr7 (165-202)||(4510361-4510398)
chr7 (165-202)||(4512203-4512240)
chr7 (165-206)||(6359763-6359804)
chr7 (1-53)||(8359305-8359358)
chr7 (1-42)||(20344023-20344064)
chr7 (9-53)||(4510538-4510582)
chr7 (9-53)||(4512380-4512424)
chr7 (169-221)||(14069637-14069688)
chr7 (169-221)||(14379665-14379716)
chr7 (169-221)||(23555355-23555406)
chr7 (1-59)||(35854040-35854100)
chr7 (1-49)||(48599328-48599376)
chr7 (8-59)||(4253512-4253563)
chr7 (7-98)||(5817326-5817417)
chr7 (1-59)||(29991179-29991238)
chr7 (172-223)||(43864561-43864611)
chr7 (173-220)||(47673749-47673795)
chr7 (9-59)||(31105377-31105427)
chr7 (169-227)||(31732766-31732823)
chr7 (172-221)||(18126963-18127011)
chr7 (165-202)||(22270262-22270299)
chr7 (169-221)||(38671029-38671079)
chr7 (169-221)||(41648818-41648868)
chr7 (169-201)||(4179087-4179119)
chr7 (7-55)||(23344105-23344153)
chr7 (1-59)||(24789967-24790027)
chr7 (1-59)||(25766942-25767002)
chr7 (169-201)||(29991367-29991399)
chr7 (1-59)||(48408930-48408990)
chr7 (1-40)||(2390408-2390447)
chr7 (4-59)||(5513651-5513706)
chr7 (1-59)||(23555166-23555225)
chr7 (1-59)||(25615979-25616038)
chr7 (1-68)||(27347943-27348010)
chr7 (1-59)||(39731495-39731554)
chr7 (1-68)||(48489557-48489624)
chr7 (1-42)||(6592340-6592382)
chr7 (1-42)||(6594558-6594600)
chr7 (52-98)||(9185264-9185310)
chr7 (1-42)||(18388760-18388802)
chr7 (1-42)||(18392196-18392238)
chr7 (169-227)||(19502492-19502549)
chr7 (1-42)||(34310716-34310758)
chr7 (9-59)||(36574500-36574550)
chr7 (1-59)||(41317418-41317476)
chr7 (1-38)||(6432097-6432134)
chr7 (172-221)||(26417633-26417681)
chr7 (165-202)||(30814711-30814748)
chr7 (172-233)||(31105192-31105251)
chr7 (169-221)||(48489745-48489795)
chr7 (45-98)||(49091612-49091664)
chr7 (169-201)||(1113966-1113998)
chr7 (169-201)||(25616169-25616201)
chr7 (169-201)||(35854230-35854262)
chr7 (169-201)||(41317261-41317293)
[»] chr5 (65 HSPs)
chr5 (1-99)||(28278442-28278540)
chr5 (1-98)||(17004011-17004107)
chr5 (1-59)||(16452206-16452264)
chr5 (45-98)||(24553600-24553653)
chr5 (11-59)||(3075642-3075690)
chr5 (1-53)||(5058171-5058223)
chr5 (165-227)||(38747294-38747355)
chr5 (45-98)||(11181926-11181979)
chr5 (45-98)||(42127504-42127557)
chr5 (22-98)||(19588696-19588771)
chr5 (8-96)||(31300654-31300741)
chr5 (1-45)||(40147387-40147431)
chr5 (165-221)||(40147551-40147606)
chr5 (11-59)||(42927027-42927075)
chr5 (47-98)||(6741801-6741852)
chr5 (1-56)||(27015649-27015704)
chr5 (1-53)||(213591-213644)
chr5 (45-98)||(3880250-3880302)
chr5 (1-98)||(28832209-28832305)
chr5 (14-99)||(38747144-38747228)
chr5 (1-53)||(16640930-16640982)
chr5 (169-221)||(28750459-28750510)
chr5 (1-59)||(13239877-13239936)
chr5 (1-59)||(37439267-37439326)
chr5 (1-59)||(13695674-13695732)
chr5 (165-202)||(28278605-28278642)
chr5 (169-226)||(39468347-39468403)
chr5 (169-221)||(534072-534123)
chr5 (169-201)||(3075572-3075604)
chr5 (1-59)||(10593384-10593444)
chr5 (23-98)||(12084248-12084323)
chr5 (169-201)||(30682745-30682777)
chr5 (169-201)||(42428253-42428285)
chr5 (13-88)||(11917035-11917109)
chr5 (1-59)||(25412886-25412945)
chr5 (1-68)||(28750630-28750697)
chr5 (169-200)||(36073866-36073897)
chr5 (1-59)||(5887418-5887476)
chr5 (1-59)||(9049326-9049384)
chr5 (1-42)||(9789224-9789266)
chr5 (1-42)||(16409601-16409643)
chr5 (1-42)||(22536290-22536332)
chr5 (1-42)||(25078247-25078289)
chr5 (1-42)||(25136216-25136258)
chr5 (1-42)||(26170888-26170930)
chr5 (1-42)||(26178008-26178050)
chr5 (1-42)||(29751160-29751202)
chr5 (13-59)||(31183109-31183155)
chr5 (1-59)||(32636950-32637008)
chr5 (1-42)||(40380217-40380259)
chr5 (1-42)||(40382428-40382470)
chr5 (169-221)||(5887239-5887289)
chr5 (1-53)||(27637602-27637655)
chr5 (169-221)||(31183287-31183337)
chr5 (172-201)||(32637140-32637169)
chr5 (169-201)||(538334-538366)
chr5 (169-201)||(16409793-16409825)
chr5 (169-197)||(16649661-16649689)
chr5 (169-201)||(25413074-25413106)
chr5 (1-59)||(29720490-29720550)
chr5 (1-59)||(29722650-29722710)
chr5 (169-201)||(30182902-30182934)
chr5 (165-201)||(40751291-40751327)
chr5 (165-201)||(40763296-40763332)
chr5 (169-201)||(42426058-42426090)
[»] chr3 (63 HSPs)
chr3 (1-99)||(34491338-34491436)
chr3 (1-98)||(1417531-1417627)
chr3 (1-98)||(21711173-21711269)
chr3 (1-98)||(1736346-1736442)
chr3 (1-98)||(18552924-18553020)
chr3 (1-98)||(37466241-37466337)
chr3 (1-53)||(6095589-6095641)
chr3 (45-98)||(6794797-6794850)
chr3 (169-229)||(29682670-29682730)
chr3 (1-53)||(54593830-54593882)
chr3 (8-98)||(40592830-40592920)
chr3 (1-98)||(8370527-8370624)
chr3 (1-98)||(30709831-30709928)
chr3 (165-207)||(43403548-43403590)
chr3 (45-98)||(3328440-3328493)
chr3 (13-98)||(3716055-3716139)
chr3 (165-202)||(6095413-6095450)
chr3 (45-98)||(24695248-24695301)
chr3 (45-98)||(26298938-26298991)
chr3 (45-98)||(40844602-40844655)
chr3 (169-221)||(29813375-29813426)
chr3 (51-98)||(4387018-4387065)
chr3 (169-221)||(22834811-22834861)
chr3 (172-221)||(23391716-23391764)
chr3 (1-98)||(25795730-25795827)
chr3 (45-98)||(48438164-48438217)
chr3 (169-201)||(761158-761190)
chr3 (1-59)||(801218-801278)
chr3 (9-57)||(2075061-2075109)
chr3 (169-201)||(9635946-9635978)
chr3 (173-221)||(23410135-23410182)
chr3 (169-201)||(29196212-29196244)
chr3 (1-85)||(36029056-36029139)
chr3 (169-201)||(39153187-39153219)
chr3 (169-201)||(40734811-40734843)
chr3 (165-201)||(47304571-47304607)
chr3 (1-59)||(9581408-9581467)
chr3 (1-59)||(19683872-19683931)
chr3 (1-59)||(23197922-23197981)
chr3 (1-59)||(23200121-23200180)
chr3 (1-59)||(37408584-37408643)
chr3 (3-53)||(46860602-46860653)
chr3 (1-42)||(3617576-3617618)
chr3 (172-221)||(5236261-5236308)
chr3 (1-42)||(6716625-6716667)
chr3 (1-42)||(7762391-7762433)
chr3 (169-199)||(7762580-7762610)
chr3 (1-59)||(32891230-32891288)
chr3 (165-199)||(34491501-34491535)
chr3 (1-42)||(54635250-54635292)
chr3 (5-53)||(4570082-4570131)
chr3 (169-221)||(9666274-9666324)
chr3 (7-83)||(39040039-39040116)
chr3 (1-53)||(41819512-41819565)
chr3 (165-202)||(43401610-43401647)
chr3 (169-201)||(5257966-5257998)
chr3 (1-59)||(7779986-7780046)
chr3 (67-99)||(8126650-8126682)
chr3 (1-59)||(9636108-9636168)
chr3 (169-201)||(19683710-19683742)
chr3 (169-201)||(31314754-31314786)
chr3 (7-59)||(32744420-32744472)
chr3 (169-201)||(40735696-40735728)
[»] chr6 (60 HSPs)
chr6 (1-98)||(10077216-10077312)
chr6 (1-53)||(21589057-21589109)
chr6 (1-53)||(21593790-21593842)
chr6 (1-57)||(28137394-28137450)
chr6 (1-98)||(18232795-18232891)
chr6 (1-98)||(31979463-31979559)
chr6 (165-221)||(602907-602962)
chr6 (47-99)||(21801445-21801497)
chr6 (51-98)||(4629903-4629950)
chr6 (7-98)||(31936537-31936627)
chr6 (267-316)||(587863-587912)
chr6 (165-202)||(17758342-17758379)
chr6 (45-98)||(22963650-22963703)
chr6 (45-98)||(23824690-23824743)
chr6 (272-317)||(33691698-33691743)
chr6 (1-53)||(2972929-2972981)
chr6 (1-53)||(26830113-26830165)
chr6 (13-92)||(5572304-5572382)
chr6 (1-59)||(16452312-16452371)
chr6 (1-59)||(16569148-16569206)
chr6 (165-210)||(3808510-3808554)
chr6 (45-98)||(5017563-5017615)
chr6 (1-53)||(5043753-5043806)
chr6 (165-202)||(5043946-5043983)
chr6 (1-53)||(17763116-17763169)
chr6 (165-202)||(17763309-17763346)
chr6 (165-202)||(21589248-21589285)
chr6 (1-53)||(26800713-26800766)
chr6 (169-221)||(26954095-26954145)
chr6 (1-59)||(2171514-2171574)
chr6 (1-59)||(3072741-3072801)
chr6 (169-201)||(5408892-5408924)
chr6 (169-201)||(5413217-5413249)
chr6 (1-59)||(5406183-5406242)
chr6 (1-59)||(5410508-5410567)
chr6 (1-68)||(9183006-9183073)
chr6 (1-59)||(30834519-30834578)
chr6 (1-59)||(31404658-31404717)
chr6 (1-42)||(412228-412270)
chr6 (1-42)||(6097451-6097493)
chr6 (1-42)||(16578518-16578560)
chr6 (1-42)||(16616820-16616862)
chr6 (1-42)||(16653238-16653280)
chr6 (171-201)||(22963531-22963561)
chr6 (171-201)||(23824832-23824862)
chr6 (1-42)||(25421432-25421474)
chr6 (45-83)||(31086567-31086605)
chr6 (1-59)||(33211169-33211227)
chr6 (1-42)||(34167206-34167248)
chr6 (274-307)||(4085740-4085773)
chr6 (172-201)||(5406025-5406054)
chr6 (172-201)||(5410350-5410379)
chr6 (165-194)||(22424645-22424674)
chr6 (1-53)||(22424815-22424868)
chr6 (169-201)||(2171349-2171381)
chr6 (169-197)||(9182857-9182885)
chr6 (21-57)||(12221090-12221126)
chr6 (165-202)||(26829932-26829971)
chr6 (169-201)||(28137233-28137265)
chr6 (169-197)||(33160177-33160205)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-98)||(5633-5729)
scaffold0006 (1-98)||(2442-2538)
[»] chr1 (74 HSPs)
chr1 (1-98)||(775622-775718)
chr1 (1-98)||(13598348-13598444)
chr1 (1-98)||(19072877-19072974)
chr1 (1-98)||(19120767-19120864)
chr1 (1-98)||(29651761-29651857)
chr1 (1-53)||(13547079-13547131)
chr1 (1-53)||(13548990-13549042)
chr1 (1-53)||(37168424-37168476)
chr1 (1-96)||(47703987-47704081)
chr1 (1-97)||(47098875-47098970)
chr1 (13-97)||(47102904-47102987)
chr1 (13-98)||(9476211-9476295)
chr1 (45-98)||(27104466-27104519)
chr1 (5-53)||(193741-193789)
chr1 (1-49)||(11348824-11348872)
chr1 (1-53)||(31925697-31925749)
chr1 (1-98)||(16124567-16124664)
chr1 (1-53)||(28242430-28242483)
chr1 (1-53)||(47255329-47255382)
chr1 (1-52)||(29136373-29136425)
chr1 (1-53)||(37876756-37876808)
chr1 (1-59)||(8550770-8550829)
chr1 (1-83)||(26644948-26645031)
chr1 (47-98)||(50521199-50521250)
chr1 (1-59)||(834151-834209)
chr1 (1-51)||(7482222-7482272)
chr1 (1-59)||(15820433-15820491)
chr1 (1-59)||(36683806-36683864)
chr1 (169-221)||(833974-834024)
chr1 (169-221)||(8550588-8550638)
chr1 (165-202)||(19754783-19754820)
chr1 (165-206)||(42297786-42297827)
chr1 (1-59)||(20622219-20622279)
chr1 (169-201)||(20762982-20763014)
chr1 (173-221)||(28220030-28220077)
chr1 (169-221)||(28223225-28223276)
chr1 (1-59)||(40282503-40282563)
chr1 (169-201)||(49918664-49918696)
chr1 (12-59)||(927960-928007)
chr1 (1-59)||(3189456-3189515)
chr1 (1-59)||(3198273-3198332)
chr1 (1-59)||(3207112-3207171)
chr1 (8-59)||(4552621-4552672)
chr1 (1-68)||(28220201-28220268)
chr1 (1-59)||(8871046-8871104)
chr1 (1-42)||(9987327-9987369)
chr1 (1-42)||(13316352-13316394)
chr1 (1-59)||(28265538-28265596)
chr1 (166-196)||(29136566-29136596)
chr1 (1-31)||(34603703-34603733)
chr1 (172-221)||(37503366-37503413)
chr1 (1-42)||(44203758-44203800)
chr1 (1-59)||(46065044-46065102)
chr1 (169-202)||(196731-196764)
chr1 (169-221)||(3189658-3189708)
chr1 (169-221)||(3198475-3198525)
chr1 (169-221)||(3207314-3207364)
chr1 (169-218)||(13137787-13137835)
chr1 (165-202)||(19752973-19753010)
chr1 (172-201)||(28265381-28265410)
chr1 (45-97)||(32889389-32889442)
chr1 (169-221)||(40122005-40122055)
chr1 (169-221)||(45644162-45644212)
chr1 (5-49)||(47115302-47115347)
chr1 (165-202)||(47255154-47255191)
chr1 (1-59)||(9036542-9036602)
chr1 (165-202)||(13548815-13548854)
chr1 (8-56)||(19754628-19754676)
chr1 (1-59)||(21054084-21054144)
chr1 (11-59)||(23555250-23555298)
chr1 (169-221)||(37559668-37559719)
chr1 (165-202)||(37876577-37876616)
chr1 (169-201)||(50167002-50167034)
chr1 (169-201)||(50169037-50169069)
[»] chr2 (57 HSPs)
chr2 (22-98)||(16940281-16940356)
chr2 (22-98)||(17010946-17011021)
chr2 (1-98)||(20522170-20522266)
chr2 (1-53)||(35446874-35446926)
chr2 (1-98)||(10445495-10445591)
chr2 (13-98)||(33528684-33528768)
chr2 (7-93)||(21629899-21629984)
chr2 (45-98)||(33118086-33118139)
chr2 (1-45)||(45727055-45727099)
chr2 (169-221)||(6594808-6594858)
chr2 (45-98)||(17865153-17865206)
chr2 (7-83)||(36757819-36757896)
chr2 (1-53)||(1631722-1631774)
chr2 (169-221)||(11690801-11690852)
chr2 (47-98)||(31055992-31056044)
chr2 (1-59)||(4503116-4503175)
chr2 (1-59)||(36988059-36988118)
chr2 (1-59)||(45099880-45099939)
chr2 (1-75)||(14699058-14699131)
chr2 (169-221)||(723551-723601)
chr2 (1-98)||(13569279-13569374)
chr2 (169-221)||(34139577-34139627)
chr2 (1-98)||(34682385-34682481)
chr2 (3-59)||(36205648-36205705)
chr2 (169-221)||(36987879-36987929)
chr2 (45-98)||(39482881-39482934)
chr2 (169-221)||(42362659-42362709)
chr2 (169-201)||(5723078-5723110)
chr2 (169-201)||(36773872-36773904)
chr2 (1-59)||(1345592-1345651)
chr2 (1-59)||(2334401-2334460)
chr2 (1-59)||(6594989-6595048)
chr2 (250-309)||(33004208-33004267)
chr2 (1-59)||(723728-723786)
chr2 (1-42)||(6266817-6266859)
chr2 (169-227)||(11151393-11151450)
chr2 (1-59)||(11151575-11151633)
chr2 (1-42)||(12647386-12647428)
chr2 (1-59)||(17057353-17057411)
chr2 (1-59)||(17085336-17085394)
chr2 (13-98)||(23078533-23078618)
chr2 (1-42)||(32289690-32289732)
chr2 (1-59)||(34139754-34139812)
chr2 (1-83)||(34388823-34388904)
chr2 (9-59)||(36317993-36318043)
chr2 (1-98)||(8040010-8040106)
chr2 (13-98)||(8390213-8390296)
chr2 (169-221)||(24885899-24885949)
chr2 (169-202)||(29868182-29868215)
chr2 (169-221)||(33162258-33162308)
chr2 (1-53)||(33648298-33648351)
chr2 (176-221)||(36317817-36317861)
chr2 (169-201)||(2334240-2334272)
chr2 (1-53)||(7451244-7451295)
chr2 (169-201)||(14633650-14633682)
chr2 (169-201)||(36205487-36205519)
chr2 (165-202)||(45727245-45727284)
[»] chr8 (54 HSPs)
chr8 (1-98)||(9765870-9765967)
chr8 (1-98)||(23799628-23799724)
chr8 (1-53)||(42434981-42435033)
chr8 (1-98)||(4696647-4696743)
chr8 (4-53)||(4283653-4283702)
chr8 (1-98)||(26403281-26403377)
chr8 (7-59)||(1292448-1292500)
chr8 (22-98)||(6813632-6813708)
chr8 (1-53)||(11384111-11384163)
chr8 (1-53)||(18655526-18655578)
chr8 (169-221)||(15213100-15213151)
chr8 (1-59)||(17982779-17982838)
chr8 (1-59)||(31218383-31218442)
chr8 (1-59)||(42498320-42498379)
chr8 (1-68)||(43036549-43036616)
chr8 (9-47)||(4162630-4162668)
chr8 (5-59)||(10015209-10015263)
chr8 (13-98)||(5702546-5702630)
chr8 (45-98)||(19752488-19752541)
chr8 (169-221)||(41366422-41366472)
chr8 (169-201)||(3303493-3303525)
chr8 (169-201)||(5689581-5689613)
chr8 (169-201)||(17982967-17982999)
chr8 (169-201)||(30143654-30143686)
chr8 (1-59)||(1746202-1746261)
chr8 (1-68)||(4731784-4731851)
chr8 (1-68)||(4733832-4733899)
chr8 (1-68)||(15212912-15212979)
chr8 (169-200)||(34254154-34254185)
chr8 (1-59)||(34254314-34254373)
chr8 (169-200)||(34256330-34256361)
chr8 (1-59)||(34256490-34256549)
chr8 (169-220)||(43036736-43036786)
chr8 (1-59)||(3303654-3303712)
chr8 (1-59)||(4743198-4743256)
chr8 (13-59)||(8965675-8965721)
chr8 (1-42)||(25690080-25690122)
chr8 (13-98)||(6127170-6127255)
chr8 (169-221)||(6599279-6599329)
chr8 (169-221)||(6674732-6674782)
chr8 (8-57)||(8153891-8153940)
chr8 (1-53)||(10930188-10930241)
chr8 (169-221)||(12702435-12702485)
chr8 (269-306)||(42006170-42006207)
chr8 (1-40)||(2627862-2627902)
chr8 (11-59)||(3073858-3073906)
chr8 (47-83)||(4455991-4456027)
chr8 (169-201)||(4731972-4732004)
chr8 (169-201)||(4743050-4743082)
chr8 (169-201)||(19945181-19945213)
chr8 (1-57)||(27811404-27811460)
chr8 (169-201)||(31218571-31218603)
chr8 (169-201)||(42498509-42498541)
chr8 (169-201)||(44304169-44304201)
[»] chr4 (73 HSPs)
chr4 (1-98)||(10047329-10047425)
chr4 (1-98)||(36315280-36315376)
chr4 (1-98)||(36329489-36329585)
chr4 (1-98)||(39245944-39246040)
chr4 (1-53)||(6656082-6656134)
chr4 (22-98)||(42599646-42599721)
chr4 (7-98)||(54867134-54867224)
chr4 (1-53)||(8648265-8648317)
chr4 (7-59)||(24969797-24969849)
chr4 (1-53)||(41639552-41639604)
chr4 (1-53)||(41964542-41964594)
chr4 (1-53)||(50673837-50673889)
chr4 (1-59)||(6542163-6542221)
chr4 (13-98)||(3796582-3796667)
chr4 (45-98)||(24333759-24333812)
chr4 (45-98)||(25862116-25862169)
chr4 (1-53)||(46703627-46703680)
chr4 (1-59)||(31474277-31474335)
chr4 (165-202)||(2210036-2210073)
chr4 (13-98)||(5147627-5147711)
chr4 (1-98)||(5269242-5269338)
chr4 (1-98)||(38152490-38152585)
chr4 (165-202)||(50262509-50262546)
chr4 (1-53)||(8665534-8665586)
chr4 (169-221)||(26175440-26175491)
chr4 (1-83)||(5396722-5396805)
chr4 (1-59)||(56178620-56178679)
chr4 (13-59)||(51337202-51337248)
chr4 (1-53)||(379506-379559)
chr4 (1-98)||(3777500-3777595)
chr4 (1-98)||(5143209-5143305)
chr4 (172-221)||(12739357-12739405)
chr4 (13-99)||(21688387-21688471)
chr4 (170-227)||(37740940-37740996)
chr4 (165-202)||(41639742-41639779)
chr4 (173-221)||(47038220-47038266)
chr4 (169-221)||(48893447-48893497)
chr4 (169-221)||(56178440-56178490)
chr4 (7-55)||(5207830-5207878)
chr4 (169-221)||(12743732-12743783)
chr4 (169-201)||(29999651-29999683)
chr4 (1-44)||(29999804-29999848)
chr4 (1-59)||(31495298-31495358)
chr4 (1-53)||(35662567-35662619)
chr4 (11-59)||(37229705-37229753)
chr4 (1-53)||(40632571-40632623)
chr4 (169-201)||(48143362-48143394)
chr4 (169-221)||(52467161-52467212)
chr4 (13-98)||(6743478-6743562)
chr4 (1-68)||(12739525-12739592)
chr4 (1-59)||(13992276-13992335)
chr4 (1-83)||(16623344-16623426)
chr4 (1-68)||(26175611-26175678)
chr4 (1-59)||(48143169-48143228)
chr4 (1-59)||(52082647-52082706)
chr4 (1-59)||(52095346-52095404)
chr4 (1-42)||(8393520-8393562)
chr4 (1-42)||(8395729-8395771)
chr4 (165-199)||(21688560-21688594)
chr4 (1-59)||(47038395-47038453)
chr4 (1-59)||(48893622-48893680)
chr4 (7-59)||(5350040-5350093)
chr4 (172-201)||(5369904-5369933)
chr4 (1-53)||(12073518-12073571)
chr4 (169-229)||(54199704-54199762)
chr4 (1-53)||(54883146-54883199)
chr4 (169-221)||(9927262-9927313)
chr4 (13-69)||(12743899-12743955)
chr4 (13-69)||(12745288-12745344)
chr4 (169-201)||(29254806-29254838)
chr4 (169-201)||(34570236-34570268)
chr4 (169-201)||(45687009-45687041)
chr4 (169-201)||(46147218-46147250)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-53)||(10615-10667)
[»] scaffold0148 (1 HSPs)
scaffold0148 (45-98)||(10679-10732)
[»] scaffold0466 (2 HSPs)
scaffold0466 (1-53)||(7453-7505)
scaffold0466 (165-202)||(7642-7679)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-68)||(20390-20457)
scaffold0066 (169-197)||(20241-20269)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-59)||(434659-434718)
scaffold0002 (169-201)||(434848-434880)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-57)||(1041-1098)
[»] scaffold0176 (3 HSPs)
scaffold0176 (13-98)||(17213-17297)
scaffold0176 (165-202)||(17816-17853)
scaffold0176 (1-53)||(17993-18046)
[»] scaffold1668 (1 HSPs)
scaffold1668 (169-221)||(1305-1356)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-59)||(11683-11743)
scaffold0286 (169-201)||(11880-11912)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-59)||(8718-8777)
scaffold0491 (1-59)||(11144-11203)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-42)||(2604-2646)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-97)||(8470-8566)


Alignment Details
Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 32057516 - 32057607
Alignment:
Q  226 gtttccattcccacttttgaggaatagagagtagtgatcattacccaagaatcaacatgaagctccactttattaaaaccacaagctctagc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  32057516 gtttccattcccacttttgaggaatagagagtagtgatcattacccaagaatcaacataaagctccactttattaaaatcacaagctctagc 32057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22270099 - 22270197
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  22270099 tctcctccagagtaggtcaagttggaccgaactgggtgaacatctcttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatga 22270197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2647747 - 2647843
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||| ||||||||||| |||| | |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2647747 tctcccccagaataggtcatattgggccgaattgggtcaacaat-cttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatg 2647843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4796718 - 4796814
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  4796718 tctcccccagattaggtcattttggaccgaactgggttaacaat-cttggtgtgtttgttcctttctctcattgcttatctttattgctttgattatg 4796814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20284135 - 20284039
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  20284135 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatg 20284039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32358096 - 32358044
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32358096 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 32358044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21988954 - 21988857
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtaccttt-ctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||| |||||||  |||||||||| ||||| |||| | || ||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  21988954 tctcctccagattaggtcatattggaccgaactgggtcaacaat-ctcggtgtgtttgttccttttctttcattgcttatctttattgctttgattatg 21988857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9190059 - 9190155
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  9190059 tctcccccagactaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgctttgtttatg 9190155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 29159837 - 29159753
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  29159837 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatg 29159753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 2360831 - 2360776
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2360831 atacttgctccacacatcatagtttgtattggtgtgaa-ttttgagtccaaattcac 2360776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 23403071 - 23403160
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||| |||||||  || ||||||||||||| |||| | ||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  23403071 cagattaggtcatattagaccgaattgggtcaacaat-cttagtgtgtttgttcctttctttcattgcttatatttattgctttgattatg 23403160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 9235649 - 9235702
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  9235649 tcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatg 9235702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 33332544 - 33332597
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  33332544 tcttggtgtgtttgttcctttctttcattgcttatctttattgatttgattatg 33332597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 46516373 - 46516457
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||  ||||| ||||||||||||||||    
T  46516373 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatg 46516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3259121 - 3259173
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  3259121 tctcctccagagtaggtcaagttgaaccgaactgggtgaacatttcctggtgt 3259173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 6430437 - 6430492
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  6430437 atacttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 6430492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 31519035 - 31519087
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  31519035 ccagagtaggtcaagttggaccgaactggataaacatttcttggtgtgtttgt 31519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 47675991 - 47675940
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  47675991 ttgctccacacatcatagtttgtattggtgtg-agttttgtgtccgaattcac 47675940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 29608864 - 29608915
Alignment:
Q  2 ctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  29608864 ctcctccagagtaggtcaagttggaccgaactgagtgaatatttcttggtgt 29608915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 30814574 - 30814635
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgc 75  Q
    ||||||||||||||||||| ||||| |||| || ||||||||||||| |||||||||||||||    
T  30814574 taggtcaagttggaccgaactgggtcaacaatt-ttggtgtgtttgttcctttctttcattgc 30814635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2580436 - 2580338
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttcttt---cattgcatatctttattgctttgattat 97  Q
    ||||| ||||| |||||||  |||||||||||||||| |||| | |||||||||||||| ||| |||||   |||||| |||||||||||||||| ||||    
T  2580436 tctcccccagactaggtcatattggaccgaattgggtcaacaat-cttggtgtgtttgttcctctcttttttcattgcttatctttattgctttggttat 2580338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 4508741 - 4508696
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  4508741 cagagtaggttaagttggaccgaactgggtgaacatttcttggtgt 4508696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 4510398 - 4510361
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4510398 atacttgctccacacatcatagtttgtattggtgtgaa 4510361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 4512240 - 4512203
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4512240 atacttgctccacacatcatagtttgtattggtgtgaa 4512203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 6359804 - 6359763
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttt 206  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  6359804 atacttgctccacacatcatagtttgtattgatgtgaagttt 6359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8359358 - 8359305
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  8359358 tctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 8359305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20344023 - 20344064
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  20344023 tctcctccagagtaggtcaagttggaccgaactgggtgaaca 20344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 4510582 - 4510538
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  4510582 agagtaggtcaagttggaccgtactgggtgaacatttcttggtgt 4510538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 4512424 - 4512380
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  4512424 agagtaggtcaagttggaccgtactgggtgaacatttcttggtgt 4512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 14069688 - 14069637
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  14069688 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 14069637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 14379716 - 14379665
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  14379716 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 14379665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 23555355 - 23555406
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  23555355 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 23555406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35854040 - 35854100
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||||||    
T  35854040 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtgtttgt 35854100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48599376 - 48599328
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttg 49  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||    
T  48599376 tctcctccagagcagatcaagttggaccgaactgggtgaacatttcttg 48599328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 4253563 - 4253512
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||| |||||||||| | ||| |||||||||||||||||||||    
T  4253563 cagagtaggtcaatttggaccgaactaggtaaacatttcttggtgtgtttgt 4253512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 5817326 - 5817417
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||||  |||||||||| || || |||| |  ||||||||||||| |||||||| |||||| |||| ||||||  |||||||||    
T  5817326 ccagagtaggtcatattggaccgaactgagttaacaatctttggtgtgtttgttcctttcttacattgcttatcattattgtgttgattatg 5817417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29991179 - 29991238
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  29991179 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 29991238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 43864561 - 43864611
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcacta 223  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  43864561 ctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcacta 43864611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 47673795 - 47673749
Alignment:
Q  173 tccacacatcatagtttgtattggtgtgaagttttgtgtccaaattca 220  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  47673795 tccacacatcatagtttgtattggtgtg-agttttgtgtccgaattca 47673749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 31105427 - 31105377
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||| |||||||    
T  31105427 agagtagatcaagttggaccgaactgggtaaacatttcttggtctgtttgt 31105377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 31732823 - 31732766
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagt 227  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||| ||||||| |||||    
T  31732823 ttgctccacacatcatagtttgtactggtgtg-agttttgagtccgaattcacaacagt 31732766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 18126963 - 18127011
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  18126963 ctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 18127011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 22270262 - 22270299
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  22270262 atacttgctccacacatcatagtttgtattgctgtgaa 22270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 38671079 - 38671029
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  38671079 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 38671029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 41648868 - 41648818
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  41648868 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 41648818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 4179087 - 4179119
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  4179087 ttgctccacacatcatagtttgtattggtgtga 4179119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 23344105 - 23344153
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgt 55  Q
    |||||||||||||||||||||||||   ||| |||||||||||||||||    
T  23344105 ccagagtaggtcaagttggaccgaacaaggtaaacatttcttggtgtgt 23344153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24789967 - 24790027
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  24789967 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 24790027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25767002 - 25766942
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| || ||||||| ||||||||| || |||||||||||||||    
T  25767002 tctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgtgtttgt 25766942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 29991367 - 29991399
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  29991367 ttgctccacacatcatagtttgtattggtgtga 29991399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48408930 - 48408990
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    |||||||||||||| |||||| || ||||||| ||||||||| ||||||||||||||||||    
T  48408930 tctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgtgtttgt 48408990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2390408 - 2390447
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaa 40  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  2390408 tctcctccagagtaggtcaagttggaccgaactaggtgaa 2390447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 5513706 - 5513651
Alignment:
Q  4 cctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||||||  ||||||||    
T  5513706 cctccagagtaggtcaatttggactgaactgggtaaacatttcttgacgtgtttgt 5513651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23555166 - 23555225
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||| |||||||||    
T  23555166 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt 23555225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25615979 - 25616038
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |  |||||||||||||    
T  25615979 tctcctccagagtaggtcaagtttggaccgaactgggcgaacaatctttggtgtgtttgt 25616038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27347943 - 27348010
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  27347943 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctctt 27348010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39731495 - 39731554
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||||||| |||||    
T  39731495 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgt 39731554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48489557 - 48489624
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  48489557 tctcccccagattaggtcaagttggaccgaactgggtaaacaatctttggtgtgtttgttcctctctt 48489624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6592382 - 6592340
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6592382 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6594600 - 6594558
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6594600 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6594558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 9185264 - 9185310
Alignment:
Q  52 gtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  9185264 gtgtttgttcctctctttcattgcttatctttattgctttgtttatg 9185310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18388802 - 18388760
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  18388802 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18392238 - 18392196
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  18392238 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18392196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 19502492 - 19502549
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagt 227  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||  ||||||| |||||    
T  19502492 ttgctccacacatcatagtttgtattagtgtg-agttttgagtctgaattcacaacagt 19502549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34310758 - 34310716
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  34310758 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 34310716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 36574550 - 36574500
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||| ||||||| || ||||| ||||||||||| |||||||||    
T  36574550 agagtaggtcaatttggaccaaactgggtaaacatttcttgatgtgtttgt 36574500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41317476 - 41317418
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  41317476 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 41317418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6432097 - 6432134
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtg 38  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  6432097 tctccttcagagtaggtcaagttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 26417633 - 26417681
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||| ||||||||||||||||||||| ||||||| |||| |||||||    
T  26417633 ctccacatatcatagtttgtattggtgtg-agttttgagtccgaattcac 26417681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 30814711 - 30814748
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  30814711 atacttgctccacacatcatattttgtactggtgtgaa 30814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 31105251 - 31105192
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagtttccat 233  Q
    |||||||||||||||||| |||||||||| |||||||||| | ||||||| |||| ||||||    
T  31105251 ctccacacatcatagttt-tattggtgtg-agttttgtgttcgaattcacaacagattccat 31105192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 48489745 - 48489795
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||| ||||||||||||  ||||| |||| |||||||    
T  48489745 ttgctccacacatcatagttggtattggtgtga--ttttgagtccgaattcac 48489795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 49091664 - 49091612
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||| |||||| ||||||||||||||| |||||||  |||||||||||||    
T  49091664 tcttggtgcgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 49091612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 1113966 - 1113998
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||| |||||    
T  1113966 ttgctccacacatcatagtttgtattgatgtga 1113998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 25616169 - 25616201
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||| ||||||||||||||||||||||||    
T  25616169 ttgctccatacatcatagtttgtattggtgtga 25616201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 35854230 - 35854262
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||| ||||||    
T  35854230 ttgctccacacatcatagtttgtatttgtgtga 35854262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 41317293 - 41317261
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||| ||||||||||||||||||||||||    
T  41317293 ttgctccaaacatcatagtttgtattggtgtga 41317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28278442 - 28278540
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |  |||||||||||||| |||||||||||||||||||||||    
T  28278442 tctcctccagagtaggtcaagttggaccgaactgggtgaacaattcttggtgtgtttctttctttctttcattgcttatctttattgctttgattatga 28278540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17004011 - 17004107
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  17004011 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatcttttttgctttgattatg 17004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16452206 - 16452264
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  16452206 tctcccccagagtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgt 16452264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 24553600 - 24553653
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  24553600 tcttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 24553653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 3075690 - 3075642
Alignment:
Q  11 agtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3075690 agtaggtcaagttggaccaaattgggtgaacatttcttggtgtgtttgt 3075642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5058171 - 5058223
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  5058171 tctcctctagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 5058223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 38747294 - 38747355
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagt 227  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||    
T  38747294 atacttgctccacacatcatagtttgtattggtgtgaa-atttgagtccaaattcacaacagt 38747355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 11181926 - 11181979
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  11181926 tcttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatg 11181979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 42127504 - 42127557
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  42127504 tcttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatg 42127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 19588771 - 19588696
Alignment:
Q  22 ttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||| ||||| |||| | ||| | |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  19588771 ttggaccgaactgggtcaacaat-ctttgagtgtttgttcctttctttcattgcttatctttattgctttgattatg 19588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 31300654 - 31300741
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgatta 96  Q
    |||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| ||||||||||| ||||||||    
T  31300654 cagactaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgttttgatta 31300741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40147387 - 40147431
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacattt 45  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  40147387 tctcctccagagtaggtcaagttggaccgaactgggtgaacattt 40147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 40147551 - 40147606
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  40147551 atacttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 40147606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 42927027 - 42927075
Alignment:
Q  11 agtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  42927027 agtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgt 42927075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 6741852 - 6741801
Alignment:
Q  47 ttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  6741852 ttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatg 6741801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27015649 - 27015704
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtt 56  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27015649 tctcctccaaaataggtcaagttggaccgaactgggtgaacattttttggtgtgtt 27015704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 213591 - 213644
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  213591 tctcctccatagtaggtcaagtttggaccgaactgggtgaacatttcttggtgt 213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 3880302 - 3880250
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  3880302 tcttggtgtgtt-gttcctttctttcattgcttatctttattgctttgattatg 3880250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28832305 - 28832209
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  ||||||||||  |||| |||| | ||||||||||||||   ||||||||||||| ||||||||||| ||||||||||    
T  28832305 tctcccccagattaggtcatattggaccgaaccgggtcaacaat-cttggtgtgtttgtttgtttctttcattgcttatctttattgatttgattatg 28832209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 38747144 - 38747228
Alignment:
Q  14 aggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||||||| || ||||| || | | |||||||  ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  38747144 aggtcaagttggaccaaactgggtcaataat-cttggtggatttgttcctttctttaattgcttatctttattgctttgattatga 38747228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16640982 - 16640930
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||||| || ||||| ||||| |||||||||||||||    
T  16640982 tctcctccagagtaggtcaagtagggccgaactgggtaaacatttcttggtgt 16640930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 28750510 - 28750459
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  28750510 ttgctccacacatcataatttgtattggtgtg-agttttgagtccaaattcac 28750459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13239877 - 13239936
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||||||| || |||||||| |||||||||| || |||||||||||||    
T  13239877 tctcctccagagtaggtcaaatttggaccgaactgggtgaacaatttttggtgtgtttgt 13239936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37439267 - 37439326
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  37439267 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 37439326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13695732 - 13695674
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||| |||||||||| ||||||| || | ||| |||||||||||||||||||||    
T  13695732 tctcctccatagtaggtcaacttggaccaaactaggtaaacatttcttggtgtgtttgt 13695674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 28278605 - 28278642
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28278605 atacttgctccacacatcatattttgtattggtgtgaa 28278642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 39468403 - 39468347
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacag 226  Q
    ||||||||||||||||||||||||||||||| |||||||| || | ||||||| ||||    
T  39468403 ttgctccacacatcatagtttgtattggtgt-aagttttgagttcgaattcacaacag 39468347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 534072 - 534123
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||| |||||||    
T  534072 ttgctccacacatcatagtttctattggtgtg-agttttgagtccgaattcac 534123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 3075604 - 3075572
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  3075604 ttgctccacacatcatagtttgtattggtgtga 3075572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10593384 - 10593444
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  10593384 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 10593444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 12084248 - 12084323
Alignment:
Q  23 tggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||| ||||| |||| | | ||||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  12084248 tggaccgaactgggtcaacaatattttggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 12084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 30682777 - 30682745
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  30682777 ttgctccacacatcatagtttgtattggtgtga 30682745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 42428285 - 42428253
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  42428285 ttgctccacacatcatagtttgtattggtgtga 42428253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 11917035 - 11917109
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgc 88  Q
    |||||||  |||||||||| ||||| |||| | || ||||||||||| ||||||| ||||||| ||||||||||||    
T  11917035 taggtcatattggaccgaactgggtcaacaat-ctcggtgtgtttgttcctttctctcattgcttatctttattgc 11917109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25412886 - 25412945
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| |  |||||||||||||    
T  25412886 tctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtgtttgt 25412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28750697 - 28750630
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||||||||| || | |  ||||||||||||| ||| ||||    
T  28750697 tctcccccagattaggtcaagttggaccgaattgggtcaataatctttggtgtgtttgttcctctctt 28750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 36073897 - 36073866
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtg 200  Q
    ||||||||||||||||||||||||||||||||    
T  36073897 ttgctccacacatcatagtttgtattggtgtg 36073866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5887476 - 5887418
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||||||| | |||| |  |||||||||||||    
T  5887476 tctcccccagattaggtcaagttggaccgaattggatcaacaatctttggtgtgtttgt 5887418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9049384 - 9049326
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||| ||||||| ||||||||||||| ||| | ||||||| |||||||||||||    
T  9049384 tctcccccaaagtaggtgaagttggaccgaaatggataaacattttttggtgtgtttgt 9049326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9789266 - 9789224
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  9789266 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9789224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16409601 - 16409643
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  16409601 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22536332 - 22536290
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  22536332 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 22536290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25078247 - 25078289
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  25078247 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25136216 - 25136258
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  25136216 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25136258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26170888 - 26170930
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  26170888 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26178008 - 26178050
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  26178008 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29751202 - 29751160
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  29751202 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 29751160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 31183109 - 31183155
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||| ||||| ||||||  |||||||||||||    
T  31183109 taggtcaagttggaccgaactgggtcaacattctttggtgtgtttgt 31183155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32636950 - 32637008
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  32636950 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 32637008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40380217 - 40380259
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  40380217 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40380259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40382428 - 40382470
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  40382428 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 5887289 - 5887239
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||| |||||||    
T  5887289 ttgctccacatatcatagtttgtattggtgtga--ttttgagtccgaattcac 5887239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 27637655 - 27637602
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||| ||||||||||||  ||||||||||| |||||||| ||||||||||||    
T  27637655 tctcctgcagagtaggtcattgttggaccgaactgggtgaatatttcttggtgt 27637602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 31183287 - 31183337
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||| ||||||||||||||||  ||||| |||| |||||||    
T  31183287 ttgctccacacatcatggtttgtattggtgtga--ttttgagtccgaattcac 31183337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 32637140 - 32637169
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||    
T  32637140 ctccacacatcatagtttgtattggtgtga 32637169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 538334 - 538366
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||| |||||||||||    
T  538334 ttgctccacacatcatagtttatattggtgtga 538366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 16409793 - 16409825
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||| |||||||||||||||    
T  16409793 ttgctccacacatcatactttgtattggtgtga 16409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 16649689 - 16649661
Alignment:
Q  169 ttgctccacacatcatagtttgtattggt 197  Q
    |||||||||||||||||||||||||||||    
T  16649689 ttgctccacacatcatagtttgtattggt 16649661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 25413074 - 25413106
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||| ||||||||||||    
T  25413074 ttgctccacacatcatagttcgtattggtgtga 25413106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29720490 - 29720550
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||| ||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  29720490 tctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 29720550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29722650 - 29722710
Alignment:
Q  1 tctcctccagagtaggtc-aagttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    |||||||||||||||||| || |||||||||| ||||||||| || ||||||||| |||||    
T  29722650 tctcctccagagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgtctttgt 29722710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 30182902 - 30182934
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||| |||||||||    
T  30182902 ttgctccacacatcatagtttgttttggtgtga 30182934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 40751291 - 40751327
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  40751291 atacttactccacaaatcatagtttgtattggtgtga 40751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 40763296 - 40763332
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||| |||||||||| |||||||||||    
T  40763296 atacttgctccacagatcatagtttatattggtgtga 40763332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 42426090 - 42426058
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||| ||||||    
T  42426090 ttgctccacacatcatagtttgtatttgtgtga 42426058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34491338 - 34491436
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  34491338 tctcctccagagtaggtcaagttggaccgaactgggtgaacaatctttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatga 34491436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1417531 - 1417627
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  1417531 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatg 1417627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21711269 - 21711173
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  21711269 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatg 21711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1736346 - 1736442
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| |  ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  1736346 tctcccccagattaggtcatattggaccgaactgggtcaacaata-ttggtgtgtttgttcctttctttcattgcttatgtttattgctttgattatg 1736442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18552924 - 18553020
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  18552924 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtatttgttcctttctttcattgattatctttattgctttgattatg 18553020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37466337 - 37466241
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| || || |||| | |||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  37466337 tctcccccagattaggtcatattggaccgaactgtgtcaacaat-cttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatg 37466241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6095641 - 6095589
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  6095641 tctcctccagagtaggtcaagttggaccgaactgtgtgaacatttcttggtgt 6095589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 6794797 - 6794850
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  6794797 tcttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatg 6794850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 29682670 - 29682730
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagttt 229  Q
    |||||||||||||||||||||||||||||||||  |||||||||  ||||||| |||||||    
T  29682670 ttgctccacacatcatagtttgtattggtgtgattttttgtgtcggaattcacaacagttt 29682730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54593830 - 54593882
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  54593830 tctcctccagagtatgtcaagttggaccaaactgggtgaacatttcttggtgt 54593882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 40592830 - 40592920
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtaccttt-ctttcattgcatatctttattgctttgattatg 98  Q
    |||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||| |||||||||| ||||| ||||||||||||||||    
T  40592830 cagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttccttttctttcattgcttatctatattgctttgattatg 40592920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8370527 - 8370624
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | | ||||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  8370527 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 8370624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 30709831 - 30709928
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | | ||||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  30709831 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 30709928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 43403590 - 43403548
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagtttt 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  43403590 atacttgctccacacatcatagtttgtattggtgtgaaatttt 43403548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 3328440 - 3328493
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  3328440 tcttggtgtgtttgttcctctctttcattgcttatctttattgttttgattatg 3328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 3716055 - 3716139
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| ||||||||||| | ||||||||    
T  3716055 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgttgtgattatg 3716139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 6095450 - 6095413
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6095450 atacttgctccacacatcatagtttgtattggtgtgaa 6095413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 24695248 - 24695301
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| | ||||||||||||  ||||||||||||||||||||||    
T  24695248 tcttggtgtgtttgttcatttctttcattgtttatctttattgctttgattatg 24695301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 26298991 - 26298938
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||    
T  26298991 tcttggtgtgtttgttcctctctttcgttgcttatctttattgctttgattatg 26298938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 40844655 - 40844602
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||| || | ||||||||||||| ||||||||||||||||||||||    
T  40844655 tcttggtgtgttcgttcatttctttcattgcttatctttattgctttgattatg 40844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 29813375 - 29813426
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  29813375 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 29813426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 4387018 - 4387065
Alignment:
Q  51 tgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  4387018 tgtgtttgttcctttctttcattgcttatctttattgttttgattatg 4387065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22834861 - 22834811
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  22834861 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 22834811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 23391764 - 23391716
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||    
T  23391764 ctccacacatcatagtttgtattggtgtg-agttttgtgttcgaattcac 23391716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25795827 - 25795730
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| | ||| |||| |  ||||||||||||| | ||||||||||||| ||| ||||||| ||| ||||||    
T  25795827 tctcccccagattaggtcatattggaccgaactaggtcaacaatctttggtgtgtttgttcatttctttcattgcttatttttattgtttttattatg 25795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 48438217 - 48438164
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||    
T  48438217 tcttggtgtgtttgttcctttctgtcattgtttatctttattgttttgattatg 48438164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 761158 - 761190
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  761158 ttgctccacacatcatagtttgtattggtgtga 761190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 801218 - 801278
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  801218 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 801278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 2075109 - 2075061
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    |||||||||||||||||| |||| ||||| ||||||||| |||||||||    
T  2075109 agagtaggtcaagttggatcgaactgggtaaacatttctgggtgtgttt 2075061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 9635978 - 9635946
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  9635978 ttgctccacacatcatagtttgtattggtgtga 9635946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 23410182 - 23410135
Alignment:
Q  173 tccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  23410182 tccacacatcatagtttgtattgatgtg-agttttgtgtccgaattcac 23410135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 29196244 - 29196212
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  29196244 ttgctccacacatcatagtttgtattggtgtga 29196212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36029139 - 36029056
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttat 85  Q
    ||||| ||||| |||||||  |||||| ||| ||||| |||| | || ||||||||||| ||||||||||||||| |||||||||    
T  36029139 tctcccccagattaggtcatattggacagaactgggtcaacaat-ctcggtgtgtttgttcctttctttcattgcttatctttat 36029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 39153219 - 39153187
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  39153219 ttgctccacacatcatagtttgtattggtgtga 39153187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 40734811 - 40734843
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  40734811 ttgctccacacatcatagtttgtattggtgtga 40734843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 47304571 - 47304607
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||| |||||    
T  47304571 atacttgctccacacatcatagtttgtattgttgtga 47304607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9581408 - 9581467
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||| |||||||||    
T  9581408 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt 9581467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19683931 - 19683872
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  19683931 tctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 19683872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23197981 - 23197922
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||||||| |||||    
T  23197981 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgt 23197922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23200180 - 23200121
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||||||| |||||    
T  23200180 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgt 23200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37408584 - 37408643
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||||| |||| |||||||||| |  |||||||||||||    
T  37408584 tctcctccagagtaggtcaagtttggatcgaactgggtgaacaatctttggtgtgtttgt 37408643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 46860602 - 46860653
Alignment:
Q  3 tcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||  ||||||||||||||| ||||||||| |||||||    
T  46860602 tcctccagagtaggtcattgttggaccgaattggatgaacattttttggtgt 46860653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3617576 - 3617618
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  3617576 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 3617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 5236308 - 5236261
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  5236308 ctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 5236261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6716625 - 6716667
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6716625 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7762391 - 7762433
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  7762391 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 7762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 199
Target Start/End: Original strand, 7762580 - 7762610
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgt 199  Q
    |||||||||||||||||||||||||||||||    
T  7762580 ttgctccacacatcatagtttgtattggtgt 7762610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32891230 - 32891288
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| || |||||||||| ||||||||||| ||| | | |||||||||||||||||||    
T  32891230 tctcccccggagtaggtcatgttggaccgaactggataatcatttcttggtgtgtttgt 32891288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 34491501 - 34491535
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgt 199  Q
    ||||||||||||||||| |||||||||||||||||    
T  34491501 atacttgctccacacattatagtttgtattggtgt 34491535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54635250 - 54635292
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  54635250 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 54635292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4570082 - 4570131
Alignment:
Q  5 ctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||| ||||| |||||||| ||||| |||||||||||||||    
T  4570082 ctccagagtaggtgaagtttggaccgaactgggtcaacatttcttggtgt 4570131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9666324 - 9666274
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||| |||||||    
T  9666324 ttgctccacagatcatagtttgtattggtgtga--ttttgagtccgaattcac 9666274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 39040039 - 39040116
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||| |||||||  |||||||||| | ||| |||| | | ||||||||||||| ||||||||||||||| |||||||    
T  39040039 ccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatcttt 39040116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41819565 - 41819512
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  |||||||| || ||||||||||||| |||||||    
T  41819565 tctcctccagagtaggtcattgttggaccaaactgggtgaacatttattggtgt 41819512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 43401647 - 43401610
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  43401647 atacttgctccacagatcatagttggtattggtgtgaa 43401610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 5257998 - 5257966
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||| ||||||||||||    
T  5257998 ttgctccacacatcatagttcgtattggtgtga 5257966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7780046 - 7779986
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||||||| || ||||||||| || ||||||||| |||||    
T  7780046 tctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgt 7779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 8126682 - 8126650
Alignment:
Q  67 tttcattgcatatctttattgctttgattatga 99  Q
    ||||||||| |||||||||||||||||||||||    
T  8126682 tttcattgcttatctttattgctttgattatga 8126650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9636168 - 9636108
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||| ||||||||||| ||| |||||| ||||||||| || |||||||||||||||    
T  9636168 tctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgtgtttgt 9636108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 19683742 - 19683710
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||| ||||||||||||||||||||||||    
T  19683742 ttgctccaaacatcatagtttgtattggtgtga 19683710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 31314754 - 31314786
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||| ||||||||||||||||||||||||    
T  31314754 ttgctccatacatcatagtttgtattggtgtga 31314786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 32744472 - 32744420
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  32744472 ccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 32744420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 40735696 - 40735728
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||| |||||||||||||||    
T  40735696 ttgctccacacatcataatttgtattggtgtga 40735728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10077216 - 10077312
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10077216 tctcccccagattaggtcatattggaccgaattgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 10077312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21589057 - 21589109
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21589057 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 21589109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21593790 - 21593842
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21593790 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 21593842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28137450 - 28137394
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  28137450 tctcccccagagtaggtcaagttggaccgaattgtgtgaacatttcttggtatgttt 28137394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18232891 - 18232795
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  ||||||||| ||| || |||| | |||||||||||||| ||| |||||||| || ||||||||||||||||||||||    
T  18232891 tctcccccagattaggtcatattggaccgatttgagtcaacaat-cttggtgtgtttgttcctctctttcatcgcttatctttattgctttgattatg 18232795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31979559 - 31979463
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| || ||||  |||||||||| ||||| |||| | |||||||||||||| ||| | ||||||||| ||||||||||||||||||||||    
T  31979559 tctcccccagattatgtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctatttcattgcttatctttattgctttgattatg 31979463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 602962 - 602907
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  602962 atacttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 602907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 21801445 - 21801497
Alignment:
Q  47 ttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  21801445 ttggtgtgtttgttcctttctttcattacttatctttattgctttgattatga 21801497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 4629950 - 4629903
Alignment:
Q  51 tgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  4629950 tgtgtttgttcctttctttcattgcttatctttattgctttgattatg 4629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 31936627 - 31936537
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| |||||||  |||||||||| | ||| |||| | |||||||||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  31936627 ccagactaggtcatattggaccgaactaggtcaacaat-cttggtgtgtttgttcctatctttcattgcttatctttattgctttgtttatg 31936537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 587912 - 587863
Alignment:
Q  267 tacccaagaatcaacatgaagctccactttattaaaaccacaagctctag 316  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  587912 tacccaagaatcaacatgaagctccactctattaaatccactagctctag 587863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 17758342 - 17758379
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17758342 atacttgctccacacatcatagtttgtattggtgtgaa 17758379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 22963703 - 22963650
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| |||||||||||| || ||||| ||||||||||||||||    
T  22963703 tcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatg 22963650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 23824690 - 23824743
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| |||||||||||| || ||||| ||||||||||||||||    
T  23824690 tcttggtgtgtttgttcctttctttcatagcttatctctattgctttgattatg 23824743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 33691698 - 33691743
Alignment:
Q  272 aagaatcaacatgaagctccactttattaaaaccacaagctctagc 317  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  33691698 aagaatcaacatgaagctccactctattaaaaccacgagctctagc 33691743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2972981 - 2972929
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| ||||||||||||||| ||||||| | |||||||||||||||||||    
T  2972981 tctcctcaagagtaggtcaagttcgaccgaactaggtgaacatttcttggtgt 2972929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26830165 - 26830113
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||    
T  26830165 tctcctccaaagtaggtcaagtttgactgaactgggtgaacatttcttggtgt 26830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 5572304 - 5572382
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttg 92  Q
    |||||||  |||||||||||||||| |||| | |||||||||||||| | ||||||||| ||| ||| ||||||||||||    
T  5572304 taggtcatattggaccgaattgggtcaacaat-cttggtgtgtttgttcatttctttcactgcttatatttattgctttg 5572382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16452371 - 16452312
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  16452371 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 16452312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16569148 - 16569206
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  16569148 tctcctccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 16569206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 3808554 - 3808510
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttttgtg 210  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  3808554 atacttgctccacatatcatagtttgtattggtgtg-agttttgtg 3808510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 5017563 - 5017615
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  5017563 tcttggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 5017615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5043753 - 5043806
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||| |||||||||  ||||||||||| |||||||||||||||||||||    
T  5043753 tctcctccatagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 5043806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 5043946 - 5043983
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    |||| |||||||||||||||||||||||||||||||||    
T  5043946 atacgtgctccacacatcatagtttgtattggtgtgaa 5043983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17763116 - 17763169
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||| ||||||| |||||||| | |||||||||||||||||||    
T  17763116 tctcctccagagtagatcaagtttggaccgaactaggtgaacatttcttggtgt 17763169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 17763309 - 17763346
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  17763309 atacttgctccacacatcatagtttatattggtgtgaa 17763346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 21589248 - 21589285
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21589248 atacttgctccacacatcatagtttatattggtgtgaa 21589285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26800713 - 26800766
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| ||| |||||||||||||||||    
T  26800713 tctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgt 26800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 26954145 - 26954095
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  26954145 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 26954095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2171574 - 2171514
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  2171574 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 2171514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3072801 - 3072741
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  3072801 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 3072741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 5408924 - 5408892
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  5408924 ttgctccacacatcatagtttgtattggtgtga 5408892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 5413249 - 5413217
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  5413249 ttgctccacacatcatagtttgtattggtgtga 5413217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5406242 - 5406183
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||| |||||| |||||||||| |  |||||||||||||    
T  5406242 tctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgt 5406183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5410567 - 5410508
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||| |||||| |||||||||| |  |||||||||||||    
T  5410567 tctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgt 5410508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9183073 - 9183006
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||||||||| || |||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  9183073 tctcctccagattatgtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctctt 9183006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30834578 - 30834519
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||| | |  |||||||||||||    
T  30834578 tctcctccagagtaggtcaagtttggaccgaactgggtgaataatctttggtgtgtttgt 30834519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31404717 - 31404658
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |  |||||||||||||    
T  31404717 tctcctccagagtaggccaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 31404658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 412228 - 412270
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  412228 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 412270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6097493 - 6097451
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6097493 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16578560 - 16578518
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  16578560 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16578518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16616820 - 16616862
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  16616820 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16616862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16653238 - 16653280
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  16653238 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 16653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 22963561 - 22963531
Alignment:
Q  171 gctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||    
T  22963561 gctccacacatcatagtttgtattggtgtga 22963531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 23824832 - 23824862
Alignment:
Q  171 gctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||    
T  23824832 gctccacacatcatagtttgtattggtgtga 23824862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25421432 - 25421474
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  25421432 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 31086567 - 31086605
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  31086567 tcttggtgtgtttgttcctttctttcattgcttatcttt 31086605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33211227 - 33211169
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| |  ||||| |||||||    
T  33211227 tctcccccagagtaggtcaagttggaccgaactgggtcaacaatctttggtatgtttgt 33211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34167206 - 34167248
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  34167206 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 34167248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Original strand, 4085740 - 4085773
Alignment:
Q  274 gaatcaacatgaagctccactttattaaaaccac 307  Q
    ||||||||||||||||||||||||| ||||||||    
T  4085740 gaatcaacatgaagctccactttatgaaaaccac 4085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 5406054 - 5406025
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||    
T  5406054 ctccacacatcatagtttgtattggtgtga 5406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 5410379 - 5410350
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||    
T  5410379 ctccacacatcatagtttgtattggtgtga 5410350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 22424674 - 22424645
Alignment:
Q  165 atacttgctccacacatcatagtttgtatt 194  Q
    ||||||||||||||||||||||||||||||    
T  22424674 atacttgctccacacatcatagtttgtatt 22424645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22424868 - 22424815
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||| ||||||||||||  ||||||||| | |||||||||||||||||||||    
T  22424868 tctccttcagagtaggtcattgttggaccgtactgggtgaacatttcttggtgt 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 2171381 - 2171349
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||| ||||||||||||    
T  2171381 ttgctccacacatcatagttcgtattggtgtga 2171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 9182885 - 9182857
Alignment:
Q  169 ttgctccacacatcatagtttgtattggt 197  Q
    |||||||||||||||||||||||||||||    
T  9182885 ttgctccacacatcatagtttgtattggt 9182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 12221126 - 12221090
Alignment:
Q  21 gttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  12221126 gttggaccgaactgggtaaacatttcttggtgtgttt 12221090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 26829971 - 26829932
Alignment:
Q  165 atacttgctccacacatc--atagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  26829971 atacttgctccacacatcatatagtttgtattggtgtgaa 26829932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 28137265 - 28137233
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||| |||||||||||||||||||||    
T  28137265 ttgctccacacgtcatagtttgtattggtgtga 28137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 33160205 - 33160177
Alignment:
Q  169 ttgctccacacatcatagtttgtattggt 197  Q
    |||||||||||||||||||||||||||||    
T  33160205 ttgctccacacatcatagtttgtattggt 33160177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5729 - 5633
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5729 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2538 - 2442
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  ||||| |||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2538 tctcccccagattaggtcatattggagcgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 2442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 775718 - 775622
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||||||||| |||| | |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  775718 tctcccccagattaggtcatattggaccgaattgggtcaacaat-cttgatgtgtttgttcctttctttcattgcttatctttattgctttgattatg 775622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13598444 - 13598348
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13598444 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 13598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19072974 - 19072877
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| |  ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  19072974 tctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatg 19072877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19120864 - 19120767
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| |  ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  19120864 tctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatg 19120767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29651857 - 29651761
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| || | | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  29651857 tctcccccagattaggtcatattggaccgaactgggtcaaaaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 29651761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13547131 - 13547079
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13547131 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 13547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13549042 - 13548990
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13549042 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 13548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37168424 - 37168476
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37168424 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 37168476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47703987 - 47704081
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgatta 96  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  47703987 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgttttttcctttctttcattgcttatctttattgctttgatta 47704081  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 47098875 - 47098970
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattat 97  Q
    ||||| ||||| | |||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  47098875 tctcccccagattcggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttgattgcttatctttattgctttgattat 47098970  T

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Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 47102904 - 47102987
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattat 97  Q
    |||||||  |||||||||| ||||| |||| || ||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  47102904 taggtcatattggaccgaactgggtcaacaatt-ttggtgtgtttgttcctttctttgattgcttatctttattgctttgattat 47102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 9476295 - 9476211
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  9476295 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgtttatcttttttgctttgattatg 9476211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 27104466 - 27104519
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  27104466 tcttggtgtgtttgttcctttatttcattgcttatctttattgctttgattatg 27104519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 193741 - 193789
Alignment:
Q  5 ctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  193741 ctccagagtatgtcaagttggaccgaactgggtgaacatttcttggtgt 193789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11348824 - 11348872
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttg 49  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  11348824 tctcctccagagtaggtcaagttggaccgaactgagtgaacatttcttg 11348872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31925749 - 31925697
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  31925749 tctcctctagagtaggtcaagttggaccgaactaggtgaacatttcttggtgt 31925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16124567 - 16124664
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtaccttt-ctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| || || |||| | |||||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  16124567 tctcccccagattaggtcatattggaccgaactgagtcaacaat-cttggtgtgtttgttccttttctttcatagcttatctttattgctttgattatg 16124664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28242430 - 28242483
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  28242430 tctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 28242483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47255382 - 47255329
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  47255382 tctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 47255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29136373 - 29136425
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtg 52  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  29136373 tctcctccagagtaggtcaagtttggaccgaactaggtgaacatttcttggtg 29136425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37876808 - 37876756
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  37876808 tctcctccagagtacatcaagttgaaccgaactgggtgaacatttcttggtgt 37876756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8550829 - 8550770
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  8550829 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 8550770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26644948 - 26645031
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | | ||||||||||||| ||||||||||||||| |||||||    
T  26644948 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatcttt 26645031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 50521199 - 50521250
Alignment:
Q  47 ttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  50521199 ttggtgtgtttgttcctttctttcattgtttctctttattgctttgattatg 50521250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 834209 - 834151
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  834209 tctcccccagagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 834151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7482272 - 7482222
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggt 51  Q
    |||||| |||||||||||||||||||||||| | |||||||||||| ||||    
T  7482272 tctccttcagagtaggtcaagttggaccgaactaggtgaacatttcatggt 7482222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15820433 - 15820491
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||| ||||||||||||||||||||| |||| | ||| ||||||| |||||||||||||    
T  15820433 tctcatccagagtaggtcaagttggatcgaactaggtaaacatttattggtgtgtttgt 15820491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36683806 - 36683864
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||| ||||||| || || ||||| |||||||||||||||    
T  36683806 tctcccccagagtaggtcaagttagaccgaactgagtaaacatctcttggtgtgtttgt 36683864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 834024 - 833974
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  834024 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 833974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 8550638 - 8550588
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  8550638 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 8550588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 19754783 - 19754820
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19754783 atacttgctccacacatcatagtttctattggtgtgaa 19754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 42297827 - 42297786
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaagttt 206  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  42297827 atactttctccacacatcatagtttggattggtgtgaagttt 42297786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20622279 - 20622219
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  20622279 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 20622219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 20762982 - 20763014
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  20762982 ttgctccacacatcatagtttgtattggtgtga 20763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 28220077 - 28220030
Alignment:
Q  173 tccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  28220077 tccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 28220030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 28223276 - 28223225
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||| || ||||||| |||| |||||||    
T  28223276 ttgctccacacatcatagtttgtattggtctg-agttttgagtccgaattcac 28223225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40282503 - 40282563
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  40282503 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 40282563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 49918664 - 49918696
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  49918664 ttgctccacacatcatagtttgtattggtgtga 49918696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 928007 - 927960
Alignment:
Q  12 gtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||||||||    
T  928007 gtaggtcaagttagaccgaactgggtaaacatttctttgtgtgtttgt 927960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3189456 - 3189515
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||| |||||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  3189456 tctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 3189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3198273 - 3198332
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||| |||||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  3198273 tctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 3198332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3207112 - 3207171
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||| |||||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  3207112 tctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 3207171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 4552672 - 4552621
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  4552672 cagagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 4552621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28220268 - 28220201
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  28220268 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgtccctctctt 28220201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8871104 - 8871046
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||| |||||| ||||||||||||||||| || ||||||| ||||| |||||||    
T  8871104 tctcccccatagtaggccaagttggaccgaattgagtaaacatttattggtatgtttgt 8871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9987327 - 9987369
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  9987327 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9987369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13316394 - 13316352
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  13316394 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 13316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28265596 - 28265538
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  28265596 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 28265538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 196
Target Start/End: Original strand, 29136566 - 29136596
Alignment:
Q  166 tacttgctccacacatcatagtttgtattgg 196  Q
    |||||||||||||||||||||||||||||||    
T  29136566 tacttgctccacacatcatagtttgtattgg 29136596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34603703 - 34603733
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaa 31  Q
    |||||||||||||||||||||||||||||||    
T  34603703 tctcctccagagtaggtcaagttggaccgaa 34603733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 37503413 - 37503366
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  37503413 ctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 37503366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44203758 - 44203800
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  44203758 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 44203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46065044 - 46065102
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| |||||||||||||||||||| |||| ||||| |||| |  |||||||||||||    
T  46065044 tctcccccagagtaggtcaagttggatcgaactgggtaaacaatctttggtgtgtttgt 46065102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 196764 - 196731
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||| ||||||||||||||||    
T  196764 ttgctccacacatcataatttgtattggtgtgaa 196731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3189658 - 3189708
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||| |||||||||||| |||||||||||  |||||||||| |||||||    
T  3189658 ttgctccagacatcatagtttatattggtgtga--ttttgtgtccgaattcac 3189708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3198475 - 3198525
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||| |||||||||||| |||||||||||  |||||||||| |||||||    
T  3198475 ttgctccagacatcatagtttatattggtgtga--ttttgtgtccgaattcac 3198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3207314 - 3207364
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||| |||||||||||| |||||||||||  |||||||||| |||||||    
T  3207314 ttgctccagacatcatagtttatattggtgtga--ttttgtgtccgaattcac 3207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 13137835 - 13137787
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaatt 218  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||| ||||    
T  13137835 ttgctccacacatcataatttgtattggtgtg-agttttgagtccgaatt 13137787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 19752973 - 19753010
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  19752973 atacttgcttcgcacatcatagtttgtattggtgtgaa 19753010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 28265410 - 28265381
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||    
T  28265410 ctccacacatcatagtttgtattggtgtga 28265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 32889442 - 32889389
Alignment:
Q  45 tcttggtgtgtttgtacctttcttt-cattgcatatctttattgctttgattat 97  Q
    ||||||||||||||| ||| ||||| |||||| |||||||||||||||| ||||    
T  32889442 tcttggtgtgtttgttcctctcttttcattgcttatctttattgctttggttat 32889389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 40122055 - 40122005
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||| |||||||    
T  40122055 ttgctccacgcatcatagtttgtattggtgtga--ttttgagtccgaattcac 40122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 45644212 - 45644162
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||| ||||||  ||||| |||| |||||||    
T  45644212 ttgctccacacatcatagtttgtatttgtgtga--ttttgagtccgaattcac 45644162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 47115302 - 47115347
Alignment:
Q  5 ctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttg 49  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||    
T  47115302 ctccagagtaggtcattgttggaccgaactgggtgaacatttcttg 47115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 47255191 - 47255154
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  47255191 atacctgctccacacatcatagtttatattggtgtgaa 47255154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9036542 - 9036602
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||| ||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  9036542 tctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 9036602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 13548854 - 13548815
Alignment:
Q  165 atacttgctccacacatc--atagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  13548854 atacttgctccacacatcatatagtttgtattggtgtgaa 13548815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 19754628 - 19754676
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtt 56  Q
    |||| ||||||||||||||||||| ||||| |||| || ||||||||||    
T  19754628 cagattaggtcaagttggaccgaagtgggtcaacaatttttggtgtgtt 19754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21054084 - 21054144
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||| | || ||||||||| |||||    
T  21054084 tctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgtatttgt 21054144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 23555298 - 23555250
Alignment:
Q  11 agtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||| |||| || || |||||||||||||| ||||||    
T  23555298 agtaggtcaagttggatcgaactgagtaaacatttcttggtgcgtttgt 23555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 37559719 - 37559668
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||| |||||||||||| |||||||||| ||||||| |||| |||||||    
T  37559719 ttgctccagacatcatagtttatattggtgtg-agttttgagtccgaattcac 37559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 37876616 - 37876577
Alignment:
Q  165 atacttgctccacacatc--atagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  37876616 atacttgctccacacatcatatagtttgtattggtgtgaa 37876577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 50167034 - 50167002
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||| |||||||||    
T  50167034 ttgctccacacatcatagtttgttttggtgtga 50167002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 50169069 - 50169037
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||| |||||||||||||||||||||||||||    
T  50169069 ttgcttcacacatcatagtttgtattggtgtga 50169037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 16940281 - 16940356
Alignment:
Q  22 ttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16940281 ttggaccgaattgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 16940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 17010946 - 17011021
Alignment:
Q  22 ttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17010946 ttggaccgaattgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 17011021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20522266 - 20522170
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  20522266 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcatttcttatctttattgctttgattatg 20522170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35446926 - 35446874
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35446926 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 35446874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10445495 - 10445591
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||| | |||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  10445495 tctcccccagattaggtcatattggaccgaactggatcaacaat-cttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatg 10445591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 33528684 - 33528768
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  33528684 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatg 33528768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 21629984 - 21629899
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttga 93  Q
    ||||| |||||||  |||||| ||| ||||| |||| | |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  21629984 ccagattaggtcatattggactgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttga 21629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 33118139 - 33118086
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  33118139 tcttggtgtgtttgttcctttctttcattgcttatctttattactttgattatg 33118086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45727055 - 45727099
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacattt 45  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  45727055 tctcctccagagtaggtcaagttggaccgaactgggtgaacattt 45727099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 6594858 - 6594808
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  6594858 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccaaattcac 6594808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 17865206 - 17865153
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  17865206 tcttggtgtgattgttcctttctttcattgattatctttattgctttgattatg 17865153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 36757819 - 36757896
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||| |||||||  |||||||||||||||| |||| | | ||||||||||||| ||||||||||||||| |||||||    
T  36757819 ccagattaggtcatattggaccgaattgggtcaacaatcttttggtgtgtttgttcctttctttcattgcttatcttt 36757896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1631774 - 1631722
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||| ||||    
T  1631774 tctcctccagagtaggtcaagttggaccgaactgagtgaatatttcttagtgt 1631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 11690801 - 11690852
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  11690801 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 11690852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 31056044 - 31055992
Alignment:
Q  47 ttggtgtgtttgtaccttt-ctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||    
T  31056044 ttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatg 31055992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4503175 - 4503116
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  4503175 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 4503116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36988118 - 36988059
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  36988118 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 36988059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 45099880 - 45099939
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  45099880 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 45099939  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14699058 - 14699131
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgc 75  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| |||||||||||||||    
T  14699058 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgc 14699131  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 723601 - 723551
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  723601 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 723551  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13569374 - 13569279
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| || ||||||||||| | ||||||||||||||  |||||||  |||||||||||||    
T  13569374 tctcccccagattaggtcatattggaccgaactgggtcaacaatt-ttggtgtgtttattcctttctttcattgattatcttt-gtgctttgattatg 13569279  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 34139627 - 34139577
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  34139627 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 34139577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34682385 - 34682481
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| || ||||  |||||||||| ||||| |||| | |||||||||||||| ||| ||||||||||| ||| ||||||  ||||||||||    
T  34682385 tctcccccagattatgtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctctctttcattgcttatatttatttgtttgattatg 34682481  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36205705 - 36205648
Alignment:
Q  3 tcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  36205705 tcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 36205648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 36987929 - 36987879
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  36987929 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 36987879  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 39482934 - 39482881
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||| ||||||||||  |||||||||||||||| |||||    
T  39482934 tcttggtgtgtttgttcctctctttcattgtttatctttattgctttggttatg 39482881  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 42362659 - 42362709
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  42362659 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 42362709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 5723110 - 5723078
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  5723110 ttgctccacacatcatagtttgtattggtgtga 5723078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 36773872 - 36773904
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  36773872 ttgctccacacatcatagtttgtattggtgtga 36773904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1345592 - 1345651
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||| |||||||||||||  |||||||||| ||||| ||| ||||||||||||||||||    
T  1345592 tctcccccagagtaggtcatattggaccgaactgggtcaacaatttcttggtgtgtttgt 1345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2334460 - 2334401
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |  |||||||||||||    
T  2334460 tctcctccagagtaggtcaagtttggaccgaactgggggaacaatctttggtgtgtttgt 2334401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6595048 - 6594989
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |  |||||||||||||    
T  6595048 tctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctttggtgtgtttgt 6594989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 33004267 - 33004208
Alignment:
Q  250 tagagagtagtgatcattacccaagaatcaacatgaagctccactttattaaaaccacaa 309  Q
    ||||||||||||  || ||||||||||||||||||||||| |||| ||||| | ||||||    
T  33004267 tagagagtagtggccactacccaagaatcaacatgaagcttcactctattatagccacaa 33004208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 723786 - 723728
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  723786 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6266817 - 6266859
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6266817 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 11151450 - 11151393
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagt 227  Q
    ||||||||||||||||||||||||||||| || ||||||| || | ||||||| |||||    
T  11151450 ttgctccacacatcatagtttgtattggtatg-agttttgagttcgaattcacaacagt 11151393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11151633 - 11151575
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  11151633 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 11151575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12647428 - 12647386
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  12647428 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 12647386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17057411 - 17057353
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  17057411 tctcccccagactaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 17057353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17085394 - 17085336
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  17085394 tctcccccagactaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 17085336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 23078533 - 23078618
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  ||||| |||| ||||| |||||| | ||||||||||||| || |||||||||||| |||||||  |||||||||||||    
T  23078533 taggtcatattggatcgaactgggtcaacattcttttggtgtgtttgttccattctttcattgcttatcttt-gtgctttgattatg 23078618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32289690 - 32289732
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  32289690 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 32289732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34139812 - 34139754
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  34139812 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 34139754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34388904 - 34388823
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||| ||||| |||||||  |||||||||||||||| ||||  ||| ||||||||||| |||||||||| |||  |||||||    
T  34388904 tctcccccagattaggtcatattggaccgaattgggtcaaca-atctcggtgtgtttgttcctttctttctttgtttatcttt 34388823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 36318043 - 36317993
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  36318043 agagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 36317993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8040106 - 8040010
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||| ||| ||||| |||| | |||| ||| ||| | ||| || |||||||| ||||||||||||||||||||||    
T  8040106 tctcccccagattaggtcatattggactgaactgggtcaacaat-cttgatgtattttttcctctccttcattgcttatctttattgctttgattatg 8040010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 8390213 - 8390296
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| || ||||||||||||| | |||||||||| || |||||||  |||||||||||||    
T  8390213 taggtcattttggaccgaactgggtcaacaatt-ttggtgtgtttgttcatttctttcatcgcttatcttt-gtgctttgattatg 8390296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 24885899 - 24885949
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||| |||||||||||||||||||||||||||  ||||| |||| |||||||    
T  24885899 ttgctacacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 24885949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 29868182 - 29868215
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||| ||||||    
T  29868182 ttgctccacacatcatagtttgtattgctgtgaa 29868215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 33162308 - 33162258
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||| |||||  ||||| |||| |||||||    
T  33162308 ttgctccacacatcatagtttgtattgatgtga--ttttgagtccgaattcac 33162258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33648298 - 33648351
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| ||||| ||||||| |||||||    
T  33648298 tctcctccagagtaggtcattgttggaccgaactgggtaaacatttattggtgt 33648351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 36317861 - 36317817
Alignment:
Q  176 acacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  36317861 acacatcattgtttgtattggtgtg-agttttgagtccaaattcac 36317817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 2334272 - 2334240
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||| |||||||||||||||||||||||||||    
T  2334272 ttgcttcacacatcatagtttgtattggtgtga 2334240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7451244 - 7451295
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| | |||||||||||||||| |||| ||||||||||||| |||||||    
T  7451244 tctcctctacagtaggtcaagttgga-cgaactgggtgaacatttattggtgt 7451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 14633682 - 14633650
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||| |||||||||||||||||||||||||||    
T  14633682 ttgcttcacacatcatagtttgtattggtgtga 14633650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 36205519 - 36205487
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||| ||||||    
T  36205519 ttgctccacacatcatagtttgtattagtgtga 36205487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 45727245 - 45727284
Alignment:
Q  165 atacttgctccacacatc--atagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  45727245 atacttgctccacacatcatatagtttgtattggtgtgaa 45727284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9765870 - 9765967
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| |  ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  9765870 tctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttcattgcttatctttattgctttgattatg 9765967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23799628 - 23799724
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||| | |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  23799628 tctcctccaaattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctctattgctttgattatg 23799724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42435033 - 42434981
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42435033 tctcctccagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 42434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4696647 - 4696743
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  ||||| |||| ||||| |||| | |||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  4696647 tctcccccagattaggtcatattggatcgaactgggtcaacaat-cttggtgtgtttgttcatttctttcattgcttatctttattgctttgattatg 4696743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4283653 - 4283702
Alignment:
Q  4 cctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  4283653 cctctagagtaggtcaagttggaccgaactgggtgaacatttcttggtgt 4283702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26403281 - 26403377
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  26403281 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctcgttttcattgcttatctttattgctttgattatg 26403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 1292500 - 1292448
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  1292500 ccagagtaggtcaagttggaccgaactgggcaaacatttcttggtgtgtttgt 1292448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 6813708 - 6813632
Alignment:
Q  22 ttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||| ||||| |||| |  ||||| ||||||| ||||||||||||| | ||||||||||||||||||||||    
T  6813708 ttggaccgaactgggttaacaatctttggtatgtttgttcctttctttcatttcttatctttattgctttgattatg 6813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11384111 - 11384163
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  11384111 tctcctccagagtaggttaagttggaccgaactgggtgaacattttttggtgt 11384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18655526 - 18655578
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  18655526 tctcctccaaagtaggtcaagttggaccgaactgggtgaacattttttggtgt 18655578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 15213100 - 15213151
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  15213100 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 15213151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17982779 - 17982838
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  17982779 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 17982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31218383 - 31218442
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  31218383 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 31218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42498320 - 42498379
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  42498320 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 42498379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43036549 - 43036616
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||||||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  43036549 tctcctccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctctt 43036616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 4162630 - 4162668
Alignment:
Q  9 agagtaggtcaagttggaccgaattgggtgaacatttct 47  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4162630 agagtaggtcaagttggaccgaattgggtaaacatttct 4162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 10015209 - 10015263
Alignment:
Q  5 ctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||||||||||||||| ||||| | ||||||||||||| |||||    
T  10015209 ctccatagtaggtcaagttggaccgaactgggtaatcatttcttggtgtatttgt 10015263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 5702546 - 5702630
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | |||||||||||||| |||||| ||||| || ||||| ||||||||| ||||||    
T  5702546 taggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttccttcatagcttatctctattgctttaattatg 5702630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 19752488 - 19752541
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||| ||||||||| | ||||| ||||||||||||||||    
T  19752488 tcttggtgtgtttgttcctctctttcattacttatctctattgctttgattatg 19752541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 41366472 - 41366422
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  41366472 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 41366422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 3303525 - 3303493
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  3303525 ttgctccacacatcatagtttgtattggtgtga 3303493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 5689581 - 5689613
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  5689581 ttgctccacacatcatagtttgtattggtgtga 5689613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 17982967 - 17982999
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  17982967 ttgctccacacatcatagtttgtattggtgtga 17982999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 30143654 - 30143686
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  30143654 ttgctccacacatcatagtttgtattggtgtga 30143686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1746261 - 1746202
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  1746261 tctcctccatagtaggtcaagtttggaccgaactgggtgaacaatcgttggtgtgtttgt 1746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4731784 - 4731851
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| | ||||||||||||||||||||||| |||| |  ||||||||||||| ||| ||||    
T  4731784 tctcccccagattcggtcaagttggaccgaattgggtcaacaatctttggtgtgtttgttcctctctt 4731851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4733832 - 4733899
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  4733832 tctcccccagattaggtcaagttggaccgaactgggtcaacagtctttggtgtgtttgttcctctctt 4733899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15212912 - 15212979
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  15212912 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctctt 15212979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 34254185 - 34254154
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtg 200  Q
    ||||||||||||||||||||||||||||||||    
T  34254185 ttgctccacacatcatagtttgtattggtgtg 34254154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34254373 - 34254314
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||| ||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  34254373 tctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 34254314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 34256361 - 34256330
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtg 200  Q
    ||||||||||||||||||||||||||||||||    
T  34256361 ttgctccacacatcatagtttgtattggtgtg 34256330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34256549 - 34256490
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||| ||||||||||||||| |||||||| |||||||||| |  |||||||||||||    
T  34256549 tctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 34256490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 43036736 - 43036786
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattca 220  Q
    ||||||||||||||||  |||||||||||||| ||||||| |||||||||||    
T  43036736 ttgctccacacatcattttttgtattggtgtg-agttttgagtccaaattca 43036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3303712 - 3303654
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||| ||||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  3303712 tctcccccacagtaggtcaagttggaccgaactgggtaaacaatctttggtgtgtttgt 3303654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4743256 - 4743198
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||| ||||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  4743256 tctcccccaaagtaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 4743198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 8965721 - 8965675
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||| ||||| ||||||| | |||||||||||    
T  8965721 taggtcaagttggaccgaactgggtaaacatttatcggtgtgtttgt 8965675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25690080 - 25690122
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  25690080 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 6127255 - 6127170
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| || || |||| |  ||| ||||||||| | | ||||||||||| |||||||| |||||||||||||    
T  6127255 taggtcatattggaccgaactgagtcaacaatatttgatgtgtttgttcatctctttcattgcttatctttagtgctttgattatg 6127170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 6599279 - 6599329
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||| |||||||    
T  6599279 ttgctctacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 6599329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 6674732 - 6674782
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||| ||||||||||||||||||||||||||  ||||| |||| |||||||    
T  6674732 ttgctctacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 6674782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 8153891 - 8153940
Alignment:
Q  8 cagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    |||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  8153891 cagagtaggtcaagttggaccgaaatggataaatattttttggtgtgttt 8153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10930241 - 10930188
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaac-atttcttggtgt 53  Q
    ||||| ||||| ||||||||||||||||||| ||||| ||| ||||||||||||    
T  10930241 tctcccccagattaggtcaagttggaccgaactgggtcaacaatttcttggtgt 10930188  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 12702485 - 12702435
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||| |||||  ||||| |||| |||||||    
T  12702485 ttgctccacacatcatagtttgtattgatgtga--ttttgagtccgaattcac 12702435  T

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Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 42006170 - 42006207
Alignment:
Q  269 cccaagaatcaacatgaagctccactttattaaaacca 306  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  42006170 cccaagaatcaatatgaagctccactttatgaaaacca 42006207  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2627862 - 2627902
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaa 40  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  2627862 tctcctccagagtaggtcaagtttggaccgaactgggtgaa 2627902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 3073906 - 3073858
Alignment:
Q  11 agtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||| ||||| ||||| |||||||||  ||||||||||    
T  3073906 agtaggtcaagttgggccgaactgggtaaacatttctatgtgtgtttgt 3073858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 4456027 - 4455991
Alignment:
Q  47 ttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  4456027 ttggtgtgtttgttcctttctttcattgcttatcttt 4455991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 4731972 - 4732004
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||| ||||||||||||||||    
T  4731972 ttgctccacacatcattgtttgtattggtgtga 4732004  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 4743082 - 4743050
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||| |||||||||||||||||||    
T  4743082 ttgctccacacattatagtttgtattggtgtga 4743050  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 19945213 - 19945181
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||| |||||||||||||||||    
T  19945213 ttgctccacacatcaaagtttgtattggtgtga 19945181  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27811404 - 27811460
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||    
T  27811404 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgttt 27811460  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 31218571 - 31218603
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||| |||||||||||    
T  31218571 ttgctccacacatcatagtttatattggtgtga 31218603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 42498509 - 42498541
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||| |||||||||||||||    
T  42498509 ttgctccacacatcatattttgtattggtgtga 42498541  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 44304169 - 44304201
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||| |||||||||||||    
T  44304169 ttgctccacacatcatagtatgtattggtgtga 44304201  T

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Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10047425 - 10047329
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  10047425 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgtttatctttattgctttgattatg 10047329  T

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Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36315280 - 36315376
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||||| |||||||||||||| ||||||||||||||  ||||| ||||||||||||||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggtcaacatt-cttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatg 36315376  T

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Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36329489 - 36329585
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||||| |||||||||||||| ||||||||||||||  ||||| ||||||||||||||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggtcaacatt-cttggtgtgtttgttcctttctttcattgtttatctctattgctttgattatg 36329585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39246040 - 39245944
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  39246040 tctcccccagattaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgttttgattatg 39245944  T

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Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6656082 - 6656134
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6656082 tctcatccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 6656134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 42599646 - 42599721
Alignment:
Q  22 ttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||| ||||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  42599646 ttggactgaattgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattgctttgattatg 42599721  T

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Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 54867224 - 54867134
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| |||||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  54867224 ccagactaggtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatctttattactttgattatg 54867134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8648265 - 8648317
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  8648265 tctcctccagagtaggtcaagttggaccaaactgggtgaacatttcttggtgt 8648317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 24969797 - 24969849
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  24969797 ccagagtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgt 24969849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41639552 - 41639604
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  41639552 tctcctccagagtaggtcaagttggaccgaactgagtgaacatttcttggtgt 41639604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41964542 - 41964594
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  41964542 tctcctccagagtaggtcaagttggaccgaactgggtgagcatttcttggtgt 41964594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 50673889 - 50673837
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  50673889 tctcctccagagtaggtcaagttggaccgaactaggtgaacatttcttggtgt 50673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6542221 - 6542163
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  6542221 tctcccccagggtaggtcaagttggaccgaactgggtaaacatttcttggtgtgtttgt 6542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 3796582 - 3796667
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||| ||| ||||| |||| |  ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  3796582 taggtcatattggacggaactgggtcaacaatctttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatg 3796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 24333812 - 24333759
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  24333812 tcttggtgtgtttgtttctttctttcattgcttatctttattgctttgattatg 24333759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 25862116 - 25862169
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  25862116 tcttggtgtgtttattcctttctttcattgcttatctttattgctttgattatg 25862169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46703627 - 46703680
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  46703627 tctcctccagagtaggtcattgttggaccgaattgggtgaacatttcttggtgt 46703680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31474277 - 31474335
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||    
T  31474277 tctccaccagagtagatcaagttggaccgaactgggtaaacatatcttggtgtgtttgt 31474335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 2210036 - 2210073
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2210036 atacttgctccacacatcatagtttgtattggtgtgaa 2210073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 5147711 - 5147627
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||| | || ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  5147711 taggtcatattggaccgaactgggtcaacaat-ctcggtgtgtttgttcctttctttcattgcttatctctattgttttgattatg 5147627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5269242 - 5269338
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| | ||| |||| | |||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||    
T  5269242 tctcccccagattaggtcatattggaccgaactaggtcaacaat-cttgttgtgtttgttcctttctttcatttcttatatttattgctttgattatg 5269338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38152490 - 38152585
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| || ||||  |||||||||| ||||| |||| | |||||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  38152490 tctcccccagattatgtcatattggaccgaactgggtcaacaat-cttggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 38152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 50262546 - 50262509
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50262546 atacttgctccacacatcatagtttgtattggtgtgaa 50262509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8665534 - 8665586
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||||||||||| || | |||| ||||||||||||||    
T  8665534 tctcctccagagtaggtcaagttggaccaaactaggtgtacatttcttggtgt 8665586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 26175491 - 26175440
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  26175491 ttgctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 26175440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5396722 - 5396805
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatcttt 83  Q
    ||||||||||| |||||||  |||||||||| ||||| |||| | | ||||||||||| | ||||||||||||||| |||||||    
T  5396722 tctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttcttcctttctttcattgcttatcttt 5396805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 56178679 - 56178620
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  56178679 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgt 56178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 51337202 - 51337248
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  51337202 taggtcaagttggaccgaactgggtaaacatttcgtggtgtgtttgt 51337248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 379506 - 379559
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||||||||||||  ||||||||||| ||| |||||||||||||||||    
T  379506 tctcctccagagtaggtcattgttggaccgaactggatgaacatttcttggtgt 379559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3777595 - 3777500
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||| ||| ||||| |  |||||||||| ||||| |||| | || ||||||||||| ||||||||||||||| |||||||  |||||||||||||    
T  3777595 tctcctctagattaggttatattggaccgaactgggtcaacaat-ctcggtgtgtttgttcctttctttcattgcttatcttt-gtgctttgattatg 3777500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5143305 - 5143209
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||| ||||| |||||||  |||||||||| | ||| |||| | ||  |||||||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  5143305 tctcccccagattaggtcatattggaccgaactaggtcaacaat-ctcagtgtgtttgttcctttctttcattgcttatctctattgttttgattatg 5143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 12739405 - 12739357
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||    
T  12739405 ctccacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 12739357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 21688387 - 21688471
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaaca-tttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatga 99  Q
    ||||||||||| |||||||||| || |||| |||||||||||  || |    |||||||||||| |||||||||||||||||||||||    
T  21688387 taggtcaagttagaccgaattgagtcaacaatttcttggtgttgttatc---ttctttcattgcttatctttattgctttgattatga 21688471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 37740940 - 37740996
Alignment:
Q  170 tgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagt 227  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| |||| || |||||    
T  37740940 tgctccacacatcatagtttgtattggtgtg-agttttgagtccgaatttacaacagt 37740996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 41639742 - 41639779
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  41639742 atacttgctccacacatcatagtttgtattgatgtgaa 41639779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 47038266 - 47038220
Alignment:
Q  173 tccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  47038266 tccacacatcatagtttgtattggtgtga--ttttgagtccaaattcac 47038220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 48893497 - 48893447
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  48893497 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 48893447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 56178490 - 56178440
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||||||||||||||||||  ||||| |||| |||||||    
T  56178490 ttgctccacacatcatagtttgtattggtgtga--ttttgagtccgaattcac 56178440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 5207878 - 5207830
Alignment:
Q  7 ccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgt 55  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||||    
T  5207878 ccagagtaggtcaatttggactgaattgggtaaacatttattggtgtgt 5207830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 12743783 - 12743732
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||| |||||||    
T  12743783 ttgctccacacaacatagtttgtattggtgtg-agttttgagtccgaattcac 12743732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 29999683 - 29999651
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  29999683 ttgctccacacatcatagtttgtattggtgtga 29999651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29999848 - 29999804
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatt 44  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  29999848 tctcctccagagtaggtcaagtttggaccgaactgggtgaacatt 29999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31495358 - 31495298
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  31495358 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgt 31495298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35662567 - 35662619
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| ||||||||||||||||||||||| ||  ||||||||| |||||||    
T  35662567 tctcctcaagagtaggtcaagttggaccgaactgaatgaacattttttggtgt 35662619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 37229753 - 37229705
Alignment:
Q  11 agtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| | ||| |||||||||||| ||||||||    
T  37229753 agtaggtcaagttggaccgaactaggtaaacatttcttggcgtgtttgt 37229705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40632571 - 40632623
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| | |||| |||||||||||||||| ||||| |||||||||||||||    
T  40632571 tctcctctaaagtaagtcaagttggaccgaactgggtaaacatttcttggtgt 40632623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 48143362 - 48143394
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||||||||||    
T  48143362 ttgctccacacatcatagtttgtattggtgtga 48143394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 52467212 - 52467161
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||| |||||||    
T  52467212 ttgcttcacacatcatagtttgtattggtgtg-agttttgagtccgaattcac 52467161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 6743478 - 6743562
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttat-tgctttgattatg 98  Q
    |||||||  |||||||||| ||||| |||||  |||||||||||||| |||||||| |||| | ||||| ||| |||||||||||||    
T  6743478 taggtcatattggaccgaactgggtcaacat--cttggtgtgtttgttcctttcttccatttcttatctctatatgctttgattatg 6743562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12739592 - 12739525
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  12739592 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctctt 12739525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13992335 - 13992276
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| | |||||||| |  |||||||||||||    
T  13992335 tctcctccagagtaggtcaagtttggaccgaactaggtgaacaatctttggtgtgtttgt 13992276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16623344 - 16623426
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacc-tttctttcattgcatatcttt 83  Q
    ||||||||||| |||||||  ||| |||||| ||||| ||||  ||||||||||||||| || ||||||||||||| |||||||    
T  16623344 tctcctccagattaggtcatattgaaccgaactgggtcaaca-atcttggtgtgtttgttccttttctttcattgcttatcttt 16623426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26175678 - 26175611
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| ||||    
T  26175678 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctctt 26175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48143169 - 48143228
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| ||||||| || |||||||||| |  |||||||||||||    
T  48143169 tctcctccagagtaggtcaagtttggaccaaactgggtgaacaatctttggtgtgtttgt 48143228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52082706 - 52082647
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| || |||||| ||||||||||| |  |||||||||||||    
T  52082706 tctcctccagagtaggtcaagtttagaccgatttgggtgaacaatctttggtgtgtttgt 52082647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52095404 - 52095346
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||||| |||||| |||||||| |||||||||| || |||||||||||||    
T  52095404 tctcctccagagtagg-caagtttggaccgaactgggtgaacaatttttggtgtgtttgt 52095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8393520 - 8393562
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  8393520 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8395729 - 8395771
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  8395729 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 8395771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 21688560 - 21688594
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgt 199  Q
    |||||||||||||||||||||||||||||| ||||    
T  21688560 atacttgctccacacatcatagtttgtattagtgt 21688594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47038453 - 47038395
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| |||||||| |||||||||||||||| ||||| |||| |  |||||||||||||    
T  47038453 tctcccccagagtaagtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 47038395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 48893680 - 48893622
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| |  |||||||||||||    
T  48893680 tctcccccagattaggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgt 48893622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 5350040 - 5350093
Alignment:
Q  7 ccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    |||||||||||||  ||||||| ||||||||| ||||||| |||||||||||||    
T  5350040 ccagagtaggtcattgttggactgaattgggtaaacatttattggtgtgtttgt 5350093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Complemental strand, 5369933 - 5369904
Alignment:
Q  172 ctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||||||||||||    
T  5369933 ctccacacatcatagtttgtattggtgtga 5369904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12073518 - 12073571
Alignment:
Q  1 tctcctccagagtaggtcaa-gttggaccgaattgggtgaacatttcttggtgt 53  Q
    |||| ||||||||||||||  ||||||||||| | |||||||||||||||||||    
T  12073518 tctcttccagagtaggtcattgttggaccgaactaggtgaacatttcttggtgt 12073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 54199762 - 54199704
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcactacagttt 229  Q
    |||||||| ||||||| ||||||||||||||||  ||||| |||| ||||||| |||||||    
T  54199762 ttgctccatacatcatcgtttgtattggtgtga--ttttgagtccgaattcacaacagttt 54199704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54883146 - 54883199
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaac-atttcttggtgt 53  Q
    ||||||||||| || |||||||||||||||| ||||| ||| ||||||||||||    
T  54883146 tctcctccagattaagtcaagttggaccgaactgggtcaacaatttcttggtgt 54883199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9927313 - 9927262
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    ||||||||||||||||||||| |||||||| | ||||||| |||| |||||||    
T  9927313 ttgctccacacatcatagtttatattggtgcg-agttttgagtccgaattcac 9927262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 12743955 - 12743899
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttcttt 69  Q
    ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| |||||    
T  12743955 taggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttt 12743899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 12745344 - 12745288
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttcttt 69  Q
    ||||||||||||||||||| ||||| |||| |  ||||||||||||| ||| |||||    
T  12745344 taggtcaagttggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttt 12745288  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 29254806 - 29254838
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||||||| ||||||    
T  29254806 ttgctccacacatcatagtttgtattagtgtga 29254838  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 34570268 - 34570236
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    ||||||||||||||||||||| |||||||||||    
T  34570268 ttgctccacacatcatagtttatattggtgtga 34570236  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 45687041 - 45687009
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||| ||||||||||||||||||||||||    
T  45687041 ttgctccatacatcatagtttgtattggtgtga 45687009  T

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Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 46147250 - 46147218
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||||| ||||||||||    
T  46147250 ttgctccacacatcatagtttgcattggtgtga 46147218  T

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Target: scaffold0236 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10615 - 10667
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  10615 tctcctccagagtaggtcaagttggaccgaactgggtaaacatttcttggtgt 10667  T

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Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 10732 - 10679
Alignment:
Q  45 tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  10732 tcttggtgtgtttgttcctctctttcattgcttatctttattgctttgattatg 10679  T

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Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7453 - 7505
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgt 53  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  7453 tctcctctagagtaggttaagttggaccgaactgggtgaacatttcttggtgt 7505  T

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Target: scaffold0466; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 7642 - 7679
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7642 atacttgctccacacatcatagtttgtattggtgtgaa 7679  T

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Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20457 - 20390
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctt 68  Q
    ||||| ||||| ||||||||||||||||||| ||||| |||| || ||||||||||||| ||| ||||    
T  20457 tctcccccagattaggtcaagttggaccgaactgggtcaacaatttttggtgtgtttgttcctctctt 20390  T

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Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 20269 - 20241
Alignment:
Q  169 ttgctccacacatcatagtttgtattggt 197  Q
    |||||||||||||||||||||||||||||    
T  20269 ttgctccacacatcatagtttgtattggt 20241  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 434659 - 434718
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||||    
T  434659 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatatttggtgtgtttgt 434718  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 434848 - 434880
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||| ||||||||||||    
T  434848 ttgctccacacatcatagttcgtattggtgtga 434880  T

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Target: scaffold1519 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1041 - 1098
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgttt 57  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  |||||||||||    
T  1041 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgttt 1098  T

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Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 17297 - 17213
Alignment:
Q  13 taggtcaagttggaccgaattgggtgaacatttcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattatg 98  Q
    |||||||  ||| |||||| ||||| |||| || ||||||||||||  ||||||||||||| | ||||||||||||||| ||||||    
T  17297 taggtcatattgaaccgaactgggtcaacaatt-ttggtgtgtttgctcctttctttcatttcttatctttattgctttaattatg 17213  T

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Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 17853 - 17816
Alignment:
Q  165 atacttgctccacacatcatagtttgtattggtgtgaa 202  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  17853 atacttgctacacacatcatagtttgtattggtgtgaa 17816  T

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Target: scaffold0176; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18046 - 17993
Alignment:
Q  1 tctcctccagagtaggtcaagtt-ggaccgaattgggtgaacatttcttggtgt 53  Q
    |||||||||| |||||||||||| ||| |||| |||||||||||||||||||||    
T  18046 tctcctccagggtaggtcaagtttggatcgaactgggtgaacatttcttggtgt 17993  T

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Target: scaffold1668 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 1356 - 1305
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtgaagttttgtgtccaaattcac 221  Q
    |||||||||||||||||| ||||||||||||| |||||||||| | |||||||    
T  1356 ttgctccacacatcatagattgtattggtgtg-agttttgtgttcgaattcac 1305  T

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Target: scaffold0286 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11683 - 11743
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaac-atttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||||| |||||    
T  11683 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgt 11743  T

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Target: scaffold0286; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 11880 - 11912
Alignment:
Q  169 ttgctccacacatcatagtttgtattggtgtga 201  Q
    |||||||||||||||||||| ||||||||||||    
T  11880 ttgctccacacatcatagttcgtattggtgtga 11912  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8777 - 8718
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||||||| |||||    
T  8777 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgt 8718  T

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Target: scaffold0491; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11203 - 11144
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaacatttcttggtgtgtttgt 59  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |  ||||||| |||||    
T  11203 tctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgt 11144  T

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Target: scaffold0565 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2646 - 2604
Alignment:
Q  1 tctcctccagagtaggtcaag-ttggaccgaattgggtgaaca 42  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  2646 tctcctccagagtaggtcaagtttggaccgaactgggtgaaca 2604  T

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Target: scaffold0140 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8470 - 8566
Alignment:
Q  1 tctcctccagagtaggtcaagttggaccgaattgggtgaacatt-tcttggtgtgtttgtacctttctttcattgcatatctttattgctttgattat 97  Q
    ||||| ||||| |||||||  |||||||||| ||||| |||| | | |||||||||||||  ||| |||||||||| ||||||||||| |||| ||||    
T  8470 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttctt-ctttcattgcttatctttattgttttggttat 8566  T

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